View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10196_low_11 (Length: 352)
Name: NF10196_low_11
Description: NF10196
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10196_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 17 - 341
Target Start/End: Original strand, 10928230 - 10928575
Alignment:
| Q |
17 |
aataatattatgaaactagtgttaccttgagtattatttagttttcatcctccataggattctaaataaacatgtgcctgcca-gtactcagcttattat |
115 |
Q |
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| T |
10928230 |
aataatattatgaaactagtgtcacctagagtattatttagctttcatcctccataggattctaaataaacatgtgcctgccaagtactcagcttattat |
10928329 |
T |
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| Q |
116 |
ttgcagt--------------------aaatgtttggtacaatatgctaaatttgagatcttttttcgatggcagtgtggtgtggatgcaagtgcgacag |
195 |
Q |
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||| ||| |||| |||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||| | |
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| T |
10928330 |
ttgtagttttagcttacggttattggtaaatacttggtacaatatgctaaatttgagttcttttttcaatgacagtgtggtgtggatgcaagtgcgacgg |
10928429 |
T |
|
| Q |
196 |
accgggtgcttttacagtcacttaagccttctcttcacacaaatgtggattgtaatgcactagttgcagctgtagttcataggcaggtccatgttgtcag |
295 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10928430 |
accgggtgcttttacagtcacttaagccttctctccacacaaatgtggattgtaatgcactagttgcagctgtagttcataggcaggtccatgttgtcag |
10928529 |
T |
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| Q |
296 |
tttgctccttcaggtaaacttttctcttaaccgcttcaaacctttg |
341 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
10928530 |
tttgctccttcaggtaaacttttctcttaaccgcttcaaacttttg |
10928575 |
T |
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