View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10196_high_4 (Length: 369)
Name: NF10196_high_4
Description: NF10196
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF10196_high_4 |
 |  |
|
[»] scaffold0596 (1 HSPs) |
 |  |  |
|
[»] scaffold0035 (1 HSPs) |
 |  |  |
|
[»] scaffold0045 (1 HSPs) |
 |  |  |
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[»] scaffold0096 (1 HSPs) |
 |  |  |
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[»] scaffold0157 (1 HSPs) |
 |  |  |
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[»] scaffold0475 (1 HSPs) |
 |  |  |
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Alignment Details
Target: chr2 (Bit Score: 226; Significance: 1e-124; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 81 - 354
Target Start/End: Complemental strand, 23349102 - 23348826
Alignment:
Q |
81 |
aatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctc |
180 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
23349102 |
aatcatacttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctc |
23349003 |
T |
 |
Q |
181 |
atcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcat |
278 |
Q |
|
|
||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |
|
|
T |
23349002 |
atcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcat |
23348903 |
T |
 |
Q |
279 |
taattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctctt |
354 |
Q |
|
|
|||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
T |
23348902 |
taattatcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctctt |
23348826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 82 - 354
Target Start/End: Complemental strand, 18355434 - 18355159
Alignment:
Q |
82 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
181 |
Q |
|
|
||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||| |
|
|
T |
18355434 |
atcatacttatatttaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggtcgttggatctca |
18355335 |
T |
 |
Q |
182 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
279 |
Q |
|
|
|||||||||||| ||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
T |
18355334 |
tcatttggctaagcatgcatctcatcctttaatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcatt |
18355235 |
T |
 |
Q |
280 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctctt |
354 |
Q |
|
|
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
T |
18355234 |
aattatcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctctt |
18355159 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 93 - 354
Target Start/End: Original strand, 12741699 - 12741963
Alignment:
Q |
93 |
atctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctcatcatttggcta |
192 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
T |
12741699 |
atctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaaaggaggccgttggatctcatcatttggcta |
12741798 |
T |
 |
Q |
193 |
accatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcattaattatcctcc |
290 |
Q |
|
|
| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |
|
|
T |
12741799 |
agcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatcctcc |
12741898 |
T |
 |
Q |
291 |
aattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctctt |
354 |
Q |
|
|
|||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
T |
12741899 |
aattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctctt |
12741963 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 82 - 354
Target Start/End: Complemental strand, 10329013 - 10328743
Alignment:
Q |
82 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
181 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| || |||||||||||||||||||||||||| |
|
|
T |
10329013 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaattgttttggttctaaaacaagggaggccgttggatctca |
10328914 |
T |
 |
Q |
182 |
tcatttggctaaccatgcatctcat-catttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcat |
278 |
Q |
|
|
|||||||||||| |||||||||||| | |||||||||||| ||||||||||| ||||||| |||||||| ||||||||||| ||||||||||| |
|
|
T |
10328913 |
tcatttggctaagcatgcatctcatccttttgatctaatctgagtcaaatttgaaaatttg------atttcctatgcacttatccaagttttgactcat |
10328820 |
T |
 |
Q |
279 |
taattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctctt |
354 |
Q |
|
|
|||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
T |
10328819 |
taattatcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctctt |
10328743 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 80 - 255
Target Start/End: Complemental strand, 1616037 - 1615863
Alignment:
Q |
80 |
caatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatct |
179 |
Q |
|
|
||||||| |||||||| ||||||||||||||||| |||||| ||| || | |||| ||||||||||| |||||||| |||||||| ||||||||| |
|
|
T |
1616037 |
caatcatccttatatccaatctttgttaacattgttaatgactttgtaaccattaaatctaaatggtttttgctccaaa-caagggagatcgttggatcg |
1615939 |
T |
 |
Q |
180 |
catcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta |
255 |
Q |
|
|
|||||||||||||| ||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||| |
|
|
T |
1615938 |
catcatttggctaagcatgcatctcatcctttgatctaatttgagtcaaactttcaaatttgatgtatatttccta |
1615863 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 83 - 255
Target Start/End: Original strand, 24454516 - 24454688
Alignment:
Q |
83 |
tcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctcat |
182 |
Q |
|
|
|||||||||||||||||||| ||||||||||||| |||||||| |||||| ||||| ||| ||| ||||| ||||| |||||||||||||||| |
|
|
T |
24454516 |
tcatacttatatctaatcttaattaacattgctaagaccattgcaaatcctaaacctaaattttttaggcgccaaa-caaggagggccgttggatctcat |
24454614 |
T |
 |
Q |
183 |
catttggctaaccatgcatctcatcatttgatctaatccga-gtcaaattttcaaatttgatgtatatttccta |
255 |
Q |
|
|
||||||||| ||| ||||||||| |||||||||||| || ||||| ||||||||||||||| | ||||||| |
|
|
T |
24454615 |
catttggcttgacattcatctcatcctttgatctaatctgacttcaaactttcaaatttgatgtctttttccta |
24454688 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 82 - 354
Target Start/End: Complemental strand, 43071503 - 43071228
Alignment:
Q |
82 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
181 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
43071503 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctca |
43071404 |
T |
 |
Q |
182 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
279 |
Q |
|
|
|||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
T |
43071403 |
tcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcatt |
43071304 |
T |
 |
Q |
280 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctctt |
354 |
Q |
|
|
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
T |
43071303 |
aattatcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctctt |
43071228 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 81 - 354
Target Start/End: Original strand, 1262087 - 1262364
Alignment:
Q |
81 |
aatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctc |
180 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||| |
|
|
T |
1262087 |
aatcatacttatatctaatctttgttaacattgctaatgactttgcaaaccctaaacctaaatggttttggctccaaaacaagggaagccgttggatctc |
1262186 |
T |
 |
Q |
181 |
atcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcat |
278 |
Q |
|
|
||||||||||||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||| |
|
|
T |
1262187 |
atcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcat |
1262286 |
T |
 |
Q |
279 |
taattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca--ttttaagttctctt |
354 |
Q |
|
|
|||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||| |
|
|
T |
1262287 |
taattatcctccaattcccaaattgactccacacttatcgatgttcacctctttctccttcattttttaagttctctt |
1262364 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 81 - 354
Target Start/End: Complemental strand, 48849929 - 48849652
Alignment:
Q |
81 |
aatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctc |
180 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||||||||||||||| |||||||||| |
|
|
T |
48849929 |
aatcatacttatatctaatctttgttaacattgctaatgactttgtaaatcctaaacctaaatggttttggctccaaaacaagggattttgttggatctc |
48849830 |
T |
 |
Q |
181 |
atcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcat |
278 |
Q |
|
|
||||||||||||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||| |
|
|
T |
48849829 |
atcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcat |
48849730 |
T |
 |
Q |
279 |
taattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca--ttttaagttctctt |
354 |
Q |
|
|
||||||||||| |||||| |||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||| |
|
|
T |
48849729 |
taattatcctcaaattcccaaattgactccacacttatcgatgttcacctctttctccttcattttttaagttctctt |
48849652 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 81 - 344
Target Start/End: Complemental strand, 26910103 - 26909842
Alignment:
Q |
81 |
aatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctc |
180 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| | |||||||| |||||| ||||||| ||||||||||||||||||||| || |||||||| |
|
|
T |
26910103 |
aatcatacttatatctaatctttgttaacattgctaataactttgcaaaccctaaacctaaatggatttggctccaaaacaagggagaccattggatctt |
26910004 |
T |
 |
Q |
181 |
atcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcat |
278 |
Q |
|
|
||||||||||||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||| ||| ||||||||| |
|
|
T |
26910003 |
atcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttattcaagttttgactc-- |
26909906 |
T |
 |
Q |
279 |
taattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttcatttt |
344 |
Q |
|
|
|||||||||||||||| | |||||||||||||||||| ||| |||||| ||||||||||||||| |
|
|
T |
26909905 |
--attatcctccaattcccagattgactccacacttatccatgcccacctttttctccttcatttt |
26909842 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 22007347 - 22007416
Alignment:
Q |
89 |
ttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaa |
158 |
Q |
|
|
||||||||||| |||||||||||||||||||| || ||||| ||||| |||||||||||||||||||| |
|
|
T |
22007347 |
ttatatctaatttttgttaacattgctaatgactttacaaaccctaaatctaaatggttttggctccaaa |
22007416 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 222; Significance: 1e-122; HSPs: 10)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 77 - 354
Target Start/End: Original strand, 9043797 - 9044077
Alignment:
Q |
77 |
aagcaatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttgga |
176 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
9043797 |
aagcaatcatacttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttgga |
9043896 |
T |
 |
Q |
177 |
tctcatcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgac |
274 |
Q |
|
|
||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||| || |||||||| ||||||| |
|
|
T |
9043897 |
tctcatcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaatttttaaatttgatgtatatttcctatgcatttatccaagttttgac |
9043996 |
T |
 |
Q |
275 |
tcattaattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctctt |
354 |
Q |
|
|
|||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
T |
9043997 |
tcattaattatcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctctt |
9044077 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 82 - 354
Target Start/End: Complemental strand, 7473610 - 7473335
Alignment:
Q |
82 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
181 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
7473610 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctca |
7473511 |
T |
 |
Q |
182 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
279 |
Q |
|
|
|||||| ||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
T |
7473510 |
tcatttagctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcatt |
7473411 |
T |
 |
Q |
280 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctctt |
354 |
Q |
|
|
| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
T |
7473410 |
agttatcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctctt |
7473335 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 83 - 354
Target Start/End: Complemental strand, 30442667 - 30442393
Alignment:
Q |
83 |
tcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctcat |
182 |
Q |
|
|
|||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
30442667 |
tcatgcttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctcat |
30442568 |
T |
 |
Q |
183 |
catttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatta |
280 |
Q |
|
|
||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||| |
|
|
T |
30442567 |
catttggctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttttccaagttttgactcatta |
30442468 |
T |
 |
Q |
281 |
attatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttcatttt-aagttctctt |
354 |
Q |
|
|
|||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |
|
|
T |
30442467 |
attatcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcattttaaagttctctt |
30442393 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 82 - 276
Target Start/End: Complemental strand, 22009649 - 22009453
Alignment:
Q |
82 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
181 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
22009649 |
atcatacttatatctaatctttgttaacattgctaatgaatttgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctca |
22009550 |
T |
 |
Q |
182 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactc |
276 |
Q |
|
|
|||||||||||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| | ||||||||| ||||||||| |
|
|
T |
22009549 |
tcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgctcttatccaagttttgactc |
22009453 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 93 - 179
Target Start/End: Complemental strand, 26841074 - 26840988
Alignment:
Q |
93 |
atctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatct |
179 |
Q |
|
|
|||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||| |
|
|
T |
26841074 |
atctaatctttgttaacattgctaatgattttgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatct |
26840988 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 82 - 158
Target Start/End: Complemental strand, 19085498 - 19085422
Alignment:
Q |
82 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaa |
158 |
Q |
|
|
||||||||||||| ||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||| |
|
|
T |
19085498 |
atcatacttatatataatctttgttaacattgctaatgactttgcaaaccctaaacctaaatggttttggctccaaa |
19085422 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 88 - 219
Target Start/End: Complemental strand, 22004571 - 22004441
Alignment:
Q |
88 |
cttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctcatcattt |
187 |
Q |
|
|
||||||||||||||||||||||||||||||||| |||||||| |||||| || || |||| ||| || || ||||| | ||||||||||||||||||| |
|
|
T |
22004571 |
cttatatctaatctttgttaacattgctaatgattttgcaaaccctaaacctagatagtttaggcgcc-aatcaaggtggtccgttggatctcatcattt |
22004473 |
T |
 |
Q |
188 |
ggctaaccatgcatctcatcatttgatctaat |
219 |
Q |
|
|
|||| | ||| ||| ||||| ||||||||||| |
|
|
T |
22004472 |
ggctcagcattcatatcatcctttgatctaat |
22004441 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 285 - 344
Target Start/End: Complemental strand, 19085241 - 19085182
Alignment:
Q |
285 |
tcctccaattcctaaattgactccacacttatctatgtccacctctttctccttcatttt |
344 |
Q |
|
|
|||||||||||| | |||||||||||||||||| || ||||||||||||||| |||||| |
|
|
T |
19085241 |
tcctccaattcccatattgactccacacttatcgatacccacctctttctcctccatttt |
19085182 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 22009455 - 22009398
Alignment:
Q |
287 |
ctccaattcctaaattgactccacacttatctatgtccacctctttctccttcatttt |
344 |
Q |
|
|
|||||||||| |||||||||||||||||||| ||| | |||| |||||||||| |||| |
|
|
T |
22009455 |
ctccaattcccaaattgactccacacttatcgatgccaacctttttctccttcctttt |
22009398 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 118
Target Start/End: Complemental strand, 30463172 - 30463136
Alignment:
Q |
82 |
atcatacttatatctaatctttgttaacattgctaat |
118 |
Q |
|
|
||||||||||||||||||||||||||||| ||||||| |
|
|
T |
30463172 |
atcatacttatatctaatctttgttaacaatgctaat |
30463136 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 12)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 82 - 344
Target Start/End: Complemental strand, 53973407 - 53973143
Alignment:
Q |
82 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
181 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
53973407 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaatcaagggaggccgttggatctca |
53973308 |
T |
 |
Q |
182 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
279 |
Q |
|
|
|||||||||||| | ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
T |
53973307 |
tcatttggctaagcctgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaaattttgactcatt |
53973208 |
T |
 |
Q |
280 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttcatttt |
344 |
Q |
|
|
|||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
T |
53973207 |
aattatcctccaattctcaaattgactccacacttatcgatgtccacctctttctccttcatttt |
53973143 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 89 - 344
Target Start/End: Complemental strand, 19882225 - 19881968
Alignment:
Q |
89 |
ttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
188 |
Q |
|
|
||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
T |
19882225 |
ttatatctaatctttgttaacattgctaatgaaattgtaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttg |
19882126 |
T |
 |
Q |
189 |
gctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcattaattatc |
286 |
Q |
|
|
||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
T |
19882125 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaaattttgactcattaattatc |
19882026 |
T |
 |
Q |
287 |
ctccaattcctaaattgactccacacttatctatgtccacctctttctccttcatttt |
344 |
Q |
|
|
|||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||| |
|
|
T |
19882025 |
ctccaattcccaaattgactccacatttatcgatgtccacctctttctccttcatttt |
19881968 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 81 - 354
Target Start/End: Original strand, 37982348 - 37982627
Alignment:
Q |
81 |
aatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctc |
180 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||| |
|
|
T |
37982348 |
aatcatacttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctc |
37982447 |
T |
 |
Q |
181 |
atcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--ca---cttatccaaattttgact |
275 |
Q |
|
|
||||||||||||| ||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||| || ||||||||| |||||||| |
|
|
T |
37982448 |
atcatttggctaagcatgcatctcatcctttaatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacgtcttatccaagttttgact |
37982547 |
T |
 |
Q |
276 |
cattaattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctctt |
354 |
Q |
|
|
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
T |
37982548 |
cattaattatcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctctt |
37982627 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 81 - 344
Target Start/End: Original strand, 31685076 - 31685341
Alignment:
Q |
81 |
aatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctc |
180 |
Q |
|
|
||||||||||||||||||||||| |||||||||||||||| |||||||| |||||| ||||||||||||||||||||| |||||||||||||| ||||| |
|
|
T |
31685076 |
aatcatacttatatctaatctttattaacattgctaatgactttgcaaaccctaaacctaaatggttttggctccaaaataagggaggccgttgaatctc |
31685175 |
T |
 |
Q |
181 |
atcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcat |
278 |
Q |
|
|
||||||||||||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||| ||| ||||||||||| |
|
|
T |
31685176 |
atcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttattcaagttttgactcat |
31685275 |
T |
 |
Q |
279 |
taattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttcatttt |
344 |
Q |
|
|
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
T |
31685276 |
taattatcctccaattctcaaattgactccacacttatcgatgtccacctctttctccttcatttt |
31685341 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 82 - 253
Target Start/End: Original strand, 17681767 - 17681938
Alignment:
Q |
82 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
181 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||||||||||| ||||||||| ||||||||||||||| |
|
|
T |
17681767 |
atcatacttatatctaatctttgttaacattgttaatgattttgcaaaccctaaacctaaatggttttggctcc-aaacaaggggggccgttggatctca |
17681865 |
T |
 |
Q |
182 |
tcatttggctaaccatgcatctcatcatttgatctaatc-cgagtcaaattttcaaatttgatgtatatttcc |
253 |
Q |
|
|
|||||||| ||| ||||||||||||| |||||||||||| |||||||||||| |||||| |||||||||||| |
|
|
T |
17681866 |
tcatttggttaagcatgcatctcatcctttgatctaatcttgagtcaaatttttaaatttaatgtatatttcc |
17681938 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 82 - 219
Target Start/End: Complemental strand, 12538756 - 12538620
Alignment:
Q |
82 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
181 |
Q |
|
|
|||||||||||||||||||||||||||| || ||||||| |||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||| |
|
|
T |
12538756 |
atcatacttatatctaatctttgttaacctttctaatgattttgcaaaccctaaacctaaatggttttggctcc-aaacaagggaggccgttggatctca |
12538658 |
T |
 |
Q |
182 |
tcatttggctaaccatgcatctcatcatttgatctaat |
219 |
Q |
|
|
|||||||||||| |||||||| |||| ||||||||||| |
|
|
T |
12538657 |
tcatttggctaagcatgcatcacatcctttgatctaat |
12538620 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 82 - 225
Target Start/End: Original strand, 2549937 - 2550079
Alignment:
Q |
82 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
181 |
Q |
|
|
||||||||||||||||||||| |||||||||||||||| |||||||| |||||| |||||| |||||||||||||||||||||||||||||||||| | |
|
|
T |
2549937 |
atcatacttatatctaatcttaattaacattgctaatgactttgcaaaccctaaacctaaatgattttggctccaaaacaagggaggccgttggatct-a |
2550035 |
T |
 |
Q |
182 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagt |
225 |
Q |
|
|
|||||||||||| ||||||||||||| |||||| ||||| |||| |
|
|
T |
2550036 |
tcatttggctaagcatgcatctcatcctttgatttaatctgagt |
2550079 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 24762020 - 24761882
Alignment:
Q |
81 |
aatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctc |
180 |
Q |
|
|
|||||||||||||||||||| || |||||||||||||||| |||||||| |||||| |||||||||||||||||||||||| | | |||||||||||| |
|
|
T |
24762020 |
aatcatacttatatctaatccttcttaacattgctaatgactttgcaaaccctaaacctaaatggttttggctccaaaacaatgctgaccgttggatctc |
24761921 |
T |
 |
Q |
181 |
atcatttggctaaccatgcatctcatcatttgatctaat |
219 |
Q |
|
|
||||||||||| | ||||||||||||| ||||||||||| |
|
|
T |
24761920 |
atcatttggctcagcatgcatctcatcctttgatctaat |
24761882 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 82 - 219
Target Start/End: Original strand, 24815915 - 24816052
Alignment:
Q |
82 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
181 |
Q |
|
|
||||||||||||||||||| || |||||||||||||||| |||||||| |||||| |||||||||||||||||||||| | | ||||||||||||||| |
|
|
T |
24815915 |
atcatacttatatctaatccttcttaacattgctaatgactttgcaaaccctaaacctaaatggttttggctccaaaacgatgctggccgttggatctca |
24816014 |
T |
 |
Q |
182 |
tcatttggctaaccatgcatctcatcatttgatctaat |
219 |
Q |
|
|
|||||||||| | ||||||||||||| ||||||||||| |
|
|
T |
24816015 |
tcatttggctcagcatgcatctcatcctttgatctaat |
24816052 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 82 - 219
Target Start/End: Complemental strand, 53352882 - 53352745
Alignment:
Q |
82 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
181 |
Q |
|
|
||||||||||||||||||| || |||||||||||||||| ||||||||||||||| |||| ||||||||||||||||| | | | ||||||||||||| |
|
|
T |
53352882 |
atcatacttatatctaatccttcttaacattgctaatgactttgcaaactctaaacctaaacggttttggctccaaaacgatgctgaccgttggatctca |
53352783 |
T |
 |
Q |
182 |
tcatttggctaaccatgcatctcatcatttgatctaat |
219 |
Q |
|
|
|||||||||| | ||||||||||| |||||| |||| |
|
|
T |
53352782 |
tcatttggctcagtgtgcatctcatcctttgatttaat |
53352745 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 82 - 219
Target Start/End: Complemental strand, 53027873 - 53027736
Alignment:
Q |
82 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
181 |
Q |
|
|
||||||||||||||||||| || |||||| ||||||| | || ||||| |||||| |||||||||||| |||||||| | | | ||||||||||||| |
|
|
T |
53027873 |
atcatacttatatctaatccttcttaacactgctaataactttacaaaccctaaacctaaatggttttgactccaaaatgatgctgaccgttggatctca |
53027774 |
T |
 |
Q |
182 |
tcatttggctaaccatgcatctcatcatttgatctaat |
219 |
Q |
|
|
|||||||||| | ||||||||||||| ||||||||||| |
|
|
T |
53027773 |
tcatttggctcagcatgcatctcatcctttgatctaat |
53027736 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 110
Target Start/End: Complemental strand, 32015812 - 32015784
Alignment:
Q |
82 |
atcatacttatatctaatctttgttaaca |
110 |
Q |
|
|
||||||||||||||||||||||||||||| |
|
|
T |
32015812 |
atcatacttatatctaatctttgttaaca |
32015784 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0596 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: scaffold0596
Description:
Target: scaffold0596; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 82 - 354
Target Start/End: Original strand, 654 - 929
Alignment:
Q |
82 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
181 |
Q |
|
|
||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||| ||||||||||||||||||||| |
|
|
T |
654 |
atcatacttatatctgatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttgactccaaaataagggaggccgttggatctca |
753 |
T |
 |
Q |
182 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
279 |
Q |
|
|
|||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
T |
754 |
tcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaaattttgactcatt |
853 |
T |
 |
Q |
280 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctctt |
354 |
Q |
|
|
||||||| | ||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
T |
854 |
aattatcattcaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctctt |
929 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0035 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: scaffold0035
Description:
Target: scaffold0035; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 79 - 352
Target Start/End: Original strand, 35060 - 35336
Alignment:
Q |
79 |
gcaatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatc |
178 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||| |||||||| |
|
|
T |
35060 |
gcaatcatacttatatctaatctttgttaacattgctaatgactttgcaaaccctaaacctaaatggttttggctccaaaacaagggaggttgttggatc |
35159 |
T |
 |
Q |
179 |
tcatcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactc |
276 |
Q |
|
|
||||||||||||||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
T |
35160 |
tcatcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactc |
35259 |
T |
 |
Q |
277 |
attaattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctc |
352 |
Q |
|
|
|||||||||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||||| |||||||||||| |
|
|
T |
35260 |
attaattatcctccaattcccaaattaactccacacttatcgatgtccacctttttctccttcatttttaagttctc |
35336 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 198; Significance: 1e-108; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 89 - 354
Target Start/End: Complemental strand, 33045545 - 33045277
Alignment:
Q |
89 |
ttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
188 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
T |
33045545 |
ttatatctaatctttgttaacattgctaatgactttgcaaaccctaaacctaaatggttttggctccaaaataagggaggccgttggatctcatcatttg |
33045446 |
T |
 |
Q |
189 |
gctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcattaattatc |
286 |
Q |
|
|
| ||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |
|
|
T |
33045445 |
gttaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
33045346 |
T |
 |
Q |
287 |
ctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctctt |
354 |
Q |
|
|
|||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
T |
33045345 |
ctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctctt |
33045277 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 82 - 353
Target Start/End: Original strand, 10092512 - 10092772
Alignment:
Q |
82 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
181 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
10092512 |
atcatacttatatctaatctttgttaacattgttaatgactttgcaaaccctaaatctaaatggttttggctccaaaacaagggaggccgttggatctca |
10092611 |
T |
 |
Q |
182 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
279 |
Q |
|
|
|||||||||||| |||||||||||| || ||||| ||||||||||||||||||||||||| ||| ||||||| |||||| ||||| |
|
|
T |
10092612 |
tcatttggctaagcatgcatctcattctt--------------tcaaactttcaaatttgatgtatatttcctatgcacctatccaagttttgattcatt |
10092697 |
T |
 |
Q |
280 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctct |
353 |
Q |
|
|
| ||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |
|
|
T |
10092698 |
agttatcctccaatttccaaattgactccacacttatcgatgtccacctctttctccttcatttttaagttctct |
10092772 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 8976411 - 8976542
Alignment:
Q |
89 |
ttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
188 |
Q |
|
|
|||||||||||||||||||| ||||||||||| || |||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||| |||| |
|
|
T |
8976411 |
ttatatctaatctttgttaatattgctaatgactttacaaactctaaacctaaatggttttggctccaaaataagggagaccgttggatctcattattta |
8976510 |
T |
 |
Q |
189 |
gctaaccatgcatctcatcatttgatctaatc |
220 |
Q |
|
|
||||| ||||||||||||| |||||||||||| |
|
|
T |
8976511 |
gctaaacatgcatctcatcctttgatctaatc |
8976542 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 81 - 193
Target Start/End: Original strand, 3065697 - 3065808
Alignment:
Q |
81 |
aatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctc |
180 |
Q |
|
|
||||||||||||||||||||||||||||||| |||||||| |||||||| |||||| ||||||||||||||||| ||||||||||| |||||||||||| |
|
|
T |
3065697 |
aatcatacttatatctaatctttgttaacatggctaatgactttgcaaaccctaaacctaaatggttttggctcc-aaacaagggagaccgttggatctc |
3065795 |
T |
 |
Q |
181 |
atcatttggctaa |
193 |
Q |
|
|
||||||||||||| |
|
|
T |
3065796 |
atcatttggctaa |
3065808 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 81 - 158
Target Start/End: Original strand, 16246701 - 16246778
Alignment:
Q |
81 |
aatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaa |
158 |
Q |
|
|
||||||||||||||||||||||||| |||||||||||||| |||||||| |||| | |||||||||||||||||||| |
|
|
T |
16246701 |
aatcatacttatatctaatctttgtgaacattgctaatgactttgcaaaccctaatcctaaatggttttggctccaaa |
16246778 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 30908483 - 30908414
Alignment:
Q |
89 |
ttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaa |
158 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| |
|
|
T |
30908483 |
ttatatctaatctttgttaacattgctaatgactttgcaaaccctaaatctaaatggttttggctccaaa |
30908414 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 157
Target Start/End: Complemental strand, 4660295 - 4660222
Alignment:
Q |
83 |
tcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaa |
157 |
Q |
|
|
|||||||||||| ||||||||||||||||||||||||| |||||||| |||| | |||| | |||||||||||| |
|
|
T |
4660295 |
tcatacttatatataatctttgttaacattgctaatgactttgcaaaccctaaccctaaa-gtttttggctccaa |
4660222 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 344
Target Start/End: Complemental strand, 30908233 - 30908174
Alignment:
Q |
285 |
tcctccaattcctaaattgactccacacttatctatgtccacctctttctccttcatttt |
344 |
Q |
|
|
||||||||||| | |||||||||||||||||| || ||||||||||||||| |||||| |
|
|
T |
30908233 |
tcctccaattctcatattgactccacacttatcgatacccacctctttctcctccatttt |
30908174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 82 - 354
Target Start/End: Original strand, 5657771 - 5658046
Alignment:
Q |
82 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
181 |
Q |
|
|
|||||||||||||||||||||||||||| |||||||||| |||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
5657771 |
atcatacttatatctaatctttgttaacgttgctaatgactttgcaaaccctaaacctaaatagttttggctccaaaacaagggaggccgttggatctca |
5657870 |
T |
 |
Q |
182 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
279 |
Q |
|
|
|||||||| ||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
T |
5657871 |
tcatttggttaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcatt |
5657970 |
T |
 |
Q |
280 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctctt |
354 |
Q |
|
|
||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||| |
|
|
T |
5657971 |
aattatcctccaattcccaaattgactccacacttatcgatgcccacctctttctccttcatttttaagttctctt |
5658046 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 82 - 354
Target Start/End: Complemental strand, 14678142 - 14677868
Alignment:
Q |
82 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
181 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
14678142 |
atcatacttatatctaatctttgttaacattgctaatgactttgaaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctca |
14678043 |
T |
 |
Q |
182 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
279 |
Q |
|
|
|||||||||||| ||||||||||||| |||||||||||| |||||||| |||||||||| |||||||||||||| ||||||||||| |||||||||||| |
|
|
T |
14678042 |
tcatttggctaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttaatgtatatttcctatgcacttatccaagttttgactcatt |
14677943 |
T |
 |
Q |
280 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctctt |
354 |
Q |
|
|
||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
T |
14677942 |
aattatcatccaattcccaaattgactccacacttatc-atgtccacctctttctccttcatttttaagttctctt |
14677868 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 82 - 354
Target Start/End: Complemental strand, 31100993 - 31100718
Alignment:
Q |
82 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
181 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||| |
|
|
T |
31100993 |
atcatacttatatctaatctttgttaacattgctaatgactttgcaaatcctaaacctaaatggttttggctccaaaacaagggaggccgttcgatctca |
31100894 |
T |
 |
Q |
182 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
279 |
Q |
|
|
|||||||| ||| |||| |||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
T |
31100893 |
tcatttggttaagcatgtatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcatt |
31100794 |
T |
 |
Q |
280 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctctt |
354 |
Q |
|
|
||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||| |
|
|
T |
31100793 |
aattatcctccaattcccaaattgactccacacttatcgatgcccacctctttctccttcatttttaagttctctt |
31100718 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 82 - 255
Target Start/End: Complemental strand, 27541679 - 27541507
Alignment:
Q |
82 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
181 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||| |||||||||||| ||||||| |||||||||||||| |
|
|
T |
27541679 |
atcatacttatatctaatctttgttaacattgctaatgactttgcaaaccctaaacctaaatggctttggctccaaa-caagggacgccgttggatctca |
27541581 |
T |
 |
Q |
182 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta |
255 |
Q |
|
|
|||||||||||| ||||||||||||| |||||||||||| || ||||| ||||||||||||||||||||||||| |
|
|
T |
27541580 |
tcatttggctaagcatgcatctcatcctttgatctaatctgaatcaaactttcaaatttgatgtatatttccta |
27541507 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 43519573 - 43519520
Alignment:
Q |
30 |
aaagtgaataaatggatgtttggggtttgaattttggcctatgcataaagcaat |
83 |
Q |
|
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
T |
43519573 |
aaagtgaataaatggatgtttgggatttgaattttggcctatgcataaagcaat |
43519520 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 82 - 157
Target Start/End: Original strand, 23738657 - 23738731
Alignment:
Q |
82 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaa |
157 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||| |||||||| |||| | |||| | |||||||||||| |
|
|
T |
23738657 |
atcatacttatatctaatctttgttaacattgctaatgactttgcaaaccctaaccctaaa-gtttttggctccaa |
23738731 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 157
Target Start/End: Complemental strand, 24788155 - 24788079
Alignment:
Q |
81 |
aatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaa |
157 |
Q |
|
|
|||||||||||||||||||||| |||||||||||||||| |||||||| |||||| ||| | |||||||| |||| |
|
|
T |
24788155 |
aatcatacttatatctaatcttaattaacattgctaatgactttgcaaaccctaaacctaattagttttggcgccaa |
24788079 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 155
Target Start/End: Complemental strand, 33689415 - 33689343
Alignment:
Q |
82 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctcc |
155 |
Q |
|
|
||||||| ||||||||||||||||||||||||||||||| ||||| || |||| |||||| | |||||||||| |
|
|
T |
33689415 |
atcatacctatatctaatctttgttaacattgctaatgactttgcagaccctaaccttaaa-gtttttggctcc |
33689343 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 33689215 - 33689158
Alignment:
Q |
285 |
tcctccaattcctaaattgactccacacttatctatgtccacctctttctccttcatt |
342 |
Q |
|
|
|||||||||| | | |||||||||||||||||| || |||||||||||||||||||| |
|
|
T |
33689215 |
tcctccaatttccatattgactccacacttatccatacccacctctttctccttcatt |
33689158 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 8158458 - 8158497
Alignment:
Q |
79 |
gcaatcatacttatatctaatctttgttaacattgctaat |
118 |
Q |
|
|
||||||||||||||||||||| |||||||||| ||||||| |
|
|
T |
8158458 |
gcaatcatacttatatctaatttttgttaacaatgctaat |
8158497 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 194; Significance: 1e-105; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 82 - 344
Target Start/End: Complemental strand, 29863482 - 29863218
Alignment:
Q |
82 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
181 |
Q |
|
|
|||||||||||||||||||||||||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
29863482 |
atcatacttatatctaatctttgttaacattgctcatgactttgcaaaccgtaaacctaaatggttttggctccaaaacaagggaggccgttggatctca |
29863383 |
T |
 |
Q |
182 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
279 |
Q |
|
|
|||||||||| | ||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||| || ||||||||||| |||||||||||| |
|
|
T |
29863382 |
tcatttggctgagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcttatgcacttatccaagttttgactcatt |
29863283 |
T |
 |
Q |
280 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttcatttt |
344 |
Q |
|
|
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
T |
29863282 |
aattatcctccaattcccaaattgactccacacttatcgatgtccacctctttctccttcatttt |
29863218 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 143
Target Start/End: Original strand, 12506435 - 12506497
Alignment:
Q |
81 |
aatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaat |
143 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| |
|
|
T |
12506435 |
aatcatacttatatctaatctttgttaacattgctaatgactttgcaaatcctaaacctaaat |
12506497 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0045 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: scaffold0045
Description:
Target: scaffold0045; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 82 - 354
Target Start/End: Complemental strand, 11755 - 11480
Alignment:
Q |
82 |
atcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctca |
181 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||| |||||||||||||||||||||||||||||| |
|
|
T |
11755 |
atcatacttatatctaatctttgttaacattgctaatgactttgcaaaccctaaacctaactggttttgactccaaaacaagggaggccgttggatctca |
11656 |
T |
 |
Q |
182 |
tcatttggctaaccatgcatctcatcatttgatctaatccgagtcaaattttcaaatttgatgtatatttccta--cacttatccaaattttgactcatt |
279 |
Q |
|
|
|||||||| ||| ||||||||||||| |||||| ||||| |||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
T |
11655 |
tcatttggttaagcatgcatctcatcctttgatttaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcatt |
11556 |
T |
 |
Q |
280 |
aattatcctccaattcctaaattgactccacacttatctatgtccacctctttctccttca-ttttaagttctctt |
354 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||| |
|
|
T |
11555 |
cattatcctccaattcccaaattgactccacacttattgatgcccacctctttctccttcatttttaagttctctt |
11480 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0096 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0096
Description:
Target: scaffold0096; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 27409 - 27546
Alignment:
Q |
81 |
aatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaaacaagggaggccgttggatctc |
180 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||| |
|
|
T |
27409 |
aatcatacttatatctaatctttgttaacattgctaatgattttgcaaaccctaaacctaaatggttttggctcc-aaacaagggaggccgttggatctc |
27507 |
T |
 |
Q |
181 |
atcatttggctaaccatgcatctcatcatttgatctaat |
219 |
Q |
|
|
||||||||||||| ||||||||||||| ||||||||||| |
|
|
T |
27508 |
atcatttggctaagcatgcatctcatcctttgatctaat |
27546 |
T |
 |
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Target: chr1 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 50990911 - 50990983
Alignment:
Q |
86 |
tacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaaa |
158 |
Q |
|
|
|||||||||||||||||||||||||||||| || | |||||||| |||||| |||||||||||||||||||| |
|
|
T |
50990911 |
tacttatatctaatctttgttaacattgctgataactttgcaaaccctaaacctaaatggttttggctccaaa |
50990983 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 81 - 118
Target Start/End: Original strand, 25223218 - 25223255
Alignment:
Q |
81 |
aatcatacttatatctaatctttgttaacattgctaat |
118 |
Q |
|
|
|||||||||||||||||||||||||||||| ||||||| |
|
|
T |
25223218 |
aatcatacttatatctaatctttgttaacaatgctaat |
25223255 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0157 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0157
Description:
Target: scaffold0157; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 143
Target Start/End: Complemental strand, 14042 - 13980
Alignment:
Q |
81 |
aatcatacttatatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaat |
143 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| |
|
|
T |
14042 |
aatcatacttatatctaatctttgttaacattgctaatgactttgcaaatcctaaacctaaat |
13980 |
T |
 |
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Target: scaffold0475 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 157
Target Start/End: Complemental strand, 7585 - 7520
Alignment:
Q |
91 |
atatctaatctttgttaacattgctaatgaaattgcaaactctaaacttaaatggttttggctccaa |
157 |
Q |
|
|
|||| ||||||||||||||||||||||||| |||||||| |||| | |||| | |||||||||||| |
|
|
T |
7585 |
atatataatctttgttaacattgctaatgactttgcaaaccctaaccctaaa-gtttttggctccaa |
7520 |
T |
 |
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