View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10196_low_8 (Length: 410)

Name: NF10196_low_8
Description: NF10196
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10196_low_8
NF10196_low_8
[»] chr7 (31 HSPs)
chr7 (68-391)||(26079835-26080158)
chr7 (68-391)||(26103622-26103945)
chr7 (82-164)||(18231742-18231824)
chr7 (1-47)||(26080237-26080283)
chr7 (1-47)||(26104024-26104070)
chr7 (82-144)||(41496963-41497025)
chr7 (81-163)||(4833536-4833618)
chr7 (179-228)||(24970283-24970332)
chr7 (179-228)||(33655226-33655275)
chr7 (180-233)||(40196651-40196704)
chr7 (180-228)||(34228437-34228485)
chr7 (186-228)||(48152057-48152099)
chr7 (179-228)||(17852948-17852997)
chr7 (179-224)||(22163227-22163272)
chr7 (179-224)||(22221935-22221980)
chr7 (179-228)||(41497075-41497124)
chr7 (180-228)||(25887269-25887317)
chr7 (82-161)||(13770954-13771033)
chr7 (82-149)||(35421970-35422037)
chr7 (181-228)||(47390932-47390979)
chr7 (82-144)||(1051674-1051736)
chr7 (82-164)||(13425126-13425208)
chr7 (180-244)||(34235126-34235189)
chr7 (82-164)||(42306486-42306568)
chr7 (82-144)||(48881564-48881626)
chr7 (82-143)||(33655285-33655346)
chr7 (82-163)||(34235013-34235094)
chr7 (179-228)||(39855983-39856032)
chr7 (183-228)||(45940778-45940823)
chr7 (180-228)||(1051617-1051665)
chr7 (112-164)||(24970201-24970253)
[»] chr6 (14 HSPs)
chr6 (179-244)||(13583782-13583845)
chr6 (180-228)||(2892722-2892770)
chr6 (82-143)||(16738002-16738063)
chr6 (82-164)||(1390475-1390557)
chr6 (82-164)||(19278040-19278122)
chr6 (187-228)||(5585428-5585469)
chr6 (179-228)||(19278156-19278205)
chr6 (81-163)||(2892848-2892930)
chr6 (82-144)||(9719037-9719099)
chr6 (82-144)||(31798924-31798986)
chr6 (82-164)||(34176491-34176572)
chr6 (183-228)||(2893707-2893752)
chr6 (192-228)||(6034203-6034239)
chr6 (278-306)||(10818430-10818458)
[»] chr2 (27 HSPs)
chr2 (85-164)||(40022529-40022608)
chr2 (179-234)||(16565848-16565903)
chr2 (179-228)||(28262561-28262610)
chr2 (82-143)||(36567028-36567090)
chr2 (179-228)||(8426989-8427038)
chr2 (179-228)||(15224812-15224861)
chr2 (179-228)||(31795887-31795936)
chr2 (123-164)||(34209620-34209661)
chr2 (183-228)||(36347663-36347708)
chr2 (179-228)||(36566969-36567018)
chr2 (184-228)||(19566944-19566988)
chr2 (180-228)||(40022447-40022495)
chr2 (82-157)||(31795775-31795850)
chr2 (179-244)||(37740009-37740073)
chr2 (179-226)||(39732847-39732894)
chr2 (183-225)||(6721744-6721786)
chr2 (183-233)||(29525855-29525905)
chr2 (82-144)||(45257483-45257545)
chr2 (179-228)||(35736252-35736301)
chr2 (179-228)||(39354292-39354341)
chr2 (179-224)||(41778854-41778899)
chr2 (180-220)||(18811413-18811453)
chr2 (82-158)||(23748257-23748333)
chr2 (180-228)||(32503236-32503284)
chr2 (257-305)||(36567045-36567093)
chr2 (82-158)||(42813782-42813858)
chr2 (278-306)||(45257309-45257337)
[»] chr3 (25 HSPs)
chr3 (179-228)||(24560294-24560343)
chr3 (82-163)||(41110327-41110408)
chr3 (179-228)||(46204963-46205012)
chr3 (180-228)||(43005858-43005906)
chr3 (179-226)||(14898055-14898102)
chr3 (82-144)||(220573-220635)
chr3 (81-143)||(10943619-10943681)
chr3 (82-160)||(23028086-23028164)
chr3 (81-159)||(27541936-27542014)
chr3 (179-228)||(651808-651857)
chr3 (179-228)||(2387878-2387927)
chr3 (183-228)||(25655094-25655139)
chr3 (179-228)||(27542049-27542098)
chr3 (180-228)||(21773859-21773907)
chr3 (192-228)||(31894019-31894055)
chr3 (180-228)||(41110440-41110488)
chr3 (182-228)||(16275826-16275872)
chr3 (125-163)||(39147190-39147228)
chr3 (82-144)||(55428555-55428617)
chr3 (179-228)||(18654718-18654767)
chr3 (184-225)||(36569026-36569067)
chr3 (82-163)||(41039956-41040037)
chr3 (176-228)||(10748412-10748464)
chr3 (192-228)||(31684363-31684399)
chr3 (181-244)||(52473978-52474039)
[»] chr8 (28 HSPs)
chr8 (81-144)||(31543077-31543140)
chr8 (82-144)||(8815147-8815209)
chr8 (179-228)||(41103624-41103673)
chr8 (180-233)||(42650455-42650508)
chr8 (88-164)||(11033574-11033650)
chr8 (181-228)||(31543192-31543239)
chr8 (179-244)||(11575524-11575587)
chr8 (82-164)||(16653105-16653187)
chr8 (179-244)||(37923196-37923259)
chr8 (179-228)||(6315139-6315188)
chr8 (180-228)||(7503073-7503121)
chr8 (181-228)||(2248529-2248576)
chr8 (181-228)||(3726975-3727022)
chr8 (81-144)||(36309019-36309082)
chr8 (82-164)||(10028279-10028361)
chr8 (82-164)||(11785682-11785764)
chr8 (82-164)||(31738579-31738661)
chr8 (82-144)||(43732863-43732925)
chr8 (179-224)||(1026967-1027012)
chr8 (91-164)||(1281299-1281372)
chr8 (82-147)||(11575579-11575644)
chr8 (179-228)||(13405053-13405102)
chr8 (179-228)||(16653026-16653075)
chr8 (183-228)||(30664438-30664483)
chr8 (180-244)||(37032442-37032504)
chr8 (278-306)||(2248454-2248482)
chr8 (180-228)||(28083819-28083867)
chr8 (112-164)||(29358376-29358428)
[»] chr5 (29 HSPs)
chr5 (179-244)||(9798730-9798793)
chr5 (183-244)||(10476090-10476150)
chr5 (179-228)||(16938556-16938605)
chr5 (82-144)||(1657989-1658051)
chr5 (82-164)||(13634867-13634949)
chr5 (179-228)||(9856957-9857006)
chr5 (179-228)||(10072765-10072814)
chr5 (179-228)||(13634788-13634837)
chr5 (192-244)||(14681532-14681582)
chr5 (179-228)||(42681530-42681579)
chr5 (180-228)||(7544213-7544261)
chr5 (82-162)||(10476186-10476266)
chr5 (83-164)||(10650434-10650517)
chr5 (82-137)||(30006626-30006681)
chr5 (82-144)||(11757079-11757141)
chr5 (82-144)||(14245094-14245156)
chr5 (82-144)||(26414899-26414961)
chr5 (82-144)||(36363208-36363270)
chr5 (179-228)||(4373684-4373733)
chr5 (179-228)||(11756954-11757003)
chr5 (179-228)||(17024342-17024391)
chr5 (179-224)||(37606975-37607020)
chr5 (82-163)||(37607051-37607132)
chr5 (179-224)||(37779184-37779229)
chr5 (82-163)||(37779260-37779341)
chr5 (180-228)||(2550471-2550519)
chr5 (275-307)||(16502003-16502035)
chr5 (184-228)||(22022927-22022971)
chr5 (182-226)||(26414972-26415016)
[»] chr4 (25 HSPs)
chr4 (179-244)||(36151639-36151702)
chr4 (179-228)||(2917081-2917130)
chr4 (179-228)||(6891437-6891486)
chr4 (179-228)||(45741967-45742016)
chr4 (180-228)||(35248763-35248811)
chr4 (179-244)||(26167000-26167063)
chr4 (179-228)||(27735822-27735871)
chr4 (179-228)||(37711220-37711269)
chr4 (179-228)||(47433826-47433875)
chr4 (179-227)||(16400878-16400926)
chr4 (180-228)||(31348440-31348488)
chr4 (82-158)||(54935231-54935307)
chr4 (179-225)||(41174425-41174471)
chr4 (82-144)||(45132671-45132733)
chr4 (179-228)||(54935145-54935195)
chr4 (179-228)||(5730948-5730997)
chr4 (82-139)||(41174526-41174583)
chr4 (179-228)||(44784069-44784118)
chr4 (82-143)||(47846233-47846294)
chr4 (183-228)||(49735590-49735635)
chr4 (180-225)||(54320514-54320559)
chr4 (82-163)||(55510326-55510406)
chr4 (82-158)||(5825058-5825134)
chr4 (278-306)||(31348535-31348563)
chr4 (278-306)||(51329798-51329826)
[»] chr1 (21 HSPs)
chr1 (180-228)||(49946707-49946755)
chr1 (179-228)||(30010409-30010458)
chr1 (82-163)||(40094939-40095020)
chr1 (179-228)||(44211023-44211072)
chr1 (180-228)||(2859051-2859099)
chr1 (179-227)||(32951436-32951484)
chr1 (180-232)||(42230611-42230663)
chr1 (180-228)||(51597745-51597793)
chr1 (181-228)||(26940963-26941010)
chr1 (179-244)||(40095051-40095115)
chr1 (82-144)||(1085666-1085728)
chr1 (82-164)||(8529955-8530037)
chr1 (82-144)||(12234186-12234248)
chr1 (82-163)||(41498561-41498643)
chr1 (175-228)||(6563654-6563707)
chr1 (179-228)||(8529876-8529925)
chr1 (181-226)||(10391951-10391996)
chr1 (183-228)||(38510016-38510061)
chr1 (179-228)||(50744399-50744448)
chr1 (82-158)||(2858938-2859014)
chr1 (82-162)||(26940850-26940929)
[»] scaffold0096 (1 HSPs)
scaffold0096 (179-244)||(6647-6710)
[»] scaffold0294 (1 HSPs)
scaffold0294 (180-228)||(15340-15388)
[»] scaffold0262 (2 HSPs)
scaffold0262 (180-228)||(16415-16463)
scaffold0262 (82-163)||(16302-16383)
[»] scaffold0341 (1 HSPs)
scaffold0341 (175-228)||(18847-18900)
[»] scaffold0067 (1 HSPs)
scaffold0067 (192-228)||(39321-39357)


Alignment Details
Target: chr7 (Bit Score: 158; Significance: 6e-84; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 68 - 391
Target Start/End: Complemental strand, 26080158 - 26079835
Alignment:
Q  68 tagtccaattataatgt--ttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatatttttn 165  Q
    ||||||| |||||||||  ||||||| ||||||||||||||||||||||  ||| |||||| |||| |||||||||||| |||||||| ||||||| ||     
T  26080158 tagtccacttataatgtgtttggatgaagggtttaagaggagaagagagaggataatttaccttttgtttttaaattacgaacagtataaaatattcttt 26080059  T
Q  166 nnnnnnnnttaaagatcatataatatttcaatcacattaaatttattttagaaaaacatgttaaatataatctgtaattnnnnnnnnnnncagtaaatca 265  Q
            |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||             |||||||     
T  26080058 ttaaaaa-ttaaagatcatataatatttcaatcacattaaatttattttaaaaaaatatgttaaatatagtctgtaattaaaaaaaaaaag-gtaaatct 26079961  T
Q  266 tctcatcattttccctcctaaactctcaatccaaacacaccttgatgtacttcaacgtgaaagagattaaaataaccatacaagaatttaaatatggcaa 365  Q
    ||| ||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  26079960 tcttatcattttccctcctaaactctccatccaaacacactttggtgtacttcaacgtgaaagagattaaaataaccatacaaaaatttaaatatggcaa 26079861  T
Q  366 gcaagcaaaagaaacaattttcgtca 391  Q
    |||||||||||||||||||| |||||    
T  26079860 gcaagcaaaagaaacaatttccgtca 26079835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 68 - 391
Target Start/End: Complemental strand, 26103945 - 26103622
Alignment:
Q  68 tagtccaattataatgt--ttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatatttttn 165  Q
    ||||||| |||||||||  ||||||| ||||||||||||||||||||||  ||| |||||| |||| |||||||||||| |||||||| ||||||| ||     
T  26103945 tagtccacttataatgtgtttggatgaagggtttaagaggagaagagagaggataatttaccttttgtttttaaattacgaacagtataaaatattcttt 26103846  T
Q  166 nnnnnnnnttaaagatcatataatatttcaatcacattaaatttattttagaaaaacatgttaaatataatctgtaattnnnnnnnnnnncagtaaatca 265  Q
            |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||             |||||||     
T  26103845 ttaaaaa-ttaaagatcatataatatttcaatcacattaaatttattttaaaaaaatatgttaaatatagtctgtaattaaaaaaaaaaag-gtaaatct 26103748  T
Q  266 tctcatcattttccctcctaaactctcaatccaaacacaccttgatgtacttcaacgtgaaagagattaaaataaccatacaagaatttaaatatggcaa 365  Q
    ||| ||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  26103747 tcttatcattttccctcctaaactctccatccaaacacactttggtgtacttcaacgtgaaagagattaaaataaccatacaaaaatttaaatatggcaa 26103648  T
Q  366 gcaagcaaaagaaacaattttcgtca 391  Q
    |||||||||||||||||||| |||||    
T  26103647 gcaagcaaaagaaacaatttccgtca 26103622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 18231824 - 18231742
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatattttt 164  Q
    ||||||||||||| ||||| |||| |||| |||| || ||||||||||| |||||||||||||||||| |||||||| |||||    
T  18231824 tgtttggatggagcgtttaggaggggaagggaggggaggatttacttttcatttttaaattacaaacactatgaaatgttttt 18231742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 26080283 - 26080237
Alignment:
Q  1 atggttgaaggaaggtccacatgagaaaattgaaagagaatttaaaa 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  26080283 atggttgaaggaaggtccacatgagaaaattgaaagagaatttaaaa 26080237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 26104070 - 26104024
Alignment:
Q  1 atggttgaaggaaggtccacatgagaaaattgaaagagaatttaaaa 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  26104070 atggttgaaggaaggtccacatgagaaaattgaaagagaatttaaaa 26104024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 41496963 - 41497025
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattac 144  Q
    ||||||||||||||||||| |||| |||| |||| ||||||||||||||||||||||||||||    
T  41496963 tgtttggatggagggtttaggaggggaagggaggggatgatttactttttatttttaaattac 41497025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 81 - 163
Target Start/End: Original strand, 4833536 - 4833618
Alignment:
Q  81 atgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatatttt 163  Q
    |||||||||||||||||||| |||| |||| |||| || | ||||||||| |||||||||||||| ||| |||||||| ||||    
T  4833536 atgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacagacactatgaaatgtttt 4833618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 24970283 - 24970332
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||||||||| | ||||||||||||||||||||||||    
T  24970283 gatcatataatacttcaatcacacttaatttattttagaaaaacatgtta 24970332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 33655226 - 33655275
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||||||||| | ||||||||||||||||||||||||    
T  33655226 gatcatataatacttcaatcacacttaatttattttagaaaaacatgtta 33655275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 40196651 - 40196704
Alignment:
Q  180 atcatataatatttcaatcacattaaatttattttagaaaaacatgttaaatat 233  Q
    ||||||||||| |||||||||| | |||||||||||||||||||||||| ||||    
T  40196651 atcatataatacttcaatcacacttaatttattttagaaaaacatgttatatat 40196704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 34228437 - 34228485
Alignment:
Q  180 atcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    ||||||||||| |||||||||| | ||||||||||||||||||||||||    
T  34228437 atcatataatacttcaatcacacttaatttattttagaaaaacatgtta 34228485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 48152099 - 48152057
Alignment:
Q  186 taatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    ||||| |||||||||| ||||||||||||||||||||||||||    
T  48152099 taatacttcaatcacactaaatttattttagaaaaacatgtta 48152057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 17852997 - 17852948
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    ||||||||||||  ||||||||| | ||||||||||||||||||||||||    
T  17852997 gatcatataatacctcaatcacacttaatttattttagaaaaacatgtta 17852948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 22163227 - 22163272
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacat 224  Q
    |||||||||||| |||||||||| | ||||||||||||||||||||    
T  22163227 gatcatataatacttcaatcacacttaatttattttagaaaaacat 22163272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 22221935 - 22221980
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacat 224  Q
    |||||||||||| |||||||||| | ||||||||||||||||||||    
T  22221935 gatcatataatacttcaatcacacttaatttattttagaaaaacat 22221980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 41497075 - 41497124
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||  |||||||||| | ||||||||||||||||||||||||    
T  41497075 gatcatataattcttcaatcacacttaatttattttagaaaaacatgtta 41497124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 25887317 - 25887269
Alignment:
Q  180 atcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    ||||||||||| | |||||||| | ||||||||||||||||||||||||    
T  25887317 atcatataatactccaatcacacttaatttattttagaaaaacatgtta 25887269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 82 - 161
Target Start/End: Original strand, 13770954 - 13771033
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatatt 161  Q
    ||||||||| |||| |||| |||| |||| |||| || ||||||||| |||||||||||||||  ||| ||| |||||||    
T  13770954 tgtttggattgaggatttaggaggggaagggaggggaggatttacttattatttttaaattacggacactataaaatatt 13771033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 82 - 149
Target Start/End: Original strand, 35421970 - 35422037
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaaca 149  Q
    ||||||||| |||| ||||||||| |||| ||| |||||| ||| ||||  |||||||||||||||||    
T  35421970 tgtttggattgaggatttaagaggtgaagggagaagatgacttatttttattttttaaattacaaaca 35422037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 47390979 - 47390932
Alignment:
Q  181 tcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||| |||||||||| | ||| ||||||||||||||||||||    
T  47390979 tcatataatacttcaatcacaattaatgtattttagaaaaacatgtta 47390932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 1051736 - 1051674
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattac 144  Q
    ||||||||| ||||||||| |||| |||| ||||||| |||||| ||||  ||||||||||||    
T  1051736 tgtttggattgagggtttaggaggggaagggaggagaggatttatttttcttttttaaattac 1051674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 13425126 - 13425208
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatattttt 164  Q
    ||||||||| ||||||||| |||| ||||  ||  |||| |||| ||||||||||||||||||| ||| ||  ||||||||||    
T  13425126 tgtttggatagagggtttaggaggggaaggaagaggatggtttattttttatttttaaattacagacactacaaaatattttt 13425208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 34235126 - 34235189
Alignment:
Q  180 atcatataatatttcaatcacattaaatttattttag-aaaaacatgttaaatataatctgtaatt 244  Q
    ||||||||||| |||||||||| | |||||||||||| |||||||||||  |||||||| ||||||    
T  34235126 atcatataatacttcaatcacacttaatttattttagaaaaaacatgtt--atataatccgtaatt 34235189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 42306568 - 42306486
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatattttt 164  Q
    ||||||||| ||||||||| |||| |||  |||| |||| |||| |||| |||||||||||||  ||| |||||||| |||||    
T  42306568 tgtttggattgagggtttaggaggggaattgaggggatggtttaattttcatttttaaattacggacactatgaaatgttttt 42306486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 48881564 - 48881626
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattac 144  Q
    ||||||||||||||||||| |||| |||| |||| ||||  ||||||||  ||||||||||||    
T  48881564 tgtttggatggagggtttaggaggggaagggaggggatggcttacttttcttttttaaattac 48881626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 143
Target Start/End: Complemental strand, 33655346 - 33655285
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaatta 143  Q
    ||||||||| ||||||||| |||| ||||||||| || | |||||||||  |||||||||||    
T  33655346 tgtttggattgagggtttaggaggggaagagaggcgagggtttacttttcttttttaaatta 33655285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 34235013 - 34235094
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatatttt 163  Q
    |||||||||||||||||| ||  | || |||||| ||  |||||||||| |||||||||||||  ||| |||||||| ||||    
T  34235013 tgtttggatggagggtttgagtagggacgagaggggagaatttacttttcatttttaaattacggacactatgaaatgtttt 34235094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 39855983 - 39856032
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| || | ||||| | ||||||||||||||||||||||||    
T  39855983 gatcatataatacttaagtcacacttaatttattttagaaaaacatgtta 39856032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 228
Target Start/End: Original strand, 45940778 - 45940823
Alignment:
Q  183 atataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||| |||||| ||||| ||||||||||||||||| ||||||    
T  45940778 atataatacttcaattacatttaatttattttagaaaaatatgtta 45940823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 1051617 - 1051665
Alignment:
Q  180 atcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    ||||||||||  |||||||||| | ||||||||||||||||||| ||||    
T  1051617 atcatataatgcttcaatcacacttaatttattttagaaaaacaggtta 1051665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 24970201 - 24970253
Alignment:
Q  112 gaggagatgatttactttttatttttaaattacaaacagtatgaaatattttt 164  Q
    |||| |||||||||||||| |||||||||||||  | | ||||||||||||||    
T  24970201 gaggggatgatttacttttcatttttaaattacggatactatgaaatattttt 24970253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 13583845 - 13583782
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgttaaatataatctgtaatt 244  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||  |||||||||||||||    
T  13583845 gatcatataatatttcaatcacacttaatttattttagaaaaacatgtt--atataatctgtaatt 13583782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 2892722 - 2892770
Alignment:
Q  180 atcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||    
T  2892722 atcatataatatttcaatcacactaaatttattttagaaaaacgtgtta 2892770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 143
Target Start/End: Original strand, 16738002 - 16738063
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaatta 143  Q
    |||||||||||||||||||||||  ||||||||| || |||||||||||  |||||||||||    
T  16738002 tgtttggatggagggtttaagagaggaagagaggggaagatttacttttcgtttttaaatta 16738063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 1390557 - 1390475
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatattttt 164  Q
    |||||||||| |||||||| |||| |||  ||||||  | ||||||||| |||||||||||||  ||| ||||||||||||||    
T  1390557 tgtttggatgaagggtttaggaggggaatggaggaggggttttacttttcatttttaaattactgacactatgaaatattttt 1390475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 19278040 - 19278122
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatattttt 164  Q
    ||||||||||||||||||| |||| ||||  ||||||   ||||||||| |||||||||||||  ||| ||| ||||||||||    
T  19278040 tgtttggatggagggtttaggaggggaaggaaggagagagtttacttttcatttttaaattactgacactataaaatattttt 19278122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 5585428 - 5585469
Alignment:
Q  187 aatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    ||||||||||||||| | ||||||||||||||||||||||||    
T  5585428 aatatttcaatcacacttaatttattttagaaaaacatgtta 5585469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 19278156 - 19278205
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||| ||| |||||||| | ||||||||||||||||||||||||||    
T  19278156 gatcatatgatacttcaatcagactaaatttattttagaaaaacatgtta 19278205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 81 - 163
Target Start/End: Original strand, 2892848 - 2892930
Alignment:
Q  81 atgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatatttt 163  Q
    |||||||||||||||||||| |||  ||||| |||| |    ||||||||| ||||||||||||  ||| |||||||||||||    
T  2892848 atgtttggatggagggtttatgagaggaagaaaggacagagcttactttttgtttttaaattacgcacactatgaaatatttt 2892930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 9719037 - 9719099
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattac 144  Q
    ||||||||| ||||||||| |||| |||| |||| || |||||| |||| |||||||||||||    
T  9719037 tgtttggattgagggtttaggaggggaagggaggggaggatttatttttcatttttaaattac 9719099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 31798924 - 31798986
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattac 144  Q
    ||||||||| ||||||||| ||||| |||||||||||||| |  |||||  ||||||||||||    
T  31798924 tgtttggattgagggtttaggaggataagagaggagatgactcgcttttattttttaaattac 31798986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 34176572 - 34176491
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatattttt 164  Q
    ||||||||||||||||||| |||| ||||||||  ||   |||| |||| |||||||||||||  ||| ||||||||||||||    
T  34176572 tgtttggatggagggtttatgagg-gaagagagatgagagtttagttttcatttttaaattacggacactatgaaatattttt 34176491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 228
Target Start/End: Complemental strand, 2893752 - 2893707
Alignment:
Q  183 atataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    ||||||||  ||||||||| | ||||||||||||||||||||||||    
T  2893752 atataatacatcaatcacacttaatttattttagaaaaacatgtta 2893707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 6034203 - 6034239
Alignment:
Q  192 ttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||| | ||||||||||||||||||||||||    
T  6034203 ttcaatcacacttaatttattttagaaaaacatgtta 6034239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 306
Target Start/End: Original strand, 10818430 - 10818458
Alignment:
Q  278 ccctcctaaactctcaatccaaacacacc 306  Q
    |||||||||||||||||||||||||||||    
T  10818430 ccctcctaaactctcaatccaaacacacc 10818458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 6e-16; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 40022608 - 40022529
Alignment:
Q  85 ttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatattttt 164  Q
    |||||||||||||||||||||||||| |||| || | ||||| ||| |||||||||||||| ||| |||||||| |||||    
T  40022608 ttggatggagggtttaagaggagaagggaggggagggtttacatttcatttttaaattacagacactatgaaatgttttt 40022529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 16565903 - 16565848
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgttaaatata 234  Q
    |||||||||||| |||||||||| | |||||||||||||||||||||||| |||||    
T  16565903 gatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatata 16565848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 28262561 - 28262610
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  28262561 gatcatgtaatatttcaatcacatgtaatttattttagaaaaacatgtta 28262610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 143
Target Start/End: Complemental strand, 36567090 - 36567028
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttacttttt-atttttaaatta 143  Q
    ||||||||| ||||||||| |||| ||| |||||||||||||||||||||  |||||||||||    
T  36567090 tgtttggattgagggtttaggaggggaatagaggagatgatttactttttcgtttttaaatta 36567028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 8426989 - 8427038
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| ||||||| || | ||||||||||||||||||||||||    
T  8426989 gatcatataatacttcaatcgcacttaatttattttagaaaaacatgtta 8427038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 15224812 - 15224861
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||||||||| | |||||||| |||||||||||||||    
T  15224812 gatcatataatacttcaatcacacttaatttattctagaaaaacatgtta 15224861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 31795887 - 31795936
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||||||||| | ||||||||||| ||||||||||||    
T  31795887 gatcatataatacttcaatcacacttaatttattttaaaaaaacatgtta 31795936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 34209661 - 34209620
Alignment:
Q  123 ttactttttatttttaaattacaaacagtatgaaatattttt 164  Q
    |||||||| |||||||||||||||||| ||||||||||||||    
T  34209661 ttacttttcatttttaaattacaaacactatgaaatattttt 34209620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 228
Target Start/End: Original strand, 36347663 - 36347708
Alignment:
Q  183 atataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||| |||||||||| | ||||||||||||||||||||||||    
T  36347663 atataatacttcaatcacacttaatttattttagaaaaacatgtta 36347708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 36566969 - 36567018
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||||||||| | |||||||| |||||||||||||||    
T  36566969 gatcatataatacttcaatcacaattaatttattatagaaaaacatgtta 36567018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 19566944 - 19566988
Alignment:
Q  184 tataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    ||||||| |||||||||| | ||||||||||||||||||||||||    
T  19566944 tataatacttcaatcacacttaatttattttagaaaaacatgtta 19566988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 40022495 - 40022447
Alignment:
Q  180 atcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    ||||||||||| |||||||||| | ||||||||||| ||||||||||||    
T  40022495 atcatataatacttcaatcacacttaatttattttacaaaaacatgtta 40022447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 82 - 157
Target Start/End: Original strand, 31795775 - 31795850
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaa 157  Q
    ||||||||||||||||||| |||| |||| |||| || || ||||||||  ||||||||||||  ||| |||||||    
T  31795775 tgtttggatggagggtttatgaggtgaagggaggggaggacttacttttcgtttttaaattacggacactatgaaa 31795850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 37740009 - 37740073
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttag-aaaaacatgttaaatataatctgtaatt 244  Q
    |||||||||||| |||||||||| | |||||||||||| |||||||||||  |||||||||| ||||    
T  37740009 gatcatataatacttcaatcacacttaatttattttagaaaaaacatgtt--atataatctggaatt 37740073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 39732847 - 39732894
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgt 226  Q
    |||||||||||| |||||||| | | ||||||||||||||||||||||    
T  39732847 gatcatataatacttcaatcatacttaatttattttagaaaaacatgt 39732894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 225
Target Start/End: Original strand, 6721744 - 6721786
Alignment:
Q  183 atataatatttcaatcacattaaatttattttagaaaaacatg 225  Q
    ||||||||||||||||||| |  ||||||||||||||||||||    
T  6721744 atataatatttcaatcacacttgatttattttagaaaaacatg 6721786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 29525855 - 29525905
Alignment:
Q  183 atataatatttcaatcacattaaatttattttagaaaaacatgttaaatat 233  Q
    |||||||| |||||||||||| ||||||||||| |||||||| ||| ||||    
T  29525855 atataatacttcaatcacatttaatttattttaaaaaaacatattatatat 29525905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 45257545 - 45257483
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattac 144  Q
    |||||||||||||| |||| || | |||| ||||||||| |||||||||  ||||||||||||    
T  45257545 tgtttggatggaggttttaggatgggaagggaggagatggtttacttttcttttttaaattac 45257483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 35736301 - 35736252
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||| ||||| |  |||||||||||||||||||||||    
T  35736301 gatcatataatacttcagtcacacttcatttattttagaaaaacatgtta 35736252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 39354292 - 39354341
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||| ||||| |||||||||| ||| ||||||||||| ||||||||||    
T  39354292 gatcatgtaatacttcaatcacactaactttattttagataaacatgtta 39354341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 41778899 - 41778854
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacat 224  Q
    |||||||||||| |||||||||| | ||||||||||| ||||||||    
T  41778899 gatcatataatacttcaatcacacttaatttattttaaaaaaacat 41778854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 18811453 - 18811413
Alignment:
Q  180 atcatataatatttcaatcacattaaatttattttagaaaa 220  Q
    |||||||||||||||||||||| | ||||||||||| ||||    
T  18811453 atcatataatatttcaatcacacttaatttattttaaaaaa 18811413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 158
Target Start/End: Complemental strand, 23748333 - 23748257
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaat 158  Q
    ||||||||||||||||||| |||| |||| |||| || | || |||||| ||||||||| |||  ||| ||||||||    
T  23748333 tgtttggatggagggtttaggaggggaagggaggggagggttcacttttcatttttaaactacggacactatgaaat 23748257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 32503284 - 32503236
Alignment:
Q  180 atcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||||| ||||| | | ||||||||||||||||| ||||||    
T  32503284 atcatataatattttaatcatacttaatttattttagaaaaatatgtta 32503236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 257 - 305
Target Start/End: Original strand, 36567045 - 36567093
Alignment:
Q  257 agtaaatcatctcatcattttccctcctaaactctcaatccaaacacac 305  Q
    ||||||||||||| ||  || ||||||||||| ||||||||||||||||    
T  36567045 agtaaatcatctcctctattcccctcctaaaccctcaatccaaacacac 36567093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 158
Target Start/End: Complemental strand, 42813858 - 42813782
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaat 158  Q
    |||||||||| |||||||| |||| ||||||||| ||||  ||| ||||  |||||||||||| |||| ||| ||||    
T  42813858 tgtttggatgaagggtttaggaggggaagagaggggatggcttatttttcttttttaaattacgaacattataaaat 42813782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 306
Target Start/End: Complemental strand, 45257337 - 45257309
Alignment:
Q  278 ccctcctaaactctcaatccaaacacacc 306  Q
    |||||||||||||||||||||||||||||    
T  45257337 ccctcctaaactctcaatccaaacacacc 45257309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 24560343 - 24560294
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  24560343 gatcatataatacttcaatcacatttaatttattttagaaaaacatgtta 24560294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 41110327 - 41110408
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatatttt 163  Q
    |||||||||||||| |||| |||| |||| ||||||| | ||||||||| |||||||||||||  ||| |||||||||||||    
T  41110327 tgtttggatggaggatttaggaggggaagggaggagaaggtttacttttcatttttaaattacggacactatgaaatatttt 41110408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 46205012 - 46204963
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||||||||| | ||||||||||||||||||||||||    
T  46205012 gatcatataatacttcaatcacacttaatttattttagaaaaacatgtta 46204963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 43005858 - 43005906
Alignment:
Q  180 atcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    ||||||||||| |||||||| ||||||||||||||||||||| ||||||    
T  43005858 atcatataatacttcaatcaaattaaatttattttagaaaaatatgtta 43005906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 14898102 - 14898055
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgt 226  Q
    |||||||||||| |||||||||| | ||||||||||||||||||||||    
T  14898102 gatcatataatacttcaatcacacttaatttattttagaaaaacatgt 14898055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 220635 - 220573
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattac 144  Q
    ||||||||||||||||||| ||||||||| |||| ||  ||||||||||  ||||||||||||    
T  220635 tgtttggatggagggtttaggaggagaagggaggggagaatttacttttcttttttaaattac 220573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 143
Target Start/End: Original strand, 10943619 - 10943681
Alignment:
Q  81 atgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaatta 143  Q
    ||||||||||||||||||||||||| |||  ||||||| |||||| ||||  |||||||||||    
T  10943619 atgtttggatggagggtttaagaggggaaaggaggagaagatttaattttcttttttaaatta 10943681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 160
Target Start/End: Complemental strand, 23028164 - 23028086
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatat 160  Q
    ||||||||||||||||||  |||| ||| |||||  | || ||||||||||||||||||||||  ||| ||||||||||    
T  23028164 tgtttggatggagggtttgggaggggaaaagagggcaggacttactttttatttttaaattacggacactatgaaatat 23028086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 159
Target Start/End: Original strand, 27541936 - 27542014
Alignment:
Q  81 atgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaata 159  Q
    |||||||||| ||||||||| |||| |||| ||||||||| || || ||| |||||||||||| | ||| |||||||||    
T  27541936 atgtttggattgagggtttaggaggggaagggaggagatggttcacatttcatttttaaattagagacactatgaaata 27542014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 651857 - 651808
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||| |||||||||| ||||||| | ||||||||||||||||||||||||    
T  651857 gatcgtataatattttaatcacacttaatttattttagaaaaacatgtta 651808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 2387878 - 2387927
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| || ||||||| | ||||||||||||||||||||||||    
T  2387878 gatcatataataatttaatcacacttaatttattttagaaaaacatgtta 2387927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 228
Target Start/End: Original strand, 25655094 - 25655139
Alignment:
Q  183 atataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||| |||||||||| | ||||||||||||||||||||||||    
T  25655094 atataatacttcaatcacacttaatttattttagaaaaacatgtta 25655139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 27542049 - 27542098
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||||||||| | ||||||||||||||||| ||||||    
T  27542049 gatcatataatacttcaatcacagttaatttattttagaaaaatatgtta 27542098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 21773907 - 21773859
Alignment:
Q  180 atcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    ||||||||||  |||||||||| | ||||||||||||||||||||||||    
T  21773907 atcatataattcttcaatcacacttaatttattttagaaaaacatgtta 21773859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 31894019 - 31894055
Alignment:
Q  192 ttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| ||||||||||||||||||||||||    
T  31894019 ttcaatcacatttaatttattttagaaaaacatgtta 31894055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 41110440 - 41110488
Alignment:
Q  180 atcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    ||||||||||| |||||||||| | |||||||||| |||||||||||||    
T  41110440 atcatataatacttcaatcacacttaatttattttcgaaaaacatgtta 41110488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 16275826 - 16275872
Alignment:
Q  182 catataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    ||||||||| |||||||||| |  |||||||||||||||||||||||    
T  16275826 catataatacttcaatcacacttgatttattttagaaaaacatgtta 16275872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 163
Target Start/End: Complemental strand, 39147228 - 39147190
Alignment:
Q  125 actttttatttttaaattacaaacagtatgaaatatttt 163  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  39147228 actttttatttttaaattacgaacagtattaaatatttt 39147190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 55428617 - 55428555
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattac 144  Q
    ||||||||| ||||||||| |||| |||| |||| ||||||||||||||  | ||||||||||    
T  55428617 tgtttggattgagggtttaggaggggaagggaggggatgatttacttttcttctttaaattac 55428555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 18654718 - 18654767
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||||| ||| | ||||||||||||| ||||||||||    
T  18654718 gatcatataatacttcaattacacttaatttattttagagaaacatgtta 18654767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 36569026 - 36569067
Alignment:
Q  184 tataatatttcaatcacattaaatttattttagaaaaacatg 225  Q
    ||||||| |||||||||| | |||||||||||||||||||||    
T  36569026 tataatagttcaatcacacttaatttattttagaaaaacatg 36569067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 41039956 - 41040037
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatatttt 163  Q
    |||||||||||| |||||| |||| ||||||||   | | |||| |||| | |||||||||||| ||| |||||||||||||    
T  41039956 tgtttggatggaaggtttaggaggggaagagagcgtaggctttaattttcaattttaaattacagacactatgaaatatttt 41040037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 10748412 - 10748464
Alignment:
Q  176 aaagatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||| |||||||||| ||  |||||| | ||||||||||||||||||||||||    
T  10748412 aaaggtcatataatacttttatcacacttaatttattttagaaaaacatgtta 10748464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 31684399 - 31684363
Alignment:
Q  192 ttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||| | ||||||||||||||||||||||||    
T  31684399 ttcaatcacacttaatttattttagaaaaacatgtta 31684363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 52474039 - 52473978
Alignment:
Q  181 tcatataatatttcaatcacattaaatttattttagaaaaacatgttaaatataatctgtaatt 244  Q
    |||||||||| |||||||||||  ||||||||||| || ||||||||  |||||||| ||||||    
T  52474039 tcatataatacttcaatcacatgtaatttattttaaaataacatgtt--atataatccgtaatt 52473978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 31543077 - 31543140
Alignment:
Q  81 atgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattac 144  Q
    ||||||||||||||||||||||||| |||| |||| || | ||||||||| |||||||||||||    
T  31543077 atgtttggatggagggtttaagaggggaagggaggggagggtttacttttcatttttaaattac 31543140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 8815147 - 8815209
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattac 144  Q
    ||||||||||||||||||| |||| ||||||||| ||||| ||||||||  ||||||||||||    
T  8815147 tgtttggatggagggtttaggaggggaagagaggtgatgacttacttttcttttttaaattac 8815209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 41103624 - 41103673
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||||||||| | ||||||||||||||||||||||||    
T  41103624 gatcatataatacttcaatcacacttaatttattttagaaaaacatgtta 41103673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 42650455 - 42650508
Alignment:
Q  180 atcatataatatttcaatcacattaaatttattttagaaaaacatgttaaatat 233  Q
    ||||||||||| |||||||||| | |||||||||||||||||||||||| ||||    
T  42650455 atcatataatacttcaatcacacttaatttattttagaaaaacatgttatatat 42650508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 11033650 - 11033574
Alignment:
Q  88 gatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatattttt 164  Q
    ||||||||||||| ||||||||| ||||||| ||||||||||| | ||||||||||  || | |||||||| |||||    
T  11033650 gatggagggtttaggaggagaagggaggagaagatttacttttcaattttaaattatgaatattatgaaatgttttt 11033574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 31543192 - 31543239
Alignment:
Q  181 tcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||| |||||||||| | ||||||||||||||||||||||||    
T  31543192 tcatataatacttcaatcacacttaatttattttagaaaaacatgtta 31543239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 11575524 - 11575587
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgttaaatataatctgtaatt 244  Q
    |||||||||||| || ||||||| | |||||||||||||||||||||||  ||||||| |||||||    
T  11575524 gatcatataatactttaatcacacttaatttattttagaaaaacatgtt--atataatttgtaatt 11575587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 16653187 - 16653105
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatattttt 164  Q
    |||||||||| | ||||||||||| |||| ||||||| | |||| |||| |||||||||||||  ||| |||||||| |||||    
T  16653187 tgtttggatgaatggtttaagaggggaagggaggagagggtttaattttcatttttaaattacggacattatgaaatgttttt 16653105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 37923196 - 37923259
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgttaaatataatctgtaatt 244  Q
    ||||||||||||||| |||| || | |||||||||||||||||||||||  ||||| |||||||||    
T  37923196 gatcatataatattttaatcgcacttaatttattttagaaaaacatgtt--atatagtctgtaatt 37923259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 6315188 - 6315139
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||| ||||||| |||||||||| | ||||||||||||||||||||||||    
T  6315188 gatcgtataatacttcaatcacacttaatttattttagaaaaacatgtta 6315139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 7503073 - 7503121
Alignment:
Q  180 atcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    ||||||||||| || ||||||| | ||||||||||||||||||||||||    
T  7503073 atcatataatactttaatcacacttaatttattttagaaaaacatgtta 7503121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 2248576 - 2248529
Alignment:
Q  181 tcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||||||| |  |||||||||||||||||||||||    
T  2248576 tcatataatattccaatcacacttgatttattttagaaaaacatgtta 2248529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 3726975 - 3727022
Alignment:
Q  181 tcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||||||||||   | ||||||||||||||||||||||||    
T  3726975 tcatataatatttcaatcatgcttaatttattttagaaaaacatgtta 3727022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 36309082 - 36309019
Alignment:
Q  81 atgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattac 144  Q
    |||||||||||||||||||| |||| |||| |||| || | ||||||||| || ||||||||||    
T  36309082 atgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatctttaaattac 36309019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 10028361 - 10028279
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatattttt 164  Q
    ||||||||  ||||||||| |||  |||| |||| || | ||||||||||| |||||||||||  ||| ||||||||||||||    
T  10028361 tgtttggacagagggtttaggagaggaagtgaggggagggtttactttttacttttaaattacggacactatgaaatattttt 10028279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 11785764 - 11785682
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatattttt 164  Q
    ||||||||||||||||||| ||||  |||||| | || | |||  |||| |||||||||||||  ||| ||||||||||||||    
T  11785764 tgtttggatggagggtttaggagggtaagagaagggagggtttgattttcatttttaaattacggacattatgaaatattttt 11785682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 31738661 - 31738579
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatattttt 164  Q
    ||||||||||||||||||| |||| ||||| ||| || | ||||  ||| |||||||||||||  ||| ||| ||||||||||    
T  31738661 tgtttggatggagggtttaggaggggaagaaaggggagggtttaaatttcatttttaaattacggacactataaaatattttt 31738579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 43732925 - 43732863
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattac 144  Q
    ||||||||||||||||||| |||| |||| |||| || | |||||||||  ||||||||||||    
T  43732925 tgtttggatggagggtttaggaggggaagggaggggagggtttacttttcttttttaaattac 43732863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 1026967 - 1027012
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacat 224  Q
    |||||||||||| |||||||| | | ||||||||||||||||||||    
T  1026967 gatcatataatacttcaatcatacttaatttattttagaaaaacat 1027012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 164
Target Start/End: Complemental strand, 1281372 - 1281299
Alignment:
Q  91 ggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatattttt 164  Q
    |||||||||||||   |||| |||| || |||||| |||| |||||||||||||  ||| ||||||||||||||    
T  1281372 ggagggtttaagataggaagggaggggaggatttagttttcatttttaaattacggacactatgaaatattttt 1281299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 11575644 - 11575579
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaa 147  Q
    |||||||||  |||||||| || |||||| |||| || | ||||||||| ||||||||||||||||    
T  11575644 tgtttggattcagggtttaggatgagaagggaggggagggtttacttttcatttttaaattacaaa 11575579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 13405102 - 13405053
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||||| | ||  ||||||||||||||||||||||||    
T  13405102 gatcatataataattcaattatatataatttattttagaaaaacatgtta 13405053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 16653075 - 16653026
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||||||||| |  |||||||||| ||||||||||||    
T  16653075 gatcatataatacttcaatcacacttgatttattttataaaaacatgtta 16653026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 228
Target Start/End: Complemental strand, 30664483 - 30664438
Alignment:
Q  183 atataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||| |||||||||| | |||||||||| |||||||||||||    
T  30664483 atataatacttcaatcacacttaatttatttttgaaaaacatgtta 30664438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 37032504 - 37032442
Alignment:
Q  180 atcatataatatttcaatcacattaaatttattttagaaaaacatgttaaatataatctgtaatt 244  Q
    ||||||||||| || ||||||| | ||||||||||| |||||||||||  ||||| |||||||||    
T  37032504 atcatataatactttaatcacacttaatttattttaaaaaaacatgtt--atatagtctgtaatt 37032442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 306
Target Start/End: Complemental strand, 2248482 - 2248454
Alignment:
Q  278 ccctcctaaactctcaatccaaacacacc 306  Q
    |||||||||||||||||||||||||||||    
T  2248482 ccctcctaaactctcaatccaaacacacc 2248454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 28083867 - 28083819
Alignment:
Q  180 atcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    ||||||||||| | |||||||| | ||||||||||||| ||||||||||    
T  28083867 atcatataatactccaatcacacttaatttattttagagaaacatgtta 28083819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 29358376 - 29358428
Alignment:
Q  112 gaggagatgatttactttttatttttaaattacaaacagtatgaaatattttt 164  Q
    ||||||| | |||||||||||||||||||||||  ||| ||| ||||||||||    
T  29358376 gaggagaaggtttactttttatttttaaattacggacactataaaatattttt 29358428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 9798730 - 9798793
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgttaaatataatctgtaatt 244  Q
    |||||||||||| |||||||||| | ||||||||| |||||||||||||  |||||||||||||||    
T  9798730 gatcatataatacttcaatcacaattaatttatttaagaaaaacatgtt--atataatctgtaatt 9798793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 10476150 - 10476090
Alignment:
Q  183 atataatatttcaatcacattaaatttattttagaaaaacatgttaaatataatctgtaatt 244  Q
    |||||||| |||||||||| | ||||||||||||||||||||| || |||||||||||||||    
T  10476150 atataatacttcaatcacacttaatttattttagaaaaacatg-tatatataatctgtaatt 10476090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 16938605 - 16938556
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    ||||||||||||||||||||||| | ||||||||||||| ||||||||||    
T  16938605 gatcatataatatttcaatcacacttaatttattttagagaaacatgtta 16938556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 1658051 - 1657989
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattac 144  Q
    ||||||||||||||||||| |||| |||| |||| || | ||||||||| |||||||||||||    
T  1658051 tgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattac 1657989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 13634949 - 13634867
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatattttt 164  Q
    ||||||||| ||||||||| |||| |||| |||| || |  |||||||| ||||||||||||| |||| |||||||| |||||    
T  13634949 tgtttggattgagggtttaggaggggaagggaggggaggggttacttttcatttttaaattacgaacactatgaaatgttttt 13634867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 9857006 - 9856957
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||||||||| |  |||||||||||||||||||||||    
T  9857006 gatcatataatacttcaatcacacttgatttattttagaaaaacatgtta 9856957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 10072765 - 10072814
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||||||| | | ||||||||||||||||||||||||    
T  10072765 gatcatataatacttcaatcatacttaatttattttagaaaaacatgtta 10072814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 13634837 - 13634788
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| ||||||||||   ||||||||||||||||||||||||    
T  13634837 gatcatataataattcaatcacacataatttattttagaaaaacatgtta 13634788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 14681582 - 14681532
Alignment:
Q  192 ttcaatcacattaaatttattttagaaaaacatgttaaatataatctgtaatt 244  Q
    |||||||||||| ||||||||||| |||||||||||  |||||||||||||||    
T  14681582 ttcaatcacatttaatttattttaaaaaaacatgtt--atataatctgtaatt 14681532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 42681579 - 42681530
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| || ||||||| |||| |||||||||||||||||||||    
T  42681579 gatcatataatactttaatcacactaaaattattttagaaaaacatgtta 42681530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 7544261 - 7544213
Alignment:
Q  180 atcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    ||||||||||| |||||||||| |  |||||||||||||||||||||||    
T  7544261 atcatataatacttcaatcacacttgatttattttagaaaaacatgtta 7544213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 162
Target Start/End: Complemental strand, 10476266 - 10476186
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatattt 162  Q
    ||||||||||||||||||| |||| |||| |||| ||   ||||||| | ||||||||||||| | || ||||||||||||    
T  10476266 tgtttggatggagggtttaggaggggaagggaggggagtgtttacttataatttttaaattacgaccactatgaaatattt 10476186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 10650434 - 10650517
Alignment:
Q  83 gtttggatggagggtttaagaggagaagag--aggagatgatttactttttatttttaaattacaaacagtatgaaatattttt 164  Q
    ||||||||||||| |||| |||| ||| ||  ||| || |||||||||||||||||||||||||  ||| |||||||| |||||    
T  10650434 gtttggatggaggatttaggaggggaaaagggaggggaggatttactttttatttttaaattacggacactatgaaatgttttt 10650517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 30006626 - 30006681
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttattttt 137  Q
    |||||| ||||||||||||||| || ||| ||||||| |||||||||||| |||||    
T  30006626 tgtttgaatggagggtttaagaagaaaagggaggagaagatttacttttttttttt 30006681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 11757141 - 11757079
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattac 144  Q
    |||||||||||||||||||||||| |||| |||| || | ||||  ||| |||||||||||||    
T  11757141 tgtttggatggagggtttaagaggggaagggaggggagggtttagatttcatttttaaattac 11757079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 14245094 - 14245156
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattac 144  Q
    ||||||||| ||||||||| |||| |||| |||| || |||||||||||  ||||||||||||    
T  14245094 tgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttttttaaattac 14245156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 26414899 - 26414961
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattac 144  Q
    ||||||||| ||||||||| ||||||||| |||| || | |||||||||  ||||||||||||    
T  26414899 tgtttggattgagggtttaggaggagaagggaggggagggtttacttttcgtttttaaattac 26414961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 36363270 - 36363208
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattac 144  Q
    ||||||||||||||||||| |||| |||| |||||||   || |||||| |||||||||||||    
T  36363270 tgtttggatggagggtttaggaggggaagggaggagagagttcacttttcatttttaaattac 36363208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 4373684 - 4373733
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    ||||||||||||||||||||||| | ||||||||||  |||||| |||||    
T  4373684 gatcatataatatttcaatcacacttaatttatttttaaaaaacttgtta 4373733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 11757003 - 11756954
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| || ||||||| | ||||||||||||| ||||||||||    
T  11757003 gatcatataatactttaatcacacttaatttattttagagaaacatgtta 11756954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 17024342 - 17024391
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||||||  | | ||||||||||||||||||||||||    
T  17024342 gatcatataatacttcaatcgtacttaatttattttagaaaaacatgtta 17024391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 37607020 - 37606975
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacat 224  Q
    |||||||||||| |||||||||||  ||||||||||| ||||||||    
T  37607020 gatcatataatacttcaatcacatataatttattttaaaaaaacat 37606975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 163
Target Start/End: Complemental strand, 37607132 - 37607051
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatatttt 163  Q
    ||||||||||||||||||| ||||  ||| |||  |||| ||||||||| ||||||||| |||| | | |||||||| ||||    
T  37607132 tgtttggatggagggtttacgagggaaagggagatgatggtttacttttcatttttaaaatacagatactatgaaatgtttt 37607051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 37779229 - 37779184
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacat 224  Q
    |||||||||||| |||||||||||  ||||||||||| ||||||||    
T  37779229 gatcatataatacttcaatcacatataatttattttaaaaaaacat 37779184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 163
Target Start/End: Complemental strand, 37779341 - 37779260
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatatttt 163  Q
    ||||||||||||||||||| ||||  ||| |||  |||| ||||||||| ||||||||| |||| | | |||||||| ||||    
T  37779341 tgtttggatggagggtttacgagggaaagggagatgatggtttacttttcatttttaaactacagatactatgaaatgtttt 37779260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 2550471 - 2550519
Alignment:
Q  180 atcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    ||||||||||| ||||||||||   |||||||| |||||||||||||||    
T  2550471 atcatataatacttcaatcacacgtaatttattatagaaaaacatgtta 2550519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 307
Target Start/End: Original strand, 16502003 - 16502035
Alignment:
Q  275 tttccctcctaaactctcaatccaaacacacct 307  Q
    |||||||||||||| ||||||||||||||||||    
T  16502003 tttccctcctaaaccctcaatccaaacacacct 16502035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 22022971 - 22022927
Alignment:
Q  184 tataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||| ||||||||||| | ||||||||||||||||| ||||||    
T  22022971 tataatctttcaatcacacttaatttattttagaaaaatatgtta 22022927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 26415016 - 26414972
Alignment:
Q  182 catataatatttcaatcacattaaatttattttagaaaaacatgt 226  Q
    ||||||||| |||||||||| | ||| ||||||||||||||||||    
T  26415016 catataatacttcaatcacacttaatatattttagaaaaacatgt 26414972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 36151702 - 36151639
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgttaaatataatctgtaatt 244  Q
    |||||||||||| |||||||||| | |||||||||||||||||||||||  ||||| |||||||||    
T  36151702 gatcatataatacttcaatcacacttaatttattttagaaaaacatgtt--atatagtctgtaatt 36151639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 2917081 - 2917130
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||||||||| |||||||||||||||||| |||||||    
T  2917081 gatcatataatacttcaatcacaataaatttattttagaaaatcatgtta 2917130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 6891486 - 6891437
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||||||||| | ||||||||||||||||||||||||    
T  6891486 gatcatataatacttcaatcacacttaatttattttagaaaaacatgtta 6891437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 45742016 - 45741967
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||||||||||| ||||||||||||||||||| ||||    
T  45742016 gatcatataatacttcaatcacatttaatttattttagaaaaacaagtta 45741967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 35248811 - 35248763
Alignment:
Q  180 atcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    ||||||||||| |||||||||| | ||||||||||||||||||||||||    
T  35248811 atcatataatacttcaatcacacttaatttattttagaaaaacatgtta 35248763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 26167063 - 26167000
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgttaaatataatctgtaatt 244  Q
    |||||||||||| |||||||||| | ||||||||||||| |||||||||  ||||| |||||||||    
T  26167063 gatcatataatacttcaatcacacttaatttattttagagaaacatgtt--atatagtctgtaatt 26167000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 27735871 - 27735822
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||||||||| | ||||||||||| ||||||||||||    
T  27735871 gatcatataatacttcaatcacacttaatttattttaaaaaaacatgtta 27735822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 37711269 - 37711220
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||||||||| | ||||||||||||| ||||||||||    
T  37711269 gatcatataatacttcaatcacacttaatttattttagagaaacatgtta 37711220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 47433826 - 47433875
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||||||||| | ||||||||||| ||||||||||||    
T  47433826 gatcatataatacttcaatcacacttaatttattttaaaaaaacatgtta 47433875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 16400926 - 16400878
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtt 227  Q
    |||||||||||| |||||||| | | |||||||||||||||||||||||    
T  16400926 gatcatataatacttcaatcataattaatttattttagaaaaacatgtt 16400878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 31348440 - 31348488
Alignment:
Q  180 atcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    ||||||||||| ||||||||||   ||||||||||||||||||||||||    
T  31348440 atcatataataattcaatcacacataatttattttagaaaaacatgtta 31348488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 158
Target Start/End: Complemental strand, 54935307 - 54935231
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaat 158  Q
    ||||||||||||||||||| |||| |||| |||| || | |||| |||| |||||||||||||  ||| ||||||||    
T  54935307 tgtttggatggagggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggacactatgaaat 54935231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 41174471 - 41174425
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatg 225  Q
    ||||||||||||  |||||||||||  ||||||||||||||||||||    
T  41174471 gatcatataatacatcaatcacatttgatttattttagaaaaacatg 41174425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 45132733 - 45132671
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattac 144  Q
    |||||| || ||| ||||| |||| |||||||||||||| |||||||||  ||||||||||||    
T  45132733 tgtttgaattgagagtttaggaggggaagagaggagatggtttacttttcttttttaaattac 45132671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 54935195 - 54935145
Alignment:
Q  179 gatcatataa-tatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||| || |||||||||| | ||||||||||||||||||||||||    
T  54935195 gatcatataaatacttcaatcacacttaatttattttagaaaaacatgtta 54935145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 5730948 - 5730997
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||||| ||| | ||||||||||||| ||||||||||    
T  5730948 gatcatataatacttcaattacacttaatttattttagagaaacatgtta 5730997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 139
Target Start/End: Complemental strand, 41174583 - 41174526
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaa 139  Q
    ||||||||||||||||||| |||| |||| |||| |||| |||| |||| ||||||||    
T  41174583 tgtttggatggagggtttaggaggggaagggaggggatggtttagttttcatttttaa 41174526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 44784118 - 44784069
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||||||||| | |||||| ||||||||||| |||||    
T  44784118 gatcatataatacttcaatcacacttaatttactttagaaaaacctgtta 44784069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 143
Target Start/End: Complemental strand, 47846294 - 47846233
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaatta 143  Q
    ||||||||| ||||||||||||||||||| || | || | |||||||||  |||||||||||    
T  47846294 tgtttggattgagggtttaagaggagaagggatgggagggtttacttttattttttaaatta 47846233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 228
Target Start/End: Original strand, 49735590 - 49735635
Alignment:
Q  183 atataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||||| |  |||||||||||||||||||||||    
T  49735590 atataatatttctatcacacttgatttattttagaaaaacatgtta 49735635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 225
Target Start/End: Complemental strand, 54320559 - 54320514
Alignment:
Q  180 atcatataatatttcaatcacattaaatttattttagaaaaacatg 225  Q
    ||||||||||| | |||||||| | |||||||||||||||||||||    
T  54320559 atcatataatactccaatcacacttaatttattttagaaaaacatg 54320514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 163
Target Start/End: Complemental strand, 55510406 - 55510326
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatatttt 163  Q
    ||||||||||||| ||||||||||  |||| | | || | ||||||||| ||||||||||||| |||| ||| |||||||||    
T  55510406 tgtttggatggagagtttaagagggaaagaaatgtgagggtttactttt-atttttaaattacgaacactataaaatatttt 55510326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 158
Target Start/End: Complemental strand, 5825134 - 5825058
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaat 158  Q
    ||||||||||||||||||| |||  |||| | ||||| |||||||||||  ||||| ||||||| ||| ||| ||||    
T  5825134 tgtttggatggagggtttaggagaggaagtggggagaggatttacttttcttttttgaattacagacattataaaat 5825058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 306
Target Start/End: Original strand, 31348535 - 31348563
Alignment:
Q  278 ccctcctaaactctcaatccaaacacacc 306  Q
    |||||||||||||||||||||||||||||    
T  31348535 ccctcctaaactctcaatccaaacacacc 31348563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 306
Target Start/End: Complemental strand, 51329826 - 51329798
Alignment:
Q  278 ccctcctaaactctcaatccaaacacacc 306  Q
    |||||||||||||||||||||||||||||    
T  51329826 ccctcctaaactctcaatccaaacacacc 51329798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 49946707 - 49946755
Alignment:
Q  180 atcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    ||||||||||| |||||||||||| ||||||||||| ||||||||||||    
T  49946707 atcatataatacttcaatcacatttaatttattttaaaaaaacatgtta 49946755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 30010458 - 30010409
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| ||||| |||| | ||||||||||||||||||||||||    
T  30010458 gatcatataatacttcaaccacacttaatttattttagaaaaacatgtta 30010409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 40094939 - 40095020
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatatttt 163  Q
    ||||||||||||||||||| |||| ||||  ||| || | ||||||||| |||||||||||||  ||| |||||||| ||||    
T  40094939 tgtttggatggagggtttaggaggggaaggaaggggagggtttacttttcatttttaaattacggacactatgaaatgtttt 40095020  T

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Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 44211023 - 44211072
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||||||||| | ||||||||||||||||||| ||||    
T  44211023 gatcatataatacttcaatcacacttaatttattttagaaaaacacgtta 44211072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 2859051 - 2859099
Alignment:
Q  180 atcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    ||||||||||| |||||||||| | |||||||||| |||||||||||||    
T  2859051 atcatataatacttcaatcacacttaatttatttttgaaaaacatgtta 2859099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 32951436 - 32951484
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtt 227  Q
    |||| ||||||| |||||||||| | |||||||||||||||||||||||    
T  32951436 gatcgtataatacttcaatcacacttaatttattttagaaaaacatgtt 32951484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 42230663 - 42230611
Alignment:
Q  180 atcatataatatttcaatcacattaaatttattttagaaaaacatgttaaata 232  Q
    ||||||||||| |||||||||| | ||||||||||  ||||||||||||||||    
T  42230663 atcatataatacttcaatcacacttaatttatttttaaaaaacatgttaaata 42230611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 51597793 - 51597745
Alignment:
Q  180 atcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    ||||||||||| |||||||||| | ||||||||||| ||||||||||||    
T  51597793 atcatataatacttcaatcacacttaatttattttaaaaaaacatgtta 51597745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 26940963 - 26941010
Alignment:
Q  181 tcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||| |||||||||| |  |||||||||||||||||||||||    
T  26940963 tcatataatacttcaatcacacttgatttattttagaaaaacatgtta 26941010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 40095051 - 40095115
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttag-aaaaacatgttaaatataatctgtaatt 244  Q
    |||||||||||| |||||||||| | |||||||||||| |||||||||||  ||||| |||||||||    
T  40095051 gatcatataatacttcaatcacacttaatttattttagaaaaaacatgtt--atatagtctgtaatt 40095115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 1085728 - 1085666
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattac 144  Q
    ||||||||| ||||||||| |||| |||| |||||||||| | ||||||  ||||||||||||    
T  1085728 tgtttggatagagggtttaggaggggaagggaggagatgactcacttttattttttaaattac 1085666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 8530037 - 8529955
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatattttt 164  Q
    |||||||||| || ||||| |||| |||| |||| ||   ||||||||| |||||||||||||  ||| ||||||||||||||    
T  8530037 tgtttggatgaagagtttaggaggggaagggaggtgaaagtttacttttcatttttaaattacggacactatgaaatattttt 8529955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 12234248 - 12234186
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattac 144  Q
    ||||||||||||||||||| |||| |||| |||| || | |||| |||| |||||||||||||    
T  12234248 tgtttggatggagggtttaggaggggaagggaggggagggtttagttttcatttttaaattac 12234186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 163
Target Start/End: Complemental strand, 41498643 - 41498561
Alignment:
Q  82 tgtttggatggagggtttaagaggag-aagagaggagatgatttactttttatttttaaattacaaacagtatgaaatatttt 163  Q
    ||||||||||||| ||||| |||| | ||| |||| || ||||||||||| |||||||||||||  ||| |||||||| ||||    
T  41498643 tgtttggatggagagtttaggaggggtaagggaggggaggatttacttttcatttttaaattacggacactatgaaatgtttt 41498561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 6563707 - 6563654
Alignment:
Q  175 taaagatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||||||| |||||| |||   ||||||||||||||| ||||||||    
T  6563707 taaagatcatataataattcaatgacacataatttattttagaaagacatgtta 6563654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 8529925 - 8529876
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||||||||| | ||||||||| | ||||||||||||    
T  8529925 gatcatataatacttcaatcacacttaatttatttaaaaaaaacatgtta 8529876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 10391996 - 10391951
Alignment:
Q  181 tcatataatatttcaatcacattaaatttattttagaaaaacatgt 226  Q
    |||||||||| || ||||||| | ||||||||||||||||||||||    
T  10391996 tcatataatactttaatcacaattaatttattttagaaaaacatgt 10391951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 228
Target Start/End: Original strand, 38510016 - 38510061
Alignment:
Q  183 atataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||| |||||||||| |  |||||||||||||||||||||||    
T  38510016 atataatacttcaatcacacttgatttattttagaaaaacatgtta 38510061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 50744399 - 50744448
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||| |||||||||| | ||||||||||||| |||| |||||    
T  50744399 gatcatataatacttcaatcacacttaatttattttagagaaacctgtta 50744448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 158
Target Start/End: Original strand, 2858938 - 2859014
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaat 158  Q
    ||||||||||||||||||| ||||  ||| |||| || | ||||||||| |||| ||||||||| ||  ||||||||    
T  2858938 tgtttggatggagggtttaggagggaaagggaggggagggtttacttttcatttctaaattacagaccctatgaaat 2859014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 162
Target Start/End: Original strand, 26940850 - 26940929
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatattt 162  Q
    |||||| || |||||||||||||  ||||||| | || | || ||||||||||||||||||| | ||| ||||||||||||    
T  26940850 tgtttgaattgagggtttaagagt-gaagagatgggagggttcactttttatttttaaattatagacactatgaaatattt 26940929  T

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Target: scaffold0096 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 6710 - 6647
Alignment:
Q  179 gatcatataatatttcaatcacattaaatttattttagaaaaacatgttaaatataatctgtaatt 244  Q
    |||||||||||| |||||||||| |||||||||||||||| |||| |||  ||||| |||||||||    
T  6710 gatcatataatacttcaatcacactaaatttattttagaataacaagtt--atatagtctgtaatt 6647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 15388 - 15340
Alignment:
Q  180 atcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    ||||||||||| ||||| |||| | ||||||||||||||||||||||||    
T  15388 atcatataatacttcaaccacacttaatttattttagaaaaacatgtta 15340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 16415 - 16463
Alignment:
Q  180 atcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    ||||||||||| |||||||||| | ||||||||||||| ||||||||||    
T  16415 atcatataatacttcaatcacacttaatttattttagacaaacatgtta 16463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 16302 - 16383
Alignment:
Q  82 tgtttggatggagggtttaagaggagaagagaggagatgatttactttttatttttaaattacaaacagtatgaaatatttt 163  Q
    ||||||||||||||||||| ||||  ||  |||| || | ||||||||| ||||||||||||  |||| |||||||| ||||    
T  16302 tgtttggatggagggtttaggagggaaaaggaggggagggtttacttttcatttttaaattatgaacactatgaaatgtttt 16383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 18900 - 18847
Alignment:
Q  175 taaagatcatataatatttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||||||||| |||||| |||   ||||||||||||||| ||||||||    
T  18900 taaagatcatataataattcaatgacacataatttattttagaaagacatgtta 18847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 39321 - 39357
Alignment:
Q  192 ttcaatcacattaaatttattttagaaaaacatgtta 228  Q
    |||||||||| | ||||||||||||||||||||||||    
T  39321 ttcaatcacacttaatttattttagaaaaacatgtta 39357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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