View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10192_low_9 (Length: 240)
Name: NF10192_low_9
Description: NF10192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10192_low_9 |
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Alignment Details
Target: chr5 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 1908555 - 1908336
Alignment:
| Q |
1 |
ttgaatctgagctacatgcccctcttgaggacctatgcttgtctgaacaaagcaatgactctgaggaatacctaacacaaaggactttgtattgggaatc |
100 |
Q |
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| T |
1908555 |
ttgaatctgagctacatgcccctcttgaggacctatgcttgtctgaacaaagcaatgactctgaggaatacctaacacaaaggactttgtattgggaatc |
1908456 |
T |
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| Q |
101 |
tcagatagcacttcttgaggtatatatatgaagatacttttctctttatcattcattcatagtttttctttttgtggttgtatgattaaccaaattaaaa |
200 |
Q |
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| T |
1908455 |
tcagatagcacttcttgaggt----atatgaagatacttttctctttatcattcattcatagtttttctttttgttgttgtttgattaaccaaattaaaa |
1908360 |
T |
|
| Q |
201 |
tcaaatagagccaattaggtttct |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
1908359 |
tcaaatagagccaattaggtttct |
1908336 |
T |
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