View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10194_low_35 (Length: 216)

Name: NF10194_low_35
Description: NF10194
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10194_low_35
NF10194_low_35
[»] chr8 (1 HSPs)
chr8 (15-198)||(30403747-30403931)


Alignment Details
Target: chr8 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 15 - 198
Target Start/End: Original strand, 30403747 - 30403931
Alignment:
Q  15 aagaatgttaaggaggaggttag-gagggttatcttttggttactttctttgaaggccatcacattgtttcccccaaaatataattttggcatattgcag 113  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30403747 aagaatgttaaggaggaggttagtgagggttatcttttggttactttctttgaaggccatcacattgtttcccccaaaatataattttggaatattgcag 30403846  T
Q  114 atgattgtgcctgacaaaagggtgcttgtgcatgttgtatttctgatgttgatattctaacagacgtttaaatatattacgagtt 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||    
T  30403847 atgattgtgcctgacaaaagggtgcttgtgcatgttgtatttcagatgttgatattctaacagatgtttaaatatattatgagtt 30403931  T

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