View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10193_high_7 (Length: 264)

Name: NF10193_high_7
Description: NF10193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10193_high_7
NF10193_high_7
[»] chr8 (24 HSPs)
chr8 (17-207)||(21239239-21239427)
chr8 (213-264)||(21238050-21238101)
chr8 (215-264)||(40618850-40618899)
chr8 (219-264)||(3673704-3673749)
chr8 (224-264)||(470933-470973)
chr8 (216-264)||(3240644-3240692)
chr8 (219-262)||(24099038-24099081)
chr8 (218-264)||(28086592-28086638)
chr8 (219-264)||(10377937-10377982)
chr8 (219-264)||(15596934-15596979)
chr8 (215-264)||(17693390-17693439)
chr8 (219-264)||(27498147-27498192)
chr8 (219-264)||(30568102-30568147)
chr8 (219-259)||(7883022-7883062)
chr8 (228-264)||(34102530-34102566)
chr8 (225-259)||(27746887-27746921)
chr8 (219-264)||(1236479-1236524)
chr8 (219-264)||(9637190-9637235)
chr8 (219-259)||(14906689-14906729)
chr8 (228-264)||(19443843-19443879)
chr8 (224-264)||(23230906-23230946)
chr8 (21-85)||(30911384-30911448)
chr8 (228-264)||(34610110-34610146)
chr8 (224-264)||(40211086-40211126)
[»] chr6 (24 HSPs)
chr6 (218-264)||(31851663-31851709)
chr6 (217-264)||(31575337-31575384)
chr6 (226-264)||(33052958-33052996)
chr6 (219-264)||(7514986-7515031)
chr6 (219-264)||(31297081-31297126)
chr6 (219-264)||(32327003-32327048)
chr6 (224-264)||(29744497-29744537)
chr6 (224-264)||(32060138-32060178)
chr6 (212-259)||(4984326-4984373)
chr6 (214-264)||(606466-606516)
chr6 (24-78)||(3907554-3907608)
chr6 (219-264)||(3913357-3913402)
chr6 (218-259)||(8497239-8497280)
chr6 (219-264)||(9341434-9341479)
chr6 (219-264)||(12170730-12170775)
chr6 (227-264)||(14174862-14174899)
chr6 (227-264)||(14179398-14179435)
chr6 (219-260)||(19164830-19164871)
chr6 (219-260)||(29319660-29319701)
chr6 (215-264)||(34018822-34018871)
chr6 (219-259)||(3173978-3174018)
chr6 (24-72)||(17149586-17149634)
chr6 (215-259)||(17237048-17237092)
chr6 (219-259)||(23947083-23947123)
[»] chr5 (25 HSPs)
chr5 (219-264)||(10332331-10332376)
chr5 (219-264)||(13007489-13007534)
chr5 (224-264)||(8984777-8984817)
chr5 (219-264)||(6011921-6011966)
chr5 (219-264)||(8087996-8088041)
chr5 (219-264)||(9113508-9113553)
chr5 (219-264)||(38007617-38007662)
chr5 (219-259)||(7886706-7886746)
chr5 (37-85)||(21042668-21042716)
chr5 (228-264)||(27576160-27576196)
chr5 (224-263)||(10723022-10723061)
chr5 (225-264)||(13422192-13422231)
chr5 (225-264)||(14726250-14726289)
chr5 (230-264)||(4771116-4771150)
chr5 (218-264)||(6217158-6217204)
chr5 (217-259)||(21060047-21060089)
chr5 (213-264)||(31391545-31391598)
chr5 (24-78)||(36895438-36895492)
chr5 (219-264)||(26825690-26825735)
chr5 (214-259)||(30371894-30371939)
chr5 (219-264)||(39326670-39326715)
chr5 (219-263)||(177746-177790)
chr5 (228-264)||(7930414-7930450)
chr5 (228-264)||(24229576-24229612)
chr5 (219-259)||(43008081-43008121)
[»] chr4 (35 HSPs)
chr4 (219-264)||(32766795-32766840)
chr4 (224-264)||(9048955-9048995)
chr4 (224-264)||(44596940-44596980)
chr4 (224-259)||(3335935-3335970)
chr4 (219-264)||(4142547-4142592)
chr4 (219-264)||(6154992-6155037)
chr4 (219-264)||(19853295-19853340)
chr4 (219-264)||(40065977-40066022)
chr4 (219-264)||(53444400-53444445)
chr4 (228-264)||(56156440-56156476)
chr4 (217-264)||(17949104-17949151)
chr4 (217-264)||(17952956-17953003)
chr4 (225-264)||(21686031-21686070)
chr4 (219-262)||(36204163-36204206)
chr4 (214-264)||(13634396-13634446)
chr4 (230-264)||(28857681-28857715)
chr4 (103-133)||(48992474-48992504)
chr4 (219-264)||(2521060-2521105)
chr4 (24-77)||(7093390-7093443)
chr4 (219-264)||(10496617-10496662)
chr4 (219-264)||(36162003-36162048)
chr4 (231-264)||(36700504-36700537)
chr4 (227-264)||(51535507-51535543)
chr4 (219-264)||(53811299-53811344)
chr4 (219-259)||(2115354-2115394)
chr4 (216-260)||(9180735-9180779)
chr4 (219-259)||(9284194-9284234)
chr4 (219-259)||(9528643-9528683)
chr4 (23-63)||(19220561-19220601)
chr4 (219-259)||(25274166-25274206)
chr4 (228-264)||(26633463-26633499)
chr4 (219-259)||(38706476-38706516)
chr4 (224-264)||(47320201-47320241)
chr4 (227-259)||(52097690-52097722)
chr4 (228-264)||(56040438-56040474)
[»] chr2 (47 HSPs)
chr2 (23-72)||(8024799-8024848)
chr2 (219-264)||(37876390-37876435)
chr2 (219-264)||(37994554-37994599)
chr2 (224-264)||(41328010-41328050)
chr2 (216-259)||(18763744-18763787)
chr2 (215-262)||(26025258-26025305)
chr2 (219-264)||(4779024-4779069)
chr2 (219-264)||(5427653-5427698)
chr2 (219-264)||(24588005-24588050)
chr2 (219-264)||(29279349-29279394)
chr2 (219-264)||(32448401-32448446)
chr2 (219-264)||(33923976-33924021)
chr2 (216-264)||(31193117-31193165)
chr2 (225-264)||(7646749-7646788)
chr2 (224-259)||(9374334-9374369)
chr2 (213-264)||(11189404-11189454)
chr2 (216-259)||(27248914-27248957)
chr2 (232-263)||(37416992-37417023)
chr2 (217-259)||(4193112-4193154)
chr2 (226-264)||(31788727-31788765)
chr2 (219-261)||(34128457-34128499)
chr2 (225-259)||(36942912-36942946)
chr2 (218-256)||(42017674-42017712)
chr2 (219-264)||(1415828-1415873)
chr2 (219-264)||(4100601-4100646)
chr2 (219-264)||(4903929-4903974)
chr2 (24-85)||(8192481-8192542)
chr2 (219-264)||(10929935-10929980)
chr2 (219-264)||(19062132-19062177)
chr2 (219-264)||(24461710-24461755)
chr2 (24-93)||(32526215-32526284)
chr2 (215-264)||(36324124-36324173)
chr2 (219-264)||(37613892-37613937)
chr2 (219-264)||(38445437-38445482)
chr2 (17-85)||(4618808-4618876)
chr2 (224-264)||(12553958-12553998)
chr2 (224-264)||(14955811-14955851)
chr2 (219-259)||(22422003-22422043)
chr2 (228-264)||(25508861-25508897)
chr2 (225-257)||(27097206-27097238)
chr2 (216-264)||(27665970-27666017)
chr2 (228-264)||(30923250-30923286)
chr2 (219-259)||(31580421-31580461)
chr2 (219-259)||(33585519-33585559)
chr2 (219-259)||(33759968-33760008)
chr2 (219-259)||(36234273-36234313)
chr2 (216-264)||(43696302-43696349)
[»] chr1 (32 HSPs)
chr1 (223-264)||(50377587-50377628)
chr1 (224-264)||(27456753-27456793)
chr1 (224-264)||(47133166-47133206)
chr1 (224-263)||(32678932-32678971)
chr1 (217-264)||(49504376-49504423)
chr1 (213-259)||(20266577-20266623)
chr1 (227-264)||(26535600-26535637)
chr1 (219-264)||(34878061-34878106)
chr1 (224-264)||(5984080-5984120)
chr1 (224-264)||(39888446-39888486)
chr1 (226-261)||(5685686-5685721)
chr1 (219-257)||(8211090-8211128)
chr1 (213-259)||(33816928-33816974)
chr1 (213-259)||(33876398-33876444)
chr1 (217-259)||(48217712-48217754)
chr1 (219-256)||(1742563-1742600)
chr1 (225-262)||(5601025-5601062)
chr1 (227-264)||(12635433-12635470)
chr1 (219-264)||(32395261-32395306)
chr1 (219-264)||(33486678-33486723)
chr1 (219-264)||(39987688-39987733)
chr1 (210-262)||(9172762-9172814)
chr1 (210-262)||(9180744-9180796)
chr1 (228-264)||(11462274-11462310)
chr1 (228-264)||(21687642-21687678)
chr1 (219-259)||(30712075-30712115)
chr1 (219-259)||(30879350-30879390)
chr1 (228-264)||(36894200-36894236)
chr1 (224-264)||(40163218-40163258)
chr1 (224-264)||(41081475-41081515)
chr1 (224-264)||(44915903-44915943)
chr1 (218-262)||(45425832-45425875)
[»] chr7 (24 HSPs)
chr7 (224-264)||(17611657-17611697)
chr7 (218-264)||(11654074-11654120)
chr7 (212-262)||(35664912-35664962)
chr7 (219-264)||(9976993-9977038)
chr7 (219-264)||(28044539-28044584)
chr7 (219-264)||(28407701-28407746)
chr7 (218-259)||(39328576-39328617)
chr7 (219-264)||(48316602-48316647)
chr7 (224-264)||(1769074-1769114)
chr7 (224-260)||(41553224-41553260)
chr7 (216-264)||(48061685-48061733)
chr7 (217-264)||(24610040-24610087)
chr7 (218-256)||(11738646-11738684)
chr7 (225-259)||(24770521-24770555)
chr7 (219-260)||(4999801-4999842)
chr7 (229-262)||(5348391-5348424)
chr7 (219-264)||(11344083-11344128)
chr7 (219-264)||(12141090-12141135)
chr7 (219-260)||(23425139-23425180)
chr7 (219-264)||(24069173-24069218)
chr7 (219-259)||(21266663-21266703)
chr7 (219-259)||(26492636-26492676)
chr7 (35-79)||(37056230-37056274)
chr7 (219-259)||(42066828-42066868)
[»] chr3 (43 HSPs)
chr3 (219-263)||(21313297-21313341)
chr3 (212-264)||(52922893-52922945)
chr3 (218-264)||(20464747-20464793)
chr3 (218-264)||(43017148-43017194)
chr3 (219-264)||(628707-628752)
chr3 (219-264)||(6954479-6954524)
chr3 (219-264)||(9797317-9797362)
chr3 (228-264)||(14859755-14859791)
chr3 (216-264)||(21533589-21533637)
chr3 (228-264)||(23799740-23799776)
chr3 (228-264)||(46304313-46304349)
chr3 (224-264)||(47896411-47896451)
chr3 (213-264)||(105693-105743)
chr3 (224-262)||(17238070-17238108)
chr3 (224-262)||(20608686-20608724)
chr3 (218-264)||(31271614-31271660)
chr3 (23-85)||(50582998-50583060)
chr3 (24-85)||(4252526-4252587)
chr3 (219-264)||(10229736-10229781)
chr3 (219-264)||(24396283-24396327)
chr3 (218-259)||(25850066-25850107)
chr3 (219-264)||(35175663-35175708)
chr3 (219-264)||(36461220-36461265)
chr3 (219-264)||(36910549-36910594)
chr3 (219-264)||(38546059-38546104)
chr3 (219-264)||(40487585-40487630)
chr3 (215-264)||(50981113-50981161)
chr3 (215-264)||(51084247-51084295)
chr3 (219-259)||(2342716-2342756)
chr3 (219-259)||(4178833-4178873)
chr3 (224-264)||(10108496-10108536)
chr3 (224-264)||(10233330-10233370)
chr3 (219-259)||(12050431-12050471)
chr3 (212-264)||(14585896-14585946)
chr3 (219-259)||(25162704-25162744)
chr3 (228-264)||(26715914-26715950)
chr3 (216-264)||(31462402-31462450)
chr3 (219-259)||(38854805-38854845)
chr3 (228-264)||(41818486-41818522)
chr3 (224-264)||(46979771-46979811)
chr3 (224-264)||(47041836-47041876)
chr3 (228-260)||(47733369-47733401)
chr3 (224-264)||(48401526-48401566)
[»] scaffold0039 (1 HSPs)
scaffold0039 (225-264)||(53190-53229)
[»] scaffold0603 (1 HSPs)
scaffold0603 (219-264)||(7988-8033)
[»] scaffold0021 (1 HSPs)
scaffold0021 (224-264)||(4418-4458)
[»] scaffold0445 (1 HSPs)
scaffold0445 (224-259)||(1638-1673)
[»] scaffold0050 (1 HSPs)
scaffold0050 (219-262)||(65825-65868)
[»] scaffold0146 (1 HSPs)
scaffold0146 (224-262)||(16091-16129)
[»] scaffold0136 (1 HSPs)
scaffold0136 (214-264)||(9820-9870)
[»] scaffold0128 (1 HSPs)
scaffold0128 (219-264)||(37092-37137)
[»] scaffold0121 (1 HSPs)
scaffold0121 (219-264)||(31057-31102)
[»] scaffold0113 (1 HSPs)
scaffold0113 (227-264)||(36464-36501)
[»] scaffold0015 (1 HSPs)
scaffold0015 (219-264)||(3817-3862)
[»] scaffold0009 (1 HSPs)
scaffold0009 (228-264)||(57881-57917)


Alignment Details
Target: chr8 (Bit Score: 142; Significance: 1e-74; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 17 - 207
Target Start/End: Complemental strand, 21239427 - 21239239
Alignment:
Q  17 cagggaaaatcgaacttgaaaccttgaaaggaacacactccaagatcgcaaaccaatcactaagccaactctaaatgtgtagtttacatcacatattaat 116  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  21239427 cagggaaaatcaaacttgaaaccttgaaaggaacacactccaagatcgcaagccaaccactaagccaactctaaatgtgtagtttacatcacatattaat 21239328  T
Q  117 ttcttttgcatagtttatagtgatataatagttgctatgtatattccttnnnnnnntatagttgttatatatattatatttgttaaataga 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||        |||||||||||||||||||| |||||||||||||    
T  21239327 ttcttttgcatagtttatagtgatataatagttgctatgtatatttcttaaaaaa--atagttgttatatatattatgtttgttaaataga 21239239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 21238101 - 21238050
Alignment:
Q  213 ttattattttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21238101 ttattattttctttgacaaaaacaaaacaatattcattcattcaaattgata 21238050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 40618850 - 40618899
Alignment:
Q  215 attattttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  40618850 attattttttttgacaaaaacaaaacgatattcattcattcaaattgata 40618899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 3673749 - 3673704
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||    
T  3673749 ttttttttgacaaaaacaaaacgatattcattcattcaaattgata 3673704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 470933 - 470973
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  470933 tttgacaaaaacaaaacaatattcattcatttaaattgata 470973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 3240692 - 3240644
Alignment:
Q  216 ttattttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||| ||||||||||||||||| || ||||||||||||||||||||    
T  3240692 ttattttttttgacaaaaacaaaacgatgttcattcattcaaattgata 3240644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 24099038 - 24099081
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattga 262  Q
    |||| ||||||||||||||||| |||||||||||||||||||||    
T  24099038 ttttttttgacaaaaacaaaacgatattcattcattcaaattga 24099081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 218 - 264
Target Start/End: Original strand, 28086592 - 28086638
Alignment:
Q  218 attttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||| ||||||||||||||||| ||||||||| |||||||||||||    
T  28086592 attttttttgacaaaaacaaaacgatattcatttattcaaattgata 28086638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 10377982 - 10377937
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||||    
T  10377982 ttttttttgacaaaaacaaaacgatattcattcattcaaatcgata 10377937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 15596934 - 15596979
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| |||||| |||||||||| |||||||||||||||||||||||    
T  15596934 ttttttttgacgaaaacaaaacgatattcattcattcaaattgata 15596979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 17693390 - 17693439
Alignment:
Q  215 attattttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||| ||||||||||||||||| ||||||||||| |||||||||||    
T  17693390 attaatttttttgacaaaaacaaaacgatattcattcactcaaattgata 17693439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 27498147 - 27498192
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||    
T  27498147 ttttttttgacaaaaataaaataatattcattcattcaaattgata 27498192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 30568102 - 30568147
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||  |||||||||||||||||||||||    
T  30568102 ttttttttgacaaaaacaaaatgatattcattcattcaaattgata 30568147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 7883022 - 7883062
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  7883022 ttttttttgacaaaaacaaaacgatattcattcattcaaat 7883062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 34102566 - 34102530
Alignment:
Q  228 acaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||||||||||||||||||||||||||| ||||||    
T  34102566 acaaaaacaaaacaatattcattcattcaagttgata 34102530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 259
Target Start/End: Original strand, 27746887 - 27746921
Alignment:
Q  225 ttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||||||||||||||| ||||||||||||||||||    
T  27746887 ttgacaaaaacaaaacgatattcattcattcaaat 27746921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 1236479 - 1236524
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||  |||||||||||||||||| ||||    
T  1236479 ttttttttgacaaaaacaaaatgatattcattcattcaaatcgata 1236524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 9637190 - 9637235
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||| ||||||||||||| ||||||||||||| |||||||||    
T  9637190 tttttttttacaaaaacaaaacgatattcattcatttaaattgata 9637235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 14906689 - 14906729
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||| ||||||||||||||||  ||||||||||||||||||    
T  14906689 ttttttttgacaaaaacaaaatgatattcattcattcaaat 14906729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 19443843 - 19443879
Alignment:
Q  228 acaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  19443843 acaaaaataaaacgatattcattcattcaaattgata 19443879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 23230946 - 23230906
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||||||| |||||| |||||||||||||||||| ||||    
T  23230946 tttgacaaaagcaaaacgatattcattcattcaaatcgata 23230906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 30911384 - 30911448
Alignment:
Q  21 gaaaatcgaacttgaaaccttgaaaggaacacactccaagatcgcaaaccaatcactaagccaac 85  Q
    ||||||| ||| ||||||||||| |||| || ||||||||||| |||| |||||| || ||||||    
T  30911384 gaaaatcaaacatgaaaccttgagaggagcaaactccaagatctcaaatcaatcattaggccaac 30911448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 34610146 - 34610110
Alignment:
Q  228 acaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  34610146 acaaaaacaaaacgatatttattcattcaaattgata 34610110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 40211086 - 40211126
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| |||||||||||| |||||||||||||||||| ||||    
T  40211086 tttgtcaaaaacaaaacgatattcattcattcaaatcgata 40211126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 264
Target Start/End: Original strand, 31851663 - 31851709
Alignment:
Q  218 attttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  31851663 attttttttgacaaaaacaaaataatattcattcattcaaattgata 31851709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 264
Target Start/End: Original strand, 31575337 - 31575384
Alignment:
Q  217 tattttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||||||| |||| |||||||||||||| |||||||||||||||||    
T  31575337 tattttcttttacaagaacaaaacaatatttattcattcaaattgata 31575384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 226 - 264
Target Start/End: Original strand, 33052958 - 33052996
Alignment:
Q  226 tgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  33052958 tgacaaaaacaaaacgatattcattcattcaaattgata 33052996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 7514986 - 7515031
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||||    
T  7514986 ttttttttgacaaaaacaaaacgatattcattcattcaaatcgata 7515031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 31297126 - 31297081
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||| ||||||||||||| |||||||||||||||||||||||    
T  31297126 tttttttttacaaaaacaaaacgatattcattcattcaaattgata 31297081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 32327003 - 32327048
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||||    
T  32327003 ttttttttgacaaaaacaaaacgatattcattcattcaaatcgata 32327048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 29744537 - 29744497
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||||||  ||||||||||||||||||||||||||||||    
T  29744537 tttgacaaaggcaaaacaatattcattcattcaaattgata 29744497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 32060178 - 32060138
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  32060178 tttgacaaaaataaaacgatattcattcattcaaattgata 32060138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 4984326 - 4984373
Alignment:
Q  212 tttattattttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    ||||||||||| ||||||||||| ||||  ||||||||||||||||||    
T  4984326 tttattattttttttgacaaaaataaaatgatattcattcattcaaat 4984373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 264
Target Start/End: Complemental strand, 606516 - 606466
Alignment:
Q  214 tattattttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| |||| ||||||||||||||||  |||||||||||||||||| ||||    
T  606516 tatttttttttttgacaaaaacaaaatgatattcattcattcaaatcgata 606466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 3907608 - 3907554
Alignment:
Q  24 aatcgaacttgaaaccttgaaaggaacacactccaagatcgcaaaccaatcacta 78  Q
    |||||||||||||| ||||| |||| ||||| |||||||| |||||||| |||||    
T  3907608 aatcgaacttgaaatcttgagaggagcacaccccaagatcccaaaccaaccacta 3907554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 3913357 - 3913402
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||| ||||| |||||||||||||||||| ||||    
T  3913357 ttttttttgacaaaaataaaacgatattcattcattcaaatcgata 3913402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 8497280 - 8497239
Alignment:
Q  218 attttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    ||||| ||||||||||||||||  ||||||||||||||||||    
T  8497280 attttttttgacaaaaacaaaatgatattcattcattcaaat 8497239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 9341434 - 9341479
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||| ||| |||||||||||||| ||||    
T  9341434 ttttttttgacaaaaacaaaacgatactcattcattcaaatcgata 9341479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 12170775 - 12170730
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||| ||||||||||||| |||||||||||||||||| ||||    
T  12170775 ttttattttacaaaaacaaaacgatattcattcattcaaatcgata 12170730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 227 - 264
Target Start/End: Original strand, 14174862 - 14174899
Alignment:
Q  227 gacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  14174862 gacaaaaacaaaacgatattcattcattcaaatcgata 14174899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 227 - 264
Target Start/End: Original strand, 14179398 - 14179435
Alignment:
Q  227 gacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  14179398 gacaaaaacaaaacgatattcattcattcaaatcgata 14179435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 260
Target Start/End: Complemental strand, 19164871 - 19164830
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaatt 260  Q
    |||| ||| ||||||||||||| |||||||||||||||||||    
T  19164871 tttttttttacaaaaacaaaacgatattcattcattcaaatt 19164830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 260
Target Start/End: Original strand, 29319660 - 29319701
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaatt 260  Q
    |||| ||||||||||||||||  |||||||||||||||||||    
T  29319660 ttttttttgacaaaaacaaaatgatattcattcattcaaatt 29319701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 34018871 - 34018822
Alignment:
Q  215 attattttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||| | ||||| ||||||||||| ||||||||||||| |||||||||    
T  34018871 attattatttttgataaaaacaaaacgatattcattcatttaaattgata 34018822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 3173978 - 3174018
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||| |||||||||||||||| ||||||| |||||||||||    
T  3173978 ttttttttgacaaaaacaaaataatattcgttcattcaaat 3174018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 17149586 - 17149634
Alignment:
Q  24 aatcgaacttgaaaccttgaaaggaacacactccaagatcgcaaaccaa 72  Q
    |||||||| ||| ||||||| |||| |||||||||||||| ||||||||    
T  17149586 aatcgaacctgagaccttgagaggagcacactccaagatcccaaaccaa 17149634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 259
Target Start/End: Original strand, 17237048 - 17237092
Alignment:
Q  215 attattttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||||||| |||||||| |||||||  ||||||||||||||||||    
T  17237048 attattttttttgacaacaacaaaatgatattcattcattcaaat 17237092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 23947083 - 23947123
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||| ||||||||||||||||  ||||||||||||||||||    
T  23947083 ttttttttgacaaaaacaaaatgatattcattcattcaaat 23947123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 10332331 - 10332376
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||    
T  10332331 ttttttttgacaaaaacaaaacaatatccattcattcaaattgata 10332376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 13007534 - 13007489
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||    
T  13007534 ttttttttgacaaaaacaaaacgatattcattcattcaaattgata 13007489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 8984777 - 8984817
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  8984777 tttgacaaaaacaaaacgatattcattcattcaaattgata 8984817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 6011921 - 6011966
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||||    
T  6011921 ttttttttgacaaaaacaaaacgatattcattcattcaaatcgata 6011966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 8087996 - 8088041
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||  |||||||||||||||||||||||    
T  8087996 ttttttttgacaaaaacaaaatgatattcattcattcaaattgata 8088041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 9113508 - 9113553
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||||    
T  9113508 ttttttttgacaaaaacaaaacgatattcattcattcaaatcgata 9113553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 38007662 - 38007617
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||||    
T  38007662 ttttttttgacaaaaacaaaacgatattcattcattcaaatcgata 38007617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 7886706 - 7886746
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  7886706 ttttttttgacaaaaacaaaacgatattcattcattcaaat 7886746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 21042668 - 21042716
Alignment:
Q  37 accttgaaaggaacacactccaagatcgcaaaccaatcactaagccaac 85  Q
    |||||||||||| || ||||||||||| ||||||||||||||| |||||    
T  21042668 accttgaaaggagcaaactccaagatcccaaaccaatcactaaaccaac 21042716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 27576160 - 27576196
Alignment:
Q  228 acaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||||||||||||||||||||||||||||| ||||    
T  27576160 acaaaaacaaaacaatattcattcattcaaatcgata 27576196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 224 - 263
Target Start/End: Complemental strand, 10723061 - 10723022
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgat 263  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  10723061 tttgacaaaaacaaaacgatatttattcattcaaattgat 10723022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 264
Target Start/End: Complemental strand, 13422231 - 13422192
Alignment:
Q  225 ttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  13422231 ttgacaaaaacaaaatgatattcattcattcaaattgata 13422192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 264
Target Start/End: Original strand, 14726250 - 14726289
Alignment:
Q  225 ttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  14726250 ttgacaaaaacaaaacgatattcattcattcaaatcgata 14726289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 230 - 264
Target Start/End: Complemental strand, 4771150 - 4771116
Alignment:
Q  230 aaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||| |||||||||||||||||||||||    
T  4771150 aaaaacaaaacgatattcattcattcaaattgata 4771116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 264
Target Start/End: Complemental strand, 6217204 - 6217158
Alignment:
Q  218 attttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||| ||| ||||||| ||||| |||||||||||||||||||||||    
T  6217204 attttttttaacaaaaataaaacgatattcattcattcaaattgata 6217158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 21060047 - 21060089
Alignment:
Q  217 tattttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||||| ||||||||||||||||  ||||||||||||||||||    
T  21060047 tattttttttgacaaaaacaaaatgatattcattcattcaaat 21060089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 31391545 - 31391598
Alignment:
Q  213 ttattattttctttgacaaaaacaaaacaatattcattc--attcaaattgata 264  Q
    |||||||| | ||||||||||||||||| ||||||||||  |||||||||||||    
T  31391545 ttattattatttttgacaaaaacaaaacgatattcattcagattcaaattgata 31391598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 36895492 - 36895438
Alignment:
Q  24 aatcgaacttgaaaccttgaaaggaacacactccaagatcgcaaaccaatcacta 78  Q
    |||||||| ||||||||||| |||| |||||||||||||| ||| | ||||||||    
T  36895492 aatcgaacatgaaaccttgagaggagcacactccaagatcccaagctaatcacta 36895438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 26825735 - 26825690
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||| ||||| |||||||||||||||||| ||||    
T  26825735 ttttttttgacaaaaataaaacgatattcattcattcaaatcgata 26825690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 259
Target Start/End: Complemental strand, 30371939 - 30371894
Alignment:
Q  214 tattattttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    ||||| ||| ||||||||||||||||  ||||||||||||||||||    
T  30371939 tattaatttttttgacaaaaacaaaatgatattcattcattcaaat 30371894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 39326715 - 39326670
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||| ||||||||||||| ||||||||||||| |||||||||    
T  39326715 ttttttttaacaaaaacaaaacgatattcattcatttaaattgata 39326670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 177746 - 177790
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgat 263  Q
    |||| ||||||||||| ||||  ||||||||||||||||||||||    
T  177746 ttttttttgacaaaaaaaaaatgatattcattcattcaaattgat 177790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 7930450 - 7930414
Alignment:
Q  228 acaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| |||||||| |||||||||||||||||||||||    
T  7930450 acaagaacaaaacgatattcattcattcaaattgata 7930414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 24229576 - 24229612
Alignment:
Q  228 acaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  24229576 acaaaaacaaaacgatattcattcattcaaatcgata 24229612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 43008081 - 43008121
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||| ||| |||||||||||| |||||||||||||||||||    
T  43008081 tttttttttacaaaaacaaaataatattcattcattcaaat 43008121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 32766840 - 32766795
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||    
T  32766840 ttttttttgacaaaaacaaaacaatattcattcattcaaatcgata 32766795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 9048995 - 9048955
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  9048995 tttgacaaaaacaaaacgatattcattcattcaaattgata 9048955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 44596980 - 44596940
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  44596980 tttgacaaaaacaaaacaatattcattaattcaaattgata 44596940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 3335935 - 3335970
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    ||||||||||||||||||||||||||||||||||||    
T  3335935 tttgacaaaaacaaaacaatattcattcattcaaat 3335970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 4142547 - 4142592
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||||    
T  4142547 ttttttttgacaaaaacaaaacgatattcattcattcaaatcgata 4142592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 6154992 - 6155037
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||  |||||||||||||||||||||||    
T  6154992 ttttttttgacaaaaacaaaatgatattcattcattcaaattgata 6155037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 19853295 - 19853340
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||||    
T  19853295 ttttttttgacaaaaacaaaacgatattcattcattcaaatcgata 19853340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 40065977 - 40066022
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||| |||||||||||||||||||||||||||||||| ||||    
T  40065977 tttttttttacaaaaacaaaacaatattcattcattcaaatcgata 40066022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 53444445 - 53444400
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| |||||||||||||||| ||||||||||||||||||| ||||    
T  53444445 ttttttttgacaaaaacaaaataatattcattcattcaaatagata 53444400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 56156440 - 56156476
Alignment:
Q  228 acaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||| |||||||||||||||||||||||    
T  56156440 acaaaaacaaaacgatattcattcattcaaattgata 56156476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 264
Target Start/End: Original strand, 17949104 - 17949151
Alignment:
Q  217 tattttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||| ||||||| ||||||||| |||||||||||||||||| ||||    
T  17949104 tattttttttgacagaaacaaaacgatattcattcattcaaatcgata 17949151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 264
Target Start/End: Original strand, 17952956 - 17953003
Alignment:
Q  217 tattttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||| ||||||| ||||||||| |||||||||||||||||| ||||    
T  17952956 tattttttttgacagaaacaaaacgatattcattcattcaaatcgata 17953003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 264
Target Start/End: Original strand, 21686031 - 21686070
Alignment:
Q  225 ttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  21686031 ttgacaaaaacaaaacgatattcattcattcaaatcgata 21686070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 36204163 - 36204206
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattga 262  Q
    |||| ||||||||||||||||| |||||| ||||||||||||||    
T  36204163 ttttttttgacaaaaacaaaacgatattctttcattcaaattga 36204206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 264
Target Start/End: Complemental strand, 13634446 - 13634396
Alignment:
Q  214 tattattttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| |||| ||||||||||||||||  |||||||||||||||||| ||||    
T  13634446 tatttttttttttgacaaaaacaaaatgatattcattcattcaaatcgata 13634396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 230 - 264
Target Start/End: Complemental strand, 28857715 - 28857681
Alignment:
Q  230 aaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||| |||||||||||||||||||||||    
T  28857715 aaaaacaaaacgatattcattcattcaaattgata 28857681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 133
Target Start/End: Original strand, 48992474 - 48992504
Alignment:
Q  103 catcacatattaatttcttttgcatagttta 133  Q
    |||||||||||||||||||||||||||||||    
T  48992474 catcacatattaatttcttttgcatagttta 48992504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 2521105 - 2521060
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||| ||||||||||||| |||||||||||||||||| ||||    
T  2521105 tttttttttacaaaaacaaaacgatattcattcattcaaatcgata 2521060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 7093443 - 7093390
Alignment:
Q  24 aatcgaacttgaaaccttgaaaggaacacactccaagatcgcaaaccaatcact 77  Q
    |||||||| | |||||||||||||| |||||||||||||| ||| |||| ||||    
T  7093443 aatcgaacctaaaaccttgaaaggagcacactccaagatcccaagccaaccact 7093390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 10496662 - 10496617
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||  ||||| |||||||||||||||||||||||    
T  10496662 ttttttttgacaaaattaaaacgatattcattcattcaaattgata 10496617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 36162048 - 36162003
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||| ||||  |||||||||||||||||||||||    
T  36162048 ttttttttgacaaaaataaaatgatattcattcattcaaattgata 36162003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 231 - 264
Target Start/End: Complemental strand, 36700537 - 36700504
Alignment:
Q  231 aaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||| ||||||||||||||||||||||||||||    
T  36700537 aaaacgaaacaatattcattcattcaaattgata 36700504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 227 - 264
Target Start/End: Complemental strand, 51535543 - 51535507
Alignment:
Q  227 gacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||||||||||||||||| |||||||||||||||||    
T  51535543 gacaaaaacaaaacaatatt-attcattcaaattgata 51535507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 53811344 - 53811299
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||| ||||||||||||| |||| ||||    
T  53811344 ttttttttgacaaaaacaaaacgatattcattcatttaaatcgata 53811299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 2115354 - 2115394
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||| ||||||||||||||||  ||||||||||||||||||    
T  2115354 ttttttttgacaaaaacaaaatgatattcattcattcaaat 2115394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 260
Target Start/End: Complemental strand, 9180779 - 9180735
Alignment:
Q  216 ttattttctttgacaaaaacaaaacaatattcattcattcaaatt 260  Q
    ||||||| ||| ||||||| ||||| |||||||||||||||||||    
T  9180779 ttattttattttacaaaaataaaacgatattcattcattcaaatt 9180735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 9284234 - 9284194
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||| ||||||||||||||||  ||||||||||||||||||    
T  9284234 ttttttttgacaaaaacaaaatgatattcattcattcaaat 9284194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 9528643 - 9528683
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||| ||||||||||||||||  ||||||||||||||||||    
T  9528643 ttttttttgacaaaaacaaaatgatattcattcattcaaat 9528683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 19220601 - 19220561
Alignment:
Q  23 aaatcgaacttgaaaccttgaaaggaacacactccaagatc 63  Q
    ||||||||| ||||||||||| |||| ||||||||||||||    
T  19220601 aaatcgaacctgaaaccttgagaggagcacactccaagatc 19220561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 25274206 - 25274166
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||| ||||||||||||||||  ||||||||||||||||||    
T  25274206 ttttttttgacaaaaacaaaatgatattcattcattcaaat 25274166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 26633463 - 26633499
Alignment:
Q  228 acaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  26633463 acaaaaacaaaacgatattcattcattcaaatcgata 26633499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 38706476 - 38706516
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||| ||||||||||||||||  ||||||||||||||||||    
T  38706476 ttttttttgacaaaaacaaaatcatattcattcattcaaat 38706516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 47320201 - 47320241
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||||||  |||||||||||||||||| ||||    
T  47320201 tttgacaaaaacaaaattatattcattcattcaaatcgata 47320241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 52097690 - 52097722
Alignment:
Q  227 gacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||||||||||||| ||||||||||||||||||    
T  52097690 gacaaaaacaaaacgatattcattcattcaaat 52097722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 56040438 - 56040474
Alignment:
Q  228 acaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  56040438 acaaaaacaaaacgatattcattcattcaaatcgata 56040474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 8024799 - 8024848
Alignment:
Q  23 aaatcgaacttgaaaccttgaaaggaacacactccaagatcgcaaaccaa 72  Q
    ||||||||||||||||||||| || |||||||||||| ||||||||||||    
T  8024799 aaatcgaacttgaaaccttgagagaaacacactccaacatcgcaaaccaa 8024848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 37876390 - 37876435
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||    
T  37876390 ttttttttgacaaaaacaaaacgatattcattcattcaaattgata 37876435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 37994599 - 37994554
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||    
T  37994599 ttttttttgacaaaaacaaaacgatattcattcattcaaattgata 37994554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 41328050 - 41328010
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  41328050 tttgacaaaaacaaaacgatattcattcattcaaattgata 41328010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 18763787 - 18763744
Alignment:
Q  216 ttattttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||    
T  18763787 ttattttttttgacaaaaacaaaacgatattcattcattcaaat 18763744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 215 - 262
Target Start/End: Original strand, 26025258 - 26025305
Alignment:
Q  215 attattttctttgacaaaaacaaaacaatattcattcattcaaattga 262  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||    
T  26025258 attattttttttgacaaaaacaaaatgatattcattcattcaaattga 26025305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 4779069 - 4779024
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||||    
T  4779069 ttttttttgacaaaaacaaaactatattcattcattcaaatcgata 4779024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 5427653 - 5427698
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||||    
T  5427653 ttttttttgacaaaaacaaaacgatattcattcattcaaatcgata 5427698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 24588050 - 24588005
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||||| ||||||| |||||||||||||    
T  24588050 ttttttttgacaaaaacaaaacaacattcatttattcaaattgata 24588005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 29279349 - 29279394
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| |||||||||||| |||| |||||||||||||||||||||||    
T  29279349 ttttttttgacaaaaactaaacgatattcattcattcaaattgata 29279394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 32448401 - 32448446
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||  |||||||||||||||||||||||    
T  32448401 ttttttttgacaaaaacaaaatgatattcattcattcaaattgata 32448446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 33924021 - 33923976
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||||    
T  33924021 ttttttttgacaaaaacaaaacgatattcattcattcaaatcgata 33923976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 31193117 - 31193165
Alignment:
Q  216 ttattttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||| ||| ||||||||||||| |||||||||||||||||| ||||    
T  31193117 ttatttttttttacaaaaacaaaacgatattcattcattcaaatcgata 31193165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 264
Target Start/End: Complemental strand, 7646788 - 7646749
Alignment:
Q  225 ttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  7646788 ttgacaaaaacaaaacgatattcattcattcaaatcgata 7646749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 9374334 - 9374369
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    ||||||||||||||||| ||||||||||||||||||    
T  9374334 tttgacaaaaacaaaacgatattcattcattcaaat 9374369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 11189404 - 11189454
Alignment:
Q  213 ttattattttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||||||| ||||||||||||||||||||||||||| |||  ||||||||    
T  11189404 ttattatttt-tttgacaaaaacaaaacaatattcatttattttaattgata 11189454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 216 - 259
Target Start/End: Original strand, 27248914 - 27248957
Alignment:
Q  216 ttattttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    ||||||| ||||||||||||||||  ||||||||||||||||||    
T  27248914 ttattttttttgacaaaaacaaaatgatattcattcattcaaat 27248957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 263
Target Start/End: Complemental strand, 37417023 - 37416992
Alignment:
Q  232 aaacaaaacaatattcattcattcaaattgat 263  Q
    ||||||||||||||||||||||||||||||||    
T  37417023 aaacaaaacaatattcattcattcaaattgat 37416992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 4193154 - 4193112
Alignment:
Q  217 tattttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||||| ||||||||||||||||  ||||||||||||||||||    
T  4193154 tattttttttgacaaaaacaaaatgatattcattcattcaaat 4193112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 264
Target Start/End: Complemental strand, 31788765 - 31788727
Alignment:
Q  226 tgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  31788765 tgacaaaaacaaaacgatattcattcattcaaatcgata 31788727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 34128457 - 34128499
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattg 261  Q
    |||| ||| ||||||||||||||||||| ||||||||||||||    
T  34128457 tttttttttacaaaaacaaaacaatatttattcattcaaattg 34128499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 259
Target Start/End: Original strand, 36942912 - 36942946
Alignment:
Q  225 ttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||||||||||||||| ||||||||||||||||||    
T  36942912 ttgacaaaaacaaaacgatattcattcattcaaat 36942946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 256
Target Start/End: Original strand, 42017674 - 42017712
Alignment:
Q  218 attttctttgacaaaaacaaaacaatattcattcattca 256  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  42017674 attttttttgacaaaaacaaaacgatattcattcattca 42017712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 1415873 - 1415828
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||  |||||||||||||||||| ||||    
T  1415873 ttttttttgacaaaaacaaaatgatattcattcattcaaatcgata 1415828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 4100646 - 4100601
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||| ||||||||||| |||||||||||||||||| ||||    
T  4100646 ttttttttgaaaaaaacaaaacgatattcattcattcaaatcgata 4100601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 4903929 - 4903974
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||| ||||||||||||| ||||||||||||| |||||||||    
T  4903929 tttttttttacaaaaacaaaacgatattcattcatttaaattgata 4903974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 8192481 - 8192542
Alignment:
Q  24 aatcgaacttgaaaccttgaaaggaacacactccaagatcgcaaaccaatcactaagccaac 85  Q
    |||||||| ||| ||||||| |||| |||||||||||||| ||| |||| ||||| ||||||    
T  8192481 aatcgaacctgagaccttgagaggagcacactccaagatcccaagccaaccactaggccaac 8192542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 10929980 - 10929935
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||  |||||||||| ||||||||||||    
T  10929980 ttttttttgacaaaaacaaaaagatattcattcgttcaaattgata 10929935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 19062132 - 19062177
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||| ||||||| ||||||||||||||||||| |||||||||    
T  19062132 tttttttttacaaaaataaaacaatattcattcatttaaattgata 19062177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 24461755 - 24461710
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||| ||||||| ||||| |||||||||||||||||||||||    
T  24461755 tttttttttacaaaaataaaacgatattcattcattcaaattgata 24461710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 32526215 - 32526284
Alignment:
Q  24 aatcgaacttgaaaccttgaaaggaacacactccaagatcgcaaaccaatcactaagccaactctaaatg 93  Q
    |||||||| ||| ||||||| |||| || ||| ||||||| |||| ||| |||||||||||||| |||||    
T  32526215 aatcgaacctgagaccttgagaggagcaaacttcaagatcccaaatcaaccactaagccaactccaaatg 32526284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 36324173 - 36324124
Alignment:
Q  215 attattttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||| | ||||||||||||||||| |||| |||| |||||||||||||    
T  36324173 attattatttttgacaaaaacaaaacgatatacatttattcaaattgata 36324124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 37613892 - 37613937
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||| |||||||| ||||||||| ||||    
T  37613892 ttttttttgacaaaaacaaaaccatattcatccattcaaatcgata 37613937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 38445482 - 38445437
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||| ||||||||||||| |||||||||||||||||| ||||    
T  38445482 tttttttttacaaaaacaaaacgatattcattcattcaaatcgata 38445437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 4618808 - 4618876
Alignment:
Q  17 cagggaaaatcgaacttgaaaccttgaaaggaacacactccaagatcgcaaaccaatcactaagccaac 85  Q
    ||||| ||||||||| ||||||||||| |||| || ||||||||||  ||| |||| ||||| ||||||    
T  4618808 caggggaaatcgaacctgaaaccttgagaggagcatactccaagattccaagccaaccactaggccaac 4618876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 12553958 - 12553998
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||| ||||  |||||||||||||||||||||||    
T  12553958 tttgacaaaaataaaatgatattcattcattcaaattgata 12553998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 14955851 - 14955811
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||||||  ||||||||||||| |||||||||    
T  14955851 tttgacaaaaacaaaatgatattcattcatttaaattgata 14955811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 22422043 - 22422003
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||| ||||||||||||||||  ||||||||||||||||||    
T  22422043 ttttttttgacaaaaacaaaatgatattcattcattcaaat 22422003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 25508861 - 25508897
Alignment:
Q  228 acaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  25508861 acaaaaacaaaacgatatttattcattcaaattgata 25508897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 257
Target Start/End: Original strand, 27097206 - 27097238
Alignment:
Q  225 ttgacaaaaacaaaacaatattcattcattcaa 257  Q
    |||||||||||||||| ||||||||||||||||    
T  27097206 ttgacaaaaacaaaacgatattcattcattcaa 27097238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 27666017 - 27665970
Alignment:
Q  216 ttattttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||| ||||||||||| ||| |||||||||||||||| ||||||||    
T  27666017 ttattttttttgacaaaaataaa-caatattcattcattctaattgata 27665970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 30923250 - 30923286
Alignment:
Q  228 acaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||  |||||||||||||||||||||||    
T  30923250 acaaaaacaaaatgatattcattcattcaaattgata 30923286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 31580421 - 31580461
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||| ||||||||||||||||  ||||||||||||||||||    
T  31580421 ttttttttgacaaaaacaaaatgatattcattcattcaaat 31580461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 33585519 - 33585559
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||| ||||||||||||||||| |||||| |||||||||||    
T  33585519 ttttttttgacaaaaacaaaacgatattctttcattcaaat 33585559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 33759968 - 33760008
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||| ||| |||||||||||| |||||||||||||||||||    
T  33759968 tttttttttacaaaaacaaaataatattcattcattcaaat 33760008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 36234313 - 36234273
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||| ||||||||||||||||  ||||||||||||||||||    
T  36234313 ttttttttgacaaaaacaaaatgatattcattcattcaaat 36234273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 43696349 - 43696302
Alignment:
Q  216 ttattttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||| ||||||||||| ||| | |||||||||||||||||||||||    
T  43696349 ttattttttttgacaaaaataaa-cgatattcattcattcaaattgata 43696302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 50377628 - 50377587
Alignment:
Q  223 ctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  50377628 ctttgacaaaaacaaaacgatattcattcattcaaattgata 50377587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 27456793 - 27456753
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  27456793 tttgacaaaaacaaaacgatattcattcattcaaattgata 27456753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 47133206 - 47133166
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  47133206 tttgacaaaaacaaaacgatattcattcattcaaattgata 47133166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 224 - 263
Target Start/End: Original strand, 32678932 - 32678971
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgat 263  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  32678932 tttgacaaaaacaaaacgatattcattcattcaaattgat 32678971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 264
Target Start/End: Original strand, 49504376 - 49504423
Alignment:
Q  217 tattttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  49504376 tattttttttgacaaaaacaaaacgatattcattcattcaaatcgata 49504423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 20266623 - 20266577
Alignment:
Q  213 ttattattttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||||    
T  20266623 ttattattttttttgacaaaaacaaaatgatattcattcattcaaat 20266577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 264
Target Start/End: Complemental strand, 26535637 - 26535600
Alignment:
Q  227 gacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||||||||||| |||||||||||||||||||||||    
T  26535637 gacaaaaacaaaacgatattcattcattcaaattgata 26535600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 34878061 - 34878106
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||||    
T  34878061 ttttttttgacaaaaacaaaacgatattcattcattcaaatcgata 34878106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 5984120 - 5984080
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||||||| |||||||||||||||||| ||||    
T  5984120 tttgacaaaaacaaaacgatattcattcattcaaatcgata 5984080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 39888486 - 39888446
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||||||| |||||||||||| ||||||||||    
T  39888486 tttgacaaaaacaaaacgatattcattcatacaaattgata 39888446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 226 - 261
Target Start/End: Original strand, 5685686 - 5685721
Alignment:
Q  226 tgacaaaaacaaaacaatattcattcattcaaattg 261  Q
    ||||||||||||||| ||||||||||||||||||||    
T  5685686 tgacaaaaacaaaacgatattcattcattcaaattg 5685721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 257
Target Start/End: Original strand, 8211090 - 8211128
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaa 257  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  8211090 ttttttttgacaaaaacaaaacaatattcattcaatcaa 8211128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 33816928 - 33816974
Alignment:
Q  213 ttattattttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||||||||| ||||||||||||||||  || |||||||||||||||    
T  33816928 ttattattttttttgacaaaaacaaaatgatcttcattcattcaaat 33816974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 33876398 - 33876444
Alignment:
Q  213 ttattattttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||||||||| ||||||||||||||||  || |||||||||||||||    
T  33876398 ttattattttttttgacaaaaacaaaatgatcttcattcattcaaat 33876444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 48217754 - 48217712
Alignment:
Q  217 tattttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||||| ||||||||||||||||  ||||||||||||||||||    
T  48217754 tattttttttgacaaaaacaaaatgatattcattcattcaaat 48217712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 1742600 - 1742563
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattca 256  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  1742600 ttttttttgacaaaaacaaaacaatatttattcattca 1742563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 225 - 262
Target Start/End: Complemental strand, 5601062 - 5601025
Alignment:
Q  225 ttgacaaaaacaaaacaatattcattcattcaaattga 262  Q
    ||||||||||||||||||||||||||| || |||||||    
T  5601062 ttgacaaaaacaaaacaatattcattcgtttaaattga 5601025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 227 - 264
Target Start/End: Complemental strand, 12635470 - 12635433
Alignment:
Q  227 gacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  12635470 gacaaaaacaaaacgatattcattcatttaaattgata 12635433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 32395306 - 32395261
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||| |||||||| ||||||||| ||||    
T  32395306 ttttttttgacaaaaacaaaacgatattcatccattcaaatcgata 32395261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 33486678 - 33486723
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||| ||||||| ||||| |||||||||||||||||||||||    
T  33486678 tttttttttacaaaaaaaaaacgatattcattcattcaaattgata 33486723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 39987733 - 39987688
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||| |||||| |||||| |||||||||||||||||||||||    
T  39987733 tttttttttacaaaaccaaaacgatattcattcattcaaattgata 39987688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 9172814 - 9172762
Alignment:
Q  210 tctttattattttctttgacaaaaacaaaacaatattcattcattcaaattga 262  Q
    ||||| || |||| ||||||||||| ||||  |||||||||||||||||||||    
T  9172814 tctttttttttttttttgacaaaaataaaaagatattcattcattcaaattga 9172762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 9180796 - 9180744
Alignment:
Q  210 tctttattattttctttgacaaaaacaaaacaatattcattcattcaaattga 262  Q
    ||||| || |||| ||||||||||| ||||  |||||||||||||||||||||    
T  9180796 tctttttttttttttttgacaaaaataaaaagatattcattcattcaaattga 9180744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 11462274 - 11462310
Alignment:
Q  228 acaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  11462274 acaaaaacaaaacgatattcattcattcaaatcgata 11462310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 21687678 - 21687642
Alignment:
Q  228 acaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  21687678 acaaaaacaaaacgatattcattcattcaaatcgata 21687642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 30712075 - 30712115
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||| ||||||||||||||||  ||||||||||||||||||    
T  30712075 ttttttttgacaaaaacaaaatgatattcattcattcaaat 30712115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 30879390 - 30879350
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||| ||||||||||||||||  ||||||||||||||||||    
T  30879390 ttttttttgacaaaaacaaaatgatattcattcattcaaat 30879350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 36894200 - 36894236
Alignment:
Q  228 acaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  36894200 acaaaaacaaaacgatattcattcattcaaatcgata 36894236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 40163218 - 40163258
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||| |||| |||||| |||||||||||||||||||||||    
T  40163218 tttgataaaagcaaaacgatattcattcattcaaattgata 40163258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 41081475 - 41081515
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||||||  |||||||||||||||||| ||||    
T  41081475 tttgacaaaaacaaaatgatattcattcattcaaatcgata 41081515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 44915943 - 44915903
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||| ||||  |||||||||||||||||||||||    
T  44915943 tttgacaaaaataaaatgatattcattcattcaaattgata 44915903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 45425832 - 45425875
Alignment:
Q  218 attttctttgacaaaaacaaaacaatattcattcattcaaattga 262  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||    
T  45425832 attttttttgacaaaaacaaaata-tattcattcattcaaattga 45425875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000006; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 17611697 - 17611657
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  17611697 tttgacaaaaacaaaacgatattcattcattcaaattgata 17611657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 218 - 264
Target Start/End: Complemental strand, 11654120 - 11654074
Alignment:
Q  218 attttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||| ||| |||||| ||||||||||||||||||||||||||||||    
T  11654120 atttttttttacaaaagcaaaacaatattcattcattcaaattgata 11654074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 35664912 - 35664962
Alignment:
Q  212 tttattattttctttgacaaaaacaaaacaatattcattcattcaaattga 262  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||| |||||||    
T  35664912 tttataattttttttgacaaaaacaaaacaatatttattcatttaaattga 35664962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 9976993 - 9977038
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||| ||||||||||||| |||||||||    
T  9976993 ttttttttgacaaaaacaaaacgatattcattcatttaaattgata 9977038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 28044539 - 28044584
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||||    
T  28044539 ttttttttgacaaaaacaaaacgatattcattcattcaaatcgata 28044584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 28407701 - 28407746
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||| ||||||||||| |||||||||||||||||||||||    
T  28407701 ttttttttgataaaaacaaaacgatattcattcattcaaattgata 28407746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 39328576 - 39328617
Alignment:
Q  218 attttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    ||||| ||||||||||||||||| ||||||||||||||||||    
T  39328576 attttttttgacaaaaacaaaacgatattcattcattcaaat 39328617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 48316602 - 48316647
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||||    
T  48316602 ttttttttgacaaaaacaaaacgatattcattcattcaaatcgata 48316647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 1769074 - 1769114
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  1769074 tttgacaaaaacaaaacgacattcattcattcaaattgata 1769114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 41553224 - 41553260
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaatt 260  Q
    ||||||||||||||||| |||||||||||||||||||    
T  41553224 tttgacaaaaacaaaacgatattcattcattcaaatt 41553260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 48061733 - 48061685
Alignment:
Q  216 ttattttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||| ||| ||||||||||||| |||||||||||||||||| ||||    
T  48061733 ttatttttttttacaaaaacaaaacgatattcattcattcaaatcgata 48061685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 264
Target Start/End: Original strand, 24610040 - 24610087
Alignment:
Q  217 tattttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||| ||||||||||| ||||  |||||||||||||||||||||||    
T  24610040 tattttttttgacaaaaataaaatgatattcattcattcaaattgata 24610087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 256
Target Start/End: Complemental strand, 11738684 - 11738646
Alignment:
Q  218 attttctttgacaaaaacaaaacaatattcattcattca 256  Q
    ||||| |||||||||||| ||||||||||||||||||||    
T  11738684 attttttttgacaaaaactaaacaatattcattcattca 11738646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 259
Target Start/End: Complemental strand, 24770555 - 24770521
Alignment:
Q  225 ttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||||||||||||||| ||||||||||||||||||    
T  24770555 ttgacaaaaacaaaacgatattcattcattcaaat 24770521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 260
Target Start/End: Original strand, 4999801 - 4999842
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaatt 260  Q
    |||| ||| ||||||||||||| |||||||||||||||||||    
T  4999801 tttttttttacaaaaacaaaacgatattcattcattcaaatt 4999842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 262
Target Start/End: Original strand, 5348391 - 5348424
Alignment:
Q  229 caaaaacaaaacaatattcattcattcaaattga 262  Q
    |||||||||||||||| |||||||||||||||||    
T  5348391 caaaaacaaaacaatactcattcattcaaattga 5348424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 11344128 - 11344083
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||| ||||||||||||| ||||||||| |||||||||||||    
T  11344128 tttttttttacaaaaacaaaacgatattcatttattcaaattgata 11344083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 12141090 - 12141135
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||| ||||||||||||| |||||||||||||||||| ||||    
T  12141090 tttttttttacaaaaacaaaacgatattcattcattcaaatcgata 12141135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 260
Target Start/End: Original strand, 23425139 - 23425180
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaatt 260  Q
    |||| ||||||||||||||||  |||||||||||||||||||    
T  23425139 ttttttttgacaaaaacaaaatgatattcattcattcaaatt 23425180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 24069173 - 24069218
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||||| ||||||||||||| ||||||||| |||||||| ||||    
T  24069173 ttttcttttacaaaaacaaaacgatattcattgattcaaatcgata 24069218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 21266703 - 21266663
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||| ||||||||||||||||  ||||||||||||||||||    
T  21266703 ttttttttgacaaaaacaaaatgatattcattcattcaaat 21266663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 26492676 - 26492636
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||| ||||||||||||||||  ||||||||||||||||||    
T  26492676 ttttttttgacaaaaacaaaatgatattcattcattcaaat 26492636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 37056274 - 37056230
Alignment:
Q  35 aaaccttgaaaggaacacactccaagatcgcaaaccaatcactaa 79  Q
    ||||||||| |||| |||||||||||||| |||||||| ||||||    
T  37056274 aaaccttgagaggagcacactccaagatcacaaaccaaccactaa 37056230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 42066828 - 42066868
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||| ||||||||||||||||  ||||||||||||||||||    
T  42066828 ttttttttgacaaaaacaaaatgatattcattcattcaaat 42066868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000006; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 21313341 - 21313297
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgat 263  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||    
T  21313341 ttttttttgacaaaaacaaaacgatattcattcattcaaattgat 21313297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 52922893 - 52922945
Alignment:
Q  212 tttattattttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||| |||| ||||||||||||||||| |||||||||||||||||| ||||    
T  52922893 tttatttttttttttgacaaaaacaaaacgatattcattcattcaaatcgata 52922945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 218 - 264
Target Start/End: Original strand, 20464747 - 20464793
Alignment:
Q  218 attttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||| ||||||||||||||||  |||||||||||||||||||||||    
T  20464747 attttttttgacaaaaacaaaatgatattcattcattcaaattgata 20464793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 218 - 264
Target Start/End: Complemental strand, 43017194 - 43017148
Alignment:
Q  218 attttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  43017194 attttttttgacaaaaacaaaacgatattcattcattcaaatcgata 43017148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 628707 - 628752
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||  |||||||||||||||||||||||    
T  628707 ttttttttgacaaaaacaaaatgatattcattcattcaaattgata 628752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 6954479 - 6954524
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||||    
T  6954479 ttttttttgacaaaaacaaaacgatattcattcattcaaatcgata 6954524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 9797317 - 9797362
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||||    
T  9797317 ttttttttgacaaaaacaaaacgatattcattcattcaaatcgata 9797362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 14859791 - 14859755
Alignment:
Q  228 acaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||| |||||||||||||||||||||||||||    
T  14859791 acaaaaacagaacaatattcattcattcaaattgata 14859755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 21533589 - 21533637
Alignment:
Q  216 ttattttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||| ||||||||||||||||  |||||||||||||||||| ||||    
T  21533589 ttattttttttgacaaaaacaaaatgatattcattcattcaaatcgata 21533637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 23799740 - 23799776
Alignment:
Q  228 acaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||| |||||||||||||||||||||||    
T  23799740 acaaaaacaaaacgatattcattcattcaaattgata 23799776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 46304313 - 46304349
Alignment:
Q  228 acaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||| |||||||||||||||||||||||    
T  46304313 acaaaaacaaaacgatattcattcattcaaattgata 46304349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 47896451 - 47896411
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  47896451 tttgacaaaaacaaaacgatattcattgattcaaattgata 47896411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 105693 - 105743
Alignment:
Q  213 ttattattttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||||| | ||||||||||| ||| |||||||||||||||||||||||||    
T  105693 ttattattatttttgacaaaaataaa-caatattcattcattcaaattgata 105743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 262
Target Start/End: Complemental strand, 17238108 - 17238070
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattga 262  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  17238108 tttgacaaaaacaaaatgatattcattcattcaaattga 17238070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 262
Target Start/End: Original strand, 20608686 - 20608724
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattga 262  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  20608686 tttgacaaaaacaaaacgatattcattcaatcaaattga 20608724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 264
Target Start/End: Original strand, 31271614 - 31271660
Alignment:
Q  218 attttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||| ||||| ||||| ||||||||||||||||||| |||||||||    
T  31271614 attttttttgataaaaataaaacaatattcattcatttaaattgata 31271660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 50583060 - 50582998
Alignment:
Q  23 aaatcgaacttgaaaccttgaaaggaacacactccaagatcgcaaaccaatcactaagccaac 85  Q
    ||||||||| ||||||||| | |||| || ||||||||||| |||||||| ||||| ||||||    
T  50583060 aaatcgaacctgaaaccttaagaggagcaaactccaagatcccaaaccaaccactaggccaac 50582998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 4252526 - 4252587
Alignment:
Q  24 aatcgaacttgaaaccttgaaaggaacacactccaagatcgcaaaccaatcactaagccaac 85  Q
    |||| ||||||| ||||||| |||| |||||||||||||| ||| |||| ||||| ||||||    
T  4252526 aatcaaacttgagaccttgagaggagcacactccaagatctcaagccaaccactaggccaac 4252587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 10229781 - 10229736
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||| ||||| |||||||||||||||||| ||||    
T  10229781 ttttttttgacaaaaataaaacgatattcattcattcaaatcgata 10229736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 24396283 - 24396327
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||||| ||||||||||||| ||||||||| |||||||||||||    
T  24396283 ttttcttt-acaaaaacaaaacgatattcattaattcaaattgata 24396327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 25850107 - 25850066
Alignment:
Q  218 attttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    ||||| ||| ||||||||||||| ||||||||||||||||||    
T  25850107 attttttttcacaaaaacaaaacgatattcattcattcaaat 25850066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 35175708 - 35175663
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||| ||||||| ||||| |||||||||||||||||||||||    
T  35175708 tttttttttacaaaaataaaacgatattcattcattcaaattgata 35175663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 36461220 - 36461265
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||| |||||| |||||||||||| |||||||||||||||||    
T  36461220 tttttttttacaaaatcaaaacaatattaattcattcaaattgata 36461265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 36910549 - 36910594
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||| ||||| |||||||||||||||||| ||||    
T  36910549 ttttttttgacaaaaataaaacgatattcattcattcaaatcgata 36910594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 38546104 - 38546059
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||||||||| ||||| |||||||||||| ||||    
T  38546104 ttttttttgacaaaaacaaaacgatatttattcattcaaatcgata 38546059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 40487630 - 40487585
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||| ||||||||||||| |||||||||||||||||| ||||    
T  40487630 tttttttttacaaaaacaaaacgatattcattcattcaaatcgata 40487585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 50981113 - 50981161
Alignment:
Q  215 attattttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||||| |||||||||||  |||| |||||||||||||||||||||||    
T  50981113 attatttt-tttgacaaaaaataaacgatattcattcattcaaattgata 50981161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 51084247 - 51084295
Alignment:
Q  215 attattttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||||| |||||||||||  |||| |||||||||||||||||||||||    
T  51084247 attatttt-tttgacaaaaaataaacgatattcattcattcaaattgata 51084295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 2342756 - 2342716
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||| ||||||||||||||||  ||||||||||||||||||    
T  2342756 ttttttttgacaaaaacaaaatgatattcattcattcaaat 2342716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 4178873 - 4178833
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||| ||||||||||||||||  ||||||||||||||||||    
T  4178873 ttttttttgacaaaaacaaaatgatattcattcattcaaat 4178833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 10108536 - 10108496
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||| ||||| |||||||||||||||||| ||||    
T  10108536 tttgacaaaaataaaacgatattcattcattcaaatcgata 10108496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 10233370 - 10233330
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||| ||||| |||||||||||||||||| ||||    
T  10233370 tttgacaaaaataaaacgatattcattcattcaaatcgata 10233330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 12050431 - 12050471
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||| ||||||||||||||||| ||||||||||||| ||||    
T  12050431 ttttttttgacaaaaacaaaacgatattcattcatttaaat 12050471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 14585946 - 14585896
Alignment:
Q  212 tttattattttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||| ||||||||||| ||| | |||||||||||||||||||||||    
T  14585946 tttattatttt-tttgacaaaaataaa-cgatattcattcattcaaattgata 14585896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 25162744 - 25162704
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||| ||||||||||||||||  ||||||||||||||||||    
T  25162744 ttttttttgacaaaaacaaaatgatattcattcattcaaat 25162704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 26715914 - 26715950
Alignment:
Q  228 acaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||||||||||  |||||||||||||||    
T  26715914 acaaaaacaaaacaatattcggtcattcaaattgata 26715950  T

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Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 31462402 - 31462450
Alignment:
Q  216 ttattttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||| ||| |||||||  |||| |||||||||||||||||||||||    
T  31462402 ttattttattttacaaaaagtaaacgatattcattcattcaaattgata 31462450  T

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Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 38854805 - 38854845
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    |||| ||||||||||||||||  ||||||||||||||||||    
T  38854805 ttttttttgacaaaaacaaaatgatattcattcattcaaat 38854845  T

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Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 41818522 - 41818486
Alignment:
Q  228 acaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||| |||||| |||||||||||||||||||||||    
T  41818522 acaaaagcaaaacgatattcattcattcaaattgata 41818486  T

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Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 46979771 - 46979811
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||||||| || |||||||||| |||||||||    
T  46979771 tttgacaaaaacaaaactattttcattcattaaaattgata 46979811  T

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Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 47041836 - 47041876
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||||||  |||||||||||||||||| ||||    
T  47041836 tttgacaaaaacaaaatgatattcattcattcaaatagata 47041876  T

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Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 260
Target Start/End: Complemental strand, 47733401 - 47733369
Alignment:
Q  228 acaaaaacaaaacaatattcattcattcaaatt 260  Q
    ||||||||||||| |||||||||||||||||||    
T  47733401 acaaaaacaaaacgatattcattcattcaaatt 47733369  T

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Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 48401566 - 48401526
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||||||||  |||| |||||||||||||||||||||||    
T  48401566 tttgacaaaaaataaacgatattcattcattcaaattgata 48401526  T

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Target: scaffold0039 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 264
Target Start/End: Original strand, 53190 - 53229
Alignment:
Q  225 ttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  53190 ttgacaaaaacaaaacgatattcattcattcaaattgata 53229  T

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Target: scaffold0603 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 8033 - 7988
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||||||||||| ||||| |||||||||||||||||||||||    
T  8033 ttttttttgacaaaaaaaaaacgatattcattcattcaaattgata 7988  T

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Target: scaffold0021 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 4458 - 4418
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||||||| ||||| ||||||||||||||||||||||||    
T  4458 tttgacaaaagcaaaataatattcattcattcaaattgata 4418  T

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Target: scaffold0445 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 224 - 259
Target Start/End: Complemental strand, 1673 - 1638
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaat 259  Q
    ||||||||||||||||| ||||||||||||||||||    
T  1673 tttgacaaaaacaaaacgatattcattcattcaaat 1638  T

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Target: scaffold0050 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 65825 - 65868
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattga 262  Q
    |||| ||| ||||||||||||||||||||||||||| |||||||    
T  65825 tttttttttacaaaaacaaaacaatattcattcattgaaattga 65868  T

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Target: scaffold0146 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 262
Target Start/End: Original strand, 16091 - 16129
Alignment:
Q  224 tttgacaaaaacaaaacaatattcattcattcaaattga 262  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  16091 tttgacaaaaacaaaatgatattcattcattcaaattga 16129  T

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Target: scaffold0136 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 9820 - 9870
Alignment:
Q  214 tattattttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| |||| ||| ||||| |||||||||||||||||||||||||| ||||    
T  9820 tattttttttttttacaaagacaaaacaatattcattcattcaaatcgata 9870  T

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Target: scaffold0128 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 37137 - 37092
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| |||||||||||||||| |||||||||| | |||||||||||    
T  37137 ttttttttgacaaaaacaaaataatattcattaaatcaaattgata 37092  T

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Target: scaffold0121 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 31057 - 31102
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| ||| ||||||| ||||| |||||||||||||||||||||||    
T  31057 tttttttttacaaaaataaaacgatattcattcattcaaattgata 31102  T

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Target: scaffold0113 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 227 - 264
Target Start/End: Original strand, 36464 - 36501
Alignment:
Q  227 gacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  36464 gacaaaaacaaaacgatattctttcattcaaattgata 36501  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 3817 - 3862
Alignment:
Q  219 ttttctttgacaaaaacaaaacaatattcattcattcaaattgata 264  Q
    |||| |||||||||| ||| || |||||||||||||||||||||||    
T  3817 ttttttttgacaaaagcaatacgatattcattcattcaaattgata 3862  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 57881 - 57917
Alignment:
Q  228 acaaaaacaaaacaatattcattcattcaaattgata 264  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  57881 acaaaaacaaaacgatattcattcatttaaattgata 57917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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