View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10191_low_21 (Length: 255)
Name: NF10191_low_21
Description: NF10191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10191_low_21 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 19 - 255
Target Start/End: Original strand, 8576990 - 8577226
Alignment:
| Q |
19 |
tcataatgaaaaatgtcatctacttacatgggttcaaccaaactatcatgacagactgagaaactcaattttcatgtcaaagttccaagatttatacgat |
118 |
Q |
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| T |
8576990 |
tcataatgaaaaatgtcatctacttacatgggctcaaccaaactatcatgacagactaagaaactcaattttcatgtcaaagttccaagatttatacgat |
8577089 |
T |
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| Q |
119 |
gaattcaagatcaagttaaactttgtctcacctgagcaccctcaaacaaatgtgcaggtcgaatctacgaacaatgcaccatttgcgagttacaaaagat |
218 |
Q |
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| T |
8577090 |
gaactcaagatcaagttaaactttgtctcacttgagcaccctcaaacaaatgtgcaggtcgaatctacgaacaatgcaccatttgcgggttacaaaagat |
8577189 |
T |
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| Q |
219 |
atttgacgagacataagaagaatgggatgatgatcta |
255 |
Q |
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| T |
8577190 |
atttgacgagacataagaagaatgggatgaagatcta |
8577226 |
T |
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