View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10191_low_6 (Length: 405)
Name: NF10191_low_6
Description: NF10191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10191_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 368; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 368; E-Value: 0
Query Start/End: Original strand, 1 - 389
Target Start/End: Original strand, 33303380 - 33303770
Alignment:
| Q |
1 |
tactaatgtcataggtgttactgttactcactagtctaactgaatcatcataatctatagttgattatacttaaaagttatttgta--ctctaataatat |
98 |
Q |
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|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
33303380 |
tactaatgtcatcgttgttactgttactcactagtctaactgaatcatcataatctatagttgattatacttaaaagttatttgtattctctaataatat |
33303479 |
T |
|
| Q |
99 |
accagtgaaaactacacttcaatatacaccaacattttttggcaacttcatagttacacttcaatataacatgtgctttctttgacggcaattagaccaa |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
33303480 |
accagtgaaaactacacttcaatatacaccaacattttttggcaacttcatagttacacttcaatataacatgtgctttctttgacggaaattagaccaa |
33303579 |
T |
|
| Q |
199 |
gattgtcattgttacatatgatacagtcaactcattcaaccatggtggaattatatttcttcctctatagtctagtggttaagaaaacatagtgttacat |
298 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33303580 |
gattgtcattgttacatatgatacagtcaactcattcaaccatggtggaattatatttcttcctctatagtctagtggttaagaaaacatagtgttacat |
33303679 |
T |
|
| Q |
299 |
agttagtaagtaagaaagaatgaacacattattattacccaaaagatcggttttgcttttgttttccatcctcttattcataattgtcgtt |
389 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33303680 |
agttagtaagtaagaaagaatgaacacattattattacccaaaagatcggttttgcttttgttttccatcctcttattcataattgtcgtt |
33303770 |
T |
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