View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10195_low_12 (Length: 265)
Name: NF10195_low_12
Description: NF10195
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10195_low_12 |
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Alignment Details
Target: chr3 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 18 - 255
Target Start/End: Original strand, 52290079 - 52290316
Alignment:
| Q |
18 |
ctatttgcgctagttaaatctctattctcctttttatcactaaaatttgagatagccttaactttactgtccatagtactagacgaatggaccttctcgt |
117 |
Q |
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| T |
52290079 |
ctatttgcgctagttaaatctttattctcctttttatcactaaaatttgagatagccttaactttactgtccatagtactagacgaatggaccttctcgt |
52290178 |
T |
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| Q |
118 |
cttccgagaatcttgctaagcaagaaatcaacgattcactttcctcttcattgattttatcaattagaaactcacttcttcttgaaggaacgtcggatgt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52290179 |
cttccgagaatcttgctaagcaagaaatcaacgattcactttcctcttcattgattttatcaattagaaactcacttcttcttgaaggaacgtcggatgt |
52290278 |
T |
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| Q |
218 |
acttttccggcctttggatttcactttcttgacctttg |
255 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
52290279 |
acttttccggcctttggatttcactttcttgacctttg |
52290316 |
T |
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