View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10193_low_13 (Length: 239)

Name: NF10193_low_13
Description: NF10193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10193_low_13
NF10193_low_13
[»] chr1 (48 HSPs)
chr1 (1-172)||(15435022-15435194)
chr1 (16-172)||(31983965-31984123)
chr1 (3-164)||(7337820-7337983)
chr1 (18-164)||(29738793-29738941)
chr1 (15-164)||(45415343-45415494)
chr1 (2-172)||(34878421-34878592)
chr1 (15-172)||(1742065-1742223)
chr1 (18-172)||(18939109-18939263)
chr1 (15-165)||(10776614-10776768)
chr1 (15-172)||(14872423-14872583)
chr1 (3-101)||(35484600-35484698)
chr1 (5-172)||(51916801-51916970)
chr1 (15-164)||(45789349-45789498)
chr1 (30-141)||(7836947-7837059)
chr1 (15-165)||(26535184-26535330)
chr1 (52-164)||(32394820-32394933)
chr1 (12-162)||(21686654-21686804)
chr1 (11-165)||(44915425-44915582)
chr1 (15-172)||(49626694-49626852)
chr1 (55-172)||(8212059-8212178)
chr1 (39-172)||(15836001-15836135)
chr1 (20-172)||(23291792-23291943)
chr1 (26-96)||(41176977-41177047)
chr1 (10-99)||(3228049-3228138)
chr1 (16-164)||(5983621-5983772)
chr1 (24-164)||(11462604-11462747)
chr1 (15-164)||(35462194-35462346)
chr1 (15-165)||(27456324-27456477)
chr1 (15-172)||(44543057-44543213)
chr1 (12-165)||(34413247-34413402)
chr1 (10-172)||(12634946-12635109)
chr1 (15-164)||(21947775-21947925)
chr1 (52-165)||(50377149-50377261)
chr1 (15-172)||(940149-940307)
chr1 (15-163)||(34528503-34528650)
chr1 (10-101)||(32679321-32679412)
chr1 (12-162)||(568943-569094)
chr1 (30-172)||(31317550-31317693)
chr1 (18-95)||(4413091-4413168)
chr1 (26-158)||(36894404-36894535)
chr1 (10-108)||(6218042-6218140)
chr1 (190-220)||(15434974-15435004)
chr1 (124-165)||(34329609-34329650)
chr1 (53-101)||(31692685-31692733)
chr1 (119-164)||(35484548-35484595)
chr1 (100-172)||(36775866-36775938)
chr1 (10-42)||(47132694-47132726)
chr1 (124-172)||(48750083-48750131)
[»] chr7 (37 HSPs)
chr7 (15-172)||(19404904-19405062)
chr7 (3-172)||(47590085-47590253)
chr7 (23-165)||(37837615-37837758)
chr7 (8-164)||(30756976-30757134)
chr7 (15-165)||(42978391-42978544)
chr7 (15-164)||(34899764-34899912)
chr7 (10-164)||(9450294-9450450)
chr7 (16-164)||(12141464-12141615)
chr7 (21-164)||(48316969-48317114)
chr7 (10-159)||(8013627-8013778)
chr7 (16-164)||(48061206-48061357)
chr7 (10-171)||(4529857-4530020)
chr7 (3-164)||(13797089-13797251)
chr7 (10-148)||(19296656-19296796)
chr7 (10-161)||(39171751-39171905)
chr7 (3-172)||(39328942-39329113)
chr7 (10-172)||(22742716-22742879)
chr7 (10-164)||(40992960-40993116)
chr7 (32-171)||(24770055-24770195)
chr7 (14-172)||(5078544-5078702)
chr7 (10-172)||(24350993-24351156)
chr7 (52-172)||(35132771-35132892)
chr7 (52-172)||(1749293-1749412)
chr7 (6-101)||(25287403-25287498)
chr7 (26-161)||(38798584-38798717)
chr7 (53-158)||(38051231-38051336)
chr7 (80-163)||(25255086-25255169)
chr7 (81-162)||(45349962-45350044)
chr7 (113-172)||(48930661-48930721)
chr7 (15-98)||(3224642-3224725)
chr7 (10-163)||(5348747-5348896)
chr7 (15-70)||(45350445-45350500)
chr7 (29-99)||(9915941-9916011)
chr7 (29-99)||(9923853-9923923)
chr7 (3-44)||(24350695-24350737)
chr7 (190-219)||(19404857-19404886)
chr7 (52-108)||(22087137-22087193)
[»] chr8 (38 HSPs)
chr8 (10-164)||(31013726-31013882)
chr8 (15-172)||(27110611-27110770)
chr8 (10-157)||(10377475-10377623)
chr8 (23-164)||(37971086-37971226)
chr8 (15-163)||(25191223-25191372)
chr8 (8-172)||(45445959-45446124)
chr8 (15-128)||(17693807-17693919)
chr8 (15-164)||(20559901-20560050)
chr8 (15-164)||(20571463-20571612)
chr8 (15-161)||(28897494-28897642)
chr8 (22-165)||(3673236-3673379)
chr8 (17-164)||(7883395-7883544)
chr8 (18-161)||(23230430-23230575)
chr8 (10-171)||(14545050-14545215)
chr8 (6-99)||(8412571-8412664)
chr8 (15-164)||(40211460-40211612)
chr8 (15-154)||(8980980-8981121)
chr8 (15-164)||(20553401-20553551)
chr8 (22-172)||(29937905-29938056)
chr8 (16-128)||(15344090-15344202)
chr8 (16-128)||(15433155-15433267)
chr8 (16-128)||(15524459-15524571)
chr8 (22-165)||(33214786-33214930)
chr8 (22-172)||(7677428-7677579)
chr8 (6-154)||(8867603-8867752)
chr8 (15-128)||(1236886-1236999)
chr8 (9-101)||(29617677-29617769)
chr8 (14-172)||(24099410-24099567)
chr8 (15-163)||(1239560-1239709)
chr8 (52-99)||(8443743-8443789)
chr8 (57-108)||(8826033-8826084)
chr8 (20-99)||(41684221-41684300)
chr8 (21-91)||(27498565-27498635)
chr8 (16-70)||(36948688-36948742)
chr8 (84-172)||(26469344-26469430)
chr8 (52-172)||(40619220-40619340)
chr8 (124-172)||(14585593-14585641)
chr8 (12-64)||(41060482-41060534)
[»] chr6 (24 HSPs)
chr6 (3-164)||(12170265-12170428)
chr6 (10-164)||(33053325-33053481)
chr6 (15-164)||(605986-606137)
chr6 (10-164)||(3913731-3913886)
chr6 (3-164)||(23128388-23128551)
chr6 (12-164)||(32059688-32059840)
chr6 (3-164)||(68158-68320)
chr6 (23-165)||(30894427-30894570)
chr6 (10-160)||(29255603-29255755)
chr6 (15-146)||(29320037-29320173)
chr6 (11-172)||(24227860-24228024)
chr6 (16-164)||(7515358-7515509)
chr6 (21-172)||(34018348-34018501)
chr6 (10-101)||(32328805-32328896)
chr6 (10-172)||(1523185-1523346)
chr6 (55-172)||(30608663-30608780)
chr6 (15-99)||(9723602-9723687)
chr6 (20-172)||(127464-127611)
chr6 (52-131)||(32191924-32192003)
chr6 (3-72)||(9721761-9721830)
chr6 (16-172)||(4010651-4010807)
chr6 (22-72)||(9719643-9719693)
chr6 (90-158)||(34222653-34222721)
chr6 (15-99)||(27097834-27097918)
[»] chr3 (53 HSPs)
chr3 (10-162)||(10232846-10233000)
chr3 (10-164)||(45568601-45568757)
chr3 (10-162)||(40487101-40487254)
chr3 (10-172)||(47895927-47896091)
chr3 (10-162)||(9998242-9998397)
chr3 (10-164)||(21431401-21431556)
chr3 (10-172)||(35865083-35865246)
chr3 (3-164)||(6954853-6955016)
chr3 (10-162)||(10108014-10108166)
chr3 (10-170)||(47042203-47042365)
chr3 (15-165)||(33579649-33579800)
chr3 (10-164)||(48650891-48651048)
chr3 (10-164)||(52923274-52923428)
chr3 (10-162)||(10229250-10229406)
chr3 (18-164)||(12050804-12050953)
chr3 (3-161)||(40556480-40556640)
chr3 (7-160)||(7449063-7449217)
chr3 (7-160)||(7457205-7457359)
chr3 (5-155)||(32701269-32701421)
chr3 (3-164)||(36461588-36461751)
chr3 (20-164)||(9797686-9797830)
chr3 (39-164)||(54148793-54148920)
chr3 (15-164)||(21533966-21534116)
chr3 (3-164)||(43488747-43488917)
chr3 (10-164)||(31271964-31272120)
chr3 (15-108)||(38545616-38545709)
chr3 (1-172)||(50194433-50194605)
chr3 (21-171)||(7546397-7546550)
chr3 (10-172)||(21289970-21290132)
chr3 (5-172)||(23800058-23800230)
chr3 (22-164)||(26275951-26276094)
chr3 (15-172)||(629055-629214)
chr3 (52-172)||(20465119-20465238)
chr3 (3-172)||(29921820-29921992)
chr3 (3-172)||(29970973-29971145)
chr3 (10-93)||(43016631-43016714)
chr3 (15-99)||(953631-953715)
chr3 (3-50)||(20988028-20988075)
chr3 (27-165)||(37040575-37040704)
chr3 (16-69)||(9688488-9688541)
chr3 (52-172)||(20609039-20609168)
chr3 (114-164)||(36910798-36910850)
chr3 (10-45)||(1803246-1803281)
chr3 (10-172)||(51303789-51303951)
chr3 (134-172)||(1649321-1649359)
chr3 (75-165)||(25631646-25631735)
chr3 (15-172)||(29249024-29249182)
chr3 (15-45)||(53808140-53808170)
chr3 (52-101)||(4821625-4821674)
chr3 (3-44)||(36910934-36910975)
chr3 (80-108)||(29239184-29239212)
chr3 (113-165)||(44907518-44907569)
chr3 (15-98)||(46220459-46220543)
[»] chr4 (44 HSPs)
chr4 (3-164)||(26633828-26633990)
chr4 (15-164)||(2520578-2520729)
chr4 (14-172)||(26091063-26091222)
chr4 (2-164)||(22610972-22611135)
chr4 (10-164)||(4142912-4143067)
chr4 (10-164)||(19853669-19853824)
chr4 (10-172)||(5119134-5119299)
chr4 (15-165)||(54021662-54021814)
chr4 (22-165)||(9178165-9178310)
chr4 (16-164)||(22558621-22558772)
chr4 (10-164)||(53810824-53810980)
chr4 (3-164)||(21686398-21686560)
chr4 (22-165)||(9165198-9165344)
chr4 (15-163)||(10496143-10496292)
chr4 (10-172)||(35348102-35348265)
chr4 (10-164)||(13633910-13634067)
chr4 (25-164)||(43510010-43510151)
chr4 (5-172)||(22300636-22300804)
chr4 (10-164)||(24099227-24099384)
chr4 (6-94)||(56156782-56156870)
chr4 (10-164)||(32766309-32766466)
chr4 (4-172)||(45418319-45418486)
chr4 (10-172)||(27651744-27651907)
chr4 (10-125)||(48257647-48257762)
chr4 (10-172)||(51888366-51888529)
chr4 (29-172)||(10259044-10259188)
chr4 (15-99)||(33920853-33920937)
chr4 (54-164)||(56040801-56040915)
chr4 (5-101)||(21662276-21662371)
chr4 (5-101)||(21671040-21671135)
chr4 (16-164)||(22038958-22039105)
chr4 (3-71)||(51024713-51024781)
chr4 (14-172)||(36204531-36204689)
chr4 (3-172)||(18935576-18935745)
chr4 (67-171)||(36161567-36161670)
chr4 (16-128)||(53443928-53444039)
chr4 (6-101)||(29961151-29961246)
chr4 (15-170)||(9643178-9643338)
chr4 (3-89)||(1621719-1621805)
chr4 (15-101)||(47320623-47320709)
chr4 (10-99)||(9713697-9713786)
chr4 (124-165)||(52944223-52944264)
chr4 (116-165)||(40066211-40066262)
chr4 (73-165)||(52061077-52061167)
[»] chr2 (45 HSPs)
chr2 (3-172)||(43397270-43397439)
chr2 (3-164)||(4778532-4778695)
chr2 (10-164)||(7646258-7646415)
chr2 (21-164)||(18763265-18763409)
chr2 (10-164)||(7448034-7448189)
chr2 (10-164)||(4098889-4099045)
chr2 (15-164)||(1421462-1421617)
chr2 (3-172)||(35220110-35220276)
chr2 (10-164)||(31788242-31788398)
chr2 (10-164)||(36943281-36943437)
chr2 (20-164)||(7678029-7678181)
chr2 (10-172)||(11985380-11985543)
chr2 (14-164)||(9169415-9169566)
chr2 (3-129)||(12677490-12677616)
chr2 (3-154)||(27097573-27097725)
chr2 (28-164)||(37876755-37876893)
chr2 (10-172)||(29279720-29279883)
chr2 (10-172)||(12648074-12648237)
chr2 (39-164)||(38444982-38445108)
chr2 (66-164)||(19062510-19062608)
chr2 (15-162)||(32448782-32448929)
chr2 (18-107)||(5428084-5428173)
chr2 (10-172)||(14955309-14955472)
chr2 (15-97)||(31128974-31129056)
chr2 (80-172)||(1415421-1415514)
chr2 (15-165)||(8809073-8809224)
chr2 (10-172)||(10237363-10237525)
chr2 (23-172)||(24461238-24461386)
chr2 (15-172)||(4904295-4904444)
chr2 (11-70)||(42698928-42698987)
chr2 (16-102)||(41694407-41694493)
chr2 (10-172)||(17994865-17995029)
chr2 (15-163)||(18107896-18108044)
chr2 (15-89)||(36691657-36691732)
chr2 (3-45)||(23933869-23933911)
chr2 (52-98)||(36175666-36175712)
chr2 (15-99)||(28871987-28872069)
chr2 (52-172)||(37994103-37994223)
chr2 (73-172)||(3308788-3308888)
chr2 (15-98)||(37416493-37416576)
chr2 (75-164)||(4041752-4041842)
chr2 (134-172)||(31128929-31128967)
chr2 (10-99)||(25509291-25509379)
chr2 (124-165)||(29173876-29173917)
chr2 (22-70)||(4042230-4042278)
[»] scaffold0127 (1 HSPs)
scaffold0127 (3-161)||(15261-15420)
[»] chr5 (30 HSPs)
chr5 (3-171)||(7035996-7036166)
chr5 (3-164)||(38597566-38597728)
chr5 (3-164)||(13006997-13007160)
chr5 (20-172)||(38007143-38007295)
chr5 (21-172)||(26878228-26878380)
chr5 (15-162)||(6012297-6012446)
chr5 (17-164)||(34945204-34945353)
chr5 (10-162)||(26825204-26825360)
chr5 (15-164)||(31391913-31392065)
chr5 (10-172)||(14211009-14211169)
chr5 (26-164)||(9113882-9114022)
chr5 (10-164)||(25979933-25980089)
chr5 (10-172)||(11977086-11977250)
chr5 (10-172)||(15571261-15571425)
chr5 (10-172)||(39567071-39567234)
chr5 (27-172)||(8096647-8096792)
chr5 (3-164)||(24229942-24230107)
chr5 (15-172)||(7929979-7930134)
chr5 (3-165)||(13421711-13421874)
chr5 (52-172)||(2979462-2979583)
chr5 (10-164)||(41630286-41630433)
chr5 (24-164)||(11074057-11074199)
chr5 (17-172)||(6216676-6216838)
chr5 (10-172)||(28541062-28541219)
chr5 (65-164)||(10722603-10722705)
chr5 (24-143)||(35850574-35850694)
chr5 (24-170)||(4770927-4771077)
chr5 (3-172)||(8985082-8985257)
chr5 (191-220)||(9113824-9113853)
chr5 (124-172)||(28386830-28386877)
[»] scaffold0445 (1 HSPs)
scaffold0445 (10-172)||(1120-1283)
[»] scaffold0088 (1 HSPs)
scaffold0088 (3-164)||(50555-50718)
[»] scaffold0884 (1 HSPs)
scaffold0884 (16-158)||(2134-2279)
[»] scaffold0017 (1 HSPs)
scaffold0017 (10-164)||(32905-33061)
[»] scaffold0026 (1 HSPs)
scaffold0026 (3-164)||(72021-72184)
[»] scaffold0219 (1 HSPs)
scaffold0219 (20-161)||(14998-15141)
[»] scaffold0009 (1 HSPs)
scaffold0009 (15-172)||(58229-58387)
[»] scaffold0603 (1 HSPs)
scaffold0603 (16-172)||(7500-7655)
[»] scaffold0262 (1 HSPs)
scaffold0262 (19-172)||(1967-2121)
[»] scaffold0492 (1 HSPs)
scaffold0492 (39-172)||(12721-12855)
[»] scaffold0049 (1 HSPs)
scaffold0049 (56-171)||(71435-71549)
[»] scaffold0087 (1 HSPs)
scaffold0087 (3-127)||(25525-25649)
[»] scaffold0064 (1 HSPs)
scaffold0064 (10-98)||(19261-19348)
[»] scaffold0888 (1 HSPs)
scaffold0888 (10-172)||(1824-1987)
[»] scaffold0554 (1 HSPs)
scaffold0554 (27-171)||(10672-10815)
[»] scaffold0121 (1 HSPs)
scaffold0121 (29-172)||(31419-31565)
[»] scaffold0136 (1 HSPs)
scaffold0136 (116-165)||(37929-37979)


Alignment Details
Target: chr1 (Bit Score: 113; Significance: 2e-57; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 15435194 - 15435022
Alignment:
Q  1 tgagccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttg 100  Q
    ||||||||  ||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||    
T  15435194 tgagccggctctagttttttattgagagaaactccaacttctctcaaaaccttctttcttcttcattcatcaaggaggggcggttttaggtcattttttg 15435095  T
Q  101 atctagaactagccctctacatct-ttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    ||||||||  | |||||||||||| |||||||| ||||||||||||||| ||||| |||||||||||||||||    
T  15435094 atctagaatcaaccctctacatcttttttcccttttctttcaatctaaataagtgtttttcacataaatcaag 15435022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 172
Target Start/End: Original strand, 31983965 - 31984123
Alignment:
Q  16 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccc 115  Q
    |||||||||||||||||||||||||||||| |||| |||||||| |||  ||||||||||||  |||||||||||||||||||||| ||||||  | | |    
T  31983965 tttttagtgagagaaactccaacttctctctaaactttctttcttctttgttcatcaaggagaggtggttttaggtcattttttgacctagaagcacctc 31984064  T
Q  116 tctacatc--tttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    ||||||||  ||||||||| ||||||| ||||||| |||||||||||||||| ||||||    
T  31984065 tctacatctttttttcccttttctttcgatctaaataagtggttttcacatatatcaag 31984123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 7337983 - 7337820
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 102  Q
    |||||| |||| |||| |||||| ||||||| ||||||||||| |||| ||||||||||||| |||||| ||||||  ||||| || |||||||||||||    
T  7337983 agccggccctagttttctagtgaaagaaacttcaacttctctctaaactttctttctccttcgttcatcgaggagggatggttctatgtcattttttgat 7337884  T
Q  103 ctagaactagccctctacatctttttccctc--ttctttcaatctaaacaagtggttttcacat 164  Q
    ||||||  | |||||||||||||||| ||||  ||||||||||||||| |||||||||||||||    
T  7337883 ctagaatcacccctctacatcttttttcctcttttctttcaatctaaataagtggttttcacat 7337820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 164
Target Start/End: Complemental strand, 29738941 - 29738793
Alignment:
Q  18 tttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctc 117  Q
    ||||| ||||||||||||||| |||||| |||| ||||||||||||| |||||| |||||| |||||||||||||| ||||| | ||||||  | |||||    
T  29738941 tttagagagagaaactccaacatctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcaattttttacctagaatcacccctc 29738842  T
Q  118 tacatctttttccc--tcttctttcaatctaaacaagtggttttcacat 164  Q
    ||||||||||||||  | ||||||||||||||| |||||||||||||||    
T  29738841 tacatctttttcccctttttctttcaatctaaataagtggttttcacat 29738793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 45415343 - 45415494
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    |||| |||||||||||||| ||||||||||  |||| |||||||| |||| || ||| |||||| |||||||||||||||||||||||||||||  | ||    
T  45415343 ttttctagtgagagaaacttcaacttctctttaaactttctttcttcttcgtttatcgaggaggggtggttttaggtcattttttgatctagaatcaccc 45415442  T
Q  115 ctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    ||||||||||||||  |||| |||||||||| |||| |||||||||||||||    
T  45415443 ctctacatcttttttccccttttctttcaatttaaataagtggttttcacat 45415494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 172
Target Start/End: Complemental strand, 34878592 - 34878421
Alignment:
Q  2 gagccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 101  Q
    ||||||| |||| |||| |||||||||||||||||||||||||  |||| ||||||||| ||| |||||| |||||| ||||||||||||||||||||||    
T  34878592 gagccggccctagttttctagtgagagaaactccaacttctctttaaactttctttctctttcgttcatcgaggaggggtggttttaggtcattttttga 34878493  T
Q  102 tctagaactagccctctacatc-tttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
     ||||||  |  | |||||||| ||||||| | |||||||||| |||| |||||||||||||| | ||||||    
T  34878492 cctagaatcactcatctacatcttttttccattttctttcaatttaaataagtggttttcacacatatcaag 34878421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 1742065 - 1742223
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    |||| ||||||||||||||| ||||||| || |||| | ||||||| ||| |||||||||||   |||||||||||||||||||||| ||||||  | ||    
T  1742065 ttttctagtgagagaaactcaaacttctttctaaacttcctttctctttcgttcatcaaggaatggtggttttaggtcattttttgacctagaatcaccc 1742164  T
Q  115 ctctacatctttt-tccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    |||| ||||||||  |||| ||||||||||||||| |||||||||||||||| ||||||    
T  1742165 ctctccatcttttcccccttttctttcaatctaaataagtggttttcacatatatcaag 1742223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 18939109 - 18939263
Alignment:
Q  18 tttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctc 117  Q
    |||||||||||||||| || |||||||| ||   |||||||||||||||| ||| |||||  |||||||||||||||||||||||||||||  | | |||    
T  18939109 tttagtgagagaaacttcaccttctctctaagttttctttctccttcattaatcgaggagaggtggttttaggtcattttttgatctagaatcacctctc 18939208  T
Q  118 tacatctttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    | ||||||||||||  |||||||||| |||| |||| ||||||||| | ||||||    
T  18939209 tgcatctttttcccctttctttcaatttaaataagtagttttcacacatatcaag 18939263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 165
Target Start/End: Complemental strand, 10776768 - 10776614
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    |||||||| |||||||||||||| ||||||| |||| |||||||||||||||||||| |||| | |||||||||| ||||||||||| ||||||  | ||    
T  10776768 ttttttagggagagaaactccaatttctctctaaactttctttctccttcattcatcgaggaagggtggttttagatcattttttgacctagaatcaccc 10776669  T
Q  115 ctctacatcttttt----ccctcttctttcaatctaaacaagtggttttcacata 165  Q
     |||||||||||||    |  | ||||||||||||||| |||||||||| |||||    
T  10776668 atctacatcttttttttcctattttctttcaatctaaataagtggtttttacata 10776614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 14872423 - 14872583
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    |||||||||||||||||||||||||||| ||  ||| |||||||| ||||||||||| || |||||||||||| |||||||||||||  |||||  |  |    
T  14872423 ttttttagtgagagaaactccaacttctttctgaactttctttcttcttcattcatcgagaaggtgtggttttcggtcattttttgacttagaatcactc 14872522  T
Q  115 ctctacatcttttt---ccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    ||||||||||||||   || | |||||||||| |||| |||||||||| ||| | ||||||    
T  14872523 ctctacatctttttttccctttttctttcaatgtaaataagtggtttttacaaatatcaag 14872583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 35484698 - 35484600
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 101  Q
    |||||| |||| |||| |||||||||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||| |||||||||||||||    
T  35484698 agccggccctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttgtaggtcattttttga 35484600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 172
Target Start/End: Complemental strand, 51916970 - 51916801
Alignment:
Q  5 ccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatct 104  Q
    |||| |||| ||||||||||||||||||| ||| || |||| |||| ||||||||||||| |||||  |||||| |||||||||||  ||||||||| ||    
T  51916970 ccggccctagttttttagtgagagaaacttcaatttttctctaaactttctttctccttcgttcatagaggaggggtggttttaggctattttttgacct 51916871  T
Q  105 agaactagccctctacatc--tttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    | ||  |  | ||||||||  |||||| || ||||||||||||||| |||||||||||| ||||||||||    
T  51916870 aaaatcactcatctacatctttttttctcttttctttcaatctaaataagtggttttcaaataaatcaag 51916801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 45789349 - 45789498
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    |||||||||||||||||||| |  ||||||| |||  || ||||| ||||||||||| ||||    ||||||||||||||||||||| ||||||  | ||    
T  45789349 ttttttagtgagagaaactctacgttctctctaaattttatttctacttcattcatcgaggattgatggttttaggtcattttttgacctagaatcaccc 45789448  T
Q  115 ctctacatctttttccctcttctttcaatctaaacaagtggttttcacat 164  Q
    |||| ||||||||||||  |||||||||| |||| |||||||||||||||    
T  45789449 ctctgcatctttttcccctttctttcaatttaaataagtggttttcacat 45789498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 7837059 - 7836947
Alignment:
Q  30 aactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatc-ttttt 128  Q
    |||||||||||||||| |||||||||||||| ||| |||||| |||| | |||||||||||||||||||||||||||||  | ||||| ||||| |||||    
T  7837059 aactccaacttctctctaaaccttctttctctttcgttcatcgaggaagggtggttttaggtcattttttgatctagaatcacccctcgacatctttttt 7836960  T
Q  129 ccctcttctttca 141  Q
    |||| ||||||||    
T  7836959 cccttttctttca 7836947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 165
Target Start/End: Original strand, 26535184 - 26535330
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    |||| ||||||||||||||| |||||||||| |||| |||| |||||||| ||||||||||| | |||||||||||     |||||| ||||||  |  |    
T  26535184 ttttctagtgagagaaactctaacttctctctaaactttctctctccttcgttcatcaaggatgagtggttttagg-----ttttgacctagaatcacac 26535278  T
Q  115 ctctacatctttttc-cctcttctttcaatctaaacaagtggttttcacata 165  Q
     |||||||||||||| ||| ||||||||||||||| ||||||||||||||||    
T  26535279 atctacatctttttctccttttctttcaatctaaataagtggttttcacata 26535330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 164
Target Start/End: Original strand, 32394820 - 32394933
Alignment:
Q  52 ttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatcttttt-ccctcttctttcaatctaaaca 150  Q
    ||||||||||||| |||||| |||||| ||||||||||||||||||||||  |||||  | |||||| ||||||||| |||| |||||||||||||||      
T  32394820 ttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacttagaatcatccctctgcatctttttccccttttctttcaatctaaatg 32394919  T
Q  151 agtggttttcacat 164  Q
    ||||||||||||||    
T  32394920 agtggttttcacat 32394933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 162
Target Start/End: Original strand, 21686654 - 21686804
Alignment:
Q  12 taattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaacta 111  Q
    |||||||||||||||||||||| |||||| | || |||  ||||||||| ||| |||||| |||||   || ||||||||||||||||||||||||| |     
T  21686654 taattttttagtgagagaaactgcaacttttttctaaattttctttctctttcgttcatcgaggagagatgattttaggtcattttttgatctagaa-tc 21686752  T
Q  112 gccctctacatc-tttttccctcttctttcaatctaaacaagtggttttcac 162  Q
     | ||||||||| ||||||| | |||||||||| |||| |||||||||||||    
T  21686753 actctctacatcttttttccattttctttcaatttaaataagtggttttcac 21686804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 165
Target Start/End: Original strand, 44915425 - 44915582
Alignment:
Q  11 ctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtg-tggttttaggtcattttttgatctagaac 109  Q
    |||||||| |||||||| ||| | ||||||||||| |||| ||||||||| |||||||||| |||||| | ||||||||||||||||||||   || ||     
T  44915425 ctaattttctagtgagaaaaatttcaacttctctctaaactttctttctcattcattcatcgaggaggggttggttttaggtcattttttggcttaaaat 44915524  T
Q  110 tagccctctacatctttttccctct--tctttcaatctaaacaagtggttttcacata 165  Q
     | | |||||||||||||| |||||  |||||| ||||||| ||||||||||| ||||    
T  44915525 catcactctacatcttttttcctcttatctttccatctaaataagtggttttcgcata 44915582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 49626694 - 49626852
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    |||||| |||||||||||||||||||||||| ||   ||| ||||| |||| ||||| |||||| |||||||||||||||| ||||| ||| ||  | ||    
T  49626694 tttttttgtgagagaaactccaacttctctctaagtgttccttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaatcaccc 49626793  T
Q  115 ctctacatc-tttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    |||| |||| ||||||||  ||||||| ||||||| ||||| |||||||| | ||||||    
T  49626794 ctctgcatcttttttcccctttctttctatctaaataagtgattttcacaaatatcaag 49626852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 8212178 - 8212059
Alignment:
Q  55 tttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatct--ttttccctcttctttcaatctaaacaag 152  Q
    |||||||||||||||||||||||| ||| |||||| | ||||||||||||| ||  | | ||||||||||  |||| ||| |||||| |||||||| |||    
T  8212178 tttctccttcattcatcaaggaggggtgcttttagattattttttgatctacaatcacctctctacatcttttttttccttttctttaaatctaaataag 8212079  T
Q  153 tggttttcacataaatcaag 172  Q
    ||||||||||||| ||||||    
T  8212078 tggttttcacatatatcaag 8212059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 39 - 172
Target Start/End: Original strand, 15836001 - 15836135
Alignment:
Q  39 ttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatctttttc-cctcttct 137  Q
    |||||||  ||| ||||||||| || |||||||||||||  |||||||||||||||||||||| ||||||  | | || ||||| |||||| ||| ||||    
T  15836001 ttctctcttaactttctttctctttgattcatcaaggagaggtggttttaggtcattttttgacctagaatcaccgctatacatatttttctccttttct 15836100  T
Q  138 ttcaatctaaacaagtggttttcacataaatcaag 172  Q
     ||||| |||| |||||||||||||||| ||||||    
T  15836101 atcaatttaaataagtggttttcacatacatcaag 15836135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 172
Target Start/End: Complemental strand, 23291943 - 23291792
Alignment:
Q  20 tagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggtt---ttaggtcattttttgatctagaactagccct 116  Q
    ||||||||||||||||||||     | |||| ||||||||||||| |||||| || | | ||||||   |||||||||||||||| ||||||  | ||||    
T  23291943 tagtgagagaaactccaact-----ctaaactttctttctccttcgttcatcgagaaagggtggttattttaggtcattttttgacctagaatcacccct 23291849  T
Q  117 ctacatctttttcc-ctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    | |||||||||| | || ||||||||||||||| |||||||||||||||| ||||||    
T  23291848 cgacatcttttttctcttttctttcaatctaaataagtggttttcacatatatcaag 23291792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 41176977 - 41177047
Alignment:
Q  26 gagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattt 96  Q
    |||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||||||    
T  41176977 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattt 41177047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 3228049 - 3228138
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 99  Q
    |||| |||| |||| ||| ||||||||||||||| | |||  || |||||||||||||||||||||||| ||||||||||||||||||||    
T  3228049 cctagttttctagttagaaaaactccaacttctccctaaattttatttctccttcattcatcaaggaggggtggttttaggtcatttttt 3228138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 5983621 - 5983772
Alignment:
Q  16 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccc 115  Q
    ||||||| ||||||||||  |||||||||| |||| || |||||||||| |||||| ||||||  ||||||||| ||||||||||| ||||||  |  |     
T  5983621 tttttagagagagaaactttaacttctctctaaactttatttctccttcgttcatcgaggagggatggttttagatcattttttgacctagaatcactcg 5983720  T
Q  116 tctacatcttttt---ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    |||||||||||||   || | ||||||| ||||||| || ||||||||||||    
T  5983721 tctacatcttttttcccctttttctttcgatctaaataaatggttttcacat 5983772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 24 - 164
Target Start/End: Complemental strand, 11462747 - 11462604
Alignment:
Q  24 gagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatc 123  Q
    |||||||||| ||| ||||||| |||| ||||||||||||| |||||  | |||| ||| |||||||| ||||||||| ||||||  | |||||| ||||    
T  11462747 gagagaaacttcaatttctctctaaactttctttctccttcgttcattgacgaggggtgattttaggttattttttgacctagaatcacccctctgcatc 11462648  T
Q  124 ttttt---ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    |||||   || | ||||||||||||||| |||||| ||||||||    
T  11462647 ttttttcccctttttctttcaatctaaataagtgggtttcacat 11462604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 35462346 - 35462194
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatc-tagaactagc 113  Q
    |||||||||| ||||||||| ||||| |||| |||| ||||||||||||| || ||  || | | ||||||||||||||||||||   | |||||  | |    
T  35462346 ttttttagtgggagaaactctaacttatctctaaactttctttctccttcgtttattgagaatgggtggttttaggtcattttttttacatagaatcatc 35462247  T
Q  114 cctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    |||||||||||||||  |||| |||||||||| |||| |||||||||||||||    
T  35462246 cctctacatcttttttccccttttctttcaatttaaataagtggttttcacat 35462194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 165
Target Start/End: Original strand, 27456324 - 27456477
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtc-attttttgatctagaactagc 113  Q
    ||||||||||||| ||||| |||||||| || |||| ||||||||||||||||| || ||||||  ||||||||  ||  |||||| | ||| ||  |      
T  27456324 ttttttagtgagaaaaacttcaacttctttctaaactttctttctccttcattcgtcgaggagggatggttttaactctttttttttacctaaaatcact 27456423  T
Q  114 cctctacatctttttccctc--ttctttcaatctaaacaagtggttttcacata 165  Q
    ||||||||||||||| ||||  ||||||||||||||| ||||||||||| ||||    
T  27456424 cctctacatcttttttcctcttttctttcaatctaaataagtggttttcgcata 27456477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 44543057 - 44543213
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    ||||||||||||||||||||||||||||||| ||   ||| ||||| |||| ||||| |||| | ||| |||||||| ||| ||||| ||| ||  || |    
T  44543057 ttttttagtgagagaaactccaacttctctctaagttttccttctctttcactcatcgaggaagggtgcttttaggttattctttgacctaaaatcag-c 44543155  T
Q  115 ctctacatctttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    |||| ||||||||| ||  ||||||| ||||||| ||||| |||||||| | ||||||    
T  44543156 ctctgcatcttttttccctttctttcgatctaaataagtgattttcacaaatatcaag 44543213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 165
Target Start/End: Complemental strand, 34413402 - 34413247
Alignment:
Q  12 taattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaacta 111  Q
    |||||||||||||||||||||||   |||||||| ||   || |||||| |||| | ||| || ||| ||| |||||||||| ||||| ||||||||  |    
T  34413402 taattttttagtgagagaaactctgccttctctctaagttttttttctctttcacttatcgagtaggggtgattttaggtcaattttttatctagaatca 34413303  T
Q  112 gccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacata 165  Q
     |||||| |||||||||  |||  ||||||||||||||| ||||| ||||||||||    
T  34413302 cccctctgcatctttttttcccctttctttcaatctaaataagtgattttcacata 34413247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 172
Target Start/End: Original strand, 12634946 - 12635109
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||||||||||||||||||| |||||||||| |    || |||||| |||| || || |||| |||||||||||||||||||| ||| ||| ||     
T  12634946 cctagttttttagtgagagaaactcaaacttctctctatgttttttttctctttcactcgtcgaggatgtgtggttttaggtcattttctgacctataat 12635045  T
Q  110 tagccctctacatc-tttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
     | |||| | |||| ||||||||  || | |||||||||| ||||| |||||||||| ||||||    
T  12635046 cacccctttgcatcttttttcccaattttgtcaatctaaataagtgattttcacatatatcaag 12635109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 21947925 - 21947775
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    |||| |||||||||||||| ||| || |||| |||| ||||||||| ||| |||||| |||| | |||||||||||| ||||||  | ||||||  | ||    
T  21947925 ttttctagtgagagaaacttcaatttttctctaaactttctttctc-ttcgttcatcgaggatgggtggttttaggttattttta-acctagaatcatcc 21947828  T
Q  115 ctctacatcttttt---ccctcttctttcaatctaaacaagtggttttcacat 164  Q
     ||||||| |||||   |||| ||||||||||||||| |||||||||||||||    
T  21947827 atctacatatttttttccccttttctttcaatctaaataagtggttttcacat 21947775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 165
Target Start/End: Original strand, 50377149 - 50377261
Alignment:
Q  52 ttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatctttttccc-tcttctttcaatctaaaca 150  Q
    ||||||||||||| |||||| | ||||  ||||||||||||||||||||| ||||||  | |||||| ||| |||||||| | |||||||||| |||| |    
T  50377149 ttctttctccttcgttcatcgaagagga-tggttttaggtcattttttgacctagaatcatccctct-catttttttcccattttctttcaatttaaata 50377246  T
Q  151 agtggttttcacata 165  Q
    |||||||||||||||    
T  50377247 agtggttttcacata 50377261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 940149 - 940307
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    ||||||||||||| |||||| || ||||||| |||  ||||||||| ||  |||||| |||| | ||||||||| |||||||||| | ||||||  | ||    
T  940149 ttttttagtgagaaaaactctaaattctctctaaattttctttctcttttcttcatcgaggatgagtggttttaagtcatttttt-acctagaatcaccc 940247  T
Q  115 ctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
     ||| |||||| ||  |||| |||||| ||| |||| |||||||||||||||| ||||||    
T  940248 atctgcatcttgtttccccttttcttttaatttaaataagtggttttcacatatatcaag 940307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 34528503 - 34528650
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    ||||||||||| ||| |||||||||||| ||  |   |||||| || |||| ||||| | || | ||||||||| |||||||||||| ||||||  | ||    
T  34528503 ttttttagtgaaagagactccaacttctgtcttagttttctttttctttcactcatcgaagatgagtggttttatgtcattttttgacctagaatcaccc 34528602  T
Q  115 ctctacatctttttccctcttctttcaatctaaacaagtggttttcaca 163  Q
    |||| ||||||||||||| ||||||| ||||||| ||||| ||| ||||    
T  34528603 ctctgcatctttttccct-ttctttcgatctaaataagtgatttccaca 34528650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 32679412 - 32679321
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 101  Q
    |||| ||||||||||||||||| |||||||| |||| ||   ||||||||| |||| || || |||||| ||||||||| ||||||||||||    
T  32679412 cctagttttttagtgagagaaattccaacttttctctaagttttctttctctttcactcgtcgaggaggggtggttttatgtcattttttga 32679321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 162
Target Start/End: Complemental strand, 569094 - 568943
Alignment:
Q  12 taattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtg-tggttttaggtca-ttttttgatctagaac 109  Q
    ||||| || ||||||||||||| ||||||||||  |||  ||||||||| |||| ||||| |||||| | |||||||| ||   |||||| | ||||||     
T  569094 taattgttcagtgagagaaacttcaacttctctataaat-ttctttctctttcactcatctaggagggggtggttttaagtatgtttttttacctagaat 568996  T
Q  110 tagccctctacatctttttccctcttctttcaatctaaacaagtggttttcac 162  Q
       |||||||||||||||||||  ||||||||||||||| ||||| |||||||    
T  568995 cccccctctacatctttttcccctttctttcaatctaaataagtgattttcac 568943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 31317550 - 31317693
Alignment:
Q  30 aactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagc-cctctacatcttttt 128  Q
    |||||||  ||||||| |||  ||||||||| |||||||||| ||| | | ||||||||||| |||| ||||  |||||  | | ||||| |||||||||    
T  31317550 aactccacattctctctaaattttctttctctttcattcatcgaggcgttatggttttaggtaatttgttgacatagaatcacctcctctgcatcttttt 31317649  T
Q  129 ccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    ||   |||||||||| |||| |||||||||||||| | ||||||    
T  31317650 cctcattctttcaatttaaataagtggttttcacacatatcaag 31317693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 4413091 - 4413168
Alignment:
Q  18 tttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatt 95  Q
    ||||| ||||||||||| ||||| |||| |||| |||||||| |||| || ||| |||||| || |||||||||||||    
T  4413091 tttagagagagaaactctaacttttctctaaactttctttcttcttcgtttatcgaggaggagtagttttaggtcatt 4413168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 158
Target Start/End: Complemental strand, 36894535 - 36894404
Alignment:
Q  26 gagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatctt 125  Q
    |||||||| ||||||||||  |||  |||||||||| |   ||||| | |||| |||||| || |||||||||||| |||||   | |||||||||||||    
T  36894535 gagaaacttcaacttctctttaaattttctttctccgt---tcatcgaagaggggtggttctaagtcattttttgacctagagtcacccctctacatctt 36894439  T
Q  126 tttccctc--ttctttcaatctaaacaagtggttt 158  Q
    ||| ||||  ||||||| ||||||| |||||||||    
T  36894438 ttttcctcttttctttcgatctaaataagtggttt 36894404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 6218140 - 6218042
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 108  Q
    ||||||||||||||||| |||| |||||||||||||  ||   ||||| || || | |||||||||||   || |||||| ||||||||||| ||||||    
T  6218140 cctaattttttagtgagggaaattccaacttctctcttaattatctttttcattaactcatcaaggagagatgattttagttcattttttgacctagaa 6218042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 220
Target Start/End: Complemental strand, 15435004 - 15434974
Alignment:
Q  190 agtgatttcgtcgtctaagtgcggcgttctg 220  Q
    |||||||||||||||||||||||||||||||    
T  15435004 agtgatttcgtcgtctaagtgcggcgttctg 15434974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 165
Target Start/End: Original strand, 34329609 - 34329650
Alignment:
Q  124 tttttccctcttctttcaatctaaacaagtggttttcacata 165  Q
    |||||||||||||||||||| |||| || |||||||||||||    
T  34329609 tttttccctcttctttcaatttaaataaatggttttcacata 34329650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 31692733 - 31692685
Alignment:
Q  53 tctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 101  Q
    |||||||| |||| ||||| |||| ||||| ||||||||||||||||||    
T  31692733 tctttctctttcactcatcgaggatgtgtgattttaggtcattttttga 31692685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 35484595 - 35484548
Alignment:
Q  119 acatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    ||||||||||  |||| ||||||||||||||| |||||||||||||||    
T  35484595 acatctttttttcccttttctttcaatctaaataagtggttttcacat 35484548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 36775938 - 36775866
Alignment:
Q  100 gatctagaactagccctctacatctttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    |||||||||  | |||||| ||||||||| ||  ||||||||||||||| || || |||||||||| ||||||    
T  36775938 gatctagaatcacccctctgcatcttttttccctttctttcaatctaaataaatgattttcacatacatcaag 36775866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 47132694 - 47132726
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttct 42  Q
    |||| ||||||||||||||||||||||||||||    
T  47132694 cctagttttttagtgagagaaactccaacttct 47132726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 48750083 - 48750131
Alignment:
Q  124 tttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    ||||||||  ||||||||||||||| ||||| |||||||||| ||||||    
T  48750083 tttttcccctttctttcaatctaaataagtgattttcacatacatcaag 48750131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 1e-46; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 19405062 - 19404904
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||  || ||| |||||||||||||||||||||| ||||||  | ||    
T  19405062 ttttttagtgagagaaactccaacttctctctaaatcttctttctccttaattcattgagaaggggtggttttaggtcattttttgacctagaatcaccc 19404963  T
Q  115 ctctacatct-ttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    |||||||||| |||| ||| ||||||||||||||| |||||||||||||||||||||||    
T  19404962 ctctacatctttttttccttttctttcaatctaaataagtggttttcacataaatcaag 19404904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 3 - 172
Target Start/End: Original strand, 47590085 - 47590253
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 102  Q
    ||||||||| | ||||||||||||||||| ||||||||||||| |||  ||||||||| ||| |||||  |||||| ||| |||||||||| |||||||     
T  47590085 agccggtccaagttttttagtgagagaaattccaacttctctctaaattttctttctcattcgttcatagaggaggggtgattttaggtca-tttttgaa 47590183  T
Q  103 ctagaactagccctctacatctttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    ||||||  | |||||||||| ||||||||| ||||||||||||||| |||||||||||||||| ||||||    
T  47590184 ctagaatcacccctctacatttttttccctattctttcaatctaaataagtggttttcacatatatcaag 47590253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 23 - 165
Target Start/End: Complemental strand, 37837758 - 37837615
Alignment:
Q  23 tgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacat 122  Q
    ||||||||||||||||||||||| |||| || |||||||||| |||||  |||||| |||||||||||||||||||||| ||||||  | ||||||||||    
T  37837758 tgagagaaactccaacttctctctaaactttatttctccttcgttcattgaggaggggtggttttaggtcattttttgacctagaatcacccctctacat 37837659  T
Q  123 ct-ttttccctcttctttcaatctaaacaagtggttttcacata 165  Q
    || |||||||| ||||||||||||||| ||||||||| ||||||    
T  37837658 cttttttcccttttctttcaatctaaataagtggtttacacata 37837615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 8 - 164
Target Start/End: Complemental strand, 30757134 - 30756976
Alignment:
Q  8 gtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctaga 107  Q
    |||||| |||||||||| |||||||| ||||||||||| |||  ||||||||| ||| |||||| |||||| |||||||||||| ||||||||| |||||    
T  30757134 gtcctagttttttagtgggagaaacttcaacttctctctaaattttctttctctttcgttcatcgaggaggggtggttttaggtaattttttgacctaga 30757035  T
Q  108 actagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    |  | ||||||||||||||||  |||| ||||||||||||||| ||||| |||||||||    
T  30757034 atcacccctctacatcttttttccccttttctttcaatctaaataagtgattttcacat 30756976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 15 - 165
Target Start/End: Original strand, 42978391 - 42978544
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    |||| ||||||||||||||| |||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||||||||||| ||||||  | |     
T  42978391 ttttctagtgagagaaactctaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacca 42978490  T
Q  115 ctctacatcttttt---ccctcttctttcaatctaaacaagtggttttcacata 165  Q
    ||||||||||||||   |||| |||  |||||||||| ||||||||||||||||    
T  42978491 ctctacatctttttctccccttttcgatcaatctaaataagtggttttcacata 42978544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 34899912 - 34899764
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    |||||||||| |||||||||||||||||||| |||| ||||||||||||| |||| |   || | |||||||||||||||||||||| ||||||  | ||    
T  34899912 ttttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcacc---gatgagtggttttaggtcattttttgacctagaatcaccc 34899816  T
Q  115 ctctacatc--tttttccctcttctttcaatctaaacaagtggttttcacat 164  Q
    |||||||||  ||||||||| ||||||||||||||| |||||||||||||||    
T  34899815 ctctacatctttttttcccttttctttcaatctaaataagtggttttcacat 34899764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 10 - 164
Target Start/End: Complemental strand, 9450450 - 9450294
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    ||||||||| ||||||||||||||||||||||| |  |||| ||||||||||||| |||||| ||||||  ||||||||||||||||||||| ||||||     
T  9450450 cctaattttctagtgagagaaactccaacttctttttaaactttctttctccttcgttcatcgaggagggatggttttaggtcattttttgacctagaat 9450351  T
Q  110 tagccctctacatct--ttttccctcttctttcaatctaaacaagtggttttcacat 164  Q
     | || |||||||||  ||| |||| ||||||||||||||| ||||| |||||||||    
T  9450350 cacccatctacatcttgtttccccttttctttcaatctaaataagtgattttcacat 9450294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 12141615 - 12141464
Alignment:
Q  16 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccc 115  Q
    ||||||| |||||||||||||||||||||| |||| ||||||||||||| |||||| | |||| ||||||||||||||||||||||  |||||  | |||    
T  12141615 tttttagagagagaaactccaacttctctctaaactttctttctccttcgttcatcgaagaggggtggttttaggtcattttttgacatagaatcacccc 12141516  T
Q  116 tctacatctttttccc---tcttctttcaatctaaacaagtggttttcacat 164  Q
    ||||||||||||| ||   | || |||||||||||| |||||||||||||||    
T  12141515 tctacatcttttttcccttttttatttcaatctaaataagtggttttcacat 12141464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 21 - 164
Target Start/End: Complemental strand, 48317114 - 48316969
Alignment:
Q  21 agtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctac 120  Q
    ||||| |||||||| |||||||||| |||  | ||||||||||| ||||||||||||| ||||||||||||||||||| || ||||||  | ||||||||    
T  48317114 agtgaaagaaactctaacttctctctaaatttgctttctccttcgttcatcaaggaggggtggttttaggtcatttttggacctagaatcacccctctac 48317015  T
Q  121 atcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    ||||||||  |||| |||||||||| |||| |||||||||||||||    
T  48317014 atctttttcccccttttctttcaatttaaataagtggttttcacat 48316969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 10 - 159
Target Start/End: Complemental strand, 8013778 - 8013627
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| ||||||||||||||||||| ||||||||||| |||| |||||||| |||  |||||| |||||| |||||||||| ||||||||||| ||||||     
T  8013778 cctagttttttagtgagagaaacttcaacttctctctaaactttctttcttctttgttcatcgaggaggggtggttttagatcattttttgacctagaat 8013679  T
Q  110 tagccctctacatct--ttttccctcttctttcaatctaaacaagtggtttt 159  Q
     | ||||||||||||  |||||||| |||||||| |||||| ||||| ||||    
T  8013678 cacccctctacatctttttttcccttttctttcagtctaaataagtgatttt 8013627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 48061206 - 48061357
Alignment:
Q  16 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccc 115  Q
    ||||||| |||||||||||||||||||||| |||| |||||| |||||| |||||| |||||  ||||||||||||||||||||||  |||||  | |||    
T  48061206 tttttagagagagaaactccaacttctctctaaactttctttatccttcgttcatcgaggagaggtggttttaggtcattttttgacttagaatcacccc 48061305  T
Q  116 tctacatcttttt---ccctcttctttcaatctaaacaagtggttttcacat 164  Q
     |||||| |||||   || | ||||||||||||||| |||||||||||||||    
T  48061306 actacatattttttcccctttttctttcaatctaaataagtggttttcacat 48061357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 171
Target Start/End: Original strand, 4529857 - 4530020
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||| |||||||||||||| || |||||||| ||  ||||||||||||||||||||||| |||  ||| ||||||||||||||||||  ||||||    
T  4529857 cctagttttctagtgagagaaacttcaccttctctctaagtcttctttctccttcattcatcaaagagaggtgattttaggtcattttttgacatagaac 4529956  T
Q  110 tagccctctacatc-tttttccctc-ttctttcaatctaaacaagtggttttcacataaatcaa 171  Q
     | ||| ||||||| |||||||||| ||||||||||||||  ||||  |||||||||| |||||    
T  4529957 catcccgctacatcttttttccctctttctttcaatctaagtaagtatttttcacatatatcaa 4530020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 13797251 - 13797089
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 102  Q
    ||||||||||| |||| |||||||||||||| ||||||||||  |||  ||||||||| ||| |||||| |||| |  ||||||||||||||||||| |     
T  13797251 agccggtcctagttttctagtgagagaaacttcaacttctctttaaattttctttctcgttcgttcatcgaggatggatggttttaggtcattttttaac 13797152  T
Q  103 ctagaactagccctctacatcttttt-ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    ||||||  | |||||||||||||||| |||| |||||||||| |||| ||||| |||| ||||    
T  13797151 ctagaatcacccctctacatctttttccccttttctttcaatttaaataagtgattttaacat 13797089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 10 - 148
Target Start/End: Original strand, 19296656 - 19296796
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||||||||| |||||||||||||||| ||| ||   || ||| |||||| |||||| |||||| |||||||||||||||||||||| ||||||     
T  19296656 cctagttttttagtgggagaaactccaacttccctctaatttttttttgtccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaat 19296755  T
Q  110 tagccctctacatcttttt--ccctcttctttcaatctaaa 148  Q
     | ||||||||||||||||  |||| |||||||||||||||    
T  19296756 cacccctctacatcttttttccccttttctttcaatctaaa 19296796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 39171905 - 39171751
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||| |||||||| |||||||||| | |||| |||| |||||||| |||| |||||| |||||| |||||| ||||||||||||||| ||||||     
T  39171905 cctagttttctagtgagataaactccaacgtatctctaaactttctttcttcttcgttcatcgaggaggggtggttgtaggtcattttttgacctagaat 39171806  T
Q  110 tagccctctacatct---ttttccctcttctttcaatctaaacaagtggttttca 161  Q
     | ||||||||||||   |||||| | ||||||| ||||||| ||||||||||||    
T  39171805 cacccctctacatcttttttttcctttttctttcgatctaaataagtggttttca 39171751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 172
Target Start/End: Complemental strand, 39329113 - 39328942
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtc-attttttga 101  Q
    |||||| ||||||||| ||||||||||||||| ||||| | || |||| ||||||||||||  |||||| |||||| |||| ||||||||  |||||| |    
T  39329113 agccggccctaattttctagtgagagaaactcaaacttttttctaaactttctttctcctttgttcatcgaggaggagtgggtttaggtcttttttttta 39329014  T
Q  102 tctagaactagccctctacatc-tttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
     |||||| || || ||| |||| ||||||||| |||||||||| |||| |||||||||||||| | ||||||    
T  39329013 cctagaattacccatctgcatcttttttcccttttctttcaatttaaataagtggttttcacacatatcaag 39328942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 10 - 172
Target Start/End: Original strand, 22742716 - 22742879
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    ||||||||||||||||||||||||     ||||||| ||   ||||| ||| |||||||||| |||||| ||| |||||||||| ||||| ||||||||     
T  22742716 cctaattttttagtgagagaaactatgtattctctctaagttttcttcctctttcattcatcgaggaggggtgattttaggtcaatttttaatctagaat 22742815  T
Q  110 tagccctctacatctttttccctctt-ctttcaatctaaacaagtggttttcacataaatcaag 172  Q
     | |||||| ||||||||| || ||| ||||||||||||| ||||| |||||||||| ||||||    
T  22742816 cacccctctgcatcttttttcccctttctttcaatctaaataagtgattttcacatacatcaag 22742879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 164
Target Start/End: Original strand, 40992960 - 40993116
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||| ||||| |||||||||||||||||||| |||| ||  |||| |||| |||||| |||| | || ||||||||||||||||||| ||| ||     
T  40992960 cctagttttctagtgggagaaactccaacttctctctaaactttagttcttcttcgttcatcgaggatg-gtagttttaggtcattttttgacctaaaat 40993058  T
Q  110 tagccctctacatcttttt---ccctcttctttcaatctaaacaagtggttttcacat 164  Q
     |  |||||||||||||||   | || ||||||||||||||| |||||||||||||||    
T  40993059 cactcctctacatctttttttccacttttctttcaatctaaataagtggttttcacat 40993116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 171
Target Start/End: Original strand, 24770055 - 24770195
Alignment:
Q  32 ctccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatc-tttttcc 130  Q
    |||||||||||||| |||| ||||||||| ||| |||||| ||  || ||| |||||||||||||| |||  |||||  | || |||||||| |||||      
T  24770055 ctccaacttctctctaaactttctttctcattcgttcatcgagacggggtgattttaggtcattttatgacttagaatcatccatctacatctttttttt 24770154  T
Q  131 ctcttctttcaatctaaacaagtggttttcacataaatcaa 171  Q
    || ||||||||||||||| |||||||||||||||| |||||    
T  24770155 cttttctttcaatctaaataagtggttttcacatatatcaa 24770195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 5078702 - 5078544
Alignment:
Q  14 attttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagc 113  Q
    |||||||||||||||||||| ||||||||||| ||    ||||| || |||| |||| ||||| | ||| |||||||||||||||||| ||||||  | |    
T  5078702 attttttagtgagagaaacttcaacttctctctaagttctctttatctttcactcattaaggaagggtgattttaggtcattttttgacctagaatcacc 5078603  T
Q  114 cctctacatctttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    ||||| ||||||| || |  || |||| ||||||| ||||| |||| ||||| ||||||    
T  5078602 cctctgcatctttctctccattatttcgatctaaataagtgatttttacatatatcaag 5078544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 172
Target Start/End: Complemental strand, 24351156 - 24350993
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||||||||||||||||||||||||   |||||||  ||   ||||| |||  ||| ||||| |||||| ||| |||||||||| ||||||| ||||||     
T  24351156 cctaattttttagtgagagaaactctgtcttctctttaagttttcttcctctctcactcatcgaggaggggtgattttaggtcaatttttgacctagaat 24351057  T
Q  110 tagccctctacatc--tttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
     | |||| | ||||  ||||||||| ||||||||||||||| ||||| |||||||||| ||||||    
T  24351056 cacccctgtgcatccttttttccct-ttctttcaatctaaataagtgattttcacatacatcaag 24350993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 172
Target Start/End: Original strand, 35132771 - 35132892
Alignment:
Q  52 ttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatc-tttttccctcttctttcaatctaaaca 150  Q
    ||||| ||| |||| ||||| |||||| ||| |||||||||| ||||||| ||||||  | ||||||||||| ||||||||  |||||| |||||||| |    
T  35132771 ttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcacccctctacatcttttttcccctttcttttaatctaaata 35132870  T
Q  151 agtggttttcacataaatcaag 172  Q
    |||| |||||||||| ||||||    
T  35132871 agtgattttcacatacatcaag 35132892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 172
Target Start/End: Complemental strand, 1749412 - 1749293
Alignment:
Q  52 ttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatctttttccctcttctttcaatctaaacaa 151  Q
    ||||| ||| |||| ||||| |||||| ||| |||||||||| ||||||| ||||||  | ||| || ||||||||| ||  ||||||||||||||| ||    
T  1749412 ttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaatca-cccgcttcatcttttttccctttctttcaatctaaataa 1749314  T
Q  152 gtggttttcacataaatcaag 172  Q
    ||| |||||||||| ||||||    
T  1749313 gtgattttcacatacatcaag 1749293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 101
Target Start/End: Complemental strand, 25287498 - 25287403
Alignment:
Q  6 cggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 101  Q
    ||||||||||||||||||||||||||||  |||||||||  |||  ||||||||||||||||| || | |||  ||||||||| || ||| |||||    
T  25287498 cggtcctaattttttagtgagagaaactataacttctctataaattttctttctccttcattcgtcgaagagaggtggttttaagttattatttga 25287403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 38798584 - 38798717
Alignment:
Q  26 gagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatct- 124  Q
    ||||||||||||||||| ||  ||| ||||||||| ||| ||||||   ||||  ||||||||||||||| |||||  |||||  | || |||||||||     
T  38798584 gagaaactccaacttctgtctgaactttctttctcattcgttcatc---gagggatggttttaggtcattctttgacatagaatcacccatctacatctc 38798680  T
Q  125 ttttccctcttctttcaatctaaacaagtggttttca 161  Q
    |||||| | |||||||||| |||| ||||||||||||    
T  38798681 ttttcctttttctttcaatttaaataagtggttttca 38798717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 158
Target Start/End: Complemental strand, 38051336 - 38051231
Alignment:
Q  53 tctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatctttttccctcttctttcaatctaaacaag 152  Q
    ||||||| ||||| |||| ||||||| ||||||||||||||| |||| | ||||||  | || |||||||| |||||||  |||||| |||||||| | |    
T  38051336 tctttcttcttcactcattaaggaggggtggttttaggtcatattttaacctagaatcacccatctacatcattttcccctttcttttaatctaaatatg 38051237  T
Q  153 tggttt 158  Q
    ||||||    
T  38051236 tggttt 38051231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 163
Target Start/End: Original strand, 25255086 - 25255169
Alignment:
Q  80 gtggttttaggtcattttttgatctagaactagccctctacatctttttccctcttctttcaatctaaacaagtggttttcaca 163  Q
    |||||||||||||||||||||| ||| ||  | |||| | ||||||||||||  |||||||||| |||| |||| |||||||||    
T  25255086 gtggttttaggtcattttttgacctataatcacccctttgcatctttttcccctttctttcaatttaaataagttgttttcaca 25255169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 45350044 - 45349962
Alignment:
Q  81 tggttttaggtcattttttgatctagaactagccctctacatc-tttttccctcttctttcaatctaaacaagtggttttcac 162  Q
    ||||||||||||||||||||| ||||||  | || ||||| || ||||||| | |||||||||| |||| |||||||||||||    
T  45350044 tggttttaggtcattttttgacctagaatcacccatctacttcttttttcctttttctttcaatttaaataagtggttttcac 45349962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 48930661 - 48930721
Alignment:
Q  113 ccctctacatctttttccctctt-ctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    |||||||||||||||| || ||| ||||||||||||| ||||| |||||||||| ||||||    
T  48930661 ccctctacatcttttttcccctttctttcaatctaaataagtgattttcacatacatcaag 48930721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 3224725 - 3224642
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt 98  Q
    ||||||||||||||||| |||||||| | || |||  ||||||||| |||| || || | || | |||||||||||||||||||    
T  3224725 ttttttagtgagagaaattccaacttttttctaaattttctttctctttcactcttcgaagatgggtggttttaggtcattttt 3224642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 163
Target Start/End: Complemental strand, 5348896 - 5348747
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| ||||||||||| ||||||| || ||||| |  ||   |||||||||||| ||||||| |||||  || ||||||||| | ||||||| ||||||     
T  5348896 cctagttttttagtgaaagaaacttcatcttctttttaagttttctttctcctttattcatcgaggagaggt-gttttaggtaagtttttgacctagaat 5348798  T
Q  110 tagccctctacatctttttccctcttctttcaatctaaacaagtggttttcaca 163  Q
     | ||||   ||||||||| ||| |||||||||| |||| ||||| ||||||||    
T  5348797 cacccct---catcttttttccttttctttcaatttaaataagtgattttcaca 5348747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 45350500 - 45350445
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcat 70  Q
    |||| |||||||||||||| ||||||||||| |||| || |||||||||| |||||    
T  45350500 ttttctagtgagagaaacttcaacttctctctaaactttttttctccttcgttcat 45350445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 9915941 - 9916011
Alignment:
Q  29 aaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 99  Q
    ||||||||||||||||| |||| ||||||||||||| || ||| ||||||  |  ||||||||| ||||||    
T  9915941 aaactccaacttctctccaaactttctttctccttcgtttatcgaggagggttaattttaggtcttttttt 9916011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 9923853 - 9923923
Alignment:
Q  29 aaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 99  Q
    ||||||||||||||||| |||| ||||||||||||| || ||| ||||||  |  ||||||||| ||||||    
T  9923853 aaactccaacttctctccaaactttctttctccttcgtttatcgaggagggttaattttaggtcttttttt 9923923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 24350695 - 24350737
Alignment:
Q  3 agccggtcctaatttt-ttagtgagagaaactccaacttctct 44  Q
    |||||| ||||||||| ||||||||||||||||||||||||||    
T  24350695 agccggccctaatttttttagtgagagaaactccaacttctct 24350737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 219
Target Start/End: Complemental strand, 19404886 - 19404857
Alignment:
Q  190 agtgatttcgtcgtctaagtgcggcgttct 219  Q
    ||||||||||||||||||||||||||||||    
T  19404886 agtgatttcgtcgtctaagtgcggcgttct 19404857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 22087137 - 22087193
Alignment:
Q  52 ttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 108  Q
    |||||||||||||||| ||| | ||||  ||||||| ||||||||||||| ||||||    
T  22087137 ttctttctccttcatttatcgaagagggatggtttttggtcattttttgacctagaa 22087193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 5e-46; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 10 - 164
Target Start/End: Complemental strand, 31013882 - 31013726
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||| |||||||||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||||||||||| ||||||     
T  31013882 cctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaat 31013783  T
Q  110 tagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
     | ||||||||||||||||  |||| ||||||||||||||| |||||||||||||||    
T  31013782 cacccctctacatctttttcccccttttctttcaatctaaataagtggttttcacat 31013726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 27110770 - 27110611
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    |||| |||||||||||||||||||||||||| |||| |||||||||||||||||||| | || | |||||||||||||||||||||||||| ||  |  |    
T  27110770 ttttctagtgagagaaactccaacttctctctaaactttctttctccttcattcatcgaagatgggtggttttaggtcattttttgatctaaaatcacac 27110671  T
Q  115 ctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
     |||||||||||||  | || ||||||||||||||| ||||||| |||||||| ||||||    
T  27110670 atctacatcttttttactcttttctttcaatctaaataagtggtcttcacatatatcaag 27110611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 157
Target Start/End: Original strand, 10377475 - 10377623
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||| ||||| |||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||||||||||| |||||||    
T  10377475 cctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaac 10377574  T
Q  110 tagccctctacatctttttccctct--tctttcaatctaaacaagtggtt 157  Q
     | |  |||||||||||||||| ||  |||||||||||||| ||||||||    
T  10377575 -accaatctacatctttttcccccttctctttcaatctaaataagtggtt 10377623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 37971086 - 37971226
Alignment:
Q  23 tgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacat 122  Q
    ||||||||||||||||||||||| |||  |||||||| |||||||||||   |||| |||||||||||||||||||||| ||||||  | ||||||||||    
T  37971086 tgagagaaactccaacttctctctaaattttctttcttcttcattcatc---gaggagtggttttaggtcattttttgacctagaatcacccctctacat 37971182  T
Q  123 cttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    ||||||  |||| ||||||||||||||| ||||| |||||||||    
T  37971183 cttttttccccttttctttcaatctaaataagtgattttcacat 37971226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 25191372 - 25191223
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||  |||||| |||||  ||| |||||||||||||||||| ||||||  | ||    
T  25191372 ttttttagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggagaggtgattttaggtcattttttgacctagaatcaccc 25191273  T
Q  115 ctctacatct-ttttccctcttctttcaatctaaacaagtggttttcaca 163  Q
     ||||||||| |||||||| |||||||||  |||| ||||| ||||||||    
T  25191272 atctacatcttttttcccttttctttcaaattaaataagtgattttcaca 25191223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 172
Target Start/End: Complemental strand, 45446124 - 45445959
Alignment:
Q  8 gtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctaga 107  Q
    |||||| |||| |||||||||||||||||||||||||| |||| ||||||||||||| |||||| |||| | || |||||| ||||||||||||  ||||    
T  45446124 gtcctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaagggtagttttatgtcattttttgacataga 45446025  T
Q  108 actagccctctacatct-ttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    |  | | |||||||||| |||||||| || ||||||| |||  |||||||||||||| | ||||||    
T  45446024 atcatctctctacatcttttttcccttttatttcaatttaattaagtggttttcacacatatcaag 45445959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 17693919 - 17693807
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||  |||||| || |||||||||||| |||||| ||||||  | ||    
T  17693919 ttttttagtgagagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggttgttttaggtcat-ttttgacctagaatcatcc 17693821  T
Q  115 ctctacatcttttt 128  Q
    ||||||||||||||    
T  17693820 ctctacatcttttt 17693807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 20560050 - 20559901
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    |||| ||| ||||||||| |||||||||||| |||| || ||||| |||| |||||| | |||| |||||||||| |||||||| || ||||||  | ||    
T  20560050 ttttctagggagagaaacaccaacttctctctaaactttttttcttcttcgttcatcgatgaggggtggttttagatcatttttggacctagaatcaccc 20559951  T
Q  115 ctctacatctttttccctcttctttcaatctaaacaagtggttttcacat 164  Q
    |||||||| |||| |||| ||||||||||||||| ||||| |||||||||    
T  20559950 ctctacattttttccccttttctttcaatctaaataagtgattttcacat 20559901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 20571612 - 20571463
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    |||| ||| ||||||||| |||||||||||| |||| || ||||| |||| |||||| | |||| |||||||||| |||||||| || ||||||  | ||    
T  20571612 ttttctagggagagaaacaccaacttctctctaaactttttttcttcttcgttcatcgatgaggggtggttttagatcatttttggacctagaatcaccc 20571513  T
Q  115 ctctacatctttttccctcttctttcaatctaaacaagtggttttcacat 164  Q
    |||||||| |||| |||| ||||||||||||||| ||||| |||||||||    
T  20571512 ctctacattttttccccttttctttcaatctaaataagtgattttcacat 20571463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 161
Target Start/End: Original strand, 28897494 - 28897642
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    ||||||| ||||||||||| |||||||| |  ||||  || |||| |||||||| || |||||| ||||||||| |||||||||||||||| ||  | ||    
T  28897494 ttttttaatgagagaaacttcaacttctttttaaactctcgttcttcttcattcgtcgaggaggggtggttttaagtcattttttgatctaaaatcaccc 28897593  T
Q  115 ctctacatctttttccctc--ttctttcaatctaaacaagtggttttca 161  Q
    |||||||||||||| ||||  ||||||||||||||| ||||||||||||    
T  28897594 ctctacatcttttttcctcttttctttcaatctaaataagtggttttca 28897642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 165
Target Start/End: Original strand, 3673236 - 3673379
Alignment:
Q  22 gtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctaca 121  Q
    |||| ||||||| ||||||||||| |||| |||||||||||| ||||||| | ||||  ||||||||||||| ||||||| ||||||  | |||||||||    
T  3673236 gtgaaagaaacttcaacttctctctaaactttctttctcctttattcatcgaagagggttggttttaggtca-tttttgacctagaatcatccctctaca 3673334  T
Q  122 tctttt-tccctcttctttcaatctaaacaagtggttttcacata 165  Q
    ||||||  |||| ||||||||||||||| |||||||| |||||||    
T  3673335 tcttttgccccttttctttcaatctaaataagtggttatcacata 3673379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 164
Target Start/End: Complemental strand, 7883544 - 7883395
Alignment:
Q  17 ttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccct 116  Q
    ||||||||||||||||| |||||||| || |||  ||||||||| ||| |||||| | || | ||||||||||||||| |||||||||| ||  | ||||    
T  7883544 ttttagtgagagaaacttcaacttctttctaaattttctttctcattcgttcatcgatgatgagtggttttaggtcat-ttttgatctataatcacccct 7883446  T
Q  117 ctacatc-tttttccctc--ttctttcaatctaaacaagtggttttcacat 164  Q
    ||||||| ||||||||||  ||||||||||||||| |||||||||||||||    
T  7883445 ctacatcttttttccctcttttctttcaatctaaataagtggttttcacat 7883395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 23230430 - 23230575
Alignment:
Q  18 tttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctc 117  Q
    ||||| |||||||||||||||||||||| |||| ||||||||||||| |||||| |||| | || ||||||||||| ||||||| | | ||  | |||||    
T  23230430 tttagagagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggt-gttttaggtcaatttttgaccaaaaatcacccctc 23230528  T
Q  118 tacatcttttt---ccctcttctttcaatctaaacaagtggttttca 161  Q
    |||||||||||   || | ||||||||||||||| ||||||||||||    
T  23230529 tacatcttttttcccctttttctttcaatctaaataagtggttttca 23230575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 171
Target Start/End: Complemental strand, 14545215 - 14545050
Alignment:
Q  10 cctaatttttta-gtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 108  Q
    |||||||||||| ||  |||||||||||||||||||| |||     |||||||||||||| | ||||| | |||||||||||||||||||||| ||| ||    
T  14545215 cctaattttttaagttcgagaaactccaacttctctctaaaaaaaatttctccttcattcgttaaggatgagtggttttaggtcattttttgacctaaaa 14545116  T
Q  109 ctagcc-ctctacatctttttccctctt--ctttcaatctaaacaagtggttttcacataaatcaa 171  Q
      | || ||||||||||||||  |||||  ||||||||||||| |||||||||||||||| |||||    
T  14545115 tcaccctctctacatctttttttctcttttctttcaatctaaataagtggttttcacatatatcaa 14545050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 8412664 - 8412571
Alignment:
Q  6 cggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 99  Q
    |||||||| |||| ||||||||||||||| |||||||||| |||| ||||||||| ||| |||||| || ||| ||||||||||||||||||||    
T  8412664 cggtcctagttttctagtgagagaaactctaacttctctctaaactttctttctcattcgttcatcgagtaggggtggttttaggtcatttttt 8412571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 40211612 - 40211460
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtca-ttttttgatctagaactagc 113  Q
    |||| |||||||||||||||||| ||||||  |||  ||||||||||||| || ||| |||||| |||| ||||||| | |||||||| ||||||  | |    
T  40211612 ttttctagtgagagaaactccaatttctctttaaaatttctttctccttcgttaatcgaggaggggtggctttaggtaatttttttgacctagaatcacc 40211513  T
Q  114 cctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    |||||||||||||||  | || ||||||||||||||| ||| |||||||||||    
T  40211512 cctctacatcttttttactcttttctttcaatctaaataagcggttttcacat 40211460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 154
Target Start/End: Original strand, 8980980 - 8981121
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    ||||||||||||||||||||||||||||||| ||   ||| ||||| |||| || || |||||| |||||||||||||||||||||| ||| ||  | ||    
T  8980980 ttttttagtgagagaaactccaacttctctctaagttttcgttctcattcactcgtcgaggaggggtggttttaggtcattttttgacctaaaatcaccc 8981079  T
Q  115 ctctacatc--tttttccctcttctttcaatctaaacaagtg 154  Q
    || | ||||  |||| |||| ||||||||||||||| |||||    
T  8981080 ctatgcatcctttttccccttttctttcaatctaaataagtg 8981121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 20553551 - 20553401
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    |||| ||| ||||||||| |||||||||||  |||| || ||||| |||| |||||| |||||| |||||||||| |||||||| || ||||||  | ||    
T  20553551 ttttctagggagagaaacaccaacttctctttaaactttttttcttcttcgttcatcgaggaggggtggttttagatcatttttggacctagaatcaccc 20553452  T
Q  115 ctctaca-tctttttccctcttctttcaatctaaacaagtggttttcacat 164  Q
    | | ||| | ||||||||| ||||||||||||||| ||||| |||||||||    
T  20553451 cacaacattttttttcccttttctttcaatctaaataagtgattttcacat 20553401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 172
Target Start/End: Original strand, 29937905 - 29938056
Alignment:
Q  22 gtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctaca 121  Q
    |||||||||||||||| ||||||  |||| |||||||| |||| |||||  |||| | |||||||||| ||| ||||||| ||||||  | |||||||||    
T  29937905 gtgagagaaactccaatttctctttaaactttctttctacttcgttcattgaggatgggtggttttagatca-tttttgacctagaatcacccctctaca 29938003  T
Q  122 tcttttt--ccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    |||||||   ||| ||||||||| ||||| |||||||||||| ||| ||||||    
T  29938004 tcttttttcgccttttctttcaacctaaataagtggttttcatatatatcaag 29938056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 15344090 - 15344202
Alignment:
Q  16 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccc 115  Q
    |||||||||||||||||||||||||||||| ||   ||  ||||| |||| ||||| |||||| |||||||||||||||| ||||| ||| || || |||    
T  15344090 tttttagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccc 15344189  T
Q  116 tctacatcttttt 128  Q
    ||| |||||||||    
T  15344190 tctgcatcttttt 15344202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 15433155 - 15433267
Alignment:
Q  16 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccc 115  Q
    |||||||||||||||||||||||||||||| ||   ||  ||||| |||| ||||| |||||| |||||||||||||||| ||||| ||| || || |||    
T  15433155 tttttagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccc 15433254  T
Q  116 tctacatcttttt 128  Q
    ||| |||||||||    
T  15433255 tctgcatcttttt 15433267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 15524459 - 15524571
Alignment:
Q  16 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccc 115  Q
    |||||||||||||||||||||||||||||| ||   ||  ||||| |||| ||||| |||||| |||||||||||||||| ||||| ||| || || |||    
T  15524459 tttttagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccc 15524558  T
Q  116 tctacatcttttt 128  Q
    ||| |||||||||    
T  15524559 tctgcatcttttt 15524571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 165
Target Start/End: Complemental strand, 33214930 - 33214786
Alignment:
Q  22 gtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtc-attttttgatctagaactagccctctac 120  Q
    |||||| ||||| ||| ||||||| |||| ||||||||||||| |||||| |||| | |||||||||||||  ||||||||  |||||  |  | |||||    
T  33214930 gtgagacaaacttcaatttctctctaaactttctttctccttcgttcatcgaggatgggtggttttaggtcttttttttgacttagaatcattcatctac 33214831  T
Q  121 atctttttccctcttctttcaatctaaacaagtggttttcacata 165  Q
    |||||||||||| |||||||||| |||| ||||| ||||| ||||    
T  33214830 atctttttcccttttctttcaatttaaataagtgattttcgcata 33214786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 172
Target Start/End: Complemental strand, 7677579 - 7677428
Alignment:
Q  22 gtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctaca 121  Q
    |||||| |||||| || ||||||| |||  |||||||| |||| |||||  |||||| |||||||||||||||||||||| ||||||  | |||||||||    
T  7677579 gtgagataaactctaatttctctctaaattttctttcttcttcgttcattgaggaggggtggttttaggtcattttttgacctagaatcacccctctaca 7677480  T
Q  122 tctttttc-cctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    |||  ||| | | ||||||| ||||||| || | ||||||||||| ||||||    
T  7677479 tctcattcactttttctttcgatctaaataaattgttttcacatatatcaag 7677428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 8867603 - 8867752
Alignment:
Q  6 cggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatcta 105  Q
    |||||||| ||||||||| ||||||||| ||  ||||||| ||   ||||||||| ||||| |||| || | | ||| ||||| ||||||||||||||||    
T  8867603 cggtcctagttttttagttagagaaactacacattctctctaagttttctttctctttcatccatcgagtatgagtgattttaagtcattttttgatcta 8867702  T
Q  106 gaactagccctctacatctt--tttccctcttctttcaatctaaacaagtg 154  Q
    |||  |||| || |||||||  ||||||| ||||||||||||||| |||||    
T  8867703 gaatcagccatcaacatctttgtttccct-ttctttcaatctaaataagtg 8867752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 1236999 - 1236886
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    ||||||||||||||||||| ||||||||||| ||   ||| ||||| |||  ||||  |||||| |||||||||||||||| ||||| ||| ||  | ||    
T  1236999 ttttttagtgagagaaacttcaacttctctctaagttttccttctctttcgctcattgaggaggggtggttttaggtcattctttgacctaaaataatcc 1236900  T
Q  115 ctctacatcttttt 128  Q
    |||| |||||||||    
T  1236899 ctctgcatcttttt 1236886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 29617769 - 29617677
Alignment:
Q  9 tcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 101  Q
    ||||| ||||||||||||||||| | ||||||||||| |||  || |||||| |||| | ||| | ||| ||| |||||||||||||||||||    
T  29617769 tcctagttttttagtgagagaaatttcaacttctctctaaattttgtttctctttcacttatcgaagagatgttgttttaggtcattttttga 29617677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 24099567 - 24099410
Alignment:
Q  14 attttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagc 113  Q
    |||||||||||||||||||| ||||||||||| |    ||||||||| |||| ||||| || ||| |||| ||||||||| ||||||| ||||||  | |    
T  24099567 attttttagtgagagaaacttcaacttctctctaggttttctttctctttcaatcatcgagtagg-gtggctttaggtca-tttttgacctagaatcacc 24099470  T
Q  114 cctctacatctttttccctc-ttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    ||||| ||| || || |||| ||||||| || |||| ||||| ||| |||||| ||||||    
T  24099469 cctctgcattttgtttcctctttctttcgatttaaataagtgatttccacatagatcaag 24099410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 1239709 - 1239560
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    ||||| ||||||||||||| ||||||||||| ||   ||| ||||| | |  ||||| |||||| ||||||||||||| || ||||| ||| ||  | ||    
T  1239709 tttttaagtgagagaaacttcaacttctctctaagttttccttctcttccgctcatcgaggaggggtggttttaggtccttctttgacctaaaatcaccc 1239610  T
Q  115 ctctacatc-tttttccctcttctttcaatctaaacaagtggttttcaca 163  Q
    |||| |||| ||||||||  ||| ||| ||||||| ||||| ||||||||    
T  1239609 ctctgcatcttttttcccctttcgttcgatctaaataagtgattttcaca 1239560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 99
Target Start/End: Complemental strand, 8443789 - 8443743
Alignment:
Q  52 ttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 99  Q
    ||||||||| ||||||||||||| ||| ||||||||||||||||||||    
T  8443789 ttctttctctttcattcatcaag-aggggtggttttaggtcatttttt 8443743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 8826033 - 8826084
Alignment:
Q  57 tctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 108  Q
    |||| |||| ||||| |||| | |||||||||||||||||||||||||||||    
T  8826033 tctctttcactcatcgaggatgggtggttttaggtcattttttgatctagaa 8826084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 41684221 - 41684300
Alignment:
Q  20 tagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 99  Q
    |||||||||||||||||||||| ||  |  | ||||||||||||||||||| ||||    |||||||||||||| |||||    
T  41684221 tagtgagagaaactccaacttccctttaggctttctttctccttcattcataaagggtaagtggttttaggtcagttttt 41684300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 27498635 - 27498565
Alignment:
Q  21 agtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggt 91  Q
    ||||||||||||| |||||| |||  || | |||||||||||||||||||| | |||| | ||||||||||    
T  27498635 agtgagagaaacttcaacttatctttaagctttctttctccttcattcatcgatgaggggcggttttaggt 27498565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 36948742 - 36948688
Alignment:
Q  16 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcat 70  Q
    |||||||||||| ||||| ||||||||||  |||| |||||||||||| ||||||    
T  36948742 tttttagtgagacaaacttcaacttctctttaaactttctttctcctttattcat 36948688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 26469430 - 26469344
Alignment:
Q  84 ttttaggtcattttttgatctagaactagccctctacatctttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    |||||||||||||||||| ||||||  | || |||  || ||||||| ||||  ||||||||||| ||||| |||||||||| ||||||    
T  26469430 ttttaggtcattttttgacctagaatcatccatctgaatttttttccttctt--ttcaatctaaataagtgattttcacatatatcaag 26469344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 172
Target Start/End: Complemental strand, 40619340 - 40619220
Alignment:
Q  52 ttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacat-ctttttccctcttctttcaatctaaaca 150  Q
    |||||||||||| ||||||| | || |  ||  ||||||||| ||||||| ||||||  | ||||||||||  |||||| || |||| |||||||||| |    
T  40619340 ttctttctcctttattcatcgaagatggatgaatttaggtca-tttttgacctagaatcatccctctacatattttttctcttttctatcaatctaaata 40619242  T
Q  151 agtggttttcacataaatcaag 172  Q
    |||| |||||||||| ||||||    
T  40619241 agtgattttcacatatatcaag 40619220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 14585593 - 14585641
Alignment:
Q  124 tttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    |||||| || ||||||||||||||| ||||| |||||||||| ||||||    
T  14585593 tttttctcttttctttcaatctaaataagtgattttcacatacatcaag 14585641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 41060534 - 41060482
Alignment:
Q  12 taattttttagtgagagaaactccaacttctctcaaaaccttctttctccttc 64  Q
    |||||||||||||||||||||| || | |||||| |||  |||||||||||||    
T  41060534 taattttttagtgagagaaacttcatcatctctctaaaatttctttctccttc 41060482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 2e-45; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 12170265 - 12170428
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 102  Q
    |||||| |||| |||| |||||||||||||||||||||||||| | || ||||||||||||| |||||| |||||| ||||||||||||||||||||||     
T  12170265 agccggccctagttttctagtgagagaaactccaacttctctctagactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgac 12170364  T
Q  103 ctagaactagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    ||||||  | ||||||||||||||||  |||| ||||||||||||||| |||||||||||||||    
T  12170365 ctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcacat 12170428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 10 - 164
Target Start/End: Complemental strand, 33053481 - 33053325
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||| ||||| |||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||||||||||| ||||||     
T  33053481 cctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaat 33053382  T
Q  110 tagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
     | ||||||||||||||||  |||| ||||||||||||||| |||||||||||||||    
T  33053381 catccctctacatcttttttccccttttctttcaatctaaataagtggttttcacat 33053325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 605986 - 606137
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    |||| ||||| ||||||||||||||| |||| |||| ||||||||||||| |||||| |||||| ||| ||||| |||||||||||| |||| |  | ||    
T  605986 ttttctagtgggagaaactccaacttttctctaaactttctttctccttcgttcatcgaggaggggtgattttatgtcattttttgacctaggatcaccc 606085  T
Q  115 ctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    ||||||||||||||  |||| ||||||||||||||| |||||||||||||||    
T  606086 ctctacatcttttttccccttttctttcaatctaaataagtggttttcacat 606137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 164
Target Start/End: Complemental strand, 3913886 - 3913731
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||| |||||||||||||||||||||||||| |||| ||||||||||||  |||||| |||||| |||||||||||||||||||||| ||||||     
T  3913886 cctagttttctagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggagg-gtggttttaggtcattttttgacctagaat 3913788  T
Q  110 tagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
     | |||||  |||||||||  || |  |||||||||||||| |||||||||||||||    
T  3913787 cacccctccgcatcttttttcccattctctttcaatctaaataagtggttttcacat 3913731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 23128388 - 23128551
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 102  Q
    ||||||| ||| | || ||||| ||||||||| |||||||||| |||| ||||||||||||| |||||  ||||||  | |||||||||||||||||||     
T  23128388 agccggttctagtattctagtgggagaaactctaacttctctctaaactttctttctccttcgttcattgaggagggatagttttaggtcattttttgac 23128487  T
Q  103 ctagaactagccctctacatctttttccc--tcttctttcaatctaaacaagtggttttcacat 164  Q
    ||||||  | |||||||||||||||||||  | |||||||| |||||| |||||||||||||||    
T  23128488 ctagaatcacccctctacatctttttccccattttctttcattctaaataagtggttttcacat 23128551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 12 - 164
Target Start/End: Original strand, 32059688 - 32059840
Alignment:
Q  12 taattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaacta 111  Q
    ||||||| |||||||||||| ||||| ||||||  |||| ||||||||| |||||||||| ||||   ||||||||| |||||| ||||| ||||||  |    
T  32059688 taattttctagtgagagaaattccaagttctctttaaacattctttctctttcattcatcgaggataggtggttttaagtcattgtttgacctagaatca 32059787  T
Q  112 gccctctacatctttttccctcttctttcaatctaaacaagtggttttcacat 164  Q
     || ||||||||||||||||| ||||||||||||||| |||| ||||||||||    
T  32059788 tccttctacatctttttcccttttctttcaatctaaataagtagttttcacat 32059840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 68320 - 68158
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 102  Q
    |||||| |||| |||||||||  |||||||||||||||||||| |||| ||||||||||||| |||||| ||||||  ||||||||||| | |||||||     
T  68320 agccggccctagttttttagtaggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagggatggttttaggt-aatttttgac 68222  T
Q  103 ctagaa-ctagccctctacatcttttt-ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    |||||| |   |||||||||||||||| |||| |||||| |||||||| |||||||||||||||    
T  68221 ctagaatcaccccctctacatctttttccccttttcttttaatctaaataagtggttttcacat 68158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 165
Target Start/End: Original strand, 30894427 - 30894570
Alignment:
Q  23 tgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacat 122  Q
    ||||||||||| ||||||||||| |||| || |||||||||| || ||| |||||| |||||||||| ||||||||||| ||||||  | ||||||||||    
T  30894427 tgagagaaacttcaacttctctctaaacttt-tttctccttcgttaatcgaggaggggtggttttagatcattttttgacctagaatcacccctctacat 30894525  T
Q  123 c--tttttccctcttctttcaatctaaacaagtggttttcacata 165  Q
    |  ||||||||| ||||||||||||||| || |||||||||||||    
T  30894526 ctgtttttcccttttctttcaatctaaataactggttttcacata 30894570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 10 - 160
Target Start/End: Complemental strand, 29255755 - 29255603
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||  |||||||||||| |||||| | ||| |||||||||| |||||| ||||||||| ||     
T  29255755 cctaactttctagtgagagaaattccaacttctctccaaactctctttctccttcgttcatcgaagagatgtggttttatgtcattctttgatctaaaat 29255656  T
Q  110 tagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttc 160  Q
     |  | |||||||||||||  |||| ||||||||||||||| |||||||||||    
T  29255655 cattcatctacatctttttcccccttttctttcaatctaaataagtggttttc 29255603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 146
Target Start/End: Complemental strand, 29320173 - 29320037
Alignment:
Q  15 ttttttagtgagagaaactcc---aacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaacta 111  Q
    ||||||| |||||||||||||   |||||||||  |||| ||||||||||||| |||||| |||| | ||||||||||||||| |||||||||||||  |    
T  29320173 ttttttaatgagagaaactcctccaacttctctttaaactttctttctccttcgttcatcgaggatgggtggttttaggtcatattttgatctagaatca 29320074  T
Q  112 gccctctacatcttttt--ccctcttctttcaatcta 146  Q
     ||||||||||||||||  |||| |||||||||||||    
T  29320073 cccctctacatcttttttccccttttctttcaatcta 29320037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 172
Target Start/End: Complemental strand, 24228024 - 24227860
Alignment:
Q  11 ctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatt--ttttgatctagaa 108  Q
    ||||||||||| || | ||||||||||||| |||| || | || ||||| |||||||||||||||||| ||||||||||||||||  |||| |  || ||    
T  24228024 ctaattttttaatgggcgaaactccaacttttctccaagctttatttcttcttcattcatcaaggaggagtggttttaggtcatttttttttacataaaa 24227925  T
Q  109 ctagccctctacatctttttccctc-ttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
      ||||||||||||||||| ||| | |||||||||  |||| |||||||||||||||| ||||||    
T  24227924 tcagccctctacatcttttcccccctttctttcaacttaaataagtggttttcacatatatcaag 24227860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 7515509 - 7515358
Alignment:
Q  16 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtca-ttttttgatctagaactagcc 114  Q
    ||||||| ||||||| |||||||||||||| |||| | ||||||| ||| |||||| |||||| |||||||||| | | |||||||| ||||||  | ||    
T  7515509 tttttagagagagaagctccaacttctctctaaacttgctttctctttcgttcatcgaggaggggtggttttagattatttttttgacctagaatcaccc 7515410  T
Q  115 ctctacatctttttccc--tcttctttcaatctaaacaagtggttttcacat 164  Q
    |||||||| || |||||  | ||||| ||||||||| |||||||||||||||    
T  7515409 ctctacattttgttcccctttttcttccaatctaaataagtggttttcacat 7515358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 34018348 - 34018501
Alignment:
Q  21 agtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctac 120  Q
    |||||||||| || ||| || | || |||| ||||||||||||| |||||| |||| |   |||||||||||||||||||| ||||||  | ||||||||    
T  34018348 agtgagagaagcttcaatttttgtctaaactttctttctccttcgttcatcgaggatggaaggttttaggtcattttttgacctagaatcacccctctac 34018447  T
Q  121 atcttttt--ccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    |||| |||  || | |||||||||| |||| |||||||||||||||| ||||||    
T  34018448 atctctttacccattttctttcaatttaaataagtggttttcacatatatcaag 34018501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 32328896 - 32328805
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 101  Q
    |||| |||| ||||||||||||||| |||||||||| | || ||||||||||||| |||||| |||||| ||||||||| |||| |||||||    
T  32328896 cctagttttctagtgagagaaactctaacttctctctatactttctttctccttcgttcatcgaggaggggtggttttaagtcagtttttga 32328805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 172
Target Start/End: Original strand, 1523185 - 1523346
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    ||||||||| ||||||||||||||| |  ||||||| ||   || |||||| ||||  ||| ||||||| ||| |||||||||| ||||||| ||||||     
T  1523185 cctaattttatagtgagagaaactctacattctctctaagttttatttctctttcacacatgaaggaggggtgattttaggtcaatttttgacctagaat 1523284  T
Q  110 tagccctctacatctttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
     | |||||| ||| |||||| || ||||||||||||||| ||||| ||| |||||| ||||||    
T  1523285 ca-ccctctgcatttttttctcttttctttcaatctaaataagtgatttccacatacatcaag 1523346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 30608780 - 30608663
Alignment:
Q  55 tttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatctttttc-cctcttctttcaatctaaacaagt 153  Q
    |||||||||||| ||| ||||| |  |||||||||||||||||| || ||||||  | |||||||||| |||||| ||| |||||||||||||||  |||    
T  30608780 tttctccttcatccattaaggatggatggttttaggtcattttt-gacctagaatcacccctctacatatttttctccttttctttcaatctaaattagt 30608682  T
Q  154 ggttttcacataaatcaag 172  Q
    |||||||||||| ||||||    
T  30608681 ggttttcacatatatcaag 30608663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 9723687 - 9723602
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatca-aggaggtgtggttttaggtcatttttt 99  Q
    |||| |||||| ||||||||||||||||||| |||| ||||||||| ||| ||||||| |||||| ||||||||||||| ||||||    
T  9723687 ttttctagtgaaagaaactccaacttctctctaaactttctttctcgttcgttcatcagaggaggggtggttttaggtcttttttt 9723602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 172
Target Start/End: Original strand, 127464 - 127611
Alignment:
Q  20 tagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctcta 119  Q
    ||||||||||||  |||||||||||| |||| || |||||| ||| |||||  |||||| ||||||||||||   ||||||||||| ||  | |||||||    
T  127464 tagtgagagaaatcccaacttctctctaaacgttttttctctttcgttcattgaggagg-gtggttttaggt--atttttgatctaaaatcacccctcta 127560  T
Q  120 catctttttccc-tcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    |||||||||||| | |||||||   ||||| |||||||||||||||| ||||||    
T  127561 catctttttcccattttctttc---ctaaataagtggttttcacatatatcaag 127611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 131
Target Start/End: Complemental strand, 32192003 - 32191924
Alignment:
Q  52 ttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatctttttccc 131  Q
    ||||||||| ||||||||||||||||| ||||||||||||| |||||||||||| ||  | || ||| ||||||||||||    
T  32192003 ttctttctctttcattcatcaaggaggggtggttttaggtccttttttgatctacaatcacccttctgcatctttttccc 32191924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 9721830 - 9721761
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatca 72  Q
    |||||| | ||||||| |||||||||||||||||||||||||| |||| ||||||||| ||| |||||||    
T  9721830 agccggccataattttctagtgagagaaactccaacttctctctaaactttctttctcgttcgttcatca 9721761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 172
Target Start/End: Complemental strand, 4010807 - 4010651
Alignment:
Q  16 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccc 115  Q
    |||||||||||||||||| || |||||||| ||   |||||||||||| ||| ||  |||||| |||  ||||| ||||||||||| ||||||  | |||    
T  4010807 tttttagtgagagaaacttcatcttctctctaagttttctttctcctttatttattgaggaggagtgactttagatcattttttgacctagaatcacccc 4010708  T
Q  116 tctacatctttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    |||   |||||||  |  |||||||||| |||| || |||||||||||  |||||||    
T  4010707 tctgtgtctttttttcatttctttcaatttaaataaatggttttcacactaatcaag 4010651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 9719693 - 9719643
Alignment:
Q  22 gtgagagaaactccaacttctctcaaaaccttctttctccttcattcatca 72  Q
    |||||||||||||||||||||||| |||| ||||||||| ||| |||||||    
T  9719693 gtgagagaaactccaacttctctctaaactttctttctcgttcgttcatca 9719643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 34222653 - 34222721
Alignment:
Q  90 gtcattttttgatctagaactagccctctacatctttttccctcttctttcaatctaaacaagtggttt 158  Q
    |||||||||| | ||||||  | |||||||||||||||||||  ||||||| ||||||| |||||||||    
T  34222653 gtcattttttaacctagaatcacccctctacatctttttcccctttctttcgatctaaataagtggttt 34222721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 27097918 - 27097834
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 99  Q
    ||||||||||||||||||| ||  ||||||| ||   ||||||||| |||| ||||  |||| | ||||||||||||| ||||||    
T  27097918 ttttttagtgagagaaacttcacattctctctaagttttctttctctttcactcattcaggaagagtggttttaggtcttttttt 27097834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 8e-45; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 10 - 162
Target Start/End: Original strand, 10232846 - 10233000
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||| ||||| |||||||||||||||||||| |||| ||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||     
T  10232846 cctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcaaggaggggtggttttaggtcattttttgacctagaat 10232945  T
Q  110 tagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcac 162  Q
     | ||||||||||||||||  |||| ||||||||||||||| |||||||||||||    
T  10232946 cacccctctacatcttttttccccttttctttcaatctaaataagtggttttcac 10233000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 10 - 164
Target Start/End: Complemental strand, 45568757 - 45568601
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||| |||||||||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||     
T  45568757 cctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgatctagaat 45568658  T
Q  110 tagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
     | || |||||||||||||  |||| ||||||||||||||| |||| ||||||||||    
T  45568657 aatccatctacatcttttttccccttttctttcaatctaaataagttgttttcacat 45568601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 10 - 162
Target Start/End: Original strand, 40487101 - 40487254
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    ||||||||| |||||||||||||||||||||||||| |||| ||||||||||||| |||||| |||||| ||| |||||||||||||||||| ||||||     
T  40487101 cctaattttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtgattttaggtcattttttgacctagaat 40487200  T
Q  110 tagccctctacatcttttt-ccctcttctttcaatctaaacaagtggttttcac 162  Q
     |  | ||||||||||||| |||| ||||||||||||||| |||||||||||||    
T  40487201 cactcttctacatctttttccccttttctttcaatctaaataagtggttttcac 40487254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 10 - 172
Target Start/End: Original strand, 47895927 - 47896091
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||| |||||||||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||| ||| ||||||||||| ||||||     
T  47895927 cctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttatagatcattttttgacctagaat 47896026  T
Q  110 tagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
     | ||||||||||||||||   | | ||||||||||||||| |||||||||||||||| ||||||    
T  47896027 cacccctctacatcttttttctctttttctttcaatctaaataagtggttttcacatatatcaag 47896091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 162
Target Start/End: Original strand, 9998242 - 9998397
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtca-ttttttgatctagaa 108  Q
    |||| |||| ||||| |||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||| |||||||| ||||||    
T  9998242 cctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcatttttttgacctagaa 9998341  T
Q  109 ctagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcac 162  Q
      | ||||||||||||||||  |||| ||||||||||||||| |||||||||||||    
T  9998342 tcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcac 9998397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 10 - 164
Target Start/End: Original strand, 21431401 - 21431556
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||| ||||| |||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||| ||||||| ||| ||     
T  21431401 cctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtca-tttttgacctaaaat 21431499  T
Q  110 tagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
     | ||||||||||||||||  || | ||||||||||||||| |||||||||||||||    
T  21431500 cacccctctacatcttttttcccattttctttcaatctaaataagtggttttcacat 21431556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 10 - 172
Target Start/End: Complemental strand, 35865246 - 35865083
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||| |||||||||||||| ||||||||||| |||| ||||||||||||| ||| || |||||| ||||||||||||||| |||||||||| ||     
T  35865246 cctagttttctagtgagagaaacttcaacttctctctaaactttctttctccttcgttcctcgaggaggggtggttttaggtcat-ttttgatctaaaat 35865148  T
Q  110 tagccctctacatctttttccctc--ttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
     | || ||||||||||||| ||||  ||||||||||||||| |||| ||||||||||| ||||||    
T  35865147 catccttctacatcttttttcctcttttctttcaatctaaataagtagttttcacatatatcaag 35865083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 6955016 - 6954853
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 102  Q
    |||||| |||| |||| |||||  ||||||||||||||||||| |||| ||||||||||||| ||||   |||||| ||| ||||||||||||||||||     
T  6955016 agccggccctagttttctagtggaagaaactccaacttctctctaaactttctttctccttcgttcactgaggaggggtgattttaggtcattttttgac 6954917  T
Q  103 ctagaactagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    ||||||  | ||||||||||||||||  |||| ||||||||||||||| |||||| ||||||||    
T  6954916 ctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtgggtttcacat 6954853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 162
Target Start/End: Original strand, 10108014 - 10108166
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||| ||||| |||||||||||||||||||| |||| ||||||||||||  |||||| |||||| ||||||||||||||  |||||| ||||||     
T  10108014 cctagttttctagtgggagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggtggttttaggtca--ttttgacctagaat 10108111  T
Q  110 tagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcac 162  Q
     | ||||||||||||||||  |||| ||||||||||||||| |||||||||||||    
T  10108112 cacccctctacatcttttttccccttttctttcaatctaaataagtggttttcac 10108166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 10 - 170
Target Start/End: Complemental strand, 47042365 - 47042203
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    ||||||||| |||||| ||||||||||||||||||| |||| || ||| |||||| |||||| |||||| |||||||||||||||||||| | ||| ||     
T  47042365 cctaattttctagtgaaagaaactccaacttctctctaaactttatttatccttcgttcatcgaggaggggtggttttaggtcattttttaacctataat 47042266  T
Q  110 tagccctctacatct--ttttccctcttctttcaatctaaacaagtggttttcacataaatca 170  Q
     | ||||||||||||  |||||||| |||||||||| |||| ||||| |||||||||| ||||    
T  47042265 cacccctctacatctttttttcccttttctttcaatttaaataagtgattttcacatatatca 47042203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 165
Target Start/End: Original strand, 33579649 - 33579800
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    |||| |||||||||||||| ||||||||||| |||| |||||| |||||| |||||| | || | ||||||||| |||||||||||| ||||||  | ||    
T  33579649 ttttctagtgagagaaacttcaacttctctctaaactttctttatccttcgttcatcgaagaagggtggttttaagtcattttttgacctagaatcaccc 33579748  T
Q  115 ctctacatc-tttttccctcttctttcaatctaaacaagtggttttcacata 165  Q
    ||||||||| ||||||| | ||||||||||||||| ||||| ||||||||||    
T  33579749 ctctacatcttttttccattttctttcaatctaaataagtgattttcacata 33579800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 164
Target Start/End: Complemental strand, 48651048 - 48650891
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||| |||||| ||||||||||||||||||| |||| |||||||||| || |||||| |||||| |||||||||||||||||||||| ||| ||     
T  48651048 cctagttttctagtgaaagaaactccaacttctctctaaactttctttctccatcgttcatcgaggaggggtggttttaggtcattttttgacctaaaat 48650949  T
Q  110 tagccctctacatcttttt---ccctcttctttcaatctaaacaagtggttttcacat 164  Q
     | ||||| ||||||||||   |||| ||||||||||||  | |||||||||||||||    
T  48650948 cacccctcgacatctttttttccccttttctttcaatctgtataagtggttttcacat 48650891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 164
Target Start/End: Complemental strand, 52923428 - 52923274
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| ||||||||||  ||||||||||||||||||| |||| ||||||||||||| |||||  |||||  || |||||| |||| ||||||| ||||||     
T  52923428 cctatttttttagtggaagaaactccaacttctctctaaactttctttctccttcgttcattgaggagaggtagttttaagtca-tttttgacctagaat 52923330  T
Q  110 tagccctctacatc-tttttccctcttctttcaatctaaacaagtggttttcacat 164  Q
     | ||||||||||| ||||||||| ||||||||||||||| |||||||||||||||    
T  52923329 cacccctctacatcttttttcccttttctttcaatctaaataagtggttttcacat 52923274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 10 - 162
Target Start/End: Original strand, 10229250 - 10229406
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt--gatctaga 107  Q
    |||| |||| ||||| |||||||||||| ||||||| |||| ||||||||||||| |||||| |||||| ||||||||||||| ||||||  || |||||    
T  10229250 cctagttttctagtgggagaaactccaatttctctctaaactttctttctccttctttcatcgaggaggggtggttttaggtcttttttttggacctaga 10229349  T
Q  108 actagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcac 162  Q
    |  | | ||||||||||||||  |||| ||||||||||||||| |||||||||||||    
T  10229350 atcaccactctacatcttttttccccttttctttcaatctaaataagtggttttcac 10229406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 164
Target Start/End: Complemental strand, 12050953 - 12050804
Alignment:
Q  18 tttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctc 117  Q
    ||||| |||||||||||||||||||||| |||  ||||||||||||| ||||||||||| ||||||||||| || |||||||||| |||||  | |||||    
T  12050953 tttagagagagaaactccaacttctctctaaattttctttctccttcgttcatcaaggatgtgtggttttaagttattttttgatttagaatcacccctc 12050854  T
Q  118 tacatctt-tttccc--tcttctttcaatctaaacaagtggttttcacat 164  Q
    |||||||| ||||||  | |||||| |||||| | |||||||||||||||    
T  12050853 tacatcttctttcccctttttctttaaatctagataagtggttttcacat 12050804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 40556480 - 40556640
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 102  Q
    |||||| |||| |||| ||||| ||||||||||||||||| || |||| ||||||||| ||| |||||| |||||| ||||||||||||||||||||||     
T  40556480 agccggccctagttttctagtgggagaaactccaacttctttctaaactttctttctcattcgttcatcgaggaggggtggttttaggtcattttttgac 40556579  T
Q  103 ctagaactagccctctacatc--tttttccctcttctttcaatctaaacaagtggttttca 161  Q
    ||||||  | ||||| |||||  ||||||||| ||||||  || |||| ||||||||||||    
T  40556580 ctagaatcacccctccacatctttttttcccttttcttttgatataaataagtggttttca 40556640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 160
Target Start/End: Complemental strand, 7449217 - 7449063
Alignment:
Q  7 ggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctag 106  Q
    ||||||| |||| || ||||||||||||||||||||||| |||| || |||||| ||| ||||| |||||||  |||||||||||||||||||||  |||    
T  7449217 ggtcctagttttctaatgagagaaactccaacttctctc-aaactttttttctctttcgttcattaaggagggctggttttaggtcattttttgacatag 7449119  T
Q  107 aactagccctctacatctttttccctc--ttctttcaatctaaacaagtggttttc 160  Q
    ||    |||||||||||||||| ||||  ||||||||||||||| |||||||||||    
T  7449118 aatcgtccctctacatcttttttcctcttttctttcaatctaaataagtggttttc 7449063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 160
Target Start/End: Complemental strand, 7457359 - 7457205
Alignment:
Q  7 ggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctag 106  Q
    ||||||| |||| || ||||||||||||||||||||||| |||| || |||||| ||| ||||| |||||||  |||||||||||||||||||||  |||    
T  7457359 ggtcctagttttctaatgagagaaactccaacttctctc-aaactttttttctctttcgttcattaaggagggctggttttaggtcattttttgacatag 7457261  T
Q  107 aactagccctctacatctttttccctc--ttctttcaatctaaacaagtggttttc 160  Q
    ||    |||||||||||||||| ||||  ||||||||||||||| |||||||||||    
T  7457260 aatcgtccctctacatcttttttcctcttttctttcaatctaaataagtggttttc 7457205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 155
Target Start/End: Original strand, 32701269 - 32701421
Alignment:
Q  5 ccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatct 104  Q
    |||| |||| |||| |||||  ||||||||||||||||||  |||| ||||||||||||| |||||| ||| || |||||||||||||||||||||| ||    
T  32701269 ccggccctagttttctagtggaagaaactccaacttctctttaaactttctttctccttcgttcatcgaggtggggtggttttaggtcattttttgacct 32701368  T
Q  105 agaactagccctctacatcttt-ttc-cctcttctttcaatctaaacaagtgg 155  Q
    ||||  | |||||||||||||| ||| ||| ||||||||||||||| ||||||    
T  32701369 agaatcatccctctacatctttcttctccttttctttcaatctaaataagtgg 32701421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 36461751 - 36461588
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 102  Q
    |||||| |||| |||| ||||| |||||||| ||  ||||||| |||| ||||||||||||| |||||| |||| | ||||||||||||||||||||||     
T  36461751 agccggccctagttttctagtgtgagaaacttcatattctctctaaactttctttctccttcgttcatcgaggatgagtggttttaggtcattttttgac 36461652  T
Q  103 ctagaactagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    ||| |   | ||||||||||||||||  |||| ||||||||||||||| ||||| |||||||||    
T  36461651 ctatattcacccctctacatcttttttccccttttctttcaatctaaataagtgattttcacat 36461588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 9797830 - 9797686
Alignment:
Q  20 tagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctcta 119  Q
    |||||||||||||||||||||||||| |||| || |||||||||| |||||    |||  |||||||||||||||||||||| ||||||  | |||||||    
T  9797830 tagtgagagaaactccaacttctctctaaactttatttctccttcgttcat---tgagaggtggttttaggtcattttttgacctagaatcacccctcta 9797734  T
Q  120 catc---tttttccctcttctttcaatctaaacaagtggttttcacat 164  Q
    ||||   |||||| || ||||||||||||||| |||||||||||||||    
T  9797733 catcttttttttctcttttctttcaatctaaataagtggttttcacat 9797686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 164
Target Start/End: Original strand, 54148793 - 54148920
Alignment:
Q  39 ttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatctttttccctc--ttc 136  Q
    ||||||| |||| ||||||||||||| |  ||| |||||| |||||||||||||||||||||| ||| ||  | |||||||||||||||| ||||  |||    
T  54148793 ttctctctaaactttctttctccttcgtcaatcgaggaggggtggttttaggtcattttttgacctacaatcacccctctacatcttttttcctcttttc 54148892  T
Q  137 tttcaatctaaacaagtggttttcacat 164  Q
    |||||||||||| |||||||||||||||    
T  54148893 tttcaatctaaataagtggttttcacat 54148920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 21534116 - 21533966
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    |||||||||||||||||||| || ||||||| |||| ||||||||||||| || ||| |||| | |||||||||||||  ||||||| ||||||  | ||    
T  21534116 ttttttagtgagagaaactctaatttctctctaaactttctttctccttcgttaatcgaggatgggtggttttaggtc--tttttgacctagaatcaccc 21534019  T
Q  115 ctctacatcttttt---ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    ||||||||||||||   | || ||||| ||||||||| |||||||||||||||    
T  21534018 ctctacatctttttttcctcttttcttccaatctaaataagtggttttcacat 21533966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 43488917 - 43488747
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatc--------aaggaggtgtggttttaggtcat 94  Q
    |||||| |||| ||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||         ||| || |||| |||||||| |    
T  43488917 agccggccctagttttttagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgggggggggagggggggtgggtttaggtc-t 43488819  T
Q  95 tttttgatctagaactagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    ||||||| ||||||  | ||||||||||||||||  || | ||||||||||||||| |||||||||||||||    
T  43488818 tttttgacctagaatcacccctctacatcttttttccctttttctttcaatctaaataagtggttttcacat 43488747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 164
Target Start/End: Complemental strand, 31272120 - 31271964
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaagga-ggtgtggttttaggtcattttttgatctagaa 108  Q
    ||||||||| |||||||||||||||||||||||||| ||   |||||| |||||| |||||| |||| |||||| |||||||| ||||||| | ||||||    
T  31272120 cctaattttctagtgagagaaactccaacttctctctaagttttctttttccttcgttcatcgaggagggtgtgattttaggttattttttaacctagaa 31272021  T
Q  109 ctagccctctacatctttt-tccctcttctttcaatctaaacaagtggttttcacat 164  Q
      | |||| |||||||||| ||||  |||| |||||||||| || ||||||||||||    
T  31272020 tcatccctttacatcttttgtcccctttctatcaatctaaataaatggttttcacat 31271964  T

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Target: chr3; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 108
Target Start/End: Original strand, 38545616 - 38545709
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 108  Q
    |||| |||||||||||||| ||||||||||| |||| ||||||||||||| |||||  |||||  |||||||||||||||||||||| ||||||    
T  38545616 ttttctagtgagagaaacttcaacttctctctaaactttctttctccttcgttcattgaggagtggtggttttaggtcattttttgacctagaa 38545709  T

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Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 50194605 - 50194433
Alignment:
Q  1 tgagccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttg 100  Q
    |||||||  |||| ||||||||||||||||||||||||||||||| ||   ||| ||||| |||| || || || ||| |||||||||| ||||||||||    
T  50194605 tgagccgaccctagttttttagtgagagaaactccaacttctctctaagttttcgttctctttcactcgtcgagaaggagtggttttagatcattttttg 50194506  T
Q  101 atctagaactagccctctacat-ctttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    | ||| ||  | | |||| ||| ||||||||||  |||||||||||||| ||||| ||| |||||| ||||||    
T  50194505 acctaaaatcacctctctgcatcctttttcccttctctttcaatctaaataagtgatttccacatatatcaag 50194433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 171
Target Start/End: Original strand, 7546397 - 7546550
Alignment:
Q  21 agtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctac 120  Q
    ||||||||||| || | |||||||| ||   |||||||||  ||| ||||| |||||| ||| |||||||||| ||||||||||||||  | |||||| |    
T  7546397 agtgagagaaattcaatcttctctctaagttttctttctctctcactcatcgaggaggggtgattttaggtcaatttttgatctagaatcacccctctgc 7546496  T
Q  121 atc---tttttccctcttctttcaatctaaacaagtggttttcacataaatcaa 171  Q
    |||   |||||||| |||||||||||||||| ||||| |||||||||| |||||    
T  7546497 atcttttttttcccccttctttcaatctaaataagtgattttcacatacatcaa 7546550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 172
Target Start/End: Complemental strand, 21290132 - 21289970
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||||||||||||||||||||||||   |||||||| ||   ||||| ||| |||| ||||  |||||  ||| |||||||||| ||||||| ||||||     
T  21290132 cctaattttttagtgagagaaactctgtcttctctctaagttttcttcctctttcactcatggaggagaggtgattttaggtcaatttttgacctagaat 21290033  T
Q  110 tagccctctacatctttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
     | |||||| ||||||||| || |||||||||||| ||| ||||| |||| ||||| ||||||    
T  21290032 cacccctctgcatcttttttccccttctttcaatccaaataagtgattttaacatacatcaag 21289970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 172
Target Start/End: Complemental strand, 23800230 - 23800058
Alignment:
Q  5 ccggtcctaattttttagtgagagaaactccaactt-ctctcaaaaccttctttctccttcattcatcaaggaggtg--tggttttaggtcattttttga 101  Q
    |||| |||| |||| |||||||||||||| ||| || ||||| |||  || ||||||||||||||||| | |||| |  ||||||||||| |||||||||    
T  23800230 ccggccctagttttctagtgagagaaacttcaaatttctctctaaattttttttctccttcattcatcgaagaggggggtggttttaggttattttttga 23800131  T
Q  102 tctagaactagccctctacatctttttccctctt--ctttcaatctaaacaagtggttttcacataaatcaag 172  Q
     ||| || ||  | ||||||||||||| ||||||  ||||||||||||| |||||||||| ||||| ||||||    
T  23800130 cctaaaattactcttctacatcttttttcctcttttctttcaatctaaataagtggtttttacatatatcaag 23800058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 164
Target Start/End: Complemental strand, 26276094 - 26275951
Alignment:
Q  22 gtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctaca 121  Q
    ||||||||||||| || ||||||  |||| |||||||||||| ||||||  |||||  |||||||||||| ||||||||| ||| ||  | ||||| |||    
T  26276094 gtgagagaaactctaatttctctgtaaactttctttctcctttattcattgaggagaggtggttttaggtaattttttgacctaaaatcaaccctcgaca 26275995  T
Q  122 tctttttccc-tcttctttcaatctaaacaagtggttttcacat 164  Q
    | |||| ||| | |||||||||| |||| |||||||||||||||    
T  26275994 ttttttacccattttctttcaatttaaataagtggttttcacat 26275951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 629214 - 629055
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    |||||||||||||||||||| |||||||||| ||   ||| ||| | |||| ||||| |||||| |||||||||||||||| ||||| ||| ||  | ||    
T  629214 ttttttagtgagagaaactctaacttctctctaagttttccttccctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaatcatcc 629115  T
Q  115 ctctacatc--tttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
     ||| ||||  ||||| || |||||||| ||||||| ||||| |||||||| | ||||||    
T  629114 ttctgcatcttttttttccccttctttcgatctaaataagtgattttcacaaatatcaag 629055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 172
Target Start/End: Complemental strand, 20465238 - 20465119
Alignment:
Q  52 ttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatctttttccctcttctttcaatctaaacaa 151  Q
    ||||||||||||||||||||||| ||| ||||||||| |||| |||||||  |||||  | |||||| | ||||||||||  || ||||||| |||| ||    
T  20465238 ttctttctccttcattcatcaagtaggggtggttttatgtca-tttttgacatagaatcacccctctccctctttttcccctttttttcaatataaataa 20465140  T
Q  152 gtggttttcacataaatcaag 172  Q
    ||| |||| ||||| ||||||    
T  20465139 gtgattttaacatatatcaag 20465119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 172
Target Start/End: Original strand, 29921820 - 29921992
Alignment:
Q  3 agccggtcctaatttttt-agtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggtttt-aggtcattttttg 100  Q
    ||||||||||| |||||| ||| ||||| |||| | |||||||| ||   ||||||||| ||||||| || |||||| |||||||| |||||||||||||    
T  29921820 agccggtcctagtttttttagtaagagatactctaccttctctctaagttttctttctctttcattcgtcgaggaggggtggtttttaggtcattttttg 29921919  T
Q  101 atctagaactagccctctacatc-tttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    | ||| ||  |   |||| |||| ||||||||  ||||||||||||||| ||||| ||| |||||| ||||||    
T  29921920 agctaaaatcacttctctccatcttttttcccctttctttcaatctaaataagtgatttccacatatatcaag 29921992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 172
Target Start/End: Original strand, 29970973 - 29971145
Alignment:
Q  3 agccggtcctaatttttt-agtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggtttt-aggtcattttttg 100  Q
    ||||||||||| |||||| ||| ||||| |||| | |||||||| ||   ||||||||| ||||||| || |||||| |||||||| |||||||||||||    
T  29970973 agccggtcctagtttttttagtaagagatactctaccttctctctaagttttctttctctttcattcgtcgaggaggggtggtttttaggtcattttttg 29971072  T
Q  101 atctagaactagccctctacatc-tttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    | ||| ||  |   |||| |||| ||||||||  ||||||||||||||| ||||| ||| |||||| ||||||    
T  29971073 agctaaaatcacttctctccatcttttttcccctttctttcaatctaaataagtgatttccacatatatcaag 29971145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 43016631 - 43016714
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtca 93  Q
    |||| |||| ||||||||||||||| |||||||||| |||  ||||||||| ||| |||||| |||| | ||||||||||||||    
T  43016631 cctagttttctagtgagagaaactctaacttctctctaaattttctttctctttcgttcatcgaggaagggtggttttaggtca 43016714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 953715 - 953631
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 99  Q
    |||| |||||||||||||||||  ||||||| ||   |||||||||||||||||||  |||||  ||||||||||||| ||||||    
T  953715 ttttatagtgagagaaactccacattctctctaagttttctttctccttcattcattgaggagaagtggttttaggtcttttttt 953631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 20988075 - 20988028
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaac 50  Q
    |||||| |||| ||||||||||||||||||||||||||||||| ||||    
T  20988075 agccggccctagttttttagtgagagaaactccaacttctctctaaac 20988028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 165
Target Start/End: Original strand, 37040575 - 37040704
Alignment:
Q  27 agaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatcttt 126  Q
    |||||||| ||||||| || |||| ||||||||| ||| ||||||||||||| ||||||||           ||| ||||||  | ||||||||||||||    
T  37040575 agaaactcaaacttctttctaaactttctttctctttcgttcatcaaggaggggtggtttt-----------tgacctagaatcacccctctacatcttt 37040663  T
Q  127 ttccc--tcttctttcaatctaaacaagtggttttcacata 165  Q
    || ||  | ||||||||||||||| ||||||||||||||||    
T  37040664 tttcccattttctttcaatctaaataagtggttttcacata 37040704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 9688541 - 9688488
Alignment:
Q  16 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattca 69  Q
    |||||||||||||||||| ||||||||||| |||  |||||||| |||||||||    
T  9688541 tttttagtgagagaaacttcaacttctctctaaattttctttcttcttcattca 9688488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 172
Target Start/End: Complemental strand, 20609168 - 20609039
Alignment:
Q  52 ttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatct---------ttttccctcttctttcaa 142  Q
    ||||||||||||||||| || |||||| ||| ||||| || ||||||||| ||| ||  | ||||||||||||         ||||| || |||||||||    
T  20609168 ttctttctccttcattcgtcgaggaggggtgattttaagttattttttgacctaaaatcaaccctctacatcttttttttttttttctcttttctttcaa 20609069  T
Q  143 tctaaacaagtggttttcacataaatcaag 172  Q
    |||||| |||||||||| ||||| ||||||    
T  20609068 tctaaataagtggttttaacatatatcaag 20609039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 36910850 - 36910798
Alignment:
Q  114 cctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    |||||||||||||||  |||| ||||||||||||||| |||||||||||||||    
T  36910850 cctctacatcttttttccccttttctttcaatctaaataagtggttttcacat 36910798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 1803281 - 1803246
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctc 45  Q
    |||||||||||||||| |||||||||||||||||||    
T  1803281 cctaattttttagtgaaagaaactccaacttctctc 1803246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 172
Target Start/End: Complemental strand, 51303951 - 51303789
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||||||||||| ||||||||||||   |||||||| ||   ||||| ||| || | ||||| ||||||  || ||||| |||| ||||||| ||||||     
T  51303951 cctaattttttaatgagagaaactctgtcttctctctaagttttcttcctcttttactcatcgaggagggatgattttatgtcaatttttgacctagaa- 51303853  T
Q  110 tagccctctacatc-tttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    |  |||||| |||| ||||||||  || |||||||| ||| ||||| |||||||||| ||||||    
T  51303852 tcaccctctgcatcttttttcccctttttttcaatccaaataagtgattttcacatacatcaag 51303789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 172
Target Start/End: Original strand, 1649321 - 1649359
Alignment:
Q  134 ttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    ||||||||||||||| |||||||||||||||| ||||||    
T  1649321 ttctttcaatctaaataagtggttttcacatatatcaag 1649359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 165
Target Start/End: Complemental strand, 25631735 - 25631646
Alignment:
Q  75 gaggtgtggttttaggtcattttttgatctagaactagccctctacatctttttccctcttctttcaatctaaacaagtggttttcacata 165  Q
    |||| |||||||| ||||| ||||||| ||| ||  | |||||| |||||||||| ||||  |||||||||||| ||||| ||||||||||    
T  25631735 gaggggtggttttgggtcaatttttgacctaaaatcatccctctccatctttttctctcta-tttcaatctaaataagtgattttcacata 25631646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 29249024 - 29249182
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttt-taggtcattttttgatctagaactagc 113  Q
    |||||||||||||||||||| |||||||||  ||   |||||||||||||| ||||| || ||   || |||  |||||| ||||||| ||||||  |      
T  29249024 ttttttagtgagagaaactctaacttctctttaatttttctttctccttcactcatcgagaagtgatgatttgaaggtcactttttgacctagaatcact 29249123  T
Q  114 cctctacatctttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
     |||| |||||||||||   ||| ||| ||||||| ||||| |||||||||| ||||||    
T  29249124 tctcttcatctttttcctctttcgttcgatctaaataagtgtttttcacatatatcaag 29249182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 45
Target Start/End: Complemental strand, 53808170 - 53808140
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctc 45  Q
    |||||||||||||||||||||||||||||||    
T  53808170 ttttttagtgagagaaactccaacttctctc 53808140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 4821625 - 4821674
Alignment:
Q  52 ttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 101  Q
    ||||||||| ||||||| || || ||| ||||||||||||||||||||||    
T  4821625 ttctttctctttcattcgtcgagaaggggtggttttaggtcattttttga 4821674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 36910975 - 36910934
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctct 44  Q
    |||||| |||| |||| |||||||||||||||||||||||||    
T  36910975 agccggccctagttttctagtgagagaaactccaacttctct 36910934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 108
Target Start/End: Original strand, 29239184 - 29239212
Alignment:
Q  80 gtggttttaggtcattttttgatctagaa 108  Q
    |||||||||||||||||||||||||||||    
T  29239184 gtggttttaggtcattttttgatctagaa 29239212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 44907569 - 44907518
Alignment:
Q  113 ccctctacatctttttccctcttctttcaatctaaacaagtggttttcacata 165  Q
    |||||| |||||||||| || || |||||||||||||||||| ||||||||||    
T  44907569 ccctcttcatctttttctct-ttatttcaatctaaacaagtgattttcacata 44907518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 46220459 - 46220543
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaagga-ggtgtggttttaggtcattttt 98  Q
    |||| |||||| |||||||  |||||||||| |||| ||||||||| || ||| ||  |||| || |||||||||||||||||||    
T  46220459 ttttctagtgatagaaactataacttctctctaaactttctttctcttttatttattgaggaaggggtggttttaggtcattttt 46220543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 3e-44; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 26633990 - 26633828
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 102  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||| |||| |||||  |||||| ||||| ||||||||||||||||     
T  26633990 agccggtcctagttttttagtgagagaaactccaacttctctctaaactttctttcttcttcgttcattgaggaggggtggtcttaggtcattttttgac 26633891  T
Q  103 ctagaactagccctctacatctttttcc-ctcttctttcaatctaaacaagtggttttcacat 164  Q
    ||||||  | |||| ||||||||||||| || ||||||||||||||| |||||||||||||||    
T  26633890 ctagaatcacccctatacatctttttcctcttttctttcaatctaaataagtggttttcacat 26633828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 2520578 - 2520729
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    |||| |||||||||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||||||||||| ||||||  | ||    
T  2520578 ttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcaccc 2520677  T
Q  115 ctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    ||||||||||||||  |||| ||| ||||||||||| |||||||||||||||    
T  2520678 ctctacatcttttttccccttttcgttcaatctaaataagtggttttcacat 2520729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 26091222 - 26091063
Alignment:
Q  14 attttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagc 113  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| | ||| |||||||| ||||||||| ||||||  | |    
T  26091222 attttttagtgagagaaactccaacttctctctaaaccttctttctccttcattcatcgaggatgagtgattttaggttattttttgacctagaatcacc 26091123  T
Q  114 cctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    |||||| ||||||||   ||| || |||||||||||| |||||||||||||||||||||||    
T  26091122 cctcta-atcttttttctccttttatttcaatctaaataagtggttttcacataaatcaag 26091063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 2 - 164
Target Start/End: Original strand, 22610972 - 22611135
Alignment:
Q  2 gagccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 101  Q
    ||||||| |||| |||||||||| |||||||||||||||||||| |||| ||||||||||||| ||| || |||||| |||||||||||||| |||||||    
T  22610972 gagccggccctagttttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcgtcgaggaggggtggttttaggtca-tttttga 22611070  T
Q  102 tctagaactagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
     ||||||  | || |||||||||||||  |||| ||||||||||||||| |||||||||||||||    
T  22611071 cctagaatcacccatctacatcttttttccccttttctttcaatctaaataagtggttttcacat 22611135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 164
Target Start/End: Complemental strand, 4143067 - 4142912
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||||||||| |||||||||||||||||||  |||| ||||||||||||  |||||| |||||| |||||||||||||||||||||| ||||||     
T  4143067 cctagttttttagtgggagaaactccaacttctctataaactttctttctcctttgttcatcgaggaggggtggttttaggtcattttttgacctagaat 4142968  T
Q  110 tagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
     | ||||||||||||||||  |||| ||||||||||||||| |||| ||||||||||    
T  4142967 cacccctctacatcttttttccccttttctttcaatctaaataagt-gttttcacat 4142912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 164
Target Start/End: Complemental strand, 19853824 - 19853669
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||| ||||| |||||||||||||||||||| |||| ||||||| |||||||||||| |||||| ||||||||||||||| |||||| ||||||     
T  19853824 cctagttttctagtgggagaaactccaacttctctctaaactttctttccccttcattcatcgaggaggggtggttttaggtcat-ttttgacctagaat 19853726  T
Q  110 tagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
     | ||||||||||||||||  |||| ||||| ||||||||| |||||||||||||||    
T  19853725 cacccctctacatcttttttccccttttcttccaatctaaataagtggttttcacat 19853669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 172
Target Start/End: Original strand, 5119134 - 5119299
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtca-ttttttgatctagaa 108  Q
    |||| |||| |||||||| ||| | |||||||| || |||| || |||||||||||||||||||||||| ||||||||| |||| |||||| | ||||||    
T  5119134 cctagttttctagtgagataaatttcaacttctttctaaactttatttctccttcattcatcaaggaggggtggttttatgtcattttttttacctagaa 5119233  T
Q  109 ctagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
      | ||||||||||||||||  |||||||||||||||||||| |||||||||||||||| ||||||    
T  5119234 tcacccctctacatctttttccccctcttctttcaatctaaataagtggttttcacatatatcaag 5119299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 15 - 165
Target Start/End: Original strand, 54021662 - 54021814
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    ||||||||||||||||||| ||| ||||||| |||| |||||||| ||||||||||| |||  | ||||||||||||||||||||||  || ||  | ||    
T  54021662 ttttttagtgagagaaacttcaatttctctctaaactttctttcttcttcattcatcgagggagagtggttttaggtcattttttgacataaaatcatcc 54021761  T
Q  115 ctctacatctttttccctc--ttctttcaatctaaacaagtggttttcacata 165  Q
    |||||||||||||| ||||  ||||||||||||||| ||||||||||||||||    
T  54021762 ctctacatcttttttcctcttttctttcaatctaaataagtggttttcacata 54021814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 165
Target Start/End: Original strand, 9178165 - 9178310
Alignment:
Q  22 gtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctaca 121  Q
    |||||||||||| ||  ||||||| |||  ||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||  | || ||||||    
T  9178165 gtgagagaaacttcagtttctctctaaaatttctttctccttcattcatcaaggaggggtggtcttaggtcattttttgacctagaatcacccttctaca 9178264  T
Q  122 tctttt--tccctcttctttcaatctaaacaagtggttttcacata 165  Q
    ||||||  ||||| ||||||||||||||| || |||||||||||||    
T  9178265 tctttttctcccttttctttcaatctaaataaatggttttcacata 9178310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 22558772 - 22558621
Alignment:
Q  16 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccc 115  Q
    ||||||| |||||||||||||| ||||||| |||| ||||||||||||| |||||  |||||| ||||||||||||||||||||||  |||||  | | |    
T  22558772 tttttagagagagaaactccaatttctctctaaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacatagaatcacctc 22558673  T
Q  116 tctacatcttttt---ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    |||||||||||||   || | ||||||||||||||| |||||||||||||||    
T  22558672 tctacatcttttttcccctttttctttcaatctaaataagtggttttcacat 22558621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 164
Target Start/End: Original strand, 53810824 - 53810980
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||| ||||| ||||||||||| |||||||| |||| ||||| ||||||| |||||| |||||| |||||||||||||||||||||| ||| ||     
T  53810824 cctagttttctagtgggagaaactccagcttctctctaaactttcttcctccttcgttcatcgaggaggggtggttttaggtcattttttgacctataat 53810923  T
Q  110 tagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
     | ||||||||||||||||  |||| |||||||||| |||| ||||| |||||||||    
T  53810924 cacccctctacatctttttcccccttttctttcaatttaaataagtgattttcacat 53810980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 21686560 - 21686398
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 102  Q
    ||||| ||||| |||| ||||||||||||||  |||||||||| |||| ||||||||||||  |||||| |||||| ||||||| ||||| ||||||||     
T  21686560 agccgatcctagttttctagtgagagaaactttaacttctctctaaactttctttctcctttgttcatcgaggaggggtggtttgaggtc-ttttttgac 21686462  T
Q  103 ctagaactagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    ||| ||  | ||||||||||||||||  |||| ||||||||||||||| |||||||||||||||    
T  21686461 ctaaaatcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcacat 21686398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 165
Target Start/End: Complemental strand, 9165344 - 9165198
Alignment:
Q  22 gtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcat-tttttgatctagaactagccctctac 120  Q
    |||||||||||||||||||||||| |||| |||||| ||| ||||||||| |||||  ||||||||||||||| ||||| | ||||||  | ||||||||    
T  9165344 gtgagagaaactccaacttctctctaaactttctttttccatcattcatcgaggagaggtggttttaggtcatattttttacctagaatcacccctctac 9165245  T
Q  121 atctttt--tccctcttctttcaatctaaacaagtggttttcacata 165  Q
    |||||||  |||||  |||||||||||||| ||||||||||||||||    
T  9165244 atctttttctcccttatctttcaatctaaataagtggttttcacata 9165198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 10496143 - 10496292
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    |||| ||||||||||||||||||||||| || |||| ||||| ||||||| |||||| ||||||||||||||||||||| ||||||| |||||| |  ||    
T  10496143 ttttctagtgagagaaactccaacttctttctaaactttcttactccttcgttcatcgaggaggtgtggttttaggtcaatttttgacctagaa-tcacc 10496241  T
Q  115 ctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcaca 163  Q
    || |||||||||||  || | |||||| |||||||| ||||||||||||||    
T  10496242 ctatacatcttttttcccattttcttttaatctaaataagtggttttcaca 10496292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 172
Target Start/End: Original strand, 35348102 - 35348265
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||| |||||| ||||||||||||||||||  |||| || ||||||||||  |||||  ||||| ||| |||||||||||||||||| ||||||     
T  35348102 cctagttttctagtgaaagaaactccaacttctctttaaactttttttctccttcgctcatcgtggaggggtgattttaggtcattttttgacctagaat 35348201  T
Q  110 tagccctctacatc-tttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
     | | ||||||||| ||||||||| ||||||||||||||| |||||||||||||| | ||||||    
T  35348202 cacctctctacatcttttttcccttttctttcaatctaaataagtggttttcacaaatatcaag 35348265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 164
Target Start/End: Original strand, 13633910 - 13634067
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||| |||||||||||||||||||||||||| |||| |||||||||||||  ||||| |||||  |||||||||||||| |||||||  |||||     
T  13633910 cctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgctcatcgaggagtggtggttttaggtca-tttttgacatagaat 13634008  T
Q  110 tagccctctacatctttt----tccctcttctttcaatctaaacaagtggttttcacat 164  Q
     | |||||||||||||||     |||| ||||||||||||||| |||||||||||||||    
T  13634009 cacccctctacatcttttccccccccttttctttcaatctaaataagtggttttcacat 13634067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 164
Target Start/End: Original strand, 43510010 - 43510151
Alignment:
Q  25 agagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatc- 123  Q
    ||||||||| ||||||||||  |||| ||| ||||||||| |||||| | || | |||||||||||||||||||||| ||||||  |  ||||||||||     
T  43510010 agagaaacttcaacttctctttaaactttcattctccttcgttcatcgaagaagggtggttttaggtcattttttgacctagaatcactcctctacatct 43510109  T
Q  124 -tttttccctcttctttcaatctaaacaagtggttttcacat 164  Q
     ||||||||| ||||||||||||||| |||||| ||||||||    
T  43510110 ttttttcccttttctttcaatctaaataagtggctttcacat 43510151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 172
Target Start/End: Original strand, 22300636 - 22300804
Alignment:
Q  5 ccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatct 104  Q
    |||| |||| |||||||| |||||||||||||||||||||| |||  || |||||| |||| || || |||||| |||||||||||||||||||||| ||    
T  22300636 ccggccctagttttttagagagagaaactccaacttctctctaaattttatttctctttcactcgtcgaggaggagtggttttaggtcattttttgacct 22300735  T
Q  105 agaactagccctctacat-ctttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    | ||  | |||| | ||| ||||||| || |||||||||| |||| ||||| ||||||| || ||||||    
T  22300736 aaaatcacccctttgcatcctttttctcttttctttcaatttaaataagtgattttcacgtatatcaag 22300804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 164
Target Start/End: Complemental strand, 24099384 - 24099227
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatt-ttttgatctagaa 108  Q
    |||| |||| |||||| |||||||  || ||||||| |||| |||||||| || | |||||| |||||  |||||||||||||||| |||||| ||||||    
T  24099384 cctagttttctagtgaaagaaactttaaattctctctaaactttctttcttctacgttcatcgaggagaggtggttttaggtcatttttttgacctagaa 24099285  T
Q  109 ctagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
      | ||||||||||||||||  |||| ||||||||||||||| ||||| |||||||||    
T  24099284 tcatccctctacatcttttttccccttttctttcaatctaaataagtgattttcacat 24099227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 56156870 - 56156782
Alignment:
Q  6 cggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcat 94  Q
    |||||||| ||||||| ||||||||||||||||||||||| |||| ||||||||  ||| ||||||||||| | |||||||||||||||    
T  56156870 cggtcctagttttttattgagagaaactccaacttctctctaaactttctttcttattcgttcatcaaggatgggtggttttaggtcat 56156782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 164
Target Start/End: Original strand, 32766309 - 32766466
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctc-aaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 108  Q
    |||| |||| |||||  |||||||||||||||| || ||||  || |||||||||| |||||  ||  || |||||||||||||||||||||| ||||||    
T  32766309 cctagttttctagtggaagaaactccaacttctttctaaaaaattttttctccttcgttcattgagagggggtggttttaggtcattttttgacctagaa 32766408  T
Q  109 ctagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
      | ||||||||||||||||  |||| ||||||||||||||  ||||| |||||||||    
T  32766409 tcacccctctacatcttttttccccttttctttcaatctaagtaagtgtttttcacat 32766466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 4 - 172
Target Start/End: Original strand, 45418319 - 45418486
Alignment:
Q  4 gccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatc 103  Q
    ||||| |||| |||| ||| |||| ||||| ||||||||||| |||  || |||||||| |||||||| |||||   ||||||||||||||||||||| |    
T  45418319 gccggccctagttttctagcgagaaaaacttcaacttctctctaaaaattttttctcctccattcatcgaggag---tggttttaggtcattttttgacc 45418415  T
Q  104 tagaactagccctctaca--tctttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    |||||  | |||||||||  |||||| | || |||| ||||| |||| ||| |||||||||||| ||||||    
T  45418416 tagaatcatccctctacacctcttttcctcttttctctcaatataaataagaggttttcacatatatcaag 45418486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 172
Target Start/End: Original strand, 27651744 - 27651907
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||||||||||||||||||||| ||   |||||||| |||  ||||| ||| |||| ||||| |||||| ||| | |||||||| ||||||| |||| |     
T  27651744 cctaattttttagtgagagaaattctgtcttctctctaaattttcttcctctttcactcatcgaggaggggtgatgttaggtcaatttttgacctaggat 27651843  T
Q  110 tagccctctacatc-tttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
     | || ||| |||| ||||||||  ||||||||||||||| ||||| |||||||||| ||||||    
T  27651844 cacccatctgcatcttttttcccatttctttcaatctaaataagtgattttcacatacatcaag 27651907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 125
Target Start/End: Complemental strand, 48257762 - 48257647
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||| |||||||| ||||||||||||||||  |||| ||||||||| ||| | |||| |||||| ||||||||| |||||||||||| ||||||     
T  48257762 cctagttttctagtgagaaaaactccaacttctctttaaactttctttctcattcgtacatcgaggaggggtggttttatgtcattttttgacctagaat 48257663  T
Q  110 tagccctctacatctt 125  Q
     | || ||||||||||    
T  48257662 cacccatctacatctt 48257647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 172
Target Start/End: Complemental strand, 51888529 - 51888366
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| ||||||| ||||||||||| |||||| |||| |    ||||||||| |||| ||||| |||||| ||||||||||||||||||||||  | |||     
T  51888529 cctagttttttattgagagaaacttcaacttttctctacgttttctttctctttcactcatcgaggaggggtggttttaggtcattttttgacattgaat 51888430  T
Q  110 tagccctctacatctttt-tccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
     | ||||||  ||||||| ||||  ||||| | ||||||||||||| |||||||||| ||||||    
T  51888429 cacccctctcaatcttttatcccctttcttccgatctaaacaagtgattttcacatatatcaag 51888366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 10259188 - 10259044
Alignment:
Q  29 aaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatc--ttt 126  Q
    ||||||||||||||||| |||| ||||||||||||| || || ||  ||   |||||||||||||||||| || ||| ||  | |||||||||||  |||    
T  10259188 aaactccaacttctctctaaacattctttctccttcgtttattaaaaagaactggttttaggtcattttt-gacctaaaatcacccctctacatcgtttt 10259090  T
Q  127 ttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    ||| || ||||||| |||||||||| ||||||||||||| ||||||    
T  10259089 ttctcttttctttcgatctaaacaaatggttttcacatatatcaag 10259044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 33920853 - 33920937
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 99  Q
    ||||||||||||||||||| |||||| || | |||| |||||||| ||||||||||| || | | ||||||||||||||||||||    
T  33920853 ttttttagtgagagaaacttcaacttttccctaaactttctttcttcttcattcatcgagaatgggtggttttaggtcatttttt 33920937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 164
Target Start/End: Complemental strand, 56040915 - 56040801
Alignment:
Q  54 ctttctccttcattcatcaaggaggtgtggttttaggtcatttttt-gatctagaactagccctctacatctttttccc---tcttctttcaatctaaac 149  Q
    ||||||||||| ||||   |||||  |||||||||||||||||||| || ||||||  | |||||||||||||||| ||   |||||||||||||||||     
T  56040915 ctttctccttcgttcactgaggagaggtggttttaggtcatttttttgacctagaatcacccctctacatcttttttccccttcttctttcaatctaaat 56040816  T
Q  150 aagtggttttcacat 164  Q
    |||||||||||||||    
T  56040815 aagtggttttcacat 56040801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 21662276 - 21662371
Alignment:
Q  5 ccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 101  Q
    |||||| |||||||||||||| ||||  ||||| || |||| |||  |||||||| ||||||||| | |||||| ||||||||||||||||||||||    
T  21662276 ccggtcataattttttagtgatagaatatccaatttttctctaaaatttctttcttcttcattca-cgaggaggggtggttttaggtcattttttga 21662371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 21671040 - 21671135
Alignment:
Q  5 ccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 101  Q
    |||||| |||||||||||||| ||||  ||||| || |||| |||  |||||||| ||||||||| | |||||| ||||||||||||||||||||||    
T  21671040 ccggtcataattttttagtgatagaatatccaatttttctctaaaatttctttcttcttcattca-cgaggaggggtggttttaggtcattttttga 21671135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 22039105 - 22038958
Alignment:
Q  16 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccc 115  Q
    ||||| ||||||||||||  ||||| | |||||   ||||||||| |||| ||||| || ||| |||||||||||||| |||| ||||||||| |  |||    
T  22039105 ttttttgtgagagaaactttaacttttttcaaagttttctttctctttcactcatcgagcaggggtggttttaggtcaattttggatctagaa-tcaccc 22039007  T
Q  116 tctacatctttttccctcttctttcaatctaaacaagtggttttcacat 164  Q
    | | ||||||||| ||  ||||||| ||||||| ||||| |||||||||    
T  22039006 tttgcatcttttttccctttctttctatctaaataagtgattttcacat 22038958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 51024781 - 51024713
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatc 71  Q
    |||||| |||||||||  ||||||||||||||||||||||||| | || ||||||||||||| ||||||    
T  51024781 agccggccctaattttccagtgagagaaactccaacttctctctatactttctttctccttcgttcatc 51024713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 36204689 - 36204531
Alignment:
Q  14 attttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagc 113  Q
    ||||||||||||||| ||||||| |||||||| |    ||||||||| |||| |||||||||| |  ||||||||||||||||||| | ||||||  | |    
T  36204689 attttttagtgagaggaactccaccttctctctaggttttctttctctttcaatcatcaaggatggatggttttaggtcatttttt-acctagaatcacc 36204591  T
Q  114 cctctacatctt-tttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    ||||| ||| || ||||| | ||||||| || |||| ||||| ||| |||||| ||||||    
T  36204590 cctctgcattttgtttcctttttctttcgatttaaataagtgatttccacatagatcaag 36204531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 172
Target Start/End: Original strand, 18935576 - 18935745
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 102  Q
    |||||| ||||| |||||||||||||||||||   |||||||| ||   ||||| ||| |||  ||||| |||||| ||| ||| |||||| |||||||     
T  18935576 agccggccctaagtttttagtgagagaaactctgtcttctctctaagttttcttcctctttcgctcatcgaggaggggtgatttaaggtcaatttttgac 18935675  T
Q  103 ctagaactagccctctacatc-tttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    |||||| |  |||||| |||| ||||||||  |||||| ||||||||  |||| |||||||||| ||||||    
T  18935676 ctagaa-tcaccctctgcatcttttttcccctttcttttaatctaaattagtgattttcacatacatcaag 18935745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 36161567 - 36161670
Alignment:
Q  67 tcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatctttttccctcttctttcaatctaaacaagtggttttcacataa 166  Q
    ||||| |||||  |||||||||||||||||||||| ||||||  | || ||| ||| ||||||||  ||||||||||||||| ||||| |||| |||||     
T  36161567 tcatcgaggagaggtggttttaggtcattttttgacctagaatcacccatctgcat-tttttcccatttctttcaatctaaataagtgatttttacatat 36161665  T
Q  167 atcaa 171  Q
    |||||    
T  36161666 atcaa 36161670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 53443928 - 53444039
Alignment:
Q  16 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccc 115  Q
    |||||||||||| ||||| ||||||||||| |||| || |||||| ||| |||||  |||||   ||||||||||||| ||||||| ||||||  | |||    
T  53443928 tttttagtgagataaacttcaacttctctctaaactttttttctctttcgttcattgaggagcgttggttttaggtca-tttttgacctagaaacacccc 53444026  T
Q  116 tctacatcttttt 128  Q
    ||||||| |||||    
T  53444027 tctacattttttt 53444039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 101
Target Start/End: Complemental strand, 29961246 - 29961151
Alignment:
Q  6 cggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 101  Q
    |||| |||| ||| || ||||||||||||||||||||||| |||| |||||| |||||  |||||| | ||||  || |||||||| |||||||||    
T  29961246 cggttctaactttctaatgagagaaactccaacttctctctaaactttctttttcctttgttcatcgaagagggatgattttaggttattttttga 29961151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 170
Target Start/End: Original strand, 9643178 - 9643338
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatc-aaggaggtgtggttttaggtcattttttgatctagaactagc 113  Q
    ||||||||||||||||||||||||||||||| ||   |||||| || ||   ||||| |||  || ||||||||| |||||||||||| ||||||  |      
T  9643178 ttttttagtgagagaaactccaacttctctctaagttttctttatcttttgctcatcgaagagggggtggttttatgtcattttttgacctagaatcact 9643277  T
Q  114 cctctacatc----tttttccctcttctttcaatctaaacaagtggttttcacataaatca 170  Q
    | ||| ||||    ||||||||  ||||||| ||||||| ||||| |||||||||| ||||    
T  9643278 catctgcatctttttttttcccatttctttcgatctaaataagtgattttcacatatatca 9643338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 1621805 - 1621719
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttag 89  Q
    |||||| |||||||||||||||||||||||||   |||||||| ||   ||||| ||| |||| ||||| |||||| ||| ||||||    
T  1621805 agccggccctaattttttagtgagagaaactctgtcttctctctaagttttcttcctctttcactcatcgaggaggcgtgattttag 1621719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 47320709 - 47320623
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 101  Q
    ||||||||||||||||||| ||||||||||  ||   ||| ||||| |||  ||||| || ||| |||||||||||||||| |||||    
T  47320709 ttttttagtgagagaaacttcaacttctctttaagttttccttctctttcgctcatcgagaaggggtggttttaggtcattctttga 47320623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 9713697 - 9713786
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 99  Q
    |||| |||||||||||||||||||| | |||||||| ||    |||||||| |||| ||||| |||||| ||| ||||| ||| ||||||    
T  9713697 cctagttttttagtgagagaaactctaccttctctctaagttctctttctctttcactcatcgaggaggggtgattttatgtcttttttt 9713786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 165
Target Start/End: Original strand, 52944223 - 52944264
Alignment:
Q  124 tttttccctcttctttcaatctaaacaagtggttttcacata 165  Q
    ||||||||| ||||||||||||||| ||||| ||||||||||    
T  52944223 tttttcccttttctttcaatctaaataagtgattttcacata 52944264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 40066262 - 40066211
Alignment:
Q  116 tctacatctttttccctctt--ctttcaatctaaacaagtggttttcacata 165  Q
    ||||||||||||| ||||||  |||||||| |||| ||||||||||||||||    
T  40066262 tctacatcttttttcctcttttctttcaatataaataagtggttttcacata 40066211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 165
Target Start/End: Complemental strand, 52061167 - 52061077
Alignment:
Q  73 aggaggtgtggttttaggtcattttttgatctagaactagccctctacatctttttccctcttctttcaatctaaacaagtggttttcacata 165  Q
    |||||| |||||||||||||  |||| |||||||||  | ||| || ||||||||||| | |||||| ||| |||| ||||||||||||||||    
T  52061167 aggaggagtggttttaggtccgtttt-gatctagaataatccc-ctgcatctttttccatgttcttttaatttaaataagtggttttcacata 52061077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 1e-43; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 172
Target Start/End: Complemental strand, 43397439 - 43397270
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 102  Q
    |||||| |||| |||| |||||||||||||||||||||||||  |||| |||||| | |||| |||||| || ||| ||||||||||||||||||||||     
T  43397439 agccggccctagttttctagtgagagaaactccaacttctctttaaactttcttttttcttcgttcatcgagaaggggtggttttaggtcattttttgac 43397340  T
Q  103 ctagaactagccctctacatctttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    ||||||  | | |||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||    
T  43397339 ctagaatcacctctctacatctttttcccttttctttcaatctaaataagtggttttcacatatatcaag 43397270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 4778532 - 4778695
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 102  Q
    |||||| |||| |||||||||| ||||||||||||||||| || |||| ||||||||||||| |||||| |||||| ||||||||||||||||||||||     
T  4778532 agccggccctagttttttagtgggagaaactccaacttctttctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgac 4778631  T
Q  103 ctagaactagccctctacatc--tttttccctcttctttcaatctaaacaagtggttttcacat 164  Q
    ||||||  | |||||||||||  ||||||||| |||||||||| |||| |||||||||||||||    
T  4778632 ctagaatcacccctctacatctttttttcccttttctttcaatttaaataagtggttttcacat 4778695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 10 - 164
Target Start/End: Original strand, 7646258 - 7646415
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||| ||||| |||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||||||||||| ||||||     
T  7646258 cctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaat 7646357  T
Q  110 tagccctctacatcttttt---ccctcttctttcaatctaaacaagtggttttcacat 164  Q
     | ||||||||||||||||   |||| ||||||| ||||||| |||||||||||||||    
T  7646358 cacccctctacatctttttttccccttttctttcgatctaaataagtggttttcacat 7646415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 21 - 164
Target Start/End: Original strand, 18763265 - 18763409
Alignment:
Q  21 agtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctac 120  Q
    ||||||||||||||||||||||||| |||| ||||||| ||||||| |||| |||||  ||||||||| |||||||||||| ||||||  | ||||||||    
T  18763265 agtgagagaaactccaacttctctctaaactttctttcaccttcatccatcgaggagaggtggttttatgtcattttttgacctagaatcacccctctac 18763364  T
Q  121 atc-tttttccctcttctttcaatctaaacaagtggttttcacat 164  Q
    ||| ||||||||| ||||||||||||||| |||||||||||||||    
T  18763365 atcttttttcccttttctttcaatctaaataagtggttttcacat 18763409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 164
Target Start/End: Original strand, 7448034 - 7448189
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||| ||||| |||||||||||||||||||| |||| |||||| |||||| |||||| |||||| |||||||||||||||||||||  ||||||     
T  7448034 cctagttttctagtgggagaaactccaacttctctctaaactttctttttccttcgttcatcgaggaggggtggttttaggtcattttttgtcctagaat 7448133  T
Q  110 tagccctctacatcttttt-ccctcttctttcaatctaaacaagtggttttcacat 164  Q
     | |||||||||||||||| |||| ||||||||||||||| || ||||||||||||    
T  7448134 cacccctctacatctttttccccttttctttcaatctaaataaatggttttcacat 7448189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 164
Target Start/End: Original strand, 4098889 - 4099045
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||||||||| |||||||||||||||||||| |||| ||||||||| ||| |||||| |||| | |||| ||||||||||||||||| ||||||     
T  4098889 cctagttttttagtgggagaaactccaacttctctctaaactttctttctctttccttcatcgaggaagggtggctttaggtcattttttgacctagaat 4098988  T
Q  110 tagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
     | || |||||||||||||  |||| ||||||||||||||| |||||||||||||||    
T  4098989 cacccatctacatcttttttccccttttctttcaatctaaataagtggttttcacat 4099045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 1421462 - 1421617
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtca-ttttttgatctagaactagc 113  Q
    |||| |||||||||||||||||||||||| | |||| ||||||||||||| |||||| |||||| |||||||||||||| ||||||||| |||||  | |    
T  1421462 ttttctagtgagagaaactccaacttctcgctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcatttttttgatatagaatcacc 1421561  T
Q  114 cctctacatcttttt-----ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    |||||||||||||||     |||| ||||||||||||||| |||||||||||||||    
T  1421562 cctctacatcttttttttcccccttttctttcaatctaaataagtggttttcacat 1421617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 172
Target Start/End: Original strand, 35220110 - 35220276
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 102  Q
    |||||| |||| |||| ||||||||||||||||||| |||||| |||| ||||||||||||||||||||   |||| |||||||||||| |||||||||     
T  35220110 agccggccctagttttctagtgagagaaactccaacctctctctaaactttctttctccttcattcatc---gaggggtggttttaggttattttttgac 35220206  T
Q  103 ctagaactagccctctacatctttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    ||||||  | |||||| |||||||| ||| | | ||  |||||||| |||||||||||||||||||||||    
T  35220207 ctagaatcacccctctccatcttttcccccccttttcaaatctaaataagtggttttcacataaatcaag 35220276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 10 - 164
Target Start/End: Original strand, 31788242 - 31788398
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    ||||||||| |||||||||||||||||||||||||| |||| |||||||| |||| |||||| |||||  | |||||||||| ||||||||| ||||||     
T  31788242 cctaattttctagtgagagaaactccaacttctctctaaactttctttcttcttcgttcatcgaggagaggcggttttaggtaattttttgacctagaat 31788341  T
Q  110 tagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
     | ||||||||||||||||  || | ||||||||||||||| ||||| |||||||||    
T  31788342 cacccctctacatcttttttcccattttctttcaatctaaataagtgattttcacat 31788398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 10 - 164
Target Start/End: Complemental strand, 36943437 - 36943281
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||| |||||||||||||||||| || |||| |||| ||||||||||||| || ||| |||||| |||||||||||||||||||||| ||||||     
T  36943437 cctagttttctagtgagagaaactccaatttatctctaaactttctttctccttcgttgatcgaggaggggtggttttaggtcattttttgacctagaat 36943338  T
Q  110 tagccctctacatctttttccctc--ttctttcaatctaaacaagtggttttcacat 164  Q
     | | |||||||||||||| ||||  ||||||||||||||| |||| ||||||||||    
T  36943337 caccactctacatcttttttcctcttttctttcaatctaaataagtagttttcacat 36943281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 7678181 - 7678029
Alignment:
Q  20 tagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctcta 119  Q
    |||||||||||||||||||||||||| |||| ||||||||||||| || ||| | |||| |||||||||||||||||||||| ||||||  | |||||||    
T  7678181 tagtgagagaaactccaacttctctctaaactttctttctccttcgttgatcgatgaggggtggttttaggtcattttttgacctagaatcacccctcta 7678082  T
Q  120 catctttt--------tccctcttctttcaatctaaacaagtggttttcacat 164  Q
    ||||||||        ||||| ||||||||||||||| |||||||||||||||    
T  7678081 catctttttttttttctcccttttctttcaatctaaataagtggttttcacat 7678029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 10 - 172
Target Start/End: Complemental strand, 11985543 - 11985380
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||| || ||||||||||||||||||||||| |||| ||||||||| ||||||| || |||||  ||||||||| |||||||||| | ||||||     
T  11985543 cctagttttctaatgagagaaactccaacttctctctaaactttctttctctttcattcttcgaggagtggtggttttaagtcattttttaacctagaat 11985444  T
Q  110 tagccctctacatcttttt-ccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
     | ||||||||| |||||| |||| |||||||||| |||| |||||||||||||||| ||||||    
T  11985443 cacccctctacaactttttccccttttctttcaatttaaataagtggttttcacatatatcaag 11985380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 164
Target Start/End: Complemental strand, 9169566 - 9169415
Alignment:
Q  14 attttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagc 113  Q
    ||||| ||||| |||||||||||||||||||| |||| ||||||||| ||| || ||| |||||| ||||||||||||||| |||||| ||||||  | |    
T  9169566 attttctagtgggagaaactccaacttctctctaaactttctttctcattcgtttatcgaggaggggtggttttaggtcat-ttttgacctagaatcacc 9169468  T
Q  114 cctctaca--tctttttccctcttctttcaatctaaacaagtggttttcacat 164  Q
    ||||||||  | ||||||||| ||||||||||||||| |||||||||||||||    
T  9169467 cctctacatttttttttcccttttctttcaatctaaataagtggttttcacat 9169415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 12677616 - 12677490
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 102  Q
    |||||| |||| |||| |||||||||||||||||||||||||| |||| ||||||||||||  |||||| |||||| || |||| ||||||||||||||     
T  12677616 agccggccctagttttctagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggtagtttaaggtcattttttgac 12677517  T
Q  103 ctagaactagccctctacatctttttc 129  Q
    ||||||  | |||||||||||||||||    
T  12677516 ctagaatcacccctctacatctttttc 12677490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 27097725 - 27097573
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 102  Q
    |||||| |||| |||| |||||  ||||||||||||||||||| |||| ||||||||||||| |||||| |||||| ||| ||||||||||||||||||     
T  27097725 agccggccctagttttctagtggaagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtgattttaggtcattttttgac 27097626  T
Q  103 ctagaactagccctctacatcttttt--ccctcttctttcaatctaaacaagtg 154  Q
    |||||| |  ||||||||||||||||  |||| ||||||  ||||||| |||||    
T  27097625 ctagaa-tcaccctctacatcttttttccccttttcttttgatctaaataagtg 27097573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 164
Target Start/End: Complemental strand, 37876893 - 37876755
Alignment:
Q  28 gaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatctttt 127  Q
    |||| ||||||||||||| |||| |||||||| |||| |||||| |||||| |||||||||||||| ||||||| ||||||  | || | ||||||||||    
T  37876893 gaaattccaacttctctctaaactttctttcttcttcgttcatcgaggaggggtggttttaggtcaatttttgacctagaatcacccttgtacatctttt 37876794  T
Q  128 tccc--tcttctttcaatctaaacaagtggttttcacat 164  Q
    ||||  | |||||| |||||||| |||||||||||||||    
T  37876793 tcccctttttcttttaatctaaataagtggttttcacat 37876755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 172
Target Start/End: Complemental strand, 29279883 - 29279720
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    ||||||||| | |||||||||||||||||||||||| || | |||||||| ||||||||||| |||| | | | |||||||||||||||||   || ||     
T  29279883 cctaattttcttgtgagagaaactccaacttctctctaacctttctttct-cttcattcatcgaggatgagcgattttaggtcattttttg-ggtaaaaa 29279786  T
Q  110 tagc-cctctacatctttttccctc--ttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    | || ||||||||||||||| ||||  ||||||||||||||| |||||||||||||||| ||||||    
T  29279785 tcgctcctctacatcttttttcctcttttctttcaatctaaataagtggttttcacatatatcaag 29279720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 10 - 172
Target Start/End: Complemental strand, 12648237 - 12648074
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| ||||| ||||||||||||||||||||||||  ||   ||||||||| || | || |  |||||| |||||||||||||||||||||| ||||||     
T  12648237 cctagtttttaagtgagagaaactccaacttctctttaagttttctttctcttttactcgttgaggaggggtggttttaggtcattttttgacctagaat 12648138  T
Q  110 tagccctctacatc-tttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
     | ||||| ||||| |||||| || ||||||||||||||| ||||| ||| |||||| ||||||    
T  12648137 cacccctccacatcttttttctcttttctttcaatctaaataagtgatttccacatatatcaag 12648074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 164
Target Start/End: Original strand, 38444982 - 38445108
Alignment:
Q  39 ttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatcttttt--ccctcttc 136  Q
    ||||||| |||| ||||||||||||| |||||| | |||  |||||||||||||| ||||||||||||||  | ||||||||||||||||  || | |||    
T  38444982 ttctctctaaactttctttctccttcgttcatcgatgagaggtggttttaggtca-tttttgatctagaatcacccctctacatcttttttccctttttc 38445080  T
Q  137 tttcaatctaaacaagtggttttcacat 164  Q
    ||||||| |||| |||||||||||||||    
T  38445081 tttcaatataaataagtggttttcacat 38445108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 164
Target Start/End: Complemental strand, 19062608 - 19062510
Alignment:
Q  66 ttcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatc-tttttccctcttctttcaatctaaacaagtggttttcacat 164  Q
    |||||| |||||| |||||||||||| ||||||||| ||||||  | ||||||||||| ||||||||| ||||||||||||||| |||||||||||||||    
T  19062608 ttcatcgaggagg-gtggttttaggttattttttgaactagaatcacccctctacatcctttttcccttttctttcaatctaaataagtggttttcacat 19062510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 162
Target Start/End: Complemental strand, 32448929 - 32448782
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    |||||||||||||||||||| |||||||||  |||  ||  || || |||| ||||| |||||| |||||||||||||||| ||||| ||| ||  | ||    
T  32448929 ttttttagtgagagaaactctaacttctctttaaatttttcttttctttcactcatcgaggaggggtggttttaggtcattatttgacctaaaatcaccc 32448830  T
Q  115 ctctacatctttttccctcttctttcaatctaaacaagtggttttcac 162  Q
    |||| ||||||||||||  ||||||| ||||||| ||||| |||||||    
T  32448829 ctctgcatctttttcccctttctttcgatctaaataagtgattttcac 32448782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 5428173 - 5428084
Alignment:
Q  18 tttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctaga 107  Q
    ||||| |||||||||||||||||||||| |||  ||||||||||||| |||||| |||||| |||||||||||| | ||||||| |||||    
T  5428173 tttagagagagaaactccaacttctctctaaattttctttctccttcgttcatcgaggaggggtggttttaggttaatttttgacctaga 5428084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 172
Target Start/End: Original strand, 14955309 - 14955472
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| ||||||||| ||| |||||| | ||||||| |||   ||||| ||| |||| ||||| |||||| ||| ||||| |||| ||||||| ||||||     
T  14955309 cctagttttttagtaagataaactctatcttctcttaaagttttcttcctctttcactcatcgaggaggggtgattttaagtcaatttttgacctagaat 14955408  T
Q  110 tagccctctacatctttttccctctt-ctttcaatctaaacaagtggttttcacataaatcaag 172  Q
     | |||||| ||||||||| |||||| ||||||||||||| ||||| ||| |||||| ||||||    
T  14955409 catccctctgcatcttttttcctctttctttcaatctaaataagtgatttccacatacatcaag 14955472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 31129056 - 31128974
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttt 97  Q
    ||||||||||||| ||||| ||||||||||| |||| ||||||||||||| || ||| |||||| ||| ||||||||||||||    
T  31129056 ttttttagtgagaaaaacttcaacttctctctaaactttctttctccttcgttgatcgaggaggggtgattttaggtcatttt 31128974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 80 - 172
Target Start/End: Original strand, 1415421 - 1415514
Alignment:
Q  80 gtggttttaggtcattttttgatctagaactagccctctacatc-tttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    |||||||||||| ||||||||||||||||  | ||||||||||| ||||||||| |||||||||| |||| ||||| |||||||| | ||||||    
T  1415421 gtggttttaggttattttttgatctagaatcacccctctacatcttttttcccttttctttcaatttaaataagtgattttcacacatatcaag 1415514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 165
Target Start/End: Original strand, 8809073 - 8809224
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    |||||||||  ||||||||| |||||||||| |||| ||||||||||||||| | || ||||   |||||||||| ||| ||||||| ||| ||  | ||    
T  8809073 ttttttagtaggagaaactctaacttctctctaaactttctttctccttcatacgtcgaggacaggtggttttagatca-tttttgacctaaaatcaccc 8809171  T
Q  115 ctctacatctttttccctc--ttctttcaatctaaacaagtggttttcacata 165  Q
    |||||||||||||| ||||  ||||||||||| ||| |||||| || ||||||    
T  8809172 ctctacatcttttttcctcttttctttcaatcaaaataagtggcttgcacata 8809224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 172
Target Start/End: Complemental strand, 10237525 - 10237363
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    ||||||||||||||||||||||||    |||||||  ||   ||||| ||| |||| ||||| || ||  ||| |||||||||| ||||||| ||||||     
T  10237525 cctaattttttagtgagagaaactttg-cttctctttaagttttcttcctctttcactcatcgagtagaggtgattttaggtcaatttttgacctagaat 10237427  T
Q  110 tagccctctacatctttttccctctt-ctttcaatctaaacaagtggttttcacataaatcaag 172  Q
     | |||||||||||||||| || ||| ||||||||||||| ||||| |||||||||| ||||||    
T  10237426 cacccctctacatcttttttcccctttctttcaatctaaataagtgattttcacatacatcaag 10237363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 24461238 - 24461386
Alignment:
Q  23 tgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacat 122  Q
    |||| |||||||||||||||||| ||   ||  ||||| |||| |||| ||||||| |||||||||||||||||||||| ||||||  |  ||||| |||    
T  24461238 tgagtgaaactccaacttctctctaagtttttattctctttcactcattaaggaggggtggttttaggtcattttttgacctagaatcactcctctgcat 24461337  T
Q  123 ctttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    |  |||  ||||| |||||||||||| ||||| ||| |||||| ||||||    
T  24461338 ccgttt-tctcttttttcaatctaaataagtgatttccacatatatcaag 24461386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 4904444 - 4904295
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    ||||||||| ||||||||| ||||||||||| |||| ||||||||| ||| || ||  | |||  ||||||||| |||||||||||| ||| ||  | |     
T  4904444 ttttttagtaagagaaacttcaacttctctctaaactttctttctcattcgtttattgaagagtggtggttttatgtcattttttgacctataatcacca 4904345  T
Q  115 ctctacatctttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    || |||||||||||        |||||||||||| |||||||||||||||| ||||||    
T  4904344 ctttacatcttttt--------tttcaatctaaataagtggttttcacatatatcaag 4904295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 42698987 - 42698928
Alignment:
Q  11 ctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcat 70  Q
    ||||||||||||||||||||||| |||||||| || |||| |||||||||||| ||||||    
T  42698987 ctaattttttagtgagagaaacttcaacttctttctaaactttctttctcctttattcat 42698928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 41694407 - 41694493
Alignment:
Q  16 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 102  Q
    |||||||| ||||||||| || |||||||| || | |||| ||||||||| ||||| || || ||| ||||||||||||||||||||    
T  41694407 tttttagtaagagaaacttcaccttctctctaagctttctctctccttcactcatcgagaagatgtagttttaggtcattttttgat 41694493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 172
Target Start/End: Complemental strand, 17995029 - 17994865
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| ||||| | ||| ||||||| || |||||||| |||| ||||||||| |||  || || | |||  |||||||||||||||||||||  ||| ||     
T  17995029 cctagtttttcaatgacagaaacttcatcttctctctaaactttctttctcattcggtcgtcgaagagaggtggttttaggtcattttttgccctaaaat 17994930  T
Q  110 tagccctctacatctttttccc--tcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
     | | |||| ||||||||| ||  | |||||||||||| || |||||||||||||| ||||||||    
T  17994929 cacctctctgcatcttttttcctattttctttcaatcttaataagtggttttcacacaaatcaag 17994865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 18108044 - 18107896
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    ||||| ||| ||||||| ||||  ||||||| ||   ||||||||| |||||||||  ||||   |||||||||||||||||||||| ||||||  | |     
T  18108044 tttttaagtaagagaaagtccactttctctctaagttttctttctctttcattcattgaggaatggtggttttaggtcattttttgacctagaatcacct 18107945  T
Q  115 ctctacatctttttccctcttctttcaatctaaacaagtggttttcaca 163  Q
    || | |||||||| |||  |||||||||  |||| ||||||||||||||    
T  18107944 ctttgcatcttttacccctttctttcaaattaaataagtggttttcaca 18107896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 36691657 - 36691732
Alignment:
Q  15 ttttttagtgagagaaactccaactt-ctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttag 89  Q
    |||| ||||||||||||||||||||| || || |||||||||||||||||| || ||  |||||| ||||||||||    
T  36691657 ttttctagtgagagaaactccaactttctttctaaaccttctttctccttccttaattgaggaggggtggttttag 36691732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 23933911 - 23933869
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctc 45  Q
    |||||||||||||||||||||||||| ||||||| ||||||||    
T  23933911 agccggtcctaattttttagtgagagtaactccaccttctctc 23933869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 36175712 - 36175666
Alignment:
Q  52 ttctttctccttcattcatcaaggaggtgtggttttaggtcattttt 98  Q
    ||||||||||||||||||||||| ||  |||||||||||||||||||    
T  36175712 ttctttctccttcattcatcaagaagaggtggttttaggtcattttt 36175666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 28872069 - 28871987
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 99  Q
    ||||||||||||||||||||||  ||||||| ||   || |||||| |||||||||| |||| | ||||||||||||| ||||||    
T  28872069 ttttttagtgagagaaactccacattctctctaat--ttttttctcattcattcatcgaggatgagtggttttaggtcttttttt 28871987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 172
Target Start/End: Original strand, 37994103 - 37994223
Alignment:
Q  52 ttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatctt-tttccctcttctttcaatctaaaca 150  Q
    ||||||||| |||| ||||| |||| | |||||||||||||| ||||||| ||||||  | |||||| ||| || ||||||  ||||||| || |||| |    
T  37994103 ttctttctctttcaatcatcgaggaagggtggttttaggtca-tttttgacctagaatcacccctctgcattttgtttcccctttctttcgatttaaata 37994201  T
Q  151 agtggttttcacataaatcaag 172  Q
    |||| |||||||||| ||||||    
T  37994202 agtgattttcacatagatcaag 37994223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 3308788 - 3308888
Alignment:
Q  73 aggaggtgtggttttaggtcattttttgatctagaactagccctctacatctttttccctcttc-tttcaatctaaacaagtggttttcacataaatcaa 171  Q
    |||||| ||| |||||||||| ||||||| ||||||  | |||| | ||||||||| || |||  |||||||||||| ||||| |||||||||| |||||    
T  3308788 aggaggggtgattttaggtcaatttttgacctagaatcacccctttgcatcttttttcccctttatttcaatctaaataagtgattttcacatacatcaa 3308887  T
Q  172 g 172  Q
    |    
T  3308888 g 3308888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 37416493 - 37416576
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt 98  Q
    ||||||| ||||||||||| ||||||||||| |||  || ||| || ||||||| || | |||| ||| |||||||||||||||    
T  37416493 ttttttaatgagagaaacttcaacttctctctaaattttttttatctttcattcgtcgatgaggggtgattttaggtcattttt 37416576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 164
Target Start/End: Complemental strand, 4041842 - 4041752
Alignment:
Q  75 gaggtgtggttttaggtcattttttgatctagaactagccctctacatcttttt-ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    |||| |||||||| | ||||  ||||| ||||||  | |||||||||| ||||| |||  ||||||||||||||| |||||||||||||||    
T  4041842 gaggggtggttttggatcatactttgacctagaatcacccctctacattttttttcccgtttctttcaatctaaataagtggttttcacat 4041752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 31128967 - 31128929
Alignment:
Q  134 ttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    ||||||||||||||| |||||||||||||||| ||||||    
T  31128967 ttctttcaatctaaataagtggttttcacatatatcaag 31128929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 25509379 - 25509291
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 99  Q
    ||||||||| |||||||| |||||| ||||| |||| || | |||||||| |||| |||||| ||||   ||||||||||||| ||||||    
T  25509379 cctaattttctagtgagaaaaactcaaacttttctctaa-ctttctttcttcttcgttcatcgaggaatggtggttttaggtcttttttt 25509291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 29173917 - 29173876
Alignment:
Q  124 tttttccctcttctttcaatctaaacaagtggttttcacata 165  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||    
T  29173917 tttttcccttttctttcaatccaaataagtggttttcacata 29173876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 4042278 - 4042230
Alignment:
Q  22 gtgagagaaactccaacttctctcaaaaccttctttctccttcattcat 70  Q
    |||||||||||||||||||||||| |||| || |||||| ||| |||||    
T  4042278 gtgagagaaactccaacttctctctaaactttttttctcattccttcat 4042230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 15261 - 15420
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 102  Q
    |||||| |||| |||| |||||||||||||| ||||||||||| |||| ||||||||||||| ||| || |||||| ||||||||||||||||||||||     
T  15261 agccggccctagttttctagtgagagaaacttcaacttctctctaaactttctttctccttcgttcttcgaggaggggtggttttaggtcattttttgac 15360  T
Q  103 ctagaactagccctctacatcttttt-ccctcttctttcaatctaaacaagtggttttca 161  Q
    ||||||  | |||||||||||||||| |||| ||||||||||||||| ||||||||||||    
T  15361 ctagaatcacccctctacatctttttccccttttctttcaatctaaataagtggttttca 15420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 2e-42; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 171
Target Start/End: Original strand, 7035996 - 7036166
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 102  Q
    |||||| |||| |||| ||||||||||||||| |||||||||| |||| |||||||||||||||||||||||| || ||||||||||||||||||||||     
T  7035996 agccggccctagttttctagtgagagaaactcaaacttctctctaaactttctttctccttcattcatcaaggtggggtggttttaggtcattttttgac 7036095  T
Q  103 ctagaactagccctctacatctttttccctc--ttctttcaatctaaacaagtggttttcacataaatcaa 171  Q
    ||| ||  |  | ||||||||||||| ||||  ||||||||||||||| |||||||||||||||| |||||    
T  7036096 ctaaaatcactcatctacatcttttttcctcttttctttcaatctaaataagtggttttcacatatatcaa 7036166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 38597566 - 38597728
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 102  Q
    |||||| |||| |||| |||||||||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||| |||||||||     
T  38597566 agccggccctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggttattttttgac 38597665  T
Q  103 ctagaactagccctctacatc-tttttccctcttctttcaatctaaacaagtggttttcacat 164  Q
    ||||||  | ||||||||||| ||||||||| |||||||||| |||| ||||| |||||||||    
T  38597666 ctagaatcacccctctacatcttttttccctattctttcaatttaaataagtgattttcacat 38597728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 13006997 - 13007160
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 102  Q
    |||||| |||| |||||||||| |||||||||||||||||||| |||| ||||||||||||| |||||| |||||  ||||||||||||||||||||||     
T  13006997 agccggccctagttttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagaggtggttttaggtcattttttgac 13007096  T
Q  103 ctagaactagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    ||||||  | ||||||||| ||||||  || | ||||||||||||||| |||||||||||||||    
T  13007097 ctagaatcacccctctacaccttttttcccattttctttcaatctaaataagtggttttcacat 13007160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 172
Target Start/End: Original strand, 38007143 - 38007295
Alignment:
Q  20 tagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctcta 119  Q
    ||||||||||||||| | |||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||||||||||| || |||  | |||||||    
T  38007143 tagtgagagaaactcaatcttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctcgaatcacccctcta 38007242  T
Q  120 catctttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    ||||||||||||| |||||||||| |||| |||||||||||||| | ||||||    
T  38007243 catctttttcccttttctttcaatttaaataagtggttttcacacatatcaag 38007295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 172
Target Start/End: Complemental strand, 26878380 - 26878228
Alignment:
Q  21 agtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctac 120  Q
    ||||||||||||| ||||||||||| |||| |||||||||||||||||||| |||||  ||||||||| |||| ||||||||||||||  | | ||||||    
T  26878380 agtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggagaggtggttttatgtca-tttttgatctagaatcacctctctac 26878282  T
Q  121 atcttttt--ccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    ||||||||  |||| ||||||||||||||| |||||||||||||||||||||||    
T  26878281 atctttttcccccttttctttcaatctaaataagtggttttcacataaatcaag 26878228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 15 - 162
Target Start/End: Complemental strand, 6012446 - 6012297
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    |||||||||| |||||||||||||||||||| |||| ||||||||||||| |||||  |||||| ||||||||||||||||||||||  |||||  | ||    
T  6012446 ttttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacatagaatcaccc 6012347  T
Q  115 ctctacatct--ttttccctcttctttcaatctaaacaagtggttttcac 162  Q
    ||||||||||  |||||||| ||||||||||||||| ||||| |||||||    
T  6012346 ctctacatctttttttcccttttctttcaatctaaataagtgtttttcac 6012297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 164
Target Start/End: Original strand, 34945204 - 34945353
Alignment:
Q  17 ttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccct 116  Q
    |||||||| |||||||||||| ||||||| |||| ||||||||||||| |||||| | || |  ||||||||||||||||||||| ||||||  | || |    
T  34945204 ttttagtgggagaaactccaaattctctctaaactttctttctccttcgttcatcgaagaaggatggttttaggtcattttttgacctagaatcaccctt 34945303  T
Q  117 ctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    ||||||||||||  |||| ||||||||||||||| |||||||||||||||    
T  34945304 ctacatcttttttccccttttctttcaatctaaataagtggttttcacat 34945353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 10 - 162
Target Start/End: Original strand, 26825204 - 26825360
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt--gatctaga 107  Q
    |||| |||| ||||| |||||||||||| ||||||| |||| ||||||||||||| |||||| |||||| ||||||||||||| ||||||  || |||||    
T  26825204 cctagttttctagtgggagaaactccaatttctctctaaactttctttctccttctttcatcgaggaggggtggttttaggtcttttttttggacctaga 26825303  T
Q  108 actagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcac 162  Q
    |  | | ||||||||||||||  |||| ||||||||||||||| |||||||||||||    
T  26825304 atcaccactctacatcttttttccccttttctttcaatctaaataagtggttttcac 26825360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 31392065 - 31391913
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    |||| |||||||| ||| || |||||||||| |||| |||||||||| || |||||| |||||| |||||||||||||||||||||| ||||||  | ||    
T  31392065 ttttctagtgagaaaaattctaacttctctctaaactttctttctccatcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcaccc 31391966  T
Q  115 ctctacatcttttt---ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    ||||||||||||||   |||| |||  |||||||||| |||||||||||||||    
T  31391965 ctctacatctttttctccccttttcgatcaatctaaataagtggttttcacat 31391913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 172
Target Start/End: Original strand, 14211009 - 14211169
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||||||||||||||||||||||||   |||||||| ||   ||||| ||| |||| ||||| |||||| ||| |||||||||| ||||||| ||||||     
T  14211009 cctaattttttagtgagagaaactctgtcttctctctaagttttcttcctctttcactcatcgaggagg-gtgattttaggtcaatttttgacctagaat 14211107  T
Q  110 tagccctctacatctttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
     | |||||| ||||||||||||| ||||||||||||||| ||||| |||||||||| ||||||    
T  14211108 cacccctctgcatctttttccct-ttctttcaatctaaataagtgattttcacatacatcaag 14211169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 26 - 164
Target Start/End: Complemental strand, 9114022 - 9113882
Alignment:
Q  26 gagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatctt 125  Q
    ||||||||| |||||||||| |||| ||||||||| ||| |||||| |||||| ||| |||||||||||||||| | ||||||  | |||||||||||||    
T  9114022 gagaaactctaacttctctctaaactttctttctctttcgttcatcgaggaggggtgattttaggtcattttttaacctagaatcacccctctacatctt 9113923  T
Q  126 ttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    |||  || | |||||| |||||||| |||||||||||||||    
T  9113922 ttttcccattttcttttaatctaaataagtggttttcacat 9113882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 10 - 164
Target Start/End: Original strand, 25979933 - 25980089
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||| ||||||| |||||||||||||||||| |||| ||||||||||||| |||||| |||| | ||||||| |||||||||||||| || |||     
T  25979933 cctagttttctagtgagcgaaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggtggtttcaggtcattttttgacctggaat 25980032  T
Q  110 tagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    || || |||||||||||||  |||| |  |||||| ||||| |||||||||| ||||    
T  25980033 tacccttctacatcttttttcccctttgttttcaacctaaataagtggttttaacat 25980089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 172
Target Start/End: Complemental strand, 11977250 - 11977086
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttag-gtcattttttgatctagaa 108  Q
    |||| |||| ||||||||||||||| |||||||||| |||| ||||||||||||| |||||| || ||| ||||||||||  |  |||||| | ||||||    
T  11977250 cctagttttctagtgagagaaactctaacttctctctaaactttctttctccttcgttcatcgagaaggggtggttttagatttttttttttacctagaa 11977151  T
Q  109 ctagccctctacatc-tttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
      |  |||| ||||| ||||||||| ||||||||||||||| |||||||||||||||| ||||||    
T  11977150 tcaaacctcgacatcttttttcccttttctttcaatctaaataagtggttttcacatatatcaag 11977086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 172
Target Start/End: Original strand, 15571261 - 15571425
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt-gatctagaa 108  Q
    |||| |||| ||||||||||||||| |||||||||| || | |||||||||||||||||||| |||||   |||||||| |||||||||| || ||||||    
T  15571261 cctagttttctagtgagagaaactctaacttctctccaagctttctttctccttcattcatcgaggagaaatggttttatgtcatttttttgacctagaa 15571360  T
Q  109 ctagccctctacatctttttcc-ctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
      | || || |||||||||| | |  ||||||||||||||| |||||||||||||||| ||||||    
T  15571361 tcatccatcaacatcttttttctcatttctttcaatctaaataagtggttttcacatatatcaag 15571425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 10 - 172
Target Start/End: Original strand, 39567071 - 39567234
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    ||||||||||||||||||||||| ||  |||||||  ||   ||||| ||| |||| ||||| |||||| ||| |||||||||| ||||||| ||||||     
T  39567071 cctaattttttagtgagagaaacaccgtcttctctttaagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaat 39567170  T
Q  110 tagccctctacatctttttccctc-ttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
     |  ||||| |||||||||||| | ||||||||||||||| ||||| |||||||||| ||||||    
T  39567171 cacgcctctgcatctttttccccctttctttcaatctaaataagtgattttcacatacatcaag 39567234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 172
Target Start/End: Complemental strand, 8096792 - 8096647
Alignment:
Q  27 agaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatcttt 126  Q
    ||||| ||||||||||||| |||| || ||||| |||| || ||  ||||||  |||||||||||||||||| || ||||||  | |||||||  |||||    
T  8096792 agaaattccaacttctctctaaactttttttcttcttcgtttattgaggaggattggttttaggtcattttt-gacctagaatcacccctctatttcttt 8096694  T
Q  127 tt-ccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    || |||| ||||||||||||||| |||||||||||||||| ||||||    
T  8096693 tttcccttttctttcaatctaaataagtggttttcacatatatcaag 8096647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 24230107 - 24229942
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctc-aaaaccttctttctccttcattcatcaaggaggtgtggttttagg-tcattttttg 100  Q
    |||||| |||| |||| |||||||||||||||||||||||||| ||||| |||||| | |||| |||||| |||||  | ||||||||| | ||||||||    
T  24230107 agccggccctagttttctagtgagagaaactccaacttctctctaaaactttctttgttcttcgttcatcgaggagtggaggttttaggtttattttttg 24230008  T
Q  101 -atctagaactagccctctacatctttttccc-tcttctttcaatctaaacaagtggttttcacat 164  Q
     | ||| ||  | |||||||||| |||||||| | ||||||||||||||| ||||| |||||||||    
T  24230007 tacctaaaatcacccctctacatatttttccctttttctttcaatctaaataagtgattttcacat 24229942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 7929979 - 7930134
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    |||| |||||||||||||||||| ||||||| |||| ||||||||||    ||||||||||||| ||| |||||||||| ||||||| ||||||  | ||    
T  7929979 ttttctagtgagagaaactccaaattctctctaaactttctttctcc----ttcatcaaggaggggtgattttaggtcaatttttgacctagaatcaccc 7930074  T
Q  115 ctctacatctttttccctc----ttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    || | |||| ||||| |||    |||||| |||||||  |||||||||||||||| ||||||    
T  7930075 ctgtgcatcattttctctctcttttcttttaatctaa--aagtggttttcacatatatcaag 7930134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 165
Target Start/End: Original strand, 13421711 - 13421874
Alignment:
Q  3 agccggtcctaattttt-tagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 101  Q
    ||||| ||||| ||||| |||||||||||||| ||||||||||  |||| |||||||| ||||||||||  || | |  || ||||||||||||||||||    
T  13421711 agccgatcctagtttttctagtgagagaaacttcaacttctctttaaactttctttcttcttcattcat-gagtatgaatgattttaggtcattttttga 13421809  T
Q  102 tctagaactagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacata 165  Q
      ||||| |  ||||||||||||||||  |||| |||||| |||||||| ||||||||||| ||||    
T  13421810 catagaa-tcaccctctacatctttttcccccttttcttttaatctaaataagtggttttcccata 13421874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 172
Target Start/End: Complemental strand, 2979583 - 2979462
Alignment:
Q  52 ttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatctttttccctctt-ctttcaatctaaaca 150  Q
    ||||| ||| |||| ||||| |||||| ||| |||||||||| ||||||| ||| ||  | |||||| ||||||||| |||||| ||||||||||||| |    
T  2979583 ttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctataatcacccctctgcatcttttttcctctttctttcaatctaaata 2979484  T
Q  151 agtggttttcacataaatcaag 172  Q
    |||| |||||||||| ||||||    
T  2979483 agtgattttcacatacatcaag 2979462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 164
Target Start/End: Original strand, 41630286 - 41630433
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||||||||| ||||||||||||| ||||||||||| || | |||||||    ||||||||| | || | |||||||||||||| ||||||| ||||||     
T  41630286 cctaatttttcagtgagagaaacttcaacttctctctaagctttctttc----tcattcatcgaagatg-gtggttttaggtca-tttttgacctagaa- 41630378  T
Q  110 tagccctctacatctttttccctcttctttcaatctaaacaagtggttttcacat 164  Q
    |  | |||||||||||||||||  ||||||||||||||| |||  ||||||||||    
T  41630379 tcactctctacatctttttcccatttctttcaatctaaataagccgttttcacat 41630433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 164
Target Start/End: Complemental strand, 11074199 - 11074057
Alignment:
Q  24 gagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggag-gtgtggttttaggtcattttttgatctagaactagccctctacat 122  Q
    ||||||||||||||||| |||| |||| |||||||||| || |||||| ||||| | |||||||||||| | ||||||| ||||||  | | |||||| |    
T  11074199 gagagaaactccaacttttctctaaactttctttctccctcgttcatcgaggagagggtggttttaggtta-tttttgacctagaatcatcactctacgt 11074101  T
Q  123 c--tttttccctcttctttcaatctaaacaagtggttttcacat 164  Q
    |  ||||||||| |||||| |||||||| |||||| ||||||||    
T  11074100 ctttttttcccttttcttttaatctaaataagtggctttcacat 11074057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 172
Target Start/End: Original strand, 6216676 - 6216838
Alignment:
Q  17 ttttagtgagagaaactccaa-cttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccc 115  Q
    |||||||||||||||||| || |||||||| |||| || |||||| ||| |||||| |||| | |||||||||||||||| ||||| ||| ||  | ||     
T  6216676 ttttagtgagagaaactcaaaacttctctctaaactttatttctcattcgttcatcgaggatgggtggttttaggtcattctttgacctaaaatcatcca 6216775  T
Q  116 tctacatctttttccctc------ttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    ||||||| | ||| || |      ||||||||||||||| |||||||||||||||| ||||||    
T  6216776 tctacatttgttttcccctttgctttctttcaatctaaataagtggttttcacatatatcaag 6216838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 172
Target Start/End: Complemental strand, 28541219 - 28541062
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| ||||||||||||||||||||   |||||||| ||   ||||| ||| |||| ||||| ||| || ||| |||||||||| ||||||| |||||      
T  28541219 cctatttttttagtgagagaaactctttcttctctctaagttttcttcctctttcactcatcgaggtggggtgattttaggtcaatttttgacctaga-- 28541122  T
Q  110 tagccctctacatc-tttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
        ||||| |||| ||||||||  ||||||||||||||| ||||| |||||||||| ||||||    
T  28541121 ----cctctgcatcttttttcccctttctttcaatctaaataagtgattttcacatacatcaag 28541062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 164
Target Start/End: Original strand, 10722603 - 10722705
Alignment:
Q  65 attcatcaaggaggtgtggttttaggtca-ttttttgatctagaa-ctagccctctacatctttttccctc-ttctttcaatctaaacaagtggttttca 161  Q
    ||||||| |||||  |||||||||||||| |||||||| |||||| |   |||||||||||||||| |||| ||||||||||||||| ||||| ||||||    
T  10722603 attcatcgaggagaggtggttttaggtcatttttttgacctagaatcaccccctctacatcttttttcctctttctttcaatctaaataagtgtttttca 10722702  T
Q  162 cat 164  Q
    |||    
T  10722703 cat 10722705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 35850574 - 35850694
Alignment:
Q  24 gagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctac--a 121  Q
    |||||||| ||||| ||||||| |||| || |||||| ||| || ||| |||||| ||||||||||||| |||||||| ||||||  | || |||||  |    
T  35850574 gagagaaagtccaatttctctctaaactttatttctcattcgtttatcgaggaggggtggttttaggtc-ttttttgacctagaatcacccatctacata 35850672  T
Q  122 tctttttccctcttctttcaat 143  Q
    | ||||||||| ||||||||||    
T  35850673 tttttttcccttttctttcaat 35850694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 170
Target Start/End: Original strand, 4770927 - 4771077
Alignment:
Q  24 gagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttg-atctagaactagccctctacat 122  Q
    ||||||||||| |||||||||| |||| |||||||| |||| || ||| |||||| ||| |||||| |  ||||||  ||| | ||  | |||||| | |    
T  4770927 gagagaaactctaacttctctctaaactttctttcttcttcgttaatcgaggaggggtgattttagatttttttttttatccataatcacccctctgctt 4771026  T
Q  123 cttttt---ccctcttctttcaatctaaacaagtggttttcacataaatca 170  Q
    ||||||   || | ||||||||||||||| |||||||||||||||| ||||    
T  4771027 cttttttttcctttttctttcaatctaaataagtggttttcacatatatca 4771077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 172
Target Start/End: Complemental strand, 8985257 - 8985082
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggtt-----ttaggtcatttt 97  Q
    |||||| ||||  |||||||||||||||||||||||||||||| ||   ||| ||||| |||| || |  |||||| ||| ||     ||||||||||||    
T  8985257 agccggccctagctttttagtgagagaaactccaacttctctctaagttttcgttctctttcactcgtttaggaggggtgattttaggttaggtcatttt 8985158  T
Q  98 ttgatctagaactagccctctacat-ctttttccctcttctttcaatct-aaacaagtggttttcacataaatcaag 172  Q
    |||||||| || |  |||||| ||| |||||||| | |||||||||||| ||| ||||| ||| |||||| ||||||    
T  8985157 ttgatcta-aaatcaccctctgcatcctttttccattttctttcaatctaaaataagtgatttccacatatatcaag 8985082  T

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Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 220
Target Start/End: Complemental strand, 9113853 - 9113824
Alignment:
Q  191 gtgatttcgtcgtctaagtgcggcgttctg 220  Q
    ||||||||||||||||||||||||||||||    
T  9113853 gtgatttcgtcgtctaagtgcggcgttctg 9113824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 28386830 - 28386877
Alignment:
Q  124 tttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    ||||||||| |||||||||||||| ||||||| ||||||||| ||||||    
T  28386830 tttttcccttttctttcaatctaaccaagtgg-tttcacatatatcaag 28386877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 172
Target Start/End: Original strand, 1120 - 1283
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||||||||||| |||||| ||||||||||| |||  ||||||||||||| |||||| |||||  |||||||||||||||||||||| ||||||     
T  1120 cctagttttttagtgagtgaaacttcaacttctctctaaattttctttctccttcgttcatcgaggagaggtggttttaggtcattttttgacctagaat 1219  T
Q  110 tagccctctacatc-tttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
     | |||||||| || ||||||||| |||||||| |||||| |||||||||||||||| ||||||    
T  1220 cacccctctacttcttttttcccttttctttcactctaaataagtggttttcacatatatcaag 1283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 50555 - 50718
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 102  Q
    |||||| |||| |||| ||||| ||||||||||||||||| || |||| ||||||||||||| |||||  |||||| ||| |||||||||| |||||||     
T  50555 agccggccctagttttctagtgggagaaactccaacttctttctaaactttctttctccttcgttcattgaggaggggtgattttaggtcactttttgac 50654  T
Q  103 ctagaactagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    ||||||  | ||||||||||||||||  |||| ||||||||||||||| |||||||||||||||    
T  50655 ctagaatcatccctctacatcttttttccccttttctttcaatctaaataagtggttttcacat 50718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 2279 - 2134
Alignment:
Q  16 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccc 115  Q
    ||||||| |||||||||||||||||||||| |||| || |||||||||| |||||| |||||| ||||||||| |||||||||||||||||||  | |||    
T  2279 tttttagagagagaaactccaacttctctctaaactttttttctccttcgttcatcgaggaggagtggttttaagtcattttttgatctagaatcacccc 2180  T
Q  116 tctacatcttttt---ccctcttctttcaatctaaacaagtggttt 158  Q
    |||||||||||||   || | ||||||||||||||| |||||||||    
T  2179 tctacatcttttttcccctttttctttcaatctaaataagtggttt 2134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 10 - 164
Target Start/End: Complemental strand, 33061 - 32905
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||| |||| ||||||||||||||| |||||||||| |||| |||||||| |||| || ||| |||||| ||||||||||||||||||||||  |||||     
T  33061 cctagttttctagtgagagaaactctaacttctctctaaactttctttcttcttcgtttatcgaggaggagtggttttaggtcattttttgacatagaat 32962  T
Q  110 tagccctctacatcttt--ttccctcttctttcaatctaaacaagtggttttcacat 164  Q
     | ||||||||||||||  | |||| ||||||||||||||| |||||||||||||||    
T  32961 cacccctctacatcttttgtccccttttctttcaatctaaataagtggttttcacat 32905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 72184 - 72021
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 102  Q
    |||||| |||| |||| ||||| |||||||| ||||||||||| |||| ||||||||||||| |||||| |||||| ||||||||||||||||||||||     
T  72184 agccggccctagttttctagtgggagaaacttcaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgac 72085  T
Q  103 ctagaactagccctctacatcttttt--ccctcttctttcaatctaaacaagtggttttcacat 164  Q
    ||||||  | |  ||| |||||||||  |||| ||||||||||| ||| |||||||||||||||    
T  72084 ctagaatcaccattcttcatctttttcccccttttctttcaatccaaataagtggttttcacat 72021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 15141 - 14998
Alignment:
Q  20 tagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctcta 119  Q
    |||||||||||||||||| ||||||| |||| |||||||||||||||||||| |||| ||||||  |||||| ||||||||| ||||||  | | |||||    
T  15141 tagtgagagaaactccaatttctctctaaactttctttctccttcattcatcgaggatgtgtggggttaggttattttttgacctagaatcaccactcta 15042  T
Q  120 catcttttt--ccctcttctttcaatctaaacaagtggttttca 161  Q
    |||||||||  || | ||||||||||||||| |||| |||||||    
T  15041 catcttttttccctttttctttcaatctaaataagtcgttttca 14998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 58387 - 58229
Alignment:
Q  15 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 114  Q
    ||||||||||||||||||||||||||||||| ||   ||| || || |||| || || |||||| |||||||||||||||||||||| ||| ||  | ||    
T  58387 ttttttagtgagagaaactccaacttctctctaagttttcgttttctttcactcgtcgaggaggggtggttttaggtcattttttgacctaaaatcaccc 58288  T
Q  115 ctctacat-ctttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    |||| ||| |||||| ||| ||||||||||||||| ||||| ||| |||||| ||||||    
T  58287 ctctgcatccttttttccttttctttcaatctaaataagtgatttccacatatatcaag 58229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 172
Target Start/End: Original strand, 7500 - 7655
Alignment:
Q  16 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccc 115  Q
    ||||||||||| ||||||||  |||||||| ||   |||||||||||| ||||||| ||||||  ||||||||||||||||||||| ||||||  |  |     
T  7500 tttttagtgagggaaactccg-cttctctctaagttttctttctcctttattcatcgaggagggatggttttaggtcattttttgacctagaatcactca 7598  T
Q  116 tctacatctttttccctcttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    ||| |||||||| |||  |||||||||| |||| |||||||||||||||| ||||||    
T  7599 tctgcatcttttacccctttctttcaatttaaataagtggttttcacatatatcaag 7655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 172
Target Start/End: Complemental strand, 2121 - 1967
Alignment:
Q  19 ttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctct 118  Q
    |||||||||||||||||||||||| ||||||| |||||||| ||||||||||  ||||| |||| ||||||||| |||||| | ||| ||  |  | |||    
T  2121 ttagtgagagaaactccaacttctttcaaaactttctttcttcttcattcattgaggagatgtgtttttaggtc-tttttttacctaaaatcactcatct 2023  T
Q  119 acatctttttccctc--ttctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    |||||||||| ||||  |||||||||| |||| ||||||||| |||||| ||||||    
T  2022 acatcttttttcctcttttctttcaatttaaataagtggtttgcacatatatcaag 1967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 39 - 172
Target Start/End: Original strand, 12721 - 12855
Alignment:
Q  39 ttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatctttttc-cctcttct 137  Q
    |||||||  ||| ||||||||| || |||||||||||||  |||||||||||||||||||||| ||||||  | | || ||||| |||||| ||| ||||    
T  12721 ttctctcttaactttctttctctttgattcatcaaggagaggtggttttaggtcattttttgacctagaatcaccgctatacatatttttctccttttct 12820  T
Q  138 ttcaatctaaacaagtggttttcacataaatcaag 172  Q
     ||||| |||| |||||||||||||||| ||||||    
T  12821 atcaatttaaataagtggttttcacatacatcaag 12855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 71549 - 71435
Alignment:
Q  56 ttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatctttttccctcttctttcaatctaaacaagtgg 155  Q
    ||||||||||||||   || ||| ||||||||||||||||||| || ||| ||  | |||||||||| |||| | || ||||||||||||||||||||||    
T  71549 ttctccttcattcacagagaaggggtggttttaggtcattttt-gacctaaaatcacccctctacatattttcctcttttctttcaatctaaacaagtgg 71451  T
Q  156 ttttcacataaatcaa 171  Q
    |||||||||| |||||    
T  71450 ttttcacatatatcaa 71435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 25649 - 25525
Alignment:
Q  3 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 102  Q
    |||||| |||| |||| |||||||||||||| |||||| |||| |||     |||||||||| |||||| |||||| ||||||||| ||||||||||||     
T  25649 agccggccctagttttctagtgagagaaacttcaacttttctctaaaaaaattttctccttcgttcatcgaggaggggtggttttatgtcattttttgac 25550  T
Q  103 ctagaactagccctctacatctttt 127  Q
    ||| ||  | |||||||||||||||    
T  25549 ctataatcacccctctacatctttt 25525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 19348 - 19261
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt 98  Q
    ||||||||||||||||||||||||||||||||||||  ||  ||||||||| |||| ||||| |||||| ||||||||| ||| |||||    
T  19348 cctaattttttagtgagagaaactccaacttctctc-taattttctttctctttcactcatcgaggaggggtggttttatgtcgttttt 19261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 172
Target Start/End: Complemental strand, 1987 - 1824
Alignment:
Q  10 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 109  Q
    |||||||||||||||||||||||||   |||||||| |    ||||| ||| |||| | ||| |||||| ||| | |||||||| ||||||| ||||||     
T  1987 cctaattttttagtgagagaaactctgtcttctctctacgttttcttcctctttcacttatcgaggaggggtgatattaggtcaatttttgacctagaat 1888  T
Q  110 tagccctctacatctttttccctctt-ctttcaatctaaacaagtggttttcacataaatcaag 172  Q
     | | |||| ||||||||| || ||| ||||||||||||| ||||| |||||||||| ||||||    
T  1887 cacctctctgcatcttttttcccctttctttcaatctaaataagtgattttcacatacatcaag 1824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 10672 - 10815
Alignment:
Q  27 agaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctacatcttt 126  Q
    |||||||| |||||||||| |||| | ||| |||||||||||||| |||||  ||||||||||||||  |||||| ||| |   | ||||||| ||||||    
T  10672 agaaactctaacttctctctaaacttgcttcctccttcattcatcgaggagaggtggttttaggtca--ttttgacctaaagtcacccctctagatcttt 10769  T
Q  127 ttc-cctcttctttcaatctaaacaagtggttttcacataaatcaa 171  Q
    ||| | | |||||| ||| |||| |||||||||||||||| |||||    
T  10770 ttcgctttttctttgaatgtaaataagtggttttcacatatatcaa 10815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 31565 - 31419
Alignment:
Q  29 aaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatt-ttttgatctagaactagccctctacatctttt 127  Q
    |||||||||||| |||  |||| ||||||||||||| |||||| || ||| ||| ||||| |||||| |||| | | | ||  |  ||||||||||||||    
T  31565 aaactccaacttttctttaaactttctttctccttcgttcatcgagcaggagtgattttatgtcattgtttttaccaaaaatcactcctctacatctttt 31466  T
Q  128 tccctctt--ctttcaatctaaacaagtggttttcacataaatcaag 172  Q
    | ||||||  |||||||| |||| |||| ||||||||||| ||||||    
T  31465 ttcctcttttctttcaatataaataagtagttttcacatatatcaag 31419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 37929 - 37979
Alignment:
Q  116 tctacatctttttccctctt-ctttcaatctaaacaagtggttttcacata 165  Q
    ||||||||||||| || ||| ||||||||||||| ||||||||||||||||    
T  37929 tctacatcttttttcccctttctttcaatctaaataagtggttttcacata 37979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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