View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10191_low_7 (Length: 403)
Name: NF10191_low_7
Description: NF10191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10191_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 50 - 388
Target Start/End: Complemental strand, 402069 - 401731
Alignment:
| Q |
50 |
atggtgtgctgggaggctgctaacccaaacaattggtttctgtgtttgaagggtgttggaagaccnnnnnnnnctctctcaattgcttgaagccggctgg |
149 |
Q |
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| T |
402069 |
atggtgtgctgggaggctgctaacccaaacaattggtttctgtgtttgaagggtgttggaagaccaaaaaaaactctctcaattgcttgaagccggctgg |
401970 |
T |
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| Q |
150 |
tttaactgggaataaaatcgagattgtatttatgagatgccagaataaatatttgctggttttcggagatttcattcaacgaaacattataggtctcaat |
249 |
Q |
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|||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
401969 |
tttaactgtggataaaatcgagattgtatttatgagatgccagaataaatatttgctggttttcggagatttcattcaacgaaacattataggtctcaat |
401870 |
T |
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| Q |
250 |
cttcgaaccctttcaggtggaacaaacctctgaagtcttgccaatatagcgcctatggctatgggatgtggctgttgtgctggaatgggagagggctgtg |
349 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
401869 |
cttcgaaccctttcagatggaacaaacctctgaagtcttgccaatatagcgcctatggctatgggatgtggctgttgtgctggaatgggagagggctgtg |
401770 |
T |
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| Q |
350 |
atgtcctatattcagtttcatatctgtgacaactgatgt |
388 |
Q |
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| T |
401769 |
atgtcctatattcagtttcatatctgtgacaactgatgt |
401731 |
T |
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