View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10196_low_14 (Length: 332)
Name: NF10196_low_14
Description: NF10196
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10196_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 18 - 318
Target Start/End: Complemental strand, 37664320 - 37664023
Alignment:
| Q |
18 |
gtaacctcaatgaacggagttatgtcaccgttattaataataattccacctttctaattnnnnnnnnnnnnnntctctgatataatacattataattaca |
117 |
Q |
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| T |
37664320 |
gtaacctcaatgaacggagttatgtcaccgttattaataataattccacctttctaattaaaaaaaaaaa---tctctgatataatatattataattaca |
37664224 |
T |
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| Q |
118 |
atgttcggatgaatattgcctgaaatgaatttagaagtcatgctacttgaaatcggaaagccaatttcatgacttannnnnnnaaatatgtgtaggttaa |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
37664223 |
atgttcggatgaatattgcctgaaatgaatttagaagtcatgctacttgaaatcggaaagccaatttcatgacttatttttttaaatatgtgtaggttaa |
37664124 |
T |
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| Q |
218 |
agtgtgttttaaagggagaagaaaatggcaactctagtcgatattggcgtttctgctggcatcaatctgttttccgcaactatgttccttttagcgtttg |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37664123 |
agtgtgttttaaagggagaagaaaatggcaactctagtcgatattggcgtttctgctggcatcaatctgttttccgcaactatgttccttttagcgtttg |
37664024 |
T |
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