View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10193_low_5 (Length: 304)

Name: NF10193_low_5
Description: NF10193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10193_low_5
NF10193_low_5
[»] chr3 (6 HSPs)
chr3 (1-294)||(19199143-19199437)
chr3 (16-226)||(6777837-6778048)
chr3 (1-217)||(1596237-1596454)
chr3 (1-217)||(34437781-34437997)
chr3 (230-277)||(34437674-34437721)
chr3 (12-101)||(21565966-21566054)
[»] chr1 (8 HSPs)
chr1 (1-222)||(43782700-43782922)
chr1 (1-217)||(48999827-49000044)
chr1 (1-222)||(45152677-45152899)
chr1 (1-141)||(40553596-40553736)
chr1 (10-226)||(3375894-3376110)
chr1 (12-141)||(33297214-33297343)
chr1 (230-282)||(45152954-45153005)
chr1 (228-278)||(3375795-3375845)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-222)||(180324-180546)
[»] chr7 (3 HSPs)
chr7 (1-220)||(12627421-12627641)
chr7 (1-227)||(1326840-1327067)
chr7 (10-141)||(38457493-38457624)
[»] chr5 (9 HSPs)
chr5 (37-220)||(26653528-26653712)
chr5 (37-220)||(26925113-26925297)
chr5 (11-217)||(13274093-13274300)
chr5 (1-141)||(2742997-2743137)
chr5 (85-141)||(21101423-21101479)
chr5 (230-294)||(26653769-26653833)
chr5 (230-294)||(26925354-26925418)
chr5 (12-133)||(24209211-24209332)
chr5 (230-285)||(21101616-21101672)
[»] chr8 (3 HSPs)
chr8 (1-226)||(37227721-37227947)
chr8 (10-156)||(14096700-14096846)
chr8 (230-277)||(37227623-37227670)
[»] chr2 (4 HSPs)
chr2 (10-226)||(31116886-31117103)
chr2 (1-120)||(28035647-28035766)
chr2 (230-277)||(28035925-28035972)
chr2 (230-288)||(31116777-31116835)
[»] chr4 (11 HSPs)
chr4 (10-132)||(25147344-25147466)
chr4 (1-217)||(42705139-42705356)
chr4 (1-141)||(39465348-39465486)
chr4 (222-277)||(3681088-3681143)
chr4 (230-277)||(25147612-25147659)
chr4 (230-277)||(32305590-32305637)
chr4 (230-277)||(39465623-39465670)
chr4 (1-107)||(32307880-32307986)
chr4 (1-94)||(3680825-3680918)
chr4 (104-141)||(32305774-32305811)
chr4 (230-274)||(42705035-42705079)
[»] scaffold0251 (2 HSPs)
scaffold0251 (10-221)||(16977-17192)
scaffold0251 (230-277)||(16875-16922)
[»] scaffold0408 (1 HSPs)
scaffold0408 (10-156)||(7042-7188)
[»] chr6 (3 HSPs)
chr6 (1-141)||(6285814-6285954)
chr6 (37-154)||(35014337-35014454)
chr6 (12-102)||(2029728-2029818)
[»] scaffold0007 (1 HSPs)
scaffold0007 (70-141)||(257345-257416)
[»] scaffold0010 (1 HSPs)
scaffold0010 (12-110)||(32353-32451)


Alignment Details
Target: chr3 (Bit Score: 207; Significance: 1e-113; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 19199143 - 19199437
Alignment:
Q  1 acattacgtcctttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagta 100  Q
    |||||||||||||| || |||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  19199143 acattacgtccttttagaacatatgctagtgctccggatggatcatggccggcaaatacaagagggtatgtcacttgccagagtgggttcttaggcagta 19199242  T
Q  101 cgagtatgtctagactattcccaggcctcctacagacattgggcctcttacggcaggggacgtagctatggccttcgcagagttt-ctctacatgccctc 199  Q
    | |||||||| | ||| ||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||| ||||    
T  19199243 ctagtatgtccaaactgttcccaggcctcctacaaacattgggcctcttacggcaggggacgtggttatggccttcgcagagtttgctctacatgtcctc 19199342  T
Q  200 agccagcaggagaggggtgatctagttttgtagagtatcacatcctattatgaacctccatgcgtccattcctgactacacagttgatgtccatc 294  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||    
T  19199343 agccagtaggagaggggtgatctatttttgtagagtatcacatcctattatgaacccccctgcgtccattcctgactacacagttgatgcccatc 19199437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 226
Target Start/End: Original strand, 6777837 - 6778048
Alignment:
Q  16 aggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagtacgagtatgtctagac 115  Q
    |||||||||||| || |||  ||||||||||||||| |||  ||| || |||  ||||||||| | || ||||| |||||||||||| ||||||| ||||    
T  6777837 aggacatatgctggtgctccggatggatcatggccgacaacgacaggatggtccgtcacttgctagagagggttcttaggcagtacgggtatgtccagac 6777936  T
Q  116 tattcccaggcctcctacagacattgggcctcttacggcaggggacgtagctatggccttcgcagagttt-ctctacatgccctcagccagcaggagagg 214  Q
    |||||  ||| ||||||||||||||| || | || ||||||  ||||| ||   ||||||| | |||||| ||||||||| ||||||||| ||| |||||    
T  6777937 tattctgagggctcctacagacattgagcttattgcggcagatgacgtggcccaggccttcacggagtttgctctacatgtcctcagccatcagcagagg 6778036  T
Q  215 ggtgatctagtt 226  Q
    ||||||| ||||    
T  6778037 ggtgatccagtt 6778048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 1596454 - 1596237
Alignment:
Q  1 acattacgtcctttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagta 100  Q
    |||| ||| |||||||||||||||||| ||||||  |||||||||||||| |||   ||| || |||  ||||||||||| || ||||| ||||||||||    
T  1596454 acatcacgccctttcaggacatatgctggtactccggatggatcatggccagcagcgacaggatggtccgtcacttgccaaagcgggttcttaggcagta 1596355  T
Q  101 cgagtatgtctagactattcccaggcctcctacagacattgggcctcttacggcaggggacgtagctatggccttcgcagagttt-ctctacatgccctc 199  Q
    |  ||||||| |||||||||  ||| ||||||||||||||| || | || ||||||  ||||| ||   |||||||   |||||| ||||||||| ||||    
T  1596354 caggtatgtccagactattctgagggctcctacagacattgagcttattgcggcagatgacgtggcccaggccttcatggagtttgctctacatgtcctc 1596255  T
Q  200 agccagcaggagaggggt 217  Q
    | ||| ||| ||||||||    
T  1596254 acccatcagcagaggggt 1596237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 34437997 - 34437781
Alignment:
Q  1 acattacgtcctttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagta 100  Q
    |||| ||| |||||||||||||||||| ||||||  |||||||||||| ||| |    || || |||  |||| || ||| || ||||| ||||||||||    
T  34437997 acatcacgccctttcaggacatatgctggtactccggatggatcatggtcggtagtggcaggatggtccgtcaatttccagagcgggttcttaggcagta 34437898  T
Q  101 cgagtatgtctagactattcccaggcctcctacagacattgggcctcttacggcaggggacgtagctatggccttcgcagagttt-ctctacatgccctc 199  Q
    || ||||||  |||||||||||||| ||||||| ||||||| || | || |||| |  ||||| || | || |||| | |||||| ||||||||| ||||    
T  34437897 cgggtatgtacagactattcccagggctcctactgacattgagcttattgcggcggatgacgtggcca-ggtcttcacggagtttgctctacatgtcctc 34437799  T
Q  200 agccagcaggagaggggt 217  Q
    ||||| ||||| ||||||    
T  34437798 agccatcaggataggggt 34437781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 277
Target Start/End: Complemental strand, 34437721 - 34437674
Alignment:
Q  230 tagagtatcacatcctattatgaacctccatgcgtccattcctgacta 277  Q
    ||||||||||||||||||| ||||||||| |||| |||||||||||||    
T  34437721 tagagtatcacatcctattgtgaacctccctgcgcccattcctgacta 34437674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 21565966 - 21566054
Alignment:
Q  12 tttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagtac 101  Q
    ||||||||| | |||| ||||||| ||||||||||||||| |||| | |||| ||| |||||||||||  || ||||| | |||||||||    
T  21565966 tttcaggacgtgtgct-gtactctggatggatcatggccgacaaacaaaagatggtgtgtcacttgcccgagcgggttctgaggcagtac 21566054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 8e-61; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 43782922 - 43782700
Alignment:
Q  1 acattacgtcctttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagta 100  Q
    |||||||| ||||||| |||||||||||||||||| |||||||||||| ||||||| ||| |||||| |||||||||||| || | ||| ||||||| ||    
T  43782922 acattacgccctttcacgacatatgctagtactctggatggatcatggtcggcaaagacatgagggtctgtcacttgccagagcgagttcttaggcaata 43782823  T
Q  101 cgagtatgtctagactattcccaggcctcctacagacattgggcctcttacggcaggggacgtagctatggccttcgcagagttt-ctctacatgccctc 199  Q
    |||||||||| ||||||| |||| ||||||||||||||||||||||||| || || ||||||| |||||||||| |   |||||| ||||||||| ||||    
T  43782822 cgagtatgtccagactatacccatgcctcctacagacattgggcctcttgcgtcaagggacgtggctatggcctccatggagtttgctctacatgtcctc 43782723  T
Q  200 agccagcaggagaggggtgatct 222  Q
    |||||||||||||||||||||||    
T  43782722 agccagcaggagaggggtgatct 43782700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 48999827 - 49000044
Alignment:
Q  1 acattacgtcctttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagta 100  Q
    |||| ||| |||||||||||||||||| ||||||  |||||||||||||||||||  ||| || |||  ||||||||||| || ||||| ||||||||||    
T  48999827 acatcacgccctttcaggacatatgctggtactccggatggatcatggccggcaacgacaggatggtccgtcacttgccagagcgggttcttaggcagta 48999926  T
Q  101 cgagtatgtctagactattcccaggcctcctacagacattgggcctcttacggcaggggacgtagctatggccttcgcagagttt-ctctacatgccctc 199  Q
    || |||||||||||||||||||||| ||||||||||||||| || | || |||| |  ||||| |||  ||||||| | |||||| ||||||||| ||||    
T  48999927 cgggtatgtctagactattcccagggctcctacagacattgagcttattgcggcggatgacgtggctcaggccttcacggagtttgctctacatgtcctc 49000026  T
Q  200 agccagcaggagaggggt 217  Q
    ||||| ||||| ||||||    
T  49000027 agccatcaggataggggt 49000044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 45152677 - 45152899
Alignment:
Q  1 acattacgtcctttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagta 100  Q
    |||| ||| |||||||||||||||| | |||||| ||||||||||||||||||||| ||| | ||||   | |||||| | || ||||| |||||||||     
T  45152677 acatcacgccctttcaggacatatgttggtactccagatggatcatggccggcaaagacatgcgggttcattacttgctagagcgggttcttaggcagtt 45152776  T
Q  101 cgagtatgtctagactattcccaggcctcctacagacattgggcctcttacggcaggggacgtagctatggccttcgcagagttt-ctctacatgccctc 199  Q
    || ||||||| ||||| |||| |||| |||||||||||||||||||||| || ||| ||| || ||||||||||||   |||||| |||||||||  |||    
T  45152777 cgggtatgtccagactgttcctaggcatcctacagacattgggcctcttgcgacagcggatgtggctatggccttcatggagtttgctctacatgttctc 45152876  T
Q  200 agccagcaggagaggggtgatct 222  Q
    ||||| | ||||| |||||||||    
T  45152877 agccaactggagatgggtgatct 45152899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 40553736 - 40553596
Alignment:
Q  1 acattacgtcctttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagta 100  Q
    |||| ||| ||||||| |||||||||| ||||||  ||||||||||||||||||   ||| || |||  ||||||||||| || ||||| ||||||||||    
T  40553736 acatcacgccctttcatgacatatgctggtactccggatggatcatggccggcagcgacaggatggtccgtcacttgccagagcgggttcttaggcagta 40553637  T
Q  101 cgagtatgtctagactattcccaggcctcctacagacattg 141  Q
    |||||||||| |||||||||||||| |||||||||||||||    
T  40553636 cgagtatgtccagactattcccagggctcctacagacattg 40553596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 10 - 226
Target Start/End: Complemental strand, 3376110 - 3375894
Alignment:
Q  10 cctttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagtacgagtatgt 109  Q
    |||||||||||||||  | ||||||  |||||||||||||||| | | ||| || |||  ||||||||||| || ||||| ||||||| |||  ||||||    
T  3376110 cctttcaggacatattttggtactccggatggatcatggccggtagagacaggatggtccgtcacttgccagagcgggttcttaggcaatacatgtatgt 3376011  T
Q  110 ctagactattcccaggcctcctacagacattgggcctcttacggcaggggacgtagctatggccttcgcagag-tttctctacatgccctcagccagcag 208  Q
    | |||||  ||||||  |||||||||| ||||||||||||  | ||| ||| || |||||| |||||   ||| |||||||||||| |||||||||||||    
T  3376010 ccagactggtcccagagctcctacagatattgggcctcttgtgccagaggaggtggctatgaccttcatggagttttctctacatgtcctcagccagcag 3375911  T
Q  209 gagaggggtgatctagtt 226  Q
    |||| |||||||||||||    
T  3375910 gaga-gggtgatctagtt 3375894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 141
Target Start/End: Complemental strand, 33297343 - 33297214
Alignment:
Q  12 tttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagtacgagtatgtct 111  Q
    |||||||||||||||| ||||||  ||||||||||||||| ||   ||| || |||  ||||||||||| || ||||| |||||||||||| ||||| |     
T  33297343 tttcaggacatatgctggtactccggatggatcatggccgacagcgacaggatggtccgtcacttgccagagcgggttcttaggcagtacgggtatgacc 33297244  T
Q  112 agactattcccaggcctcctacagacattg 141  Q
    |||||||||||||| |||||||||||||||    
T  33297243 agactattcccagggctcctacagacattg 33297214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 45152954 - 45153005
Alignment:
Q  230 tagagtatcacatcctattatgaacctccatgcgtccattcctgactacacag 282  Q
    ||||||||||||||||||| |||||| || |||| ||||||||||||||||||    
T  45152954 tagagtatcacatcctattgtgaacc-ccctgcggccattcctgactacacag 45153005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 278
Target Start/End: Complemental strand, 3375845 - 3375795
Alignment:
Q  228 tgtagagtatcacatcctattatgaacctccatgcgtccattcctgactac 278  Q
    ||||||||| ||||||||||| |||||| || |||| ||||||||||||||    
T  3375845 tgtagagtagcacatcctattgtgaacccccctgcggccattcctgactac 3375795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 180546 - 180324
Alignment:
Q  1 acattacgtcctttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagta 100  Q
    |||||| | |||||||||||||||| | ||||||  ||||||||||||||| |||| ||| |||||| |||||||||||| || ||||| ||||||||||    
T  180546 acattatgccctttcaggacatatgttggtactccggatggatcatggccgccaaagacaggagggtctgtcacttgccagagcgggttcttaggcagta 180447  T
Q  101 cgagtatgtctagactattcccaggcctcctacagacattgggcctcttacggcaggggacgtagctatggccttcgcagagttt-ctctacatgccctc 199  Q
    || ||||||||||||| ||||||||||||||||| ||||||||||||||  |||||||||| | |||||| |||||   |||||| ||||||||| ||||    
T  180446 cgggtatgtctagactgttcccaggcctcctacaaacattgggcctcttgtggcaggggacatggctatgaccttcatggagtttgctctacatgtcctc 180347  T
Q  200 agccagcaggagaggggtgatct 222  Q
    |||||||||||||||||||||||    
T  180346 agccagcaggagaggggtgatct 180324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 4e-38; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 12627421 - 12627641
Alignment:
Q  1 acattacgtcctttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagta 100  Q
    |||| ||| ||||| |||||||||| | |||||||||||||||||||||||||||| ||| || |||  ||||||||||| |||||||| ||| ||||||    
T  12627421 acatgacgcccttttaggacatatggtggtactctagatggatcatggccggcaaagacaggatggttcgtcacttgccagagtgggttcttatgcagta 12627520  T
Q  101 cgagtatgtctagactattcccaggcctcctacagacattgggcctcttacggcaggggacgtagctatggccttcgcagag-tttctctacatgccctc 199  Q
    |  ||||| | ||||| |||||||||||||||||||||||||| || || || ||| ||  || ||||||||||||   ||| |||||||||||| ||||    
T  12627521 caggtatgcccagactgttcccaggcctcctacagacattgggactgttgcgccagaggcggtggctatggccttcatggagttttctctacatgtcctc 12627620  T
Q  200 agccagcaggagaggggtgat 220  Q
    ||||| ||  |||||||||||    
T  12627621 agccaacaacagaggggtgat 12627641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 1327067 - 1326840
Alignment:
Q  1 acattacgtcctttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagta 100  Q
    |||||||  |||||||||||||||| | ||||||  |||||||||||||| ||| | ||||||||||  ||||||||||| |  ||| | ||||||||||    
T  1327067 acattacaccctttcaggacatatgttggtactccggatggatcatggcctgcagagacaagagggtccgtcacttgccagaacgggattttaggcagta 1326968  T
Q  101 cgagtatgtctagactattcccaggcctcctacagacattgggcctcttacggcaggggacgtagctatggccttcgcagagttt-ctctacatgccctc 199  Q
     | ||||||| | | | ||| || ||||||||||||||||||||||||  || ||||||| || | || |||||||   |||||| ||||||||| ||||    
T  1326967 tgggtatgtccaaattgttcacatgcctcctacagacattgggcctctggcgccaggggaggtggttacggccttcatggagtttgctctacatgtcctc 1326868  T
Q  200 agccagcaggagaggggtgatctagttt 227  Q
    ||||| ||||||||||||||||| ||||    
T  1326867 agccaacaggagaggggtgatctggttt 1326840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 141
Target Start/End: Original strand, 38457493 - 38457624
Alignment:
Q  10 cctttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagtacgagtatgt 109  Q
    |||||||||||||||||| ||||||  ||||||||||||||||||   ||| || |||  ||||||||||| ||| |||| |||||||||||| |||| |    
T  38457493 cctttcaggacatatgctggtactccggatggatcatggccggcagcgacatgatggtccgtcacttgccagagttggttcttaggcagtacgggtatat 38457592  T
Q  110 ctagactattcccaggcctcctacagacattg 141  Q
      |||||||||||||  |||||||||||||||    
T  38457593 tcagactattcccagcgctcctacagacattg 38457624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 6e-31; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 37 - 220
Target Start/End: Original strand, 26653528 - 26653712
Alignment:
Q  37 gatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagtacgagtatgtctagactattcccaggcctcctacaga 136  Q
    |||||||||||||||||||  || ||||||| |||||||||||| |  ||||| |||||||||||| ||||||| ||||||||||||| ||| ||||| |    
T  26653528 gatggatcatggccggcaatgactagagggtctgtcacttgccagaacgggttcttaggcagtacgggtatgtccagactattcccagaccttctacata 26653627  T
Q  137 cattgggcctcttacggcaggggacgtagctatggccttcgcagagttt-ctctacatgccctcagccagcaggagaggggtgat 220  Q
    ||||||||||||| | | ||  ||||| || ||| ||||    |||||| ||||||||| ||||| |||||||||||||||||||    
T  26653628 cattgggcctcttgcagtagatgacgtggcaatgaccttgatggagtttgctctacatgtcctcaaccagcaggagaggggtgat 26653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 37 - 220
Target Start/End: Original strand, 26925113 - 26925297
Alignment:
Q  37 gatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagtacgagtatgtctagactattcccaggcctcctacaga 136  Q
    |||||||||||||||||||  || ||||||| |||||||||||| |  ||||| |||||||||||| ||||||| ||||||||||||| ||| ||||| |    
T  26925113 gatggatcatggccggcaatgactagagggtctgtcacttgccagaacgggttcttaggcagtacgggtatgtccagactattcccagaccttctacata 26925212  T
Q  137 cattgggcctcttacggcaggggacgtagctatggccttcgcagagttt-ctctacatgccctcagccagcaggagaggggtgat 220  Q
    ||||||||||||| | | ||  ||||| || ||| ||||    |||||| ||||||||| ||||| |||||||||||||||||||    
T  26925213 cattgggcctcttgcagtagatgacgtggcaatgaccttgatggagtttgctctacatgtcctcaaccagcaggagaggggtgat 26925297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 11 - 217
Target Start/End: Original strand, 13274093 - 13274300
Alignment:
Q  11 ctttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagtacgagtatgtc 110  Q
    |||| |||||||||||| |||||| |||||||||||||||||||   ||| ||  ||  ||||||||||| || ||||| |||||||||||| |||||||    
T  13274093 cttttaggacatatgctggtactccagatggatcatggccggcagcgacaggattgtccgtcacttgccagagcgggttcttaggcagtacgggtatgtc 13274192  T
Q  111 tagactattcccaggcctcctacagacattgggcctcttacggcaggggacgtagctatggccttcgcagag-tttctctacatgccctcagccagcagg 209  Q
     |||||||||||||| ||||||||| ||||| || | || |||  |  ||||| ||   ||||||| ||||| |||||||||||| ||||||||| ||||    
T  13274193 cagactattcccagggctcctacagccattgagcttattgcggtggatgacgtggcctaggccttcacagagttttctctacatgtcctcagccatcagg 13274292  T
Q  210 agaggggt 217  Q
    | ||||||    
T  13274293 ataggggt 13274300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 2742997 - 2743137
Alignment:
Q  1 acattacgtcctttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagta 100  Q
    |||| ||| |||||||||||||||||| ||||||  ||||||||||| ||||||   ||| || |||   ||||||| || || ||||| ||||| ||||    
T  2742997 acatcacgccctttcaggacatatgctggtactccggatggatcatgaccggcagcgacaggatggtccatcacttgtcagagcgggttcttaggaagta 2743096  T
Q  101 cgagtatgtctagactattcccaggcctcctacagacattg 141  Q
    || ||||||| | ||||||| |||| |||||||||||||||    
T  2743097 cgggtatgtccaaactattctcagggctcctacagacattg 2743137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 21101423 - 21101479
Alignment:
Q  85 gggttattaggcagtacgagtatgtctagactattcccaggcctcctacagacattg 141  Q
    ||||| |||||||||||| ||||||| |||||||||| ||| |||||||||||||||    
T  21101423 gggttcttaggcagtacgtgtatgtccagactattcctagggctcctacagacattg 21101479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 26653769 - 26653833
Alignment:
Q  230 tagagtatcacatcctattatgaacctccatgcgtccattcctgactacacagttgatgtccatc 294  Q
    ||||||||||||||||||| |||||| || ||   |||||||||||||||||||||||| |||||    
T  26653769 tagagtatcacatcctattgtgaacccccctgtagccattcctgactacacagttgatgcccatc 26653833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 26925354 - 26925418
Alignment:
Q  230 tagagtatcacatcctattatgaacctccatgcgtccattcctgactacacagttgatgtccatc 294  Q
    ||||||||||||||||||| |||||| || ||   |||||||||||||||||||||||| |||||    
T  26925354 tagagtatcacatcctattgtgaacccccctgtagccattcctgactacacagttgatgcccatc 26925418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 24209332 - 24209211
Alignment:
Q  12 tttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagtacgagtatgtct 111  Q
    |||| ||||||||||| ||||||  ||||||||||| ||| |||| ||| || |    ||||||||||| || ||||| | ||||||||||| |||| ||    
T  24209332 tttcgggacatatgctggtactccggatggatcatgaccgacaaagacaggatgtgccgtcacttgccagagcgggttctgaggcagtacgactatgcct 24209233  T
Q  112 agactattcccaggcctcctac 133  Q
    |||| |||| ||| ||||||||    
T  24209232 agaccattcacagacctcctac 24209211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 285
Target Start/End: Original strand, 21101616 - 21101672
Alignment:
Q  230 tagagtatcacatcctattatgaacctccat-gcgtccattcctgactacacagttg 285  Q
    ||||||||| ||||||||| |||||| || | ||| |||||||||||||||||||||    
T  21101616 tagagtatcgcatcctattgtgaaccccccttgcggccattcctgactacacagttg 21101672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 37227947 - 37227721
Alignment:
Q  1 acattacgtcctttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagta 100  Q
    |||| ||| ||||| |||||||||||||||||||  ||||||||||||||| ||   ||| || |||   |||||||||| || ||||| ||||||||||    
T  37227947 acatcacgcccttttaggacatatgctagtactccggatggatcatggccgacatcgacaggatggtccctcacttgccagagcgggttcttaggcagta 37227848  T
Q  101 cgagtatgtctagactattcccaggcctcctacagacattgggcctcttacggcaggggacgtagctatggccttcgcagagttt-ctctacatgccctc 199  Q
    || ||||||| |||||||||||||| ||||||||||||||| || | || |||| |  ||||| ||   ||||||| | |||||| ||||||||| ||||    
T  37227847 cgggtatgtccagactattcccagggctcctacagacattgagcttattgcggcggatgacgtggcccaggccttcacggagtttgctctacatgtcctc 37227748  T
Q  200 agccagcaggagaggggtgatctagtt 226  Q
    ||||| || || |||||| ||| ||||    
T  37227747 agccatcaagataggggtcatccagtt 37227721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 156
Target Start/End: Original strand, 14096700 - 14096846
Alignment:
Q  10 cctttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagtacgagtatgt 109  Q
    |||||||||||||| |||||||||| |||||||||||||||| ||   |||  | |||  ||||||||||| || || || |||||||||||  ||||||    
T  14096700 cctttcaggacataagctagtactccagatggatcatggccgacagcgacataatggtccgtcacttgccagagcggtttcttaggcagtacaggtatgt 14096799  T
Q  110 ctagactattcccaggcctcctacagacattgggcctcttacggcag 156  Q
    | |||||||||||  ||||||||||||||||| || |||| ||||||    
T  14096800 ccagactattcccttgcctcctacagacattgagcttcttgcggcag 14096846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 277
Target Start/End: Complemental strand, 37227670 - 37227623
Alignment:
Q  230 tagagtatcacatcctattatgaacctccatgcgtccattcctgacta 277  Q
    ||||||||||||||||||| |||||| || |||| |||||||||||||    
T  37227670 tagagtatcacatcctattgtgaacccccctgcggccattcctgacta 37227623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 8e-27; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 10 - 226
Target Start/End: Complemental strand, 31117103 - 31116886
Alignment:
Q  10 cctttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagtacgagtatgt 109  Q
    |||||||||| ||||||| |||||   ||||||||||||||| || | | | || ||| |||||||||||| ||| |||| |||||||||||| ||||||    
T  31117103 cctttcaggatatatgctggtacttcggatggatcatggccgacagagataggatggtctgtcacttgccagagtcggttcttaggcagtacgggtatgt 31117004  T
Q  110 ctagactattcccaggcctcctacagacattgggcctcttacggcaggggacgtagctatggccttcgcagagttt-ctctacatgccctcagccagcag 208  Q
    | ||||    |||||||||||||||||||||  ||||||||||||||  ||||| ||   | |||||  ||||||| ||||||||| ||||||||| |||    
T  31117003 ccagacacggcccaggcctcctacagacattaagcctcttacggcagatgacgtggcccagaccttcatagagtttgctctacatgtcctcagccatcag 31116904  T
Q  209 gagaggggtgatctagtt 226  Q
     |||||||| ||| ||||    
T  31116903 cagaggggttatccagtt 31116886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 28035647 - 28035766
Alignment:
Q  1 acattacgtcctttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagta 100  Q
    |||| ||| ||||||| |||||||||| ||||||  ||| ||||||||||||||   ||| || |||  ||||||||| | || ||||| ||||||||||    
T  28035647 acatcacgccctttcaagacatatgctggtactccggatagatcatggccggcagcgacatgatggtccgtcacttgctagagcgggttcttaggcagta 28035746  T
Q  101 cgagtatgtctagactattc 120  Q
     | ||||||| |||||||||    
T  28035747 ggggtatgtccagactattc 28035766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 277
Target Start/End: Original strand, 28035925 - 28035972
Alignment:
Q  230 tagagtatcacatcctattatgaacctccatgcgtccattcctgacta 277  Q
    ||||||||||||||||||| |||||| ||||||| |||||||||||||    
T  28035925 tagagtatcacatcctattgtgaacccccatgcggccattcctgacta 28035972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 288
Target Start/End: Complemental strand, 31116835 - 31116777
Alignment:
Q  230 tagagtatcacatcctattatgaacctccatgcgtccattcctgactacacagttgatg 288  Q
    ||||||||||||||||||| |||||| || |||| |||||||||||||| ||| |||||    
T  31116835 tagagtatcacatcctattgtgaacccccctgcggccattcctgactacgcagctgatg 31116777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 5e-25; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 10 - 132
Target Start/End: Original strand, 25147344 - 25147466
Alignment:
Q  10 cctttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagtacgagtatgt 109  Q
    |||||||||||||||||| ||||||  ||||||||||||||||||   ||| || ||| |||||||||||| || ||||| |||||||||||| ||||||    
T  25147344 cctttcaggacatatgctggtactccggatggatcatggccggcagcgacaggatggtctgtcacttgccagagcgggttcttaggcagtacgggtatgt 25147443  T
Q  110 ctagactattcccaggcctccta 132  Q
    | |||||||||||| | ||||||    
T  25147444 ccagactattcccatggctccta 25147466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 42705356 - 42705139
Alignment:
Q  1 acattacgtcctttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagta 100  Q
    |||| ||| |||||||||||||||| | ||||||  |||||||||||| |||||   ||| || |||  ||||||||||| || ||||| ||||||||||    
T  42705356 acatcacgccctttcaggacatatgttggtactccggatggatcatgggcggcagcgacatgaaggtccgtcacttgccagagcgggttcttaggcagta 42705257  T
Q  101 cgagtatgtctagactattcccaggcctcctacagacattgggcctcttacggcaggggacgtagctatggccttcgcagagttt-ctctacatgccctc 199  Q
    || | ||||| | |||||||||||| ||||||||||||||| || | || || |||  ||||| ||   ||||||| | |||||| ||||||||| ||||    
T  42705256 cgggcatgtccatactattcccagggctcctacagacattgagcttattgcgacagatgacgtggcccaggccttcacggagtttgctctacatgtcctc 42705157  T
Q  200 agccagcaggagaggggt 217  Q
    ||||| ||| ||||||||    
T  42705156 agccatcagcagaggggt 42705139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 39465348 - 39465486
Alignment:
Q  1 acattacgtcctttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagta 100  Q
    |||| ||| |||||||||||||||||||||||||  ||||||||||||||||||   ||| || |||  || |||||||| ||  |||| ||||||||||    
T  39465348 acatcacgccctttcaggacatatgctagtactccggatggatcatggccggcagcgacaggatggtccgtaacttgccagagccggttcttaggcagta 39465447  T
Q  101 cgagtatgtctagactattcccaggcctcctacagacattg 141  Q
     | |||||||  |||||||| |||| || ||||||||||||    
T  39465448 tgggtatgtc--gactattctcagggcttctacagacattg 39465486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 3681088 - 3681143
Alignment:
Q  222 tagttttgtagagtatcacatcctattatgaacctccatgcgtccattcctgacta 277  Q
    ||||||| |||||||||||||||||||||||||| || |||| |||||||||||||    
T  3681088 tagttttttagagtatcacatcctattatgaacccccctgcgaccattcctgacta 3681143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 277
Target Start/End: Original strand, 25147612 - 25147659
Alignment:
Q  230 tagagtatcacatcctattatgaacctccatgcgtccattcctgacta 277  Q
    ||||||||||||||||||| |||||| || |||| |||||||||||||    
T  25147612 tagagtatcacatcctattgtgaacccccctgcggccattcctgacta 25147659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 277
Target Start/End: Complemental strand, 32305637 - 32305590
Alignment:
Q  230 tagagtatcacatcctattatgaacctccatgcgtccattcctgacta 277  Q
    ||||||||||||||||||| |||||| ||||| | |||||||||||||    
T  32305637 tagagtatcacatcctattgtgaacccccatgtggccattcctgacta 32305590  T

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Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 277
Target Start/End: Original strand, 39465623 - 39465670
Alignment:
Q  230 tagagtatcacatcctattatgaacctccatgcgtccattcctgacta 277  Q
    ||||||||||||||||||| |||||| || |||| |||||||||||||    
T  39465623 tagagtatcacatcctattgtgaacccccctgcggccattcctgacta 39465670  T

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Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 32307986 - 32307880
Alignment:
Q  1 acattacgtcctttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagta 100  Q
    |||| ||| ||||| |||||||||||| ||||||  ||||||||||||||| ||   ||| || |||  ||||||||||  || ||||| ||||||||||    
T  32307986 acatcacgccctttgaggacatatgctggtactccggatggatcatggccgacagcgacaggatggtccgtcacttgcctgagcgggttcttaggcagta 32307887  T
Q  101 cgagtat 107  Q
    || ||||    
T  32307886 cgggtat 32307880  T

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Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 3680825 - 3680918
Alignment:
Q  1 acattacgtcctttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattag 94  Q
    |||| ||| ||||| |||||| || |||||||||  ||||||||||||||||||   |||||| |||  ||||||||||| || ||||| ||||    
T  3680825 acatcacgccctttgaggacacatactagtactccggatggatcatggccggcagcgacaagatggtccgtcacttgccagagcgggttcttag 3680918  T

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Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 141
Target Start/End: Complemental strand, 32305811 - 32305774
Alignment:
Q  104 gtatgtctagactattcccaggcctcctacagacattg 141  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  32305811 gtatgtccagactattcccagggctcctacagacattg 32305774  T

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Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 274
Target Start/End: Complemental strand, 42705079 - 42705035
Alignment:
Q  230 tagagtatcacatcctattatgaacctccatgcgtccattcctga 274  Q
    ||||||||||||||||||| |||||| || |||| ||||||||||    
T  42705079 tagagtatcacatcctattgtgaacccccctgcggccattcctga 42705035  T

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Target: scaffold0251 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 10 - 221
Target Start/End: Complemental strand, 17192 - 16977
Alignment:
Q  10 cctttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagtacgagtatgt 109  Q
    |||||||||||||||||| ||||||| |||||||||||||| |||   ||| || |||  ||||||| ||| || ||||| ||||| |||||| ||||||    
T  17192 cctttcaggacatatgctggtactctggatggatcatggccagcagcgacaggatggtccgtcactttccagagcgggttgttaggtagtacgggtatgt 17093  T
Q  110 ctagactattcccaggcctcctacagacattgggcctcttacggcaggggacgtag-cta--tggccttcgcagagttt-ctctacatgccctcagccag 205  Q
    | |||||||||| ||| ||||||||||||||  || | || ||||||  ||| | | |||  || ||||| |||||||| ||||||||| |||||||||     
T  17092 ccagactattccgagggctcctacagacatttagcttattgcggcagatgacatggcctaggtgcccttcacagagtttgctctacatgtcctcagccat 16993  T
Q  206 caggagaggggtgatc 221  Q
    ||| ||||||||||||    
T  16992 cagtagaggggtgatc 16977  T

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Target: scaffold0251; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 277
Target Start/End: Complemental strand, 16922 - 16875
Alignment:
Q  230 tagagtatcacatcctattatgaacctccatgcgtccattcctgacta 277  Q
    ||||||||||||||||||| |||||| || |||| |||||||||||||    
T  16922 tagagtatcacatcctattgtgaacccccctgcggccattcctgacta 16875  T

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Target: scaffold0408 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0408
Description:

Target: scaffold0408; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 156
Target Start/End: Original strand, 7042 - 7188
Alignment:
Q  10 cctttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagtacgagtatgt 109  Q
    |||||||||||||| |||||||||| |||||||||||||||| ||   |||  | |||  ||||||||||| || || || |||||||||||  ||||||    
T  7042 cctttcaggacataagctagtactccagatggatcatggccgacagcgacataatggtccgtcacttgccagagcggtttcttaggcagtacaggtatgt 7141  T
Q  110 ctagactattcccaggcctcctacagacattgggcctcttacggcag 156  Q
    | |||||||||||  ||||||||||||||||| || |||| ||||||    
T  7142 ccagactattcccttgcctcctacagacattgagcttcttgcggcag 7188  T

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Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 6285954 - 6285814
Alignment:
Q  1 acattacgtcctttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagta 100  Q
    |||| ||| ||||| |||||||||||| |||||| ||||||||||||||  |||   | | || |||  |||||||| || || ||||| ||||||||||    
T  6285954 acatcacgccctttgaggacatatgctggtactccagatggatcatggctagcagcgataggatggtccgtcacttggcagagcgggttcttaggcagta 6285855  T
Q  101 cgagtatgtctagactattcccaggcctcctacagacattg 141  Q
    || ||||||| |||||||||||||| |||||| ||||||||    
T  6285854 cgggtatgtccagactattcccagggctcctatagacattg 6285814  T

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Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 37 - 154
Target Start/End: Original strand, 35014337 - 35014454
Alignment:
Q  37 gatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagtacgagtatgtctagactattcccaggcctcctacaga 136  Q
    |||||||||||| ||||||  ||| || |||  ||||||||||| || ||||| |||||||||||| ||||||| ||||||||| |||| ||| |||| |    
T  35014337 gatggatcatggtcggcaacgacaggatggtccgtcacttgccagagcgggttcttaggcagtacgggtatgtccagactattcacagggctcgtacata 35014436  T
Q  137 cattgggcctcttacggc 154  Q
    ||||| || | |||||||    
T  35014437 cattgagcttattacggc 35014454  T

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Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 102
Target Start/End: Original strand, 2029728 - 2029818
Alignment:
Q  12 tttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagtacg 102  Q
    ||||||||| | |||| ||| ||| |||||||||||||||||||| | |||| |||  ||||||||||| || ||||| | ||||||||||    
T  2029728 tttcaggacgtgtgctggtattctggatggatcatggccggcaaacagaagatggtgcgtcacttgccagagcgggttctgaggcagtacg 2029818  T

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Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 141
Target Start/End: Complemental strand, 257416 - 257345
Alignment:
Q  70 gtcacttgccatagtgggttattaggcagtacgagtatgtctagactattcccaggcctcctacagacattg 141  Q
    ||||||||||| || ||||| ||||| |||||| ||||||| ||||||||| |||| |||| ||||||||||    
T  257416 gtcacttgccagagcgggttcttaggtagtacgggtatgtccagactattctcagggctcccacagacattg 257345  T

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Target: scaffold0010 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 32451 - 32353
Alignment:
Q  12 tttcaggacatatgctagtactctagatggatcatggccggcaaatacaagagggtatgtcacttgccatagtgggttattaggcagtacgagtatgtc 110  Q
    |||||||||||||||| |||||| |||||||||||||||  || | ||| || |||  ||||||||||| || ||||| ||||| |||||  |||||||    
T  32451 tttcaggacatatgctggtactccagatggatcatggccaacagagacatgatggtccgtcacttgccagagcgggttcttaggtagtacaggtatgtc 32353  T

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