View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10191_low_15 (Length: 324)
Name: NF10191_low_15
Description: NF10191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10191_low_15 |
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Alignment Details
Target: chr1 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 13 - 309
Target Start/End: Complemental strand, 27784707 - 27784415
Alignment:
| Q |
13 |
tactgtattcaccgcacatactgagataacatagattccttccttgagcaccaagagatgggtgatttttcaaacagaaataggtagcctttaatgaatt |
112 |
Q |
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| T |
27784707 |
tactgcattcatcgcacatacagagataacatagattccttccttgagcaccaatagatgggtgatttttcaaacagaaataggtagcctttaatgaatt |
27784608 |
T |
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| Q |
113 |
tttgtcatccttgtcactacaccaatttgagtcagtgtagccaacaagtttgcagcttcttctattgtcaattgttggaaatatgatcacca-aaaactc |
211 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
27784607 |
tttgtcatccttgtcact-----aatttgagtcagtgtagccaacaagtttgcagcttcttctattgtcaattgttggaaatatgatcaccaccaaactc |
27784513 |
T |
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| Q |
212 |
caatgtacctctaatgtatcttaggatcttctttgttgcttctatataaaatgtttttgtcttttccttgaatcttatgtaaagccctacaatgtatg |
309 |
Q |
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||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
27784512 |
caatgcacctctaatgtatcttaggatcttctttgttgcatctatataaaatgtttttgtcttttcattgaatcttatgtaaagccctacaatgtatg |
27784415 |
T |
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