View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10192_1 (Length: 375)
Name: NF10192_1
Description: NF10192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10192_1 |
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Alignment Details
Target: chr7 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 30 - 357
Target Start/End: Complemental strand, 44851789 - 44851472
Alignment:
| Q |
30 |
gtttgtagcatgcgatatatgaacaatacattttgttacattcttctagacaacagacacatnnnnnnnnnncacttgaatcaatcaagaaggggcaaca |
129 |
Q |
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| T |
44851789 |
gtttgtagcatgcgatatatgaacaatacattttgttacattcttctagacaacagacacataaaaaa----------aatcaatcaagaaggggcaaca |
44851700 |
T |
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| Q |
130 |
ggaatcctttcatcagaaaaaatgctcctcgtaaagtgtaaaatagatgaagacataggtaactcctcaagctcatcgaaaaaatcaaattcttctgatt |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44851699 |
ggaatcctttcatcagaaaaaatgctcctcgtaaagtgtaaaatagatgaagacataggtaactcctcaagctcatcgaaaaaatcaaattcttctgatt |
44851600 |
T |
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| Q |
230 |
tagatgctgacatattctttaactgtgcatagcagagtggctcttcctctaagagaagatctattttgtcaatatggcttttttctatatttagtttgaa |
329 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44851599 |
tagatgctgacatattctttaactgtgcatagcagagtggctcttcctctaagagaagatctattttgtcaatatggcttttttctatatttagtttgaa |
44851500 |
T |
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| Q |
330 |
aggatcttcttggtctatgatgatgtcc |
357 |
Q |
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|||||||||||||||||| ||||||||| |
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| T |
44851499 |
aggatcttcttggtctataatgatgtcc |
44851472 |
T |
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