View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10197_high_29 (Length: 231)

Name: NF10197_high_29
Description: NF10197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10197_high_29
NF10197_high_29
[»] chr6 (40 HSPs)
chr6 (2-218)||(16554772-16554988)
chr6 (2-218)||(16631328-16631544)
chr6 (2-225)||(16653008-16653231)
chr6 (2-218)||(16578567-16578783)
chr6 (2-218)||(16616597-16616813)
chr6 (1-218)||(25421208-25421426)
chr6 (1-209)||(27647775-27647980)
chr6 (1-218)||(6027151-6027367)
chr6 (1-218)||(33342153-33342370)
chr6 (1-218)||(34164761-34164978)
chr6 (1-218)||(34166983-34167200)
chr6 (9-209)||(412014-412214)
chr6 (1-141)||(13153893-13154035)
chr6 (2-209)||(3072808-3073016)
chr6 (42-211)||(6097528-6097699)
chr6 (2-211)||(2171581-2171796)
chr6 (3-212)||(31404725-31404940)
chr6 (3-212)||(5406250-5406464)
chr6 (3-212)||(5410575-5410789)
chr6 (3-212)||(5413444-5413658)
chr6 (2-211)||(30834585-30834801)
chr6 (2-211)||(16452378-16452594)
chr6 (3-121)||(2972989-2973107)
chr6 (3-121)||(21588931-21589049)
chr6 (3-121)||(21593664-21593782)
chr6 (3-121)||(33160402-33160521)
chr6 (3-118)||(17758026-17758141)
chr6 (3-121)||(9183081-9183199)
chr6 (46-204)||(16568953-16569110)
chr6 (3-121)||(3808758-3808877)
chr6 (3-121)||(22424876-22424995)
chr6 (3-121)||(3038953-3039071)
chr6 (3-121)||(28137458-28137576)
chr6 (3-121)||(4045423-4045542)
chr6 (8-121)||(17762990-17763103)
chr6 (3-119)||(26830173-26830289)
chr6 (3-118)||(26954336-26954450)
chr6 (3-118)||(5043630-5043745)
chr6 (54-135)||(16567185-16567265)
chr6 (3-121)||(33211235-33211353)
[»] chr1 (59 HSPs)
chr1 (1-218)||(9036320-9036536)
chr1 (1-211)||(40282287-40282497)
chr1 (1-218)||(44203536-44203752)
chr1 (1-211)||(21053868-21054078)
chr1 (1-211)||(9987112-9987321)
chr1 (1-211)||(20622285-20622496)
chr1 (2-209)||(51765300-51765516)
chr1 (2-122)||(13316401-13316521)
chr1 (3-211)||(20762575-20762790)
chr1 (3-121)||(37168297-37168416)
chr1 (3-118)||(8550837-8550952)
chr1 (3-121)||(3156865-3156983)
chr1 (3-121)||(28220276-28220394)
chr1 (3-121)||(37503607-37503722)
chr1 (3-121)||(44455160-44455278)
chr1 (3-121)||(49918350-49918468)
chr1 (3-121)||(50169260-50169378)
chr1 (3-118)||(834217-834332)
chr1 (3-121)||(3189330-3189448)
chr1 (3-121)||(3198147-3198265)
chr1 (3-121)||(3206986-3207104)
chr1 (3-121)||(13547139-13547257)
chr1 (3-121)||(28265604-28265722)
chr1 (3-121)||(42298025-42298143)
chr1 (3-121)||(47255390-47255508)
chr1 (3-121)||(7482280-7482399)
chr1 (3-121)||(19754494-19754613)
chr1 (3-121)||(37033122-37033241)
chr1 (2-121)||(23555314-23555433)
chr1 (3-121)||(1833522-1833640)
chr1 (3-121)||(4552687-4552805)
chr1 (3-121)||(11348698-11348816)
chr1 (3-121)||(13549050-13549168)
chr1 (3-121)||(28223471-28223589)
chr1 (3-121)||(31925757-31925875)
chr1 (3-121)||(41360914-41361032)
chr1 (3-121)||(45644404-45644523)
chr1 (3-121)||(34603576-34603695)
chr1 (3-121)||(47115171-47115290)
chr1 (3-118)||(196958-197073)
chr1 (3-118)||(3847171-3847286)
chr1 (3-121)||(29136247-29136365)
chr1 (3-121)||(31659238-31659356)
chr1 (3-121)||(50167225-50167343)
chr1 (3-116)||(22079322-22079435)
chr1 (3-121)||(37559918-37560037)
chr1 (48-121)||(37879005-37879079)
chr1 (49-118)||(8871143-8871213)
chr1 (3-103)||(15820326-15820425)
chr1 (3-121)||(193611-193729)
chr1 (21-100)||(928043-928123)
chr1 (21-116)||(12318589-12318685)
chr1 (35-99)||(48382441-48382505)
chr1 (41-107)||(3460710-3460778)
chr1 (8-121)||(30476501-30476614)
chr1 (40-103)||(32736952-32737015)
chr1 (40-103)||(35109493-35109556)
chr1 (3-121)||(19752685-19752804)
chr1 (3-121)||(13138026-13138142)
[»] chr7 (64 HSPs)
chr7 (1-211)||(20343807-20344017)
chr7 (1-218)||(6592388-6592604)
chr7 (1-218)||(6594606-6594822)
chr7 (1-218)||(18388808-18389024)
chr7 (1-218)||(18392244-18392460)
chr7 (1-207)||(32060370-32060579)
chr7 (1-211)||(24789751-24789961)
chr7 (51-218)||(1562103-1562268)
chr7 (2-209)||(43504203-43504411)
chr7 (2-209)||(39731281-39731488)
chr7 (2-211)||(25767009-25767219)
chr7 (2-211)||(35853818-35854033)
chr7 (2-211)||(48408705-48408923)
chr7 (3-210)||(29990959-29991171)
chr7 (3-121)||(14069883-14070001)
chr7 (3-121)||(14379911-14380029)
chr7 (3-121)||(41317484-41317602)
chr7 (6-211)||(4178678-4178888)
chr7 (3-121)||(27347817-27347935)
chr7 (3-121)||(30024782-30024900)
chr7 (3-121)||(34310766-34310884)
chr7 (3-121)||(47673993-47674111)
chr7 (3-121)||(48491579-48491697)
chr7 (8-121)||(18126644-18126757)
chr7 (8-121)||(29608737-29608850)
chr7 (9-121)||(2361028-2361140)
chr7 (3-121)||(23555039-23555158)
chr7 (3-118)||(38671272-38671387)
chr7 (3-121)||(4586161-4586279)
chr7 (3-209)||(19502083-19502296)
chr7 (3-121)||(22269973-22270091)
chr7 (9-191)||(25615785-25615965)
chr7 (3-118)||(41649061-41649175)
chr7 (3-121)||(8359366-8359485)
chr7 (21-121)||(4253595-4253697)
chr7 (3-121)||(8153342-8153460)
chr7 (49-121)||(23343975-23344048)
chr7 (50-121)||(24525992-24526065)
chr7 (3-121)||(26417316-26417434)
chr7 (1-44)||(1560714-1560757)
chr7 (9-121)||(36146464-36146576)
chr7 (3-121)||(4508756-4508874)
chr7 (3-121)||(6431971-6432089)
chr7 (3-102)||(23565111-23565210)
chr7 (3-121)||(31733019-31733137)
chr7 (23-121)||(47676205-47676304)
chr7 (3-121)||(48599384-48599502)
chr7 (3-118)||(496033-496148)
chr7 (49-121)||(12097954-12098027)
chr7 (35-116)||(22328471-22328556)
chr7 (3-118)||(31105443-31105558)
chr7 (49-121)||(48489431-48489504)
chr7 (3-121)||(3258995-3259113)
chr7 (3-121)||(43864244-43864362)
chr7 (4-121)||(4510599-4510716)
chr7 (4-121)||(4512441-4512558)
chr7 (21-121)||(31518795-31518896)
chr7 (3-118)||(1113660-1113775)
chr7 (3-103)||(2390301-2390400)
chr7 (8-96)||(2759252-2759339)
chr7 (119-211)||(24514934-24515025)
chr7 (49-102)||(28617182-28617234)
chr7 (3-67)||(32358104-32358167)
chr7 (3-121)||(36574565-36574683)
[»] chr5 (45 HSPs)
chr5 (1-218)||(10593161-10593378)
chr5 (1-218)||(25078023-25078241)
chr5 (1-218)||(25135992-25136210)
chr5 (1-211)||(29751208-29751418)
chr5 (1-211)||(29720274-29720484)
chr5 (1-211)||(29722434-29722644)
chr5 (8-207)||(22536345-22536541)
chr5 (2-218)||(40379995-40380210)
chr5 (2-218)||(40382206-40382421)
chr5 (1-218)||(16546534-16546751)
chr5 (1-218)||(16544312-16544529)
chr5 (2-209)||(18441697-18441904)
chr5 (2-209)||(9789273-9789480)
chr5 (2-209)||(16409387-16409594)
chr5 (2-209)||(26177795-26178001)
chr5 (3-204)||(25412672-25412878)
chr5 (42-209)||(26170686-26170853)
chr5 (2-211)||(13342964-13343179)
chr5 (2-211)||(30182492-30182707)
chr5 (3-121)||(32636824-32636942)
chr5 (2-211)||(36074092-36074309)
chr5 (21-121)||(13695757-13695859)
chr5 (3-121)||(213465-213583)
chr5 (3-121)||(13239751-13239869)
chr5 (3-121)||(13488203-13488321)
chr5 (3-121)||(42428480-42428598)
chr5 (9-118)||(39468605-39468714)
chr5 (3-118)||(33831683-33831798)
chr5 (3-102)||(37439161-37439259)
chr5 (3-121)||(40147261-40147379)
chr5 (3-121)||(28278316-28278434)
chr5 (3-121)||(42426285-42426403)
chr5 (8-121)||(533769-533882)
chr5 (3-118)||(31182976-31183089)
chr5 (3-118)||(8565996-8566111)
chr5 (3-118)||(9049392-9049506)
chr5 (3-121)||(28750705-28750823)
chr5 (3-121)||(27637663-27637781)
chr5 (3-204)||(30682972-30683178)
chr5 (3-118)||(538028-538143)
chr5 (3-121)||(5058047-5058163)
chr5 (49-117)||(38747009-38747078)
chr5 (3-191)||(16452003-16452198)
chr5 (69-121)||(27015531-27015583)
chr5 (21-115)||(316769-316864)
[»] chr3 (67 HSPs)
chr3 (1-211)||(54635035-54635244)
chr3 (1-209)||(6716412-6716619)
chr3 (1-211)||(45282893-45283106)
chr3 (1-218)||(3617352-3617570)
chr3 (1-218)||(25637331-25637547)
chr3 (1-207)||(4600792-4600998)
chr3 (1-207)||(4598571-4598777)
chr3 (1-207)||(10211309-10211515)
chr3 (1-218)||(10056122-10056339)
chr3 (1-218)||(10058344-10058561)
chr3 (1-218)||(10060566-10060783)
chr3 (1-218)||(10062788-10063005)
chr3 (1-218)||(10065010-10065227)
chr3 (1-207)||(10209089-10209295)
chr3 (19-218)||(10067232-10067431)
chr3 (87-209)||(6718596-6718718)
chr3 (1-209)||(801003-801212)
chr3 (2-158)||(7780053-7780208)
chr3 (3-217)||(45095062-45095281)
chr3 (2-211)||(23200187-23200402)
chr3 (2-212)||(5260372-5260589)
chr3 (3-121)||(37408458-37408576)
chr3 (2-211)||(23197988-23198203)
chr3 (2-209)||(5258193-5258407)
chr3 (2-209)||(9636175-9636390)
chr3 (3-118)||(19683939-19684054)
chr3 (3-121)||(29196436-29196555)
chr3 (3-121)||(7762265-7762383)
chr3 (3-110)||(7764476-7764582)
chr3 (3-118)||(22835052-22835167)
chr3 (3-118)||(39153411-39153526)
chr3 (3-121)||(4569952-4570070)
chr3 (3-117)||(30236129-30236243)
chr3 (3-121)||(34491212-34491330)
chr3 (3-121)||(40734498-40734616)
chr3 (3-121)||(44700528-44700646)
chr3 (21-121)||(5236523-5236624)
chr3 (3-119)||(31314447-31314563)
chr3 (8-121)||(41819578-41819691)
chr3 (3-121)||(49199519-49199638)
chr3 (3-118)||(760850-760965)
chr3 (3-121)||(44331545-44331663)
chr3 (3-209)||(40735288-40735501)
chr3 (3-209)||(32744486-32744689)
chr3 (3-118)||(29682362-29682477)
chr3 (8-121)||(43401856-43401970)
chr3 (3-114)||(9581290-9581400)
chr3 (3-121)||(29813063-29813181)
chr3 (3-121)||(46860474-46860592)
chr3 (3-117)||(51398818-51398932)
chr3 (3-121)||(53921553-53921671)
chr3 (49-121)||(5433971-5434046)
chr3 (3-119)||(32891105-32891222)
chr3 (3-121)||(6095649-6095767)
chr3 (3-121)||(29810868-29810986)
chr3 (41-121)||(51352197-51352278)
chr3 (3-121)||(54593704-54593822)
chr3 (3-116)||(4055813-4055926)
chr3 (3-102)||(46173377-46173475)
chr3 (50-109)||(28253363-28253423)
chr3 (3-121)||(36018852-36018970)
chr3 (3-121)||(43403794-43403913)
chr3 (50-118)||(9666562-9666632)
chr3 (3-121)||(23391959-23392077)
chr3 (48-101)||(25517069-25517121)
chr3 (19-121)||(31340266-31340369)
chr3 (49-101)||(4386875-4386926)
[»] chr8 (47 HSPs)
chr8 (1-207)||(25689869-25690074)
chr8 (1-209)||(3439416-3439623)
chr8 (1-207)||(15290438-15290644)
chr8 (1-207)||(15470807-15471013)
chr8 (1-207)||(42575372-42575578)
chr8 (2-209)||(2627647-2627855)
chr8 (3-212)||(34254381-34254594)
chr8 (3-212)||(34256557-34256770)
chr8 (2-210)||(44303758-44303974)
chr8 (2-211)||(17982556-17982772)
chr8 (9-211)||(31218160-31218369)
chr8 (2-211)||(19945408-19945625)
chr8 (6-118)||(44353796-44353908)
chr8 (3-121)||(9765745-9765863)
chr8 (3-121)||(15212786-15212904)
chr8 (3-121)||(27811278-27811396)
chr8 (3-121)||(42498193-42498312)
chr8 (3-121)||(3303720-3303838)
chr8 (3-121)||(4283524-4283642)
chr8 (3-121)||(30291606-30291725)
chr8 (3-121)||(33352150-33352268)
chr8 (2-107)||(1746268-1746371)
chr8 (8-121)||(42435046-42435159)
chr8 (3-115)||(30143346-30143458)
chr8 (9-121)||(43036423-43036535)
chr8 (3-107)||(12702684-12702787)
chr8 (3-121)||(18141821-18141938)
chr8 (3-121)||(4731658-4731776)
chr8 (3-121)||(19491749-19491867)
chr8 (3-118)||(40328782-40328898)
chr8 (9-121)||(1292519-1292631)
chr8 (9-121)||(18655400-18655512)
chr8 (3-119)||(40321082-40321198)
chr8 (21-121)||(8965758-8965859)
chr8 (3-121)||(40221745-40221863)
chr8 (3-117)||(41366664-41366778)
chr8 (9-118)||(6598975-6599084)
chr8 (9-118)||(6674428-6674537)
chr8 (3-117)||(5689275-5689389)
chr8 (49-116)||(1822297-1822365)
chr8 (49-116)||(1856742-1856810)
chr8 (35-117)||(41364927-41365011)
chr8 (21-103)||(4162516-4162598)
chr8 (49-97)||(6813771-6813818)
chr8 (49-116)||(10240159-10240227)
chr8 (8-117)||(11383989-11384098)
chr8 (45-116)||(29796413-29796485)
[»] chr4 (63 HSPs)
chr4 (1-218)||(8395508-8395723)
chr4 (1-218)||(8393299-8393514)
chr4 (1-218)||(7122585-7122803)
chr4 (1-218)||(7124804-7125022)
chr4 (1-218)||(5138193-5138410)
chr4 (1-218)||(5135967-5136185)
chr4 (2-209)||(31495365-31495573)
chr4 (2-211)||(13992342-13992551)
chr4 (3-210)||(29999856-30000069)
chr4 (3-121)||(56178687-56178805)
chr4 (3-121)||(9927508-9927626)
chr4 (3-121)||(52095412-52095530)
chr4 (3-121)||(26364236-26364354)
chr4 (3-121)||(36994524-36994642)
chr4 (3-121)||(40632445-40632563)
chr4 (3-121)||(37229771-37229890)
chr4 (3-117)||(2209717-2209832)
chr4 (3-121)||(41964415-41964534)
chr4 (3-121)||(46703500-46703619)
chr4 (21-121)||(54199973-54200074)
chr4 (8-119)||(46147446-46147557)
chr4 (3-121)||(12073392-12073510)
chr4 (3-121)||(12739600-12739718)
chr4 (3-102)||(12743975-12744073)
chr4 (3-102)||(12744097-12744195)
chr4 (3-102)||(12745364-12745462)
chr4 (3-121)||(12745486-12745604)
chr4 (3-121)||(12747806-12747924)
chr4 (3-121)||(34570464-34570582)
chr4 (3-121)||(37740625-37740743)
chr4 (3-121)||(45687232-45687351)
chr4 (8-114)||(5207897-5208003)
chr4 (8-121)||(54883020-54883133)
chr4 (11-102)||(5370141-5370232)
chr4 (3-119)||(12119540-12119658)
chr4 (3-121)||(47038461-47038577)
chr4 (3-121)||(48143042-48143161)
chr4 (3-121)||(4587958-4588077)
chr4 (3-121)||(8665408-8665526)
chr4 (3-121)||(26175686-26175804)
chr4 (3-121)||(36463439-36463557)
chr4 (11-121)||(52082715-52082825)
chr4 (3-118)||(379383-379498)
chr4 (3-103)||(6655975-6656074)
chr4 (3-121)||(24969112-24969230)
chr4 (3-106)||(26699492-26699596)
chr4 (3-121)||(27417015-27417133)
chr4 (3-121)||(41639426-41639544)
chr4 (3-121)||(48893688-48893810)
chr4 (3-121)||(6542229-6542349)
chr4 (3-121)||(5429679-5429797)
chr4 (3-121)||(8648139-8648257)
chr4 (3-121)||(31474150-31474269)
chr4 (3-121)||(35662441-35662559)
chr4 (49-117)||(48142473-48142542)
chr4 (33-121)||(41639263-41639353)
chr4 (49-107)||(1983252-1983309)
chr4 (35-116)||(44967910-44967992)
chr4 (3-118)||(52467404-52467519)
chr4 (3-67)||(50673897-50673960)
chr4 (52-103)||(5349929-5349980)
chr4 (8-117)||(50262756-50262865)
chr4 (35-121)||(55085445-55085532)
[»] chr2 (39 HSPs)
chr2 (1-211)||(6266601-6266811)
chr2 (1-218)||(12647434-12647650)
chr2 (1-141)||(13656080-13656220)
chr2 (21-209)||(32289477-32289665)
chr2 (2-209)||(4484379-4484594)
chr2 (2-123)||(30833342-30833465)
chr2 (3-212)||(5723306-5723520)
chr2 (2-211)||(45099658-45099873)
chr2 (3-121)||(29867869-29867987)
chr2 (35-211)||(36205744-36205928)
chr2 (2-211)||(4503182-4503397)
chr2 (4-121)||(13121769-13121884)
chr2 (3-118)||(34139820-34139936)
chr2 (3-118)||(42362355-42362470)
chr2 (3-121)||(2334468-2334586)
chr2 (3-121)||(45726929-45727047)
chr2 (3-118)||(14633875-14633991)
chr2 (3-121)||(38312240-38312358)
chr2 (3-121)||(7815323-7815441)
chr2 (3-121)||(26353184-26353302)
chr2 (3-209)||(36988126-36988338)
chr2 (3-103)||(723794-723893)
chr2 (3-118)||(11690504-11690619)
chr2 (3-121)||(36773562-36773680)
chr2 (3-121)||(6595056-6595175)
chr2 (3-121)||(24398055-24398176)
chr2 (3-121)||(11067305-11067423)
chr2 (3-121)||(11151641-11151759)
chr2 (3-121)||(35446934-35447052)
chr2 (3-121)||(36318059-36318177)
chr2 (8-121)||(1631787-1631900)
chr2 (9-121)||(33162506-33162618)
chr2 (3-116)||(33648176-33648290)
chr2 (3-121)||(17057419-17057537)
chr2 (3-121)||(17085402-17085520)
chr2 (49-121)||(42288205-42288278)
chr2 (50-117)||(14202501-14202569)
chr2 (3-67)||(17490198-17490261)
chr2 (51-103)||(28770730-28770781)
[»] scaffold0565 (1 HSPs)
scaffold0565 (1-218)||(2652-2868)
[»] scaffold0137 (1 HSPs)
scaffold0137 (1-218)||(6177-6393)
[»] scaffold0674 (1 HSPs)
scaffold0674 (2-218)||(3775-3990)
[»] scaffold0002 (1 HSPs)
scaffold0002 (2-211)||(434436-434652)
[»] scaffold0491 (2 HSPs)
scaffold0491 (2-209)||(11210-11425)
scaffold0491 (2-123)||(8784-8907)
[»] scaffold1519 (1 HSPs)
scaffold1519 (2-211)||(820-1034)
[»] scaffold0016 (2 HSPs)
scaffold0016 (3-121)||(114602-114720)
scaffold0016 (40-103)||(102450-102513)
[»] scaffold0286 (2 HSPs)
scaffold0286 (2-121)||(11557-11676)
scaffold0286 (171-211)||(22247-22286)
[»] scaffold0466 (1 HSPs)
scaffold0466 (8-121)||(7327-7440)
[»] scaffold0176 (1 HSPs)
scaffold0176 (3-121)||(18054-18171)
[»] scaffold0066 (1 HSPs)
scaffold0066 (3-121)||(20465-20583)
[»] scaffold0014 (1 HSPs)
scaffold0014 (22-117)||(80351-80447)


Alignment Details
Target: chr6 (Bit Score: 209; Significance: 1e-114; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 2 - 218
Target Start/End: Complemental strand, 16554988 - 16554772
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctac 101  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16554988 actctccaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctac 16554889  T
Q  102 ccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaacc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16554888 ccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaacc 16554789  T
Q  202 ctagagttgcccctttg 218  Q
    |||||||||||||||||    
T  16554788 ctagagttgcccctttg 16554772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 2 - 218
Target Start/End: Complemental strand, 16631544 - 16631328
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctac 101  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16631544 actctccaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctac 16631445  T
Q  102 ccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaacc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16631444 ccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaacc 16631345  T
Q  202 ctagagttgcccctttg 218  Q
    |||||||||||||||||    
T  16631344 ctagagttgcccctttg 16631328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 2 - 225
Target Start/End: Complemental strand, 16653231 - 16653008
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctac 101  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16653231 actctccaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttttac 16653132  T
Q  102 ccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaacc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16653131 ccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaacc 16653032  T
Q  202 ctagagttgcccctttgcttctcc 225  Q
    ||||||||||||||||| ||||||    
T  16653031 ctagagttgcccctttgattctcc 16653008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 2 - 218
Target Start/End: Original strand, 16578567 - 16578783
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctac 101  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16578567 actctccaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgagcaaaccctaatttctac 16578666  T
Q  102 ccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaacc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16578667 ccttttcccaatctcaccaagacactcaatgattctctctttacaacgtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaacc 16578766  T
Q  202 ctagagttgcccctttg 218  Q
    |||||||||||||||||    
T  16578767 ctagagttgcccctttg 16578783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 2 - 218
Target Start/End: Complemental strand, 16616813 - 16616597
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctac 101  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16616813 actctccaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgagcaaaccctaatttctac 16616714  T
Q  102 ccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaacc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16616713 ccttttcccaatctcaccaagacactcaatgattctctctttacaacgtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaacc 16616614  T
Q  202 ctagagttgcccctttg 218  Q
    |||||||||||||||||    
T  16616613 ctagagttgcccctttg 16616597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 25421426 - 25421208
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttct 99  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25421426 tactctccaatccactatcaaatgagttctttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttct 25421327  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaa 199  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25421326 acccctttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaa 25421227  T
Q  200 ccctagagttgcccctttg 218  Q
    |||||||| | ||||||||    
T  25421226 ccctagagcttcccctttg 25421208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 27647980 - 27647775
Alignment:
Q  1 tactcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27647980 tactctccaatccactatcaaa-gagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttcta 27647882  T
Q  101 cccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaac 200  Q
    ||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27647881 cccttttcccaatctcaccaagacactcaatgattctctc--tacatggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaac 27647784  T
Q  201 cctagagtt 209  Q
    |||||||||    
T  27647783 cctagagtt 27647775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 6027367 - 6027151
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttct 99  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6027367 tactctccaatccactatcaaatgagttctttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttct 6027268  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaa 199  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6027267 acccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaa 6027170  T
Q  200 ccctagagttgcccctttg 218  Q
    |||||||| | ||||||||    
T  6027169 ccctagagcttcccctttg 6027151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 33342153 - 33342370
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttc 98  Q
    |||||| |||||||||||||||||||||||| ||||||||  ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  33342153 tactctccaatccactatcaaatgagttctttacaaaaggagtacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttc 33342252  T
Q  99 tacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaa 198  Q
    ||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33342253 tacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaa 33342350  T
Q  199 accctagagttgcccctttg 218  Q
    ||||||||| | ||||||||    
T  33342351 accctagagcttcccctttg 33342370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 34164978 - 34164761
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttc 98  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  34164978 tactctccaatccactatcaaatgagttctttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttc 34164879  T
Q  99 tacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaa 198  Q
    ||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  34164878 tacccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaa 34164781  T
Q  199 accctagagttgcccctttg 218  Q
    || |||||| | ||||||||    
T  34164780 actctagagcttcccctttg 34164761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 34167200 - 34166983
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttc 98  Q
    |||||| |||||||||||||||| ||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  34167200 tactctccaatccactatcaaataagttctttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttc 34167101  T
Q  99 tacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaa 198  Q
    ||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  34167100 tacccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaa 34167003  T
Q  199 accctagagttgcccctttg 218  Q
    || |||||| | ||||||||    
T  34167002 actctagagcttcccctttg 34166983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 209
Target Start/End: Complemental strand, 412214 - 412014
Alignment:
Q  9 aatccactatcaaatgagttcttacaaaagggatacaaaagg--ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccctt 105  Q
    ||||||||||||| |||||||||||||||| ||||||||| |  |||||||||||||| || || ||||||||||||||||| |||||||||||||| ||    
T  412214 aatccactatcaa-tgagttcttacaaaagagatacaaaaagagttacaagaaattagatttgataagttcacaatgaacaa-ccctaatttctaccttt 412117  T
Q  106 ttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaaccctag 205  Q
    |||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||| ||||||||||  |||||||||||| || |||||||||||    
T  412116 ttcccaatctcaccaagacactcaatgattttctctcttcaaggtgtttcccatgttttcaacccaagagaagctctaatcaaag-actctaaaccctag 412018  T
Q  206 agtt 209  Q
    ||||    
T  412017 agtt 412014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 13154035 - 13153893
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttc 98  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  13154035 tactctccaatccactatcaaatgagttctttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttc 13153936  T
Q  99 tacccttttcccaatctcaccaagacactcaatgattctctct 141  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  13153935 tacccctttcccaatctcaccaagacactcaatgattctctct 13153893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 2 - 209
Target Start/End: Original strand, 3072808 - 3073016
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg--ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttc 98  Q
    ||||| |||| ||||||||| |||||||||||||||| ||||||||| |  |||||||||||||| || |||||||||||||||||||| ||||||||||    
T  3072808 actctccaattcactatcaa-tgagttcttacaaaagagatacaaaaagagttacaagaaattagatttgacaagttcacaatgaacaa-ccctaatttc 3072905  T
Q  99 tacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaacccta 197  Q
    |||| |||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||  | ||||||||||  |||||||||||| || |||    
T  3072906 taccattttcccaatctcaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaag-actcta 3073004  T
Q  198 aaccctagagtt 209  Q
    ||||||||||||    
T  3073005 aaccctagagtt 3073016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 42 - 211
Target Start/End: Original strand, 6097528 - 6097699
Alignment:
Q  42 tacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctct 139  Q
    |||||||| ||||||||||||||| || ||||||||||||| |||||| || ||||||||||| |||| ||||||||||||| ||||||||||||| ||     
T  6097528 tacaaaagagttacaagaaattagatttgacaagttcacaaagaacaatcc-taatttctaccatttttccaatctcaccaaaacactcaatgattttca 6097626  T
Q  140 ctttacaaggtgtttcccatgttttctacccaa-gagatactctaatcaaagaaccctaaaccctagagttgc 211  Q
    ||   |||||||||| |||||||| | | |||| |||||||||||||||||||||||||||||||||||||||    
T  6097627 ctcaccaaggtgtttaccatgtttcccaaccaaagagatactctaatcaaagaaccctaaaccctagagttgc 6097699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 211
Target Start/End: Original strand, 2171581 - 2171796
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    ||||| |||||||||||||| |||||||||||||| | |||||||| ||||||||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  2171581 actctccaatccactatcaa-tgagttcttacaaa-gagatacaaagggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttcta 2171677  T
Q  101 cc-cttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaaga 191  Q
    ||  |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| |||||||||||||     
T  2171678 ccatttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaaactctaatcaaag- 2171776  T
Q  192 accctaaaccctagagttgc 211  Q
    ||||||||||||||||||||    
T  2171777 accctaaaccctagagttgc 2171796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 212
Target Start/End: Original strand, 31404725 - 31404940
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||| |||||| ||||||||||||    
T  31404725 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttcta 31404821  T
Q  101 cccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgtttt-ctacccaagagatactctaatcaaagaa 192  Q
    || |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||| | |||||||||| ||||||||||||  |    
T  31404822 ccattttcccaatctcactgatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgttttccaacccaagaga-actctaatcaaaaga 31404920  T
Q  193 ccctaaaccctagagttgcc 212  Q
    |||||||||||| |||||||    
T  31404921 ccctaaaccctaaagttgcc 31404940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 212
Target Start/End: Original strand, 5406250 - 5406464
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||| |||||| ||||||||||||    
T  5406250 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttcta 5406346  T
Q  101 cccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaa 192  Q
    || |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  | |||| ||||| ||||||||||||| |    
T  5406347 ccattttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccgagaga-actctaatcaaag-a 5406444  T
Q  193 ccctaaaccctagagttgcc 212  Q
    |||||||||||| |||||||    
T  5406445 ccctaaaccctaaagttgcc 5406464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 212
Target Start/End: Original strand, 5410575 - 5410789
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||| |||||| ||||||||||||    
T  5410575 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttcta 5410671  T
Q  101 cccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaa 192  Q
    || |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  | |||| ||||| ||||||||||||| |    
T  5410672 ccattttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccgagaga-actctaatcaaag-a 5410769  T
Q  193 ccctaaaccctagagttgcc 212  Q
    |||||||||||| |||||||    
T  5410770 ccctaaaccctaaagttgcc 5410789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 212
Target Start/End: Original strand, 5413444 - 5413658
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||| ||| |||||| ||||||||||||    
T  5413444 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagggttacaagaaattagctttgacaagttcgcaaagaacaa-ccctaatttcta 5413540  T
Q  101 cccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaa 192  Q
    || |||||||||||||||       ||||||||||||||||| || ||   ||| |||||| | ||||||  | |||| ||||| ||||||||||||| |    
T  5413541 cctttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaatgtgtttacaatgtttcccaacccgagaga-actctaatcaaag-a 5413638  T
Q  193 ccctaaaccctagagttgcc 212  Q
    |||||||||||| |||||||    
T  5413639 ccctaaaccctaaagttgcc 5413658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 2 - 211
Target Start/End: Original strand, 30834585 - 30834801
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||||||||||||| ||||||||| |||| | ||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||||    
T  30834585 actctccaatccactatcaa-tgagttcttccaaa-gagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttct 30834681  T
Q  100 accc--ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaa 189  Q
    ||||  |||||||||||||||       ||||||||||||||||| || ||   | |||||||| | |||||| || |||||||||| ||||||||||||    
T  30834682 acccttttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccgaggtgtttacaatgtttctcaacccaagaga-actctaatcaaa 30834780  T
Q  190 gaaccctaaaccctagagttgc 211  Q
    | ||| ||||||||| ||||||    
T  30834781 g-accataaaccctaaagttgc 30834801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 211
Target Start/End: Original strand, 16452378 - 16452594
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||||||||||||| ||||||||| |||| | ||||  ||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||||    
T  16452378 actctccaatccactatcaa-tgagttcttccaaa-gagatatgaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttct 16452474  T
Q  100 accc--ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaa 189  Q
    ||||  |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | |||||| || |||||||||| ||||||||||||    
T  16452475 acccttttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttctcaacccaagaga-actctaatcaaa 16452573  T
Q  190 gaaccctaaaccctagagttgc 211  Q
    | ||||||||| ||| ||||||    
T  16452574 g-accctaaactctaaagttgc 16452594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 2972989 - 2973107
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| ||||||| |||||||||||    
T  2972989 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaa-cctaatttcta 2973085  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  2973086 cccattttcccaatctcaccaa 2973107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 21589049 - 21588931
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| ||||||||||||||    
T  21589049 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 21588953  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  21588952 cccattttcccaatctcaccaa 21588931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 21593782 - 21593664
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| ||||||||||||||    
T  21593782 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 21593686  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  21593685 cccattttcccaatctcaccaa 21593664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 33160402 - 33160521
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||| ||||| |||||||||||||| | |||||||||| |||||||||||||||| ||||||||||||||| |||| ||| ||||||||||    
T  33160402 ctctccaatccaccatcaa-tgagttcttacaaa-gagatacaaaagagttacaagaaattagctttgacaagttcacaaagaac-aactctaatttcta 33160498  T
Q  101 cc--cttttcccaatctcaccaa 121  Q
    ||   ||||||||||||||||||    
T  33160499 cctttttttcccaatctcaccaa 33160521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 17758141 - 17758026
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| ||||||||||||||    
T  17758141 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 17758045  T
Q  101 ccc-ttttcccaatctcac 118  Q
    ||| |||||||||||||||    
T  17758044 cccattttcccaatctcac 17758026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 9183081 - 9183199
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||  |||| ||||||| |||| ||||||||||||||    
T  9183081 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaaattcacaaagaac-aaccctaatttcta 9183177  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||| ||||||||||||    
T  9183178 cccattttctcaatctcaccaa 9183199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 46 - 204
Target Start/End: Complemental strand, 16569110 - 16568953
Alignment:
Q  46 aaaggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaagacactcaatgattctctctt- 142  Q
    |||||||||||||||||||||| | |||| |||||| ||||||| |||||||||||||| ||||| ||||||   ||||||||||||||||| || |||     
T  16569110 aaaggttacaagaaattagcttaaacaagctcacaaagaacaaaacctaatttctacccattttctcaatct---caagacactcaatgattttcactta 16569014  T
Q  143 tacaaggtgtttcccatgttttc-tacccaagagatactctaatcaaagaaccctaaacccta 204  Q
      |||||||||| | |||||| |  |||||||||| ||||||||||||| ||||| |||||||    
T  16569013 cccaaggtgtttacaatgtttccaaacccaagaga-actctaatcaaag-acccttaacccta 16568953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 3808758 - 3808877
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaa--ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttct 99  Q
    |||| |||||||||||||| |||||||||||||| | |||||||||  |||||||||||||||| || | |||| |||||| |||||| |||||||||||    
T  3808758 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaatgggttacaagaaattagtttcaacaagctcacaaagaacaa-ccctaatttct 3808854  T
Q  100 accc-ttttcccaatctcaccaa 121  Q
    |||  ||||||||||||||||||    
T  3808855 acctattttcccaatctcaccaa 3808877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 22424876 - 22424995
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaa---ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttc 98  Q
    |||| |||||||||||  |||||||||||||||| | |||||||||   |||||||||||||||||||  ||||| |||||| |||| ||||||||||||    
T  22424876 ctctccaatccactat--aatgagttcttacaaa-gagatacaaaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttc 22424971  T
Q  99 taccc-ttttcccaatctcaccaa 121  Q
    ||||| |||| |||||||||||||    
T  22424972 tacccatttttccaatctcaccaa 22424995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 3038953 - 3039071
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||||| ||| ||||||||||||| | |||||||| || |||||||||||||||||  | ||| ||||||||||| ||||||||||||||    
T  3038953 ctctccaatccactattaaa-gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaaaaagctcacaatgaac-aaccctaatttcta 3039049  T
Q  101 cc-cttttcccaatctcaccaa 121  Q
    ||  ||||||||||||||||||    
T  3039050 ccaattttcccaatctcaccaa 3039071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 28137458 - 28137576
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| |  ||||||| || |||||||||||||||||  ||||| |||||| |||| ||||||||||||||    
T  28137458 ctctccaatccactatcaa-tgagttcttacaaa-gaaatacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttcta 28137554  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| |||||||| |||||||||    
T  28137555 cccattttcccattctcaccaa 28137576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 4045542 - 4045423
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||| ||   |||| |||| |||| | ||||||||||||||||| | |||| ||| || |||||||||||||||||||    
T  4045542 ctctccaatccactatcaa-tgagttatttacaaagagatataaaatgattacaagaaattagcttcaacaagctcataaagaacaaaccctaatttcta 4045444  T
Q  101 cccttttcccaatctcaccaa 121  Q
    || ||||||||||||| ||||    
T  4045443 ccattttcccaatctctccaa 4045423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 17763103 - 17762990
Alignment:
Q  8 caatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-t 104  Q
    |||||||||||||| ||||||||| ||||| | ||||||| | ||||||||||||||||||  ||||| |||||| |||| ||||||||||||||||| |    
T  17763103 caatccactatcaa-tgagttcttccaaaaag-atacaaatgagttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccat 17763007  T
Q  105 tttcccaatctcaccaa 121  Q
    |||| ||||||||||||    
T  17763006 tttctcaatctcaccaa 17762990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 119
Target Start/End: Original strand, 26830173 - 26830289
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| ||| ||||||||||    
T  26830173 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatggattacaagaaattagcttcaacaagctcacaaagaac-aactctaatttcta 26830269  T
Q  101 ccc-ttttcccaatctcacc 119  Q
    ||| |||| |||||||||||    
T  26830270 cccatttttccaatctcacc 26830289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 26954336 - 26954450
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||| | | |||||||||||||||||| | |||| |||||| |||||| ||||||||| ||    
T  26954336 ctctccaatccactatcaa-tgagttcttacaaa-gagatacagatgagttacaagaaattagcttcaacaagctcacaaagaacaa-ccctaatttata 26954432  T
Q  101 cccttttcccaatctcac 118  Q
    ||  ||||||||||||||    
T  26954433 ccaatttcccaatctcac 26954450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 5043745 - 5043630
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||| |||||||| |||||||||||||| | |||||||| | ||||||||||||||||||  ||||| |||||| ||||||| |||||||||||    
T  5043745 ctctccaatctactatcaa-tgagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaa-cctaatttcta 5043649  T
Q  101 c-ccttttcccaatctcac 118  Q
    | | ||||| |||||||||    
T  5043648 ctcattttctcaatctcac 5043630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 16567265 - 16567185
Alignment:
Q  54 caagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaagacactcaatgatt 135  Q
    |||||||||||||| | |||| ||||||  |||||| ||||||||||| || ||||||||||||||   |||||||||||||||    
T  16567265 caagaaattagcttaaacaagctcacaaaaaacaaaacctaatttctaaccattttcccaatctca---agacactcaatgatt 16567185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 33211235 - 33211353
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||| ||| ||||||||||||||||| | |||||||| | | |||||||||||| ||| | |||| |||||| |||||| || |||||||||    
T  33211235 ctctccaatccattat-aaatgagttcttacaaa-gagatacaaatgagctacaagaaattaacttcatcaagctcacaaagaacaa-ccataatttcta 33211331  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||  ||||||||||||||||||    
T  33211332 ccaattttcccaatctcaccaa 33211353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 206; Significance: 1e-113; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 9036536 - 9036320
Alignment:
Q  1 tactcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9036536 tactcttcaatccactatcaaa-gagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttcta 9036438  T
Q  101 cccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9036437 cccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaac 9036338  T
Q  201 cctagagttgcccctttg 218  Q
    ||||||||||||||||||    
T  9036337 cctagagttgcccctttg 9036320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 40282497 - 40282287
Alignment:
Q  1 tactcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||    
T  40282497 tactctccaatccactatcaaa-gagttcttacaaaagggatacaaaaggttacaagaaattagattagacaagttcacaatgaactaaccctaatttct 40282399  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaa 199  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  40282398 acccttttcccaatctcaccaagacactcaatgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaa 40282299  T
Q  200 ccctagagttgc 211  Q
    ||||||||||||    
T  40282298 ccctagagttgc 40282287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 44203752 - 44203536
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttct 99  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44203752 tactctccaatccactatcaaatgagttctttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttct 44203653  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaa 199  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44203652 acccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaa 44203555  T
Q  200 ccctagagttgcccctttg 218  Q
    |||||||| | ||||||||    
T  44203554 ccctagagcttcccctttg 44203536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 21054078 - 21053868
Alignment:
Q  1 tactcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||    
T  21054078 tactctccaatccactatcaaa-gagttcttacaaaagggatacaaaaggttgcaagaaattagatttgacaagttcacaatgaacaaaccctaatttct 21053980  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaa 199  Q
    || ||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  21053979 acacttttcccaatctcaccaagacactcaatgattttttctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaa 21053880  T
Q  200 ccctagagttgc 211  Q
    ||||||||||||    
T  21053879 ccctagagttgc 21053868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 9987321 - 9987112
Alignment:
Q  1 tactcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    |||||| |||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||| || |||||||||||||||||||| |||||||||||    
T  9987321 tactctccaatccactatcaa-tgagttcttgcaaaagggatacaaaaggttgcaagaaattagattagacaagttcacaatgaacaa-ccctaatttct 9987224  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaa 199  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9987223 acccttttcccaatctcaccaagacactcaatgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaa 9987124  T
Q  200 ccctagagttgc 211  Q
    ||||||||||||    
T  9987123 ccctagagttgc 9987112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 20622285 - 20622496
Alignment:
Q  1 tactcttcaatccactatcaaatgagttcttacaaaa--gggatacaaaaggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaattt 97  Q
    |||||| ||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||    
T  20622285 tactctccaatccactatcaaa-gagttcttacaaaaaagggatacaaaaggttacaagaaattagatttgacaagttcacaatgaacaa-ccctaattt 20622382  T
Q  98 ctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaacccta 197  Q
    |||||||||||||||||||||||||||| ||||||||| || || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20622383 ctacccttttcccaatctcaccaagacagtcaatgattttccctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaacccta 20622482  T
Q  198 aaccctagagttgc 211  Q
    ||||||||||||||    
T  20622483 aaccctagagttgc 20622496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 209
Target Start/End: Complemental strand, 51765516 - 51765300
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaa--ggttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttc 98  Q
    ||||| |||||||||||||| |||||||||||||||| |||||||||  ||||||||||||||||| ||||||||||||||| |    ||||||||||||    
T  51765516 actctccaatccactatcaa-tgagttcttacaaaagagatacaaaaggggttacaagaaattagctttgacaagttcacaaaggtacaaccctaatttc 51765418  T
Q  99 tacccttt--tcccaatctcac------caagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaag 190  Q
    ||||||||  ||||||||  ||      |||||||||||||||||  | ||   |||||||||| | |||||| | ||||||||||  ||||||||||||    
T  51765417 tacccttttctcccaatcaaaccaagaacaagacactcaatgatttacactcaccaaggtgtttacaatgtttccaacccaagagaagctctaatcaaag 51765318  T
Q  191 aaccctaaaccctagagtt 209  Q
     ||||||||||||||||||    
T  51765317 -accctaaaccctagagtt 51765300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 13316401 - 13316521
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||||||||||||| ||||||||| |||| | ||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||||    
T  13316401 actctccaatccactatcaa-tgagttcttccaaa-gagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttct 13316497  T
Q  100 accc-ttttcccaatctcaccaag 122  Q
    |||| |||||||||||||||||||    
T  13316498 accctttttcccaatctcaccaag 13316521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 211
Target Start/End: Complemental strand, 20762790 - 20762575
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| ||||||||||| || | ||||||||||| ||||||||||||||||| ||||||||||||| |||||| ||||||||||||    
T  20762790 ctctccaatccactatcaa-tgagttcttacgaa-gagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttcta 20762694  T
Q  101 ccc--ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaag 190  Q
    |||  ||||| |||||||||       ||||| ||||||||||| || ||   |||||||||| | ||||||  | |||||||||| |||||||||||||    
T  20762693 cccttttttctcaatctcaccaatgaacaagatactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag 20762595  T
Q  191 aaccctaaaccctagagttgc 211  Q
     ||||||||||||| ||||||    
T  20762594 -accctaaaccctaaagttgc 20762575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 37168416 - 37168297
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaa--ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    |||| |||||||||||||| |||||||||||||| | |||||||||  |||||||||||||||||||  ||||| |||||| |||| |||||||||||||    
T  37168416 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttct 37168320  T
Q  100 accc-ttttcccaatctcaccaa 121  Q
    |||| ||||||||||||||||||    
T  37168319 acccattttcccaatctcaccaa 37168297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 8550837 - 8550952
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| |||||||||| | ||||||||||||||||||  ||||| |||||| ||||||| |||||||||||    
T  8550837 ctctccaatccactatcaa-tgagttcttacaaa-gggatacaaatgagttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttcta 8550933  T
Q  101 ccc-ttttcccaatctcac 118  Q
    ||| |||||||||||||||    
T  8550934 cccattttcccaatctcac 8550952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 3156983 - 3156865
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||  |||||||||||| |||| ||||||||||||||    
T  3156983 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 3156887  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||| ||||||||||||    
T  3156886 cccattttctcaatctcaccaa 3156865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 28220276 - 28220394
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||  |||||||||||| |||| ||||||||||||||    
T  28220276 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 28220372  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| |||||| |||||||||||    
T  28220373 cccattttccgaatctcaccaa 28220394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 37503607 - 37503722
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctac 101  Q
    |||| |||||||||||||| |||||||||||||| | |||||||  |||||||||||||||||||  |||||||||||| |||| ||||||||||| |||    
T  37503607 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaa--ggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttttac 37503701  T
Q  102 cc-ttttcccaatctcaccaa 121  Q
    || ||||||||||||||||||    
T  37503702 ccattttcccaatctcaccaa 37503722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 44455278 - 44455160
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| ||||||||||||||| | ||||||| | ||||||||||||||| || | ||||||||||| |||||| ||||||||||||    
T  44455278 ctctccaatccactatcaa-tgagttcttacaaaaag-atacaaatgagttacaagaaattagtttcaacaagttcacaaagaacaa-ccctaatttcta 44455182  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  44455181 cccattttcccaatctcaccaa 44455160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 49918468 - 49918350
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||  |||||||||||| |||| ||||||||||||||    
T  49918468 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 49918372  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||| ||||||||||||    
T  49918371 cccattttctcaatctcaccaa 49918350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 50169260 - 50169378
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    ||||||||||||||||| ||||||| ||||| |||| |||||||| | |||||||||||||||| |||||||| |||||| |||| ||||||||||||||    
T  50169260 ctcttcaatccactatc-aatgagtacttac-aaagagatacaaatgagttacaagaaattagctttgacaagctcacaaagaac-aaccctaatttcta 50169356  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| |||| |||||||||||||    
T  50169357 cccatttttccaatctcaccaa 50169378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 834217 - 834332
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| |||||||||| || |||||||||||||||||  ||||| |||||| |||| ||||||||||||||    
T  834217 ctctccaatccactatcaa-tgagttcttacaaa-gggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttcta 834313  T
Q  101 -cccttttcccaatctcac 118  Q
     || |||||||||||||||    
T  834314 tccattttcccaatctcac 834332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 3189448 - 3189330
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| ||||||||||||||| | ||||||||| |||||| ||||||||||| | ||||||||||| |||||| ||||||||| ||    
T  3189448 ctctccaatccactatcaa-tgagttcttacaaaaag-atacaaaagagttacaggaaattagcttcaacaagttcacaaagaacaa-ccctaatttata 3189352  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| |||||| |||||||||||    
T  3189351 ccctttttccaaatctcaccaa 3189330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 3198265 - 3198147
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| ||||||||||||||| | ||||||||| |||||| ||||||||||| | ||||||||||| |||||| ||||||||| ||    
T  3198265 ctctccaatccactatcaa-tgagttcttacaaaaag-atacaaaagagttacaggaaattagcttcaacaagttcacaaagaacaa-ccctaatttata 3198169  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| |||||| |||||||||||    
T  3198168 ccctttttccaaatctcaccaa 3198147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 3207104 - 3206986
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| ||||||||||||||| | ||||||||| |||||| ||||||||||| | ||||||||||| |||||| ||||||||| ||    
T  3207104 ctctccaatccactatcaa-tgagttcttacaaaaag-atacaaaagagttacaggaaattagcttcaacaagttcacaaagaacaa-ccctaatttata 3207008  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| |||||| |||||||||||    
T  3207007 ccctttttccaaatctcaccaa 3206986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 13547139 - 13547257
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||||||| |||||| | |||| |||||| |||||| ||||||||||||    
T  13547139 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaaatagcttcaacaagctcacaaagaacaa-ccctaatttcta 13547235  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  13547236 cccattttcccaatctcaccaa 13547257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 28265604 - 28265722
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||||||||| ||||||||||||| | |||||||| || |||||||||||||||||  ||||| ||||||||||| ||||||||||||||    
T  28265604 ctctccaatccactatcaaa-gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaac-aaccctaatttcta 28265700  T
Q  101 cc-cttttcccaatctcaccaa 121  Q
    ||  ||||||||||||| ||||    
T  28265701 cctattttcccaatctcgccaa 28265722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 42298025 - 42298143
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||| | ||||||||||||||||||  ||||| ||||||  ||| ||||||||||||||    
T  42298025 ctcttcaatccactatc-aatgagttcttac-aaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaaaaac-aaccctaatttcta 42298121  T
Q  101 cc-cttttcccaatctcaccaa 121  Q
    ||  ||||||||||||||||||    
T  42298122 ccaattttcccaatctcaccaa 42298143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 47255390 - 47255508
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| ||||||||||||||    
T  47255390 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 47255486  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| |||| |||||||||||||    
T  47255487 cccatttttccaatctcaccaa 47255508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 7482280 - 7482399
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaa--ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    |||| |||| ||||||||| |||||||||||||| | |||||||||  |||||||||||||||||||  ||||| |||||| |||| |||||||||||||    
T  7482280 ctctccaattcactatcaa-tgagttcttacaaa-gagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttct 7482376  T
Q  100 accc-ttttcccaatctcaccaa 121  Q
    |||| ||| ||||||||||||||    
T  7482377 acccatttacccaatctcaccaa 7482399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 19754613 - 19754494
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaa-ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | ||||||||  |||||||||||||||||||  ||||| |||||| |||| ||||||||||||||    
T  19754613 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatcggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 19754517  T
Q  101 ccc--ttttcccaatctcaccaa 121  Q
    |||  ||||| ||||||||||||    
T  19754516 cccatttttctcaatctcaccaa 19754494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 37033122 - 37033241
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg--ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttct 99  Q
    |||| |||||||||||||| |||||||||||||| | ||| ||||| |  ||||||||||||||||| | |||| |||||| |||||| |||||||||||    
T  37033122 ctctccaatccactatcaa-tgagttcttacaaa-gagatgcaaaatggattacaagaaattagcttcaacaagctcacaaagaacaa-ccctaatttct 37033218  T
Q  100 accc-ttttcccaatctcaccaa 121  Q
    |||| ||||||||||||||||||    
T  37033219 acccattttcccaatctcaccaa 37033241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 23555314 - 23555433
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||||||||||||| |||||||||||||| | |||||||| | |||| |||||||||| || | ||||||||||| |||||| |||||||||||    
T  23555314 actctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgagttataagaaattagtttcaacaagttcacaaagaacaa-ccctaatttct 23555410  T
Q  100 accc-ttttcccaatctcaccaa 121  Q
    |||| |||| |||||||||||||    
T  23555411 acccatttttccaatctcaccaa 23555433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 1833640 - 1833522
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagcttgacaag-ttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| | |||||||||| ||||||| |  || ||||||| |||||| ||||||||||||    
T  1833640 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgagttacaagaatttagcttcaatagattcacaaagaacaa-ccctaatttcta 1833544  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  1833543 cccattttcccaatctcaccaa 1833522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 4552687 - 4552805
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||| |||||| |||||||||||||| |||||||||| || |||||||||||||||||  ||||| |||||| | ||||| |||||||||||    
T  4552687 ctctccaatccattatcaa-tgagttcttacaaa-gggatacaaaggggttacaagaaattagcttcaacaagctcacaaaggacaaa-cctaatttcta 4552783  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||| ||||||||||||    
T  4552784 cccattttctcaatctcaccaa 4552805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 11348816 - 11348698
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||| ||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| ||||||||||||||    
T  11348816 ctctccaatccactatcaa-tgagttcttagaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 11348720  T
Q  101 cc-cttttcccaatctcaccaa 121  Q
    ||  ||||||||||||||||||    
T  11348719 ccaattttcccaatctcaccaa 11348698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 13549050 - 13549168
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || ||||| |||||||| || | |||| |||||| |||||| ||||||||||||    
T  13549050 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacatgaaattaggtttaacaagctcacaaagaacaa-ccctaatttcta 13549146  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  13549147 cccattttcccaatctcaccaa 13549168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 28223471 - 28223589
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||  ||||||||| || || | |||| |||||||||    
T  28223471 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcagaaagatc-aaccataatttcta 28223567  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  28223568 cccattttcccaatctcaccaa 28223589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 31925757 - 31925875
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||  ||||| ||||||||||| | ||||||||||||    
T  31925757 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaac-atccctaatttcta 31925853  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| |||| ||| |||||||||    
T  31925854 cccatttttccactctcaccaa 31925875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 41361032 - 41360914
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    ||||| |||||||||||||  ||||||||||||| | |||||||| || |||||||||||||| || | |||| |||||| ||||||||| |||||||||    
T  41361032 ctctttaatccactatcaac-gagttcttacaaa-gagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaacc-taatttcta 41360936  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  41360935 cccattttcccaatctcaccaa 41360914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 45644404 - 45644523
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| ||||||||||| |||| |||||||| | ||| |||||||||||| |||||||| |||||| ||||||| | |||||||||    
T  45644404 ctctccaatccactatcaa-tgagttcttac-aaagagatacaaatgagttgcaagaaattagctttgacaagctcacaaagaacaaaacttaatttcta 45644501  T
Q  101 -cccttttcccaatctcaccaa 121  Q
     || ||||| ||||||||||||    
T  45644502 tccattttctcaatctcaccaa 45644523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 34603695 - 34603576
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaa--ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||||||||||| ||||| |||||||||||||| | |||| ||||  |||||||||||||||||||  ||||| |||||| |||| |||||||||||||    
T  34603695 ctcttcaatccaccatcaa-tgagttcttacaaa-gagataaaaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttct 34603599  T
Q  100 accc-ttttcccaatctcaccaa 121  Q
    |||| ||||  ||||||||||||    
T  34603598 acccattttttcaatctcaccaa 34603576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 47115290 - 47115171
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaa--ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    |||| |||||||||||||| || ||| ||||||| | |||||||||  |||||||||||||||||||  ||||| |||||| |||| |||||||||||||    
T  47115290 ctctccaatccactatcaa-tgggtttttacaaa-gagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttct 47115194  T
Q  100 acc-cttttcccaatctcaccaa 121  Q
    |||  ||||||||||||||||||    
T  47115193 accaattttcccaatctcaccaa 47115171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 196958 - 197073
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||| | |||||||||||||| |||  ||||| |||||| |||| ||||||||||||||    
T  196958 ctctccaatccactatcaa-tgagttcttac-aaagggatacaaatgagttacaagaaattaacttaaacaagctcacaaagaac-aaccctaatttcta 197054  T
Q  101 cc-cttttcccaatctcac 118  Q
    ||  ||||| |||||||||    
T  197055 ccaattttctcaatctcac 197073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 3847171 - 3847286
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| |||||||||| || |||||| || ||||||| | |||  |||||| |||||| ||||||||||||    
T  3847171 ctctccaatccactatcaa-tgagttcttacaaa-gggatacaaatgggttacaaaaatttagcttaaacaaactcacaaagaacaa-ccctaatttcta 3847267  T
Q  101 ccc-ttttcccaatctcac 118  Q
    ||| |||||||||||||||    
T  3847268 cccattttcccaatctcac 3847286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 29136365 - 29136247
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||| ||||| |||||||||||||| |  ||||||| || || |||||||||||||| | |||| |||||| |||||| ||||||||||||    
T  29136365 ctctccaatccacgatcaa-tgagttcttacaaa-gaaatacaaatgggttccaagaaattagcttcaacaagctcacaaagaacaa-ccctaatttcta 29136269  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  29136268 cccattttcccaatctcaccaa 29136247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 31659356 - 31659238
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| | |||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| | ||||||||||||    
T  31659356 ctctccaatccactatcaa-taagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-agccctaatttcta 31659260  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| |||| |||||||||||||    
T  31659259 cccatttttccaatctcaccaa 31659238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 50167225 - 50167343
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||| ||||||| | |||||||| || ||||||||||||||| |||||||| ||||||  ||| ||||||||||||||    
T  50167225 ctctccaatccactatcaa-tgagtttttacaaa-gagatacaaatgggttacaagaaattagctttgacaagctcacaaataac-aaccctaatttcta 50167321  T
Q  101 c-ccttttcccaatctcaccaa 121  Q
    |   ||||||||||||||||||    
T  50167322 ctaattttcccaatctcaccaa 50167343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 22079435 - 22079322
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaa-ggttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||| |||||| |||||||||   |||| ||||||||| ||||||||||||||||| || ||||| |||||| ||||||| | |||||||||    
T  22079435 ctctccaatccaatatcaa-tgagttctttacaaagagatacaaaatggttacaagaaattagctttaacaagctcacaaagaacaaa-cataatttcta 22079338  T
Q  101 cccttttcccaatctc 116  Q
    || |||| ||||||||    
T  22079337 ccatttttccaatctc 22079322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 37559918 - 37560037
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt--gacaagttcacaatgaacaaaccctaatttct 99  Q
    |||| |||| |||||||||  ||||||||||||| | |||||||| || |||||||||||||||||   |||||||||||| |||| ||| |||||||||    
T  37559918 ctctccaattcactatcaac-gagttcttacaaa-gagatacaaatgggttacaagaaattagctttcaacaagttcacaaagaac-aactctaatttct 37560014  T
Q  100 accc-ttttcccaatctcaccaa 121  Q
    |||| |||||| |||||||||||    
T  37560015 acccattttcctaatctcaccaa 37560037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 37879005 - 37879079
Alignment:
Q  48 aggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacc-cttttcccaatctcaccaa 121  Q
    ||||||||||||||||||||  ||||| |||||| |||| ||||||||||||||||  ||||||||||||||||||    
T  37879005 aggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacctattttcccaatctcaccaa 37879079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 8871143 - 8871213
Alignment:
Q  49 ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctcac 118  Q
    ||||||||||||||||||| | | |  |||||| ||||||||||||||||||||| |||||| ||||||||    
T  8871143 ggttacaagaaattagcttcaacgaactcacaaagaacaaaccctaatttctaccattttccaaatctcac 8871213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 15820425 - 15820326
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    ||||||||| ||||||||| |||||||||| ||||| |||||||| | ||||||||||||||||||  ||||| |||||| ||||||| |||||||| ||    
T  15820425 ctcttcaatgcactatcaa-tgagttctta-aaaagagatacaaatgtgttacaagaaattagcttcaacaagctcacaaagaacaaa-cctaattttta 15820329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 193729 - 193611
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||| ||||||| | |||||||| | ||||||||||||||||||  ||||| | | || |||| ||||||||||||||    
T  193729 ctctccaatccactatcaa-tgagttattacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctaataaagaac-aaccctaatttcta 193633  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||| ||||||||||||    
T  193632 cccattttctcaatctcaccaa 193611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 928043 - 928123
Alignment:
Q  21 aatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||||||| ||||||| | ||| ||||||| ||||||||||||||||| | |||| |||||| |||||||||||||||||||    
T  928043 aatgagtttttacaaa-gagatccaaaagggttacaagaaattagcttcaacaagctcacaaagaacaaaccctaatttcta 928123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 12318589 - 12318685
Alignment:
Q  21 aatgagttcttacaaaagggatacaaaa-ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctc 116  Q
    |||||||||||| | |||  |||||||| |||||||||||||||||||  ||||| || | ||||||||| |||||||||||||| ||||| ||||||    
T  12318589 aatgagttcttaaagaagacatacaaaatggttacaagaaattagcttcaacaagctctccatgaacaaa-cctaatttctacccatttccaaatctc 12318685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 48382505 - 48382441
Alignment:
Q  35 aaagggatacaaa-aggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttct 99  Q
    |||| |||||||| |||||||||||||||| ||| |||||||||||| || |||||||||||||||    
T  48382505 aaagtgatacaaataggttacaagaaattaactt-acaagttcacaaagatcaaaccctaatttct 48382441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 3460778 - 3460710
Alignment:
Q  41 atacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccctttt 107  Q
    |||||||||| |||||| |||||||||| | |||| |||||| |||||||| |||||||||||||||||    
T  3460778 atacaaaagggttacaataaattagcttcaacaagctcacaaagaacaaactctaatttctaccctttt 3460710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 30476501 - 30476614
Alignment:
Q  8 caatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-t 104  Q
    ||||||| |||||| |||||||||||||| | |||||||| || |||||| |||||| ||| | |||||||| || |||||| ||||||||||||||  |    
T  30476501 caatccagtatcaa-tgagttcttacaaa-gagatacaaatgggttacaataaattatcttcaacaagttcataaagaacaa-ccctaatttctacctat 30476597  T
Q  105 tttcccaatctcaccaa 121  Q
    |||||||||||||||||    
T  30476598 tttcccaatctcaccaa 30476614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 103
Target Start/End: Complemental strand, 32737015 - 32736952
Alignment:
Q  40 gatacaaa-aggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctaccc 103  Q
    |||||||| ||||||||| |||||||||| | ||||||| || ||||||||||||||||||||||    
T  32737015 gatacaaagaggttacaaaaaattagcttaa-aagttcataaagaacaaaccctaatttctaccc 32736952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 103
Target Start/End: Complemental strand, 35109556 - 35109493
Alignment:
Q  40 gatacaaa-aggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctaccc 103  Q
    |||||||| |||||||||||||||||||| | ||| |||||| ||||||||| ||||||||||||    
T  35109556 gatacaaataggttacaagaaattagcttaa-aagctcacaaagaacaaaccttaatttctaccc 35109493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 19752804 - 19752685
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaa-ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||| ||||||| |||||||||||||| | ||||||||  |||||||||||||||||||  ||||| || ||| |||| ||||||||||||||    
T  19752804 ctctccaatcctctatcaa-tgagttcttacaaa-gagatacaaatcggttacaagaaattagcttcaacaagctcgcaaagaac-aaccctaatttcta 19752708  T
Q  101 ccc--ttttcccaatctcaccaa 121  Q
    |||  ||| | ||||||||||||    
T  19752707 cccattttactcaatctcaccaa 19752685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 13138026 - 13138142
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaa-aggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    ||||||||||||||||| |||| |||||||| |||| ||| ||||  |||||||||||||||||||  ||||| |||||| |||| |  |||||||||||    
T  13138026 ctcttcaatccactatc-aatgtgttcttac-aaagagatgcaaatgggttacaagaaattagcttcaacaagctcacaaagaacga--cctaatttcta 13138121  T
Q  101 cccttttcccaatctcaccaa 121  Q
     || |||  ||||||||||||    
T  13138122 tccatttttcaatctcaccaa 13138142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 20344017 - 20343807
Alignment:
Q  1 tactcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20344017 tactctccaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttcta 20343918  T
Q  101 cccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20343917 cccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaac 20343818  T
Q  201 cctagagttgc 211  Q
    |||||||||||    
T  20343817 cctagagttgc 20343807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 6592388 - 6592604
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttct 99  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6592388 tactctccaatccactatcaaatgagttctttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttct 6592487  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaa 199  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6592488 acccatttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaa 6592585  T
Q  200 ccctagagttgcccctttg 218  Q
    |||||||| | ||||||||    
T  6592586 ccctagagcttcccctttg 6592604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 6594606 - 6594822
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttct 99  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6594606 tactctccaatccactatcaaatgagttctttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttct 6594705  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaa 199  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6594706 acccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaa 6594803  T
Q  200 ccctagagttgcccctttg 218  Q
    |||||||| | ||||||||    
T  6594804 ccctagagcttcccctttg 6594822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 18388808 - 18389024
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttct 99  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18388808 tactctccaatccactatcaaatgagttctttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttct 18388907  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaa 199  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18388908 acccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaa 18389005  T
Q  200 ccctagagttgcccctttg 218  Q
    |||||||| | ||||||||    
T  18389006 ccctagagcttcccctttg 18389024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 18392244 - 18392460
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttct 99  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18392244 tactctccaatccactatcaaatgagttctttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttct 18392343  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaa 199  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18392344 acccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaa 18392441  T
Q  200 ccctagagttgcccctttg 218  Q
    |||||||| | ||||||||    
T  18392442 ccctagagcttcccctttg 18392460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 32060370 - 32060579
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaa--gggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaattt 97  Q
    |||||| |||||||||||||||||||||||| ||||||  ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32060370 tactctccaatccactatcaaatgagttctttacaaaaaggggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaattt 32060469  T
Q  98 ctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaacccta 197  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32060470 ctacccctttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaacccta 32060569  T
Q  198 aaccctagag 207  Q
    ||||||||||    
T  32060570 aaccctagag 32060579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 24789961 - 24789751
Alignment:
Q  1 tactcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    |||||| ||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  24789961 tactctccaatccactatcaaa-gagtttttacaaaagggatacaaaatgttacaagaaattagctttgacaagttcacaatgaacaaaccctaattttt 24789863  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaa 199  Q
    |||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24789862 acccttttcccaatcttaccaagacactcaatgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaa 24789763  T
Q  200 ccctagagttgc 211  Q
    ||||||||||||    
T  24789762 ccctagagttgc 24789751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 51 - 218
Target Start/End: Original strand, 1562103 - 1562268
Alignment:
Q  51 ttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggt 150  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  1562103 ttacaagaaattagcttgacaagttcactatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctc--tacaaggt 1562200  T
Q  151 gtttcccatgttttctacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttg 218  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  1562201 gtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttcccctttg 1562268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 2 - 209
Target Start/End: Original strand, 43504203 - 43504411
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg--ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttc 98  Q
    ||||| |||| ||||||||| |||||||||||||||| ||||||||| |  |||||||||||||| || |||||||||||||||||||| ||||||||||    
T  43504203 actctccaattcactatcaa-tgagttcttacaaaagagatacaaaaagagttacaagaaattagatttgacaagttcacaatgaacaa-ccctaatttc 43504300  T
Q  99 tacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaacccta 197  Q
    |||||||||||||||||||||||||||||| |||||| ||||| | |||||||||||||||||||  | | ||||||||  |||||||||||| || |||    
T  43504301 tacccttttcccaatctcaccaagacactcgatgattttctctcttcaaggtgtttcccatgtttcccaagccaagagaagctctaatcaaag-actcta 43504399  T
Q  198 aaccctagagtt 209  Q
    ||||||||||||    
T  43504400 aaccctagagtt 43504411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 2 - 209
Target Start/End: Complemental strand, 39731488 - 39731281
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagct-tgacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||| | |||||||||||||| |||||| |||||||||||    
T  39731488 actctccaatccactatcaa-tgagttcttacaaaagagatacaaaagagttacaagaaattagatctgacaagttcacaaagaacaa-ccctaatttct 39731391  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaaccctaa 198  Q
    |||||||| ||||||||||||||||||||||||||| || ||   |||||||||| | ||||||  | ||||||||||  |||||||||||| |||||||    
T  39731390 accctttttccaatctcaccaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaagctctaatcaaag-accctaa 39731292  T
Q  199 accctagagtt 209  Q
    |||||||||||    
T  39731291 accctagagtt 39731281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 211
Target Start/End: Original strand, 25767009 - 25767219
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg--ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttc 98  Q
    ||||| |||||||||||||| ||||||||| |||||| |||||||||||  ||||||||||||||||| ||||||||||||| |||||| ||||||||||    
T  25767009 actctccaatccactatcaa-tgagttctt-caaaagagatacaaaaggggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttc 25767105  T
Q  99 tacccttttc-ccaatctcac----caagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaac 193  Q
    |||||||||  |||||||||     ||||||||||||||||| || ||   |||||||||| | |||||| | |   |||||| |||||||||||||| |    
T  25767106 tacccttttttccaatctcaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttccca---aagagaaactctaatcaaaga-c 25767201  T
Q  194 cctaaaccctagagttgc 211  Q
    ||||||||||||||||||    
T  25767202 cctaaaccctagagttgc 25767219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 211
Target Start/End: Complemental strand, 35854033 - 35853818
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||||||||||||| |||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||||    
T  35854033 actctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttct 35853937  T
Q  100 accc-ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaag 190  Q
    |||| |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| |||| ||||||||    
T  35853936 accctttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actcaaatcaaag 35853838  T
Q  191 aaccctaaaccctagagttgc 211  Q
     ||||||||||||| ||||||    
T  35853837 -accctaaaccctaaagttgc 35853818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 211
Target Start/End: Complemental strand, 48408923 - 48408705
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg--ttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttc 98  Q
    ||||| |||||||||||||| |||||| || |||||| |||||||||||  ||||||||||||||| |||||||||| |||| |||| |||  |||||||    
T  48408923 actctccaatccactatcaa-tgagttatttcaaaagagatacaaaaggggttacaagaaattagctttgacaagtttacaaagaac-aacattaatttc 48408826  T
Q  99 taccc-ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaa 189  Q
    ||||| |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| ||||||||||||    
T  48408825 taccctttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaaactctaatcaaa 48408726  T
Q  190 gaaccctaaaccctagagttgc 211  Q
    | ||||||||||||||||||||    
T  48408725 g-accctaaaccctagagttgc 48408705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 210
Target Start/End: Complemental strand, 29991171 - 29990959
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||| ||| ||| | ||||||||||| ||||||||||||||||| |||||||||||||  ||||| ||||||||||||    
T  29991171 ctctccaatccactatcaa-tgagttattagaaa-gagatacaaaagggttacaagaaattagctttgacaagttcacaaataacaa-ccctaatttcta 29991075  T
Q  101 cccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaa 192  Q
     |||||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| ||||||||||||| |    
T  29991074 tccttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-a 29990977  T
Q  193 ccctaaaccctagagttg 210  Q
    |||||||||||| |||||    
T  29990976 ccctaaaccctaaagttg 29990959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 14069883 - 14070001
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || ||||||||||||||||| ||||||||||||| |||||| ||||||||||||    
T  14069883 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttcta 14069979  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  14069980 ccctttttcccaatctcaccaa 14070001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 14379911 - 14380029
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || ||||||||||||||||| ||||||||||||| |||||| ||||||||||||    
T  14379911 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttcta 14380007  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  14380008 ccctttttcccaatctcaccaa 14380029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 41317484 - 41317602
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| |||||||||| || ||||||||||||||||| |||||| |||||| |||||| ||||||||||||    
T  41317484 ctctccaatccactatcaa-tgagttcttacaaa-gggatacaaatggattacaagaaattagctttgacaagctcacaaagaacaa-ccctaatttcta 41317580  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||  ||||||||||||||||||    
T  41317581 ccaattttcccaatctcaccaa 41317602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 211
Target Start/End: Complemental strand, 4178888 - 4178678
Alignment:
Q  6 ttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttctacc- 102  Q
    |||||||||||||||| |||||||||   |||| ||||||||||| ||||||||||||||| ||  ||||||||||| |||| ||||||||||||||||     
T  4178888 ttcaatccactatcaa-tgagttcttc--aaagagatacaaaagggttacaagaaattagctttcccaagttcacaaagaac-aaccctaatttctacct 4178793  T
Q  103 cttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaacc 194  Q
     |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| ||||||||||||| |||    
T  4178792 tttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-acc 4178695  T
Q  195 ctaaaccctagagttgc 211  Q
    |||||||||| ||||||    
T  4178694 ctaaaccctaaagttgc 4178678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 27347935 - 27347817
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||  |||||||||||| |||| || |||||||||||    
T  27347935 ctctgcaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aatcctaatttcta 27347839  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  27347838 cccattttcccaatctcaccaa 27347817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 30024782 - 30024900
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||||||||| ||||||||||||| | |||||||| || |||||||||||||||||  ||||| ||||||||||| ||||||||||||||    
T  30024782 ctctccaatccactatcaaa-gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaac-aaccctaatttcta 30024878  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||| ||||||||||||    
T  30024879 cccattttctcaatctcaccaa 30024900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 34310766 - 34310884
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| ||||||||||||||| | ||||||| | ||||||||||||||||||  |||| ||||||| |||| ||||||||||||||    
T  34310766 ctctccaatccactatcaa-tgagttcttacaaaaag-atacaaatgtgttacaagaaattagcttcaacaatttcacaaagaac-aaccctaatttcta 34310862  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  34310863 cccattttcccaatctcaccaa 34310884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 47673993 - 47674111
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||  |||||||||||| |||| ||||||||||||||    
T  47673993 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 47674089  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||| ||||||||||||    
T  47674090 cccattttctcaatctcaccaa 47674111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 48491697 - 48491579
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| ||||||||| |||| | |||||||| || |||||||||||||||||  |||||||||||| |||| ||||||||||||||    
T  48491697 ctctccaatccactatcaa-tgagttctttcaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 48491601  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  48491600 cccattttcccaatctcaccaa 48491579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 18126757 - 18126644
Alignment:
Q  8 caatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttg-acaagttcacaatgaacaaaccctaatttctac-cct 104  Q
    |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||| |||||||||||| |||| ||||||||||||||| | |    
T  18126757 caatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttgaacaagttcacaaagaac-aaccctaatttctacacat 18126661  T
Q  105 tttcccaatctcaccaa 121  Q
    ||| |||||||||||||    
T  18126660 ttttccaatctcaccaa 18126644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 29608850 - 29608737
Alignment:
Q  8 caatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-t 104  Q
    |||||||||||||| |||||||||||||| | |||||||| | |||||||||||||||||| | |||| |||||| |||||| ||||||||||||||| |    
T  29608850 caatccactatcaa-tgagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaa-ccctaatttctacccat 29608754  T
Q  105 tttcccaatctcaccaa 121  Q
    |||||||||||||||||    
T  29608753 tttcccaatctcaccaa 29608737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 2361028 - 2361140
Alignment:
Q  9 aatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-tt 105  Q
    ||||||||||||| |||||||||||||| | |||||||| | ||||||||||||||||||  ||||| |||||| |||| ||||||||||||||||| ||    
T  2361028 aatccactatcaa-tgagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccatt 2361124  T
Q  106 ttcccaatctcaccaa 121  Q
    ||||||||||||||||    
T  2361125 ttcccaatctcaccaa 2361140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 23555158 - 23555039
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| ||||||||||||||  || |||||||| |||||||||||||||||| | ||||||||||| |||||| ||||||||||||    
T  23555158 ctctccaatccactatcaa-tgagttcttacaaagagg-tacaaaagtgttacaagaaattagcttcaacaagttcacaaagaacaa-ccctaatttcta 23555062  T
Q  101 ccctttt--cccaatctcaccaa 121  Q
    || ||||  ||||||||||||||    
T  23555061 ccattttttcccaatctcaccaa 23555039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 38671272 - 38671387
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||| | ||||||| ||||||||||  ||||| |||||| |||| ||||||||||||||    
T  38671272 ctcttcaatccactatc-aatgagttcttac-aaagtgatacaaatgtgttacaataaattagcttaaacaagctcacaaagaac-aaccctaatttcta 38671368  T
Q  101 ccc-ttttcccaatctcac 118  Q
    ||| |||||||||||||||    
T  38671369 cccattttcccaatctcac 38671387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 4586279 - 4586161
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||| ||| || |||||| |||||||||| | ||||||||||| |||||| ||||||||||||    
T  4586279 ctctccaatccactatcaa-tgagttcttacaaa-gagataaaaatgggttacaaaaaattagcttcaacaagttcacaaagaacaa-ccctaatttcta 4586183  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  4586182 cccattttcccaatctcaccaa 4586161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 209
Target Start/End: Complemental strand, 19502296 - 19502083
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||||| |||||||||||||||| |||||||| ||||||  ||| |||| |||||||||    
T  19502296 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagagttacaagaaattagctttgacaagctcacaaaaaac-aaccttaatttcta 19502200  T
Q  101 ccc--ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaag 190  Q
     ||  ||||| |||||||||       |||||||||||||||||||| ||   |||||||||| | ||||||  | |||||||||| |||||||||||||    
T  19502199 accttttttcgcaatctcaccactgaacaagacactcaatgattctcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag 19502101  T
Q  191 aaccctaaaccctagagtt 209  Q
     ||||| ||||||| ||||    
T  19502100 -accctcaaccctaaagtt 19502083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 22270091 - 22269973
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| | |||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| ||||||||||||||    
T  22270091 ctctccaatccactatcaa-tcagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 22269995  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  22269994 cccattttcccaatctcaccaa 22269973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 191
Target Start/End: Complemental strand, 25615965 - 25615785
Alignment:
Q  9 aatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-tt 105  Q
    ||||||||||||| ||||||||||||||| | ||||||| || ||||||||||||||||| | ||||  ||||  ||||||||| |||||||||||| ||    
T  25615965 aatccactatcaa-tgagttcttacaaaatg-atacaaatgggttacaagaaattagcttaaacaagcgcacatagaacaaacc-taatttctacccatt 25615869  T
Q  106 ttcccaatctcaccaagacactcaatgattctctct-ttacaaggtgtttcccatgtttt-ctacccaagagatactctaatcaaaga 191  Q
    ||||||||||||   ||||||||||||||| |||||    |||||||||| | ||||||| | |||||||||| ||||||||||||||    
T  25615868 ttcccaatctca---agacactcaatgattttctctcacccaaggtgtttacaatgttttccaacccaagaga-actctaatcaaaga 25615785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 41649061 - 41649175
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctac 101  Q
    |||| |||||||||||||| |||||||||||||| |||||||||| || ||||||||||||||||  ||||| |||||| ||||||| ||||||||||||    
T  41649061 ctctccaatccactatcaa-tgagttcttacaaa-gggatacaaatgggttacaagaaattagctaaacaagctcacaaagaacaaa-cctaatttctac 41649157  T
Q  102 c-cttttcccaatctcac 118  Q
    |  |||| ||||||||||    
T  41649158 caatttttccaatctcac 41649175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 8359366 - 8359485
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaa--ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttct 99  Q
    |||| |||||||||||||| |||||||||||||| | |||||||||  |||||||||||||||| || | |||| |||||| ||| ||||||||||||||    
T  8359366 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaatgggttacaagaaattagtttaaacaagctcacaaagaa-aaaccctaatttct 8359462  T
Q  100 accc-ttttcccaatctcaccaa 121  Q
    |||| ||||||||||||| ||||    
T  8359463 acccattttcccaatctccccaa 8359485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 4253595 - 4253697
Alignment:
Q  21 aatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctcac 118  Q
    ||||||||||| | |||| |||| |||||| ||||| ||||||||||| | |||| |||||| ||||||||||||||||||||| |||| ||||| ||||    
T  4253595 aatgagttctttccaaagagatataaaagggttacatgaaattagcttcaacaagctcacaaagaacaaaccctaatttctaccattttaccaatttcac 4253694  T
Q  119 caa 121  Q
    |||    
T  4253695 caa 4253697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 8153460 - 8153342
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||| ||||||| | |||||||| | |||||||||||||||||| |||||  |||||| |||||| ||||||||||||    
T  8153460 ctctccaatccactatcaa-tgagttattacaaa-gagatacaaatgagttacaagaaattagctttgacaatctcacaaagaacaa-ccctaatttcta 8153364  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    | | ||||||||||||||||||    
T  8153363 ctcattttcccaatctcaccaa 8153342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 49 - 121
Target Start/End: Complemental strand, 23344048 - 23343975
Alignment:
Q  49 ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 121  Q
    ||||||||||||||||||| | |||| |||||| ||| ||||| |||||||||||||||||| |||||||||||    
T  23344048 ggttacaagaaattagcttcaacaagctcacaaagaataaaccttaatttctacccttttccaaatctcaccaa 23343975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 50 - 121
Target Start/End: Original strand, 24525992 - 24526065
Alignment:
Q  50 gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 121  Q
    |||||||||||||||||| |||||| |||||| ||||||| |||||||||||||| |||||||||| |||||||    
T  24525992 gttacaagaaattagctttgacaagctcacaaagaacaaaacctaatttctacccattttcccaatttcaccaa 24526065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 26417434 - 26417316
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||||||||  ||||||||||||| | |||||||| || ||||||||||||| ||| | |||| |||||| |||||| ||||||||||||    
T  26417434 ctctccaatccactatcaac-gagttcttacaaa-gagatacaaatgggttacaagaaattatcttcaacaagctcacaaagaacaa-ccctaatttcta 26417338  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  26417337 cccattttcccaatctcaccaa 26417316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1560714 - 1560757
Alignment:
Q  1 tactcttcaatccactatcaaatgagttcttacaaaagggatac 44  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  1560714 tactctccaatccactatcaaatgagttcttacaaaagggatac 1560757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 36146464 - 36146576
Alignment:
Q  9 aatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-tt 105  Q
    ||||||||||||| |||||||||||||| | |||||||| || ||||| ||||||||||| | |||| ||||||  ||||||| ||||||||||||| ||    
T  36146464 aatccactatcaa-tgagttcttacaaa-gagatacaaatgggttaca-gaaattagcttcaacaagctcacaaataacaaactctaatttctacccatt 36146560  T
Q  106 ttcccaatctcaccaa 121  Q
    ||||||||||||||||    
T  36146561 ttcccaatctcaccaa 36146576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 4508756 - 4508874
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||| |||| |||||||||||||| | |||||||| || |||||||||||||||||  | ||| |||||| |||| ||||||||||||||    
T  4508756 ctctccaatccactctcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaataagctcacaaagaac-aaccctaatttcta 4508852  T
Q  101 c-ccttttcccaatctcaccaa 121  Q
    | | ||||||||||||||||||    
T  4508853 ctcattttcccaatctcaccaa 4508874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 6432089 - 6431971
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||||||||  ||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| || |||||||||||    
T  6432089 ctctccaatccactatcaac-gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aatcctaatttcta 6431993  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| |||||||||||| |||||    
T  6431992 cccattttcccaatctaaccaa 6431971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 23565111 - 23565210
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||| || | |||| |||||| ||||||  |||||||||||    
T  23565111 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagagttacaagaaattagtttcaacaagctcacaaagaacaagacctaatttcta 23565208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 31733019 - 31733137
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||| |||||| |||||||||||||| | |||||||| || ||||||||||||||||| | |||| |||||| |||| ||||||||||||||    
T  31733019 ctctccaatccagtatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaccaagctcacaaagaac-aaccctaatttcta 31733115  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||| || |||||||||    
T  31733116 cccattttctcagtctcaccaa 31733137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 47676205 - 47676304
Alignment:
Q  23 tgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcacc 119  Q
    |||||||||||||| | |||||||| || |||||||||||||||||  |||| ||||||| |||| ||||||||||||||||| ||||| ||||||||||    
T  47676205 tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaaattcacaaagaac-aaccctaatttctacccattttctcaatctcacc 47676302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 48599384 - 48599502
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||| |||| |||| | |||||||| | ||||||||||||||||||  ||||| |||||| |||| ||||||||||||||    
T  48599384 ctctccaatccactatcaa-tgagctcttccaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 48599480  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| |||||||||| |||||||    
T  48599481 cccattttcccaatatcaccaa 48599502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 496033 - 496148
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||| ||| | |||||||| || || |||||||||||||| | |||| |||||| |||| | ||||||||||||    
T  496033 ctctccaatccactatcaa-tgagttcttataaa-gagatacaaatgggttgcaagaaattagcttcaacaagctcacaaagaacta-ccctaatttcta 496129  T
Q  101 ccc-ttttcccaatctcac 118  Q
    ||| |||||||||||||||    
T  496130 cccattttcccaatctcac 496148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 121
Target Start/End: Original strand, 12097954 - 12098027
Alignment:
Q  49 ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 121  Q
    ||||||||||||||| ||| | |||| ||||||||||||| ||||||||||||||| |||||||||||| |||||    
T  12097954 ggttacaagaaattaacttcaacaagctcacaatgaacaa-ccctaatttctacccattttcccaatctaaccaa 12098027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 22328471 - 22328556
Alignment:
Q  35 aaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccctt--ttcccaatctc 116  Q
    |||| |||||||||| ||||||||||||||||||  ||||| |||||| |||||||| |||||||||| ||||  |||||||||||    
T  22328471 aaagagatacaaaagagttacaagaaattagcttcaacaagctcacaaagaacaaactctaatttctaacctttcttcccaatctc 22328556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 31105443 - 31105558
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||| ||||| ||||||||||||||| | ||||||| || |||||||||||||||||  ||||| |||||| ||| |||  ||||||||||    
T  31105443 ctctccaatccaccatcaa-tgagttcttacaaaaag-atacaaatgggttacaagaaattagcttcaacaagctcacaaagaa-aaaatctaatttcta 31105539  T
Q  101 ccc-ttttcccaatctcac 118  Q
    ||| |||||||||||||||    
T  31105540 cccattttcccaatctcac 31105558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 121
Target Start/End: Complemental strand, 48489504 - 48489431
Alignment:
Q  49 ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 121  Q
    |||||||||||||||||||  |||||||  ||| |||| ||||||||||||||||| ||||||||||||||||||    
T  48489504 ggttacaagaaattagcttcaacaagttttcaaagaac-aaccctaatttctacccattttcccaatctcaccaa 48489431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 3259113 - 3258995
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| || ||| ||||||| | |||||||| | ||||||| |||||||||| | |||| |||||| |||||| ||||| ||||||    
T  3259113 ctctccaatccactatcaa-tgggtttttacaaa-gagatacaaatgagttacaataaattagcttaaacaagctcacaaagaacaa-ccctagtttcta 3259017  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  3259016 cccattttcccaatctcaccaa 3258995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 43864362 - 43864244
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| | |||| ||||||| | |||||||| || ||||| ||||||||||| | ||||||||||| |||||| ||||||||||||    
T  43864362 ctctccaatccactatcaatt-agtttttacaaa-gagatacaaatgggttacaggaaattagcttcaacaagttcacaaagaacaa-ccctaatttcta 43864266  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    |||  ||| |||||||||||||    
T  43864265 cccacttttccaatctcaccaa 43864244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 4510599 - 4510716
Alignment:
Q  4 tcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctac 101  Q
    |||||||||||||||||| |||||||||| ||| | |||||||| || |||||||||||||||||  | ||  |||||| |||| |||| ||||||||||    
T  4510599 tcttcaatccactatcaa-tgagttcttataaa-gagatacaaatgggttacaagaaattagcttcaataaactcacaaagaac-aaccttaatttctac 4510695  T
Q  102 cc-ttttcccaatctcaccaa 121  Q
    || |||||| |||||||||||    
T  4510696 ccattttccaaatctcaccaa 4510716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 4512441 - 4512558
Alignment:
Q  4 tcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctac 101  Q
    |||||||||||||||||| |||||||||| ||| | |||||||| || |||||||||||||||||  | ||  |||||| |||| |||| ||||||||||    
T  4512441 tcttcaatccactatcaa-tgagttcttataaa-gagatacaaatgggttacaagaaattagcttcaataaactcacaaagaac-aaccttaatttctac 4512537  T
Q  102 cc-ttttcccaatctcaccaa 121  Q
    || |||||| |||||||||||    
T  4512538 ccattttccaaatctcaccaa 4512558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 31518896 - 31518795
Alignment:
Q  21 aatgagttcttacaaaagggatacaaaag-gttacaagaaattagcttgac-aagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctca 117  Q
    |||||||||||||||| | |||||||| | ||||||||||| |||||| |  ||| |||||| ||||||||| |||||||||||  ||||||||||||||    
T  31518896 aatgagttcttacaaa-gagatacaaatgagttacaagaaactagcttcaataagctcacaaagaacaaacc-taatttctacctattttcccaatctca 31518799  T
Q  118 ccaa 121  Q
    ||||    
T  31518798 ccaa 31518795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 1113775 - 1113660
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaa-aggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||| |||||||| ||||||||||| |||| ||||||||  ||||| |||||||||||||  ||||| |||||| |||| ||||||||||||||    
T  1113775 ctctccaatctactatcaa-tgagttcttac-aaagagatacaaatgggttataagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 1113679  T
Q  101 -cccttttcccaatctcac 118  Q
     || ||||| |||||||||    
T  1113678 tccattttctcaatctcac 1113660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 2390400 - 2390301
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||||| | ||||||| ||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| ||||||||||||||    
T  2390400 ctctccaatccactat-atatgagttattacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 2390304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 2759252 - 2759339
Alignment:
Q  8 caatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatt 96  Q
    |||||||||||||| |||||||||||||| | |||| ||| | ||||||||||||||||||  |||||||||||| |||| ||||||||||    
T  2759252 caatccactatcaa-tgagttcttacaaa-gagatataaatgagttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatt 2759339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 24514934 - 24515025
Alignment:
Q  119 caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaaccctaaaccctagagttgc 211  Q
    ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| ||||||||||||| ||||||||||||| ||||||    
T  24514934 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctaaaccctaaagttgc 24515025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 28617234 - 28617182
Alignment:
Q  49 ggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctacc 102  Q
    ||||||||||||||||||| | ||| |||||| ||||||| |||||||||||||    
T  28617234 ggttacaagaaattagcttaa-aagctcacaaagaacaaaacctaatttctacc 28617182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 32358104 - 32358167
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt 67  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||    
T  32358104 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagctt 32358167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 36574565 - 36574683
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||| |||||||||| |||||||||   |||| |||| |||||| |||||||||||||||||  ||||  |||||| ||||||| | |||||||||    
T  36574565 ctctccaaaccactatcaa-tgagttctttacaaagagatataaaagggttacaagaaattagcttcaacaaactcacaaagaacaaatcttaatttcta 36574663  T
Q  101 cccttttcccaatctcaccaa 121  Q
     ||||| ||||||||| ||||    
T  36574664 -cctttccccaatctctccaa 36574683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 202; Significance: 1e-110; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 10593378 - 10593161
Alignment:
Q  1 tactcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10593378 tactctccaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttcta 10593279  T
Q  101 cccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaac 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10593278 cccttctcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaac 10593179  T
Q  201 cctagagttgcccctttg 218  Q
    ||||||||| ||||||||    
T  10593178 cctagagttccccctttg 10593161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 25078241 - 25078023
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttct 99  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25078241 tactctccaatccactatcaaatgagttctttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttct 25078142  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaa 199  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25078141 acccctttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaa 25078042  T
Q  200 ccctagagttgcccctttg 218  Q
    |||||||| | ||||||||    
T  25078041 ccctagagcttcccctttg 25078023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 25136210 - 25135992
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttct 99  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25136210 tactctccaatccactatcaaatgagttctttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttct 25136111  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaa 199  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25136110 acccctttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaa 25136011  T
Q  200 ccctagagttgcccctttg 218  Q
    |||||||| | ||||||||    
T  25136010 ccctagagcttcccctttg 25135992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 29751208 - 29751418
Alignment:
Q  1 tactcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  29751208 tactctccaatccactatcaaa-gagttcttacaaaagggatacaaaaggttacaagaaattagatttgacaagttcacaatgaacaaaccctaatttct 29751306  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaa 199  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29751307 acccttttcccaatctcaccaagacactcaatgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaa 29751406  T
Q  200 ccctagagttgc 211  Q
    ||||||||||||    
T  29751407 ccctagagttgc 29751418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 29720484 - 29720274
Alignment:
Q  1 tactcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||    
T  29720484 tactctccaatccactatcaaa-gagttcttacaaaagggatacaaaaggttacaagaaattagattagacaagttcacaatgaactaaccctaatttct 29720386  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaa 199  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29720385 acccttttcccaatctcaccaagacactcaatgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaa 29720286  T
Q  200 ccctagagttgc 211  Q
    ||||||||||||    
T  29720285 ccctagagttgc 29720274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 29722644 - 29722434
Alignment:
Q  1 tactcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||    
T  29722644 tactctccaatccactatcaaa-gagttcttacaaaagggatacaaaaggttacaagaaattagattagacaagttcacaatgaactaaccctaatttct 29722546  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaa 199  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29722545 acccttttcccaatctcaccaagacactcaatgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaa 29722446  T
Q  200 ccctagagttgc 211  Q
    ||||||||||||    
T  29722445 ccctagagttgc 29722434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 22536345 - 22536541
Alignment:
Q  8 caatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctaccctttt 107  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22536345 caatccactatcaaa-gagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctaccctttt 22536443  T
Q  108 cccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaaccctagag 207  Q
    |||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22536444 cccaatctcaccaagacactcaatgattctctc--tgcagggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagag 22536541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 2 - 218
Target Start/End: Complemental strand, 40380210 - 40379995
Alignment:
Q  2 actcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  40380210 actctccaatccactatcaaatgagttctttacaaaagggatacaagaggttacaagaaattagtttgacaagttcactatgaacaaaccctaatttcta 40380111  T
Q  101 cccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaac 200  Q
    ||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  40380110 cccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccgagagatactctaatcaaagaaccctaaac 40380013  T
Q  201 cctagagttgcccctttg 218  Q
    ||||||| | ||||||||    
T  40380012 cctagagcttcccctttg 40379995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 2 - 218
Target Start/End: Complemental strand, 40382421 - 40382206
Alignment:
Q  2 actcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  40382421 actctccaatccactatcaaatgagttctttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaacttcta 40382322  T
Q  101 cccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaac 200  Q
    ||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  40382321 cccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccgagagatactctaatcaaagaaccctaaac 40382224  T
Q  201 cctagagttgcccctttg 218  Q
    ||||||| | ||||||||    
T  40382223 cctagagcttcccctttg 40382206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 16546751 - 16546534
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttc 98  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  16546751 tactctccaatccactatcaaatgagttctttacaaaagggatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttc 16546652  T
Q  99 tacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaa 198  Q
    ||||| ||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16546651 tacccctttcctaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaa 16546554  T
Q  199 accctagagttgcccctttg 218  Q
    ||||||||| | ||||||||    
T  16546553 accctagagcttcccctttg 16546534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 16544529 - 16544312
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttc 98  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||  ||||||||||||||||| |||||| |||||||||||||||||||    
T  16544529 tactctccaatccactatcaaatgagttctttacaaaagggatacaagaggttatgagaaattagcttgacaatgttcactatgaacaaaccctaatttc 16544430  T
Q  99 tacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaa 198  Q
    ||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16544429 tacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaa 16544332  T
Q  199 accctagagttgcccctttg 218  Q
    ||||||||| | ||||||||    
T  16544331 accctagagcttcccctttg 16544312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 2 - 209
Target Start/End: Original strand, 18441697 - 18441904
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||||| |||||| |||||||||||    
T  18441697 actctccaatccactatcaa-tgagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttcacaaggaacaa-ccctaatttct 18441794  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaaccctaa 198  Q
    |||||||| ||||||||||||||||||||||||||| || ||   |||||||||||||||||||  | ||||||||||  |||||||||||| || ||||    
T  18441795 accctttttccaatctcaccaagacactcaatgattttcactcaccaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaag-actctaa 18441893  T
Q  199 accctagagtt 209  Q
    |||||||||||    
T  18441894 accctagagtt 18441904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 2 - 209
Target Start/End: Original strand, 9789273 - 9789480
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||||| |||||| || ||||||||    
T  9789273 actctccaatccactatcaa-tgagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttcacaaggaacaa-ccttaatttct 9789370  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaaccctaa 198  Q
    |||||||| ||||||||||||||||||||||||||| || ||   |||||||||||||||||||  | ||||||||||  |||||||||||| || ||||    
T  9789371 accctttttccaatctcaccaagacactcaatgattttcactcaccaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaag-actctaa 9789469  T
Q  199 accctagagtt 209  Q
    |||||||||||    
T  9789470 accctagagtt 9789480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 2 - 209
Target Start/End: Complemental strand, 16409594 - 16409387
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||||| |||||| |||||||||||    
T  16409594 actctccaatccactatcaa-tgagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttcacaaagaacaa-ccctaatttct 16409497  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaaccctaa 198  Q
    |||||||| ||||||||||||||||||||||||||| || ||   |||||||||| ||||||||  | ||||||||||  |||||||||||| || ||||    
T  16409496 accctttttccaatctcaccaagacactcaatgattttcactcaccaaggtgtttaccatgtttcccaacccaagagaagctctaatcaaag-actctaa 16409398  T
Q  199 accctagagtt 209  Q
    |||||||||||    
T  16409397 accctagagtt 16409387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 2 - 209
Target Start/End: Complemental strand, 26178001 - 26177795
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||||| |||||| |||||||||||    
T  26178001 actctccaatccactatcaa-tgagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttcacaaagaacaa-ccctaatttct 26177904  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaaccctaa 198  Q
    |||||||||| ||||||||||||||||||||||||| || ||   |||||||||| ||||||||  | ||||||||||  |||||||||||| || ||||    
T  26177903 acccttttcc-aatctcaccaagacactcaatgattttcactcaccaaggtgtttaccatgtttcccaacccaagagaagctctaatcaaag-actctaa 26177806  T
Q  199 accctagagtt 209  Q
    |||||||||||    
T  26177805 accctagagtt 26177795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 3 - 204
Target Start/End: Complemental strand, 25412878 - 25412672
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||| |||||| ||||||||||||    
T  25412878 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttcta 25412782  T
Q  101 cccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaa 192  Q
    ||||||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| ||||||||||||| |    
T  25412781 cccttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-a 25412684  T
Q  193 ccctaaacccta 204  Q
    ||||||||||||    
T  25412683 ccctaaacccta 25412672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 209
Target Start/End: Complemental strand, 26170853 - 26170686
Alignment:
Q  42 tacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaagacactcaatgattctct 139  Q
    |||||||| ||||||||||||||| || ||||||||||||| |||||| || |||||||||||||||||| ||||||||||||||||||||||||| ||     
T  26170853 tacaaaagagttacaagaaattagatttgacaagttcacaaagaacaatcc-taatttctacccttttcc-aatctcaccaagacactcaatgattttca 26170756  T
Q  140 ctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaaccctaaaccctagagtt 209  Q
    ||   |||||||||| ||||||||  | ||||||||||  || ||||||||| || |||||||||||||||    
T  26170755 ctcaccaaggtgtttaccatgtttcccaacccaagagaagctgtaatcaaag-actctaaaccctagagtt 26170686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 211
Target Start/End: Complemental strand, 13343179 - 13342964
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||||||||||||| |||||||||   |||| ||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||||    
T  13343179 actctccaatccactatcaa-tgagttcttc--aaagagatacaaaaggattacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttct 13343084  T
Q  100 accc--ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaa 189  Q
    ||||  |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| |||||||||| |    
T  13343083 acccttttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaga 13342985  T
Q  190 gaaccctaaaccctagagttgc 211  Q
    | ||||||||||||| ||||||    
T  13342984 g-accctaaaccctaaagttgc 13342964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 2 - 211
Target Start/End: Complemental strand, 30182707 - 30182492
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||||||||||||| ||||||||| |||| | |||| |||||| ||||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  30182707 actctccaatccactatcaa-tgagttcttccaaa-gagatagaaaagggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttct 30182611  T
Q  100 acc-cttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaag 190  Q
    |||  |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| |||||||||||||    
T  30182610 accatttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttgcaatgtttcccaacccaagaga-actctaatcaaag 30182512  T
Q  191 aaccctaaaccctagagttgc 211  Q
     ||||||| ||||| ||||||    
T  30182511 -accctaatccctaaagttgc 30182492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 32636942 - 32636824
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||||||||| ||||||||||||| | |||||||| || ||||||||||||||| ||||||||||||||| |||| |||| |||||||||    
T  32636942 ctctccaatccactatcaaa-gagttcttacaaa-gagatacaaatgggttacaagaaattagctttgacaagttcacaaagaac-aaccataatttcta 32636846  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  32636845 cccattttcccaatctcaccaa 32636824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 211
Target Start/End: Original strand, 36074092 - 36074309
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||||||||||||| |||||||||   |||| |||||||||| |||||||||||||||||| ||||||||| ||| |||||| |||||||||||    
T  36074092 actctccaatccactatcaa-tgagttcttc--aaagagatacaaaagagttacaagaaattagctttgacaagttcgcaaagaacaa-ccctaatttct 36074187  T
Q  100 accc----ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatca 187  Q
    ||||    |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| ||||||||||    
T  36074188 acccttttttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatca 36074286  T
Q  188 aagaaccctaaaccctagagttgc 211  Q
    ||| ||||||||||||| ||||||    
T  36074287 aag-accctaaaccctaaagttgc 36074309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 13695757 - 13695859
Alignment:
Q  21 aatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctcac 118  Q
    |||||||||||   |||| ||||||||||| ||||||||||||||||| | |||| |||||| |||||||||||||||| |||||||||||||||||| |    
T  13695757 aatgagttctttacaaagagatacaaaagggttacaagaaattagctttaacaagctcacaaagaacaaaccctaatttgtacccttttcccaatctctc 13695856  T
Q  119 caa 121  Q
    |||    
T  13695857 caa 13695859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 213583 - 213465
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || ||||||||||||||| || ||||| |||||| |||| ||||||||||||||    
T  213583 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagctttaacaagctcacaaagaac-aaccctaatttcta 213487  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  213486 cccattttcccaatctcaccaa 213465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 13239869 - 13239751
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||||| |||||||||||||||||| | ||||||||||| ||| |||||||||||||||    
T  13239869 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagagttacaagaaattagcttcaacaagttcacaaagaa-aaaccctaatttcta 13239773  T
Q  101 cc-cttttcccaatctcaccaa 121  Q
    ||  |||| |||||||||||||    
T  13239772 ccattttttccaatctcaccaa 13239751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 13488321 - 13488203
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||  |||||||||||| |||| ||||||||||||||    
T  13488321 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 13488225  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| |||||||||||| |||||    
T  13488224 cccattttcccaatcttaccaa 13488203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 42428480 - 42428598
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||  |||||||||||| ||| ||||| |||||||||    
T  42428480 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaa-aaaccataatttcta 42428576  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  42428577 cccattttcccaatctcaccaa 42428598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 39468605 - 39468714
Alignment:
Q  9 aatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-tt 105  Q
    ||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||  |||||||||||| |||| ||||||||||||||||| ||    
T  39468605 aatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttctacccatt 39468701  T
Q  106 ttcccaatctcac 118  Q
    |||||||||||||    
T  39468702 ttcccaatctcac 39468714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 33831798 - 33831683
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    ||||||||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| ||||||| |||||||||||    
T  33831798 ctcttcaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttcta 33831702  T
Q  101 ccc-ttttcccaatctcac 118  Q
    ||| |||| ||||||||||    
T  33831701 cccatttttccaatctcac 33831683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 37439259 - 37439161
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||||| |||||||||||||| ||| ||||||||||||| |||| ||||||||||||||    
T  37439259 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagagttacaagaaattaactttgacaagttcacaaagaac-aaccctaatttcta 37439163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 40147379 - 40147261
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| | |||||||||||||||||| | |||| |||| | |||||| ||||||||||||    
T  40147379 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacgaagaacaa-ccctaatttcta 40147283  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  40147282 cccattttcccaatctcaccaa 40147261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 28278434 - 28278316
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||| ||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| |||| |||||||||    
T  28278434 ctctccaatccactatcaa-tgagtttttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccataatttcta 28278338  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  28278337 cccattttcccaatctcaccaa 28278316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 42426285 - 42426403
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || || |||||||||||||| | ||| ||||||| |||||| ||||||||||||    
T  42426285 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttgcaagaaattagcttcaacaatttcacaaagaacaa-ccctaatttcta 42426381  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||| ||||||||||||    
T  42426382 cccattttctcaatctcaccaa 42426403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 533882 - 533769
Alignment:
Q  8 caatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-t 104  Q
    |||||||||||||| |||||||||||||| | |||||||| || |||||| |||||||||| | |||| |||||| || ||| ||||||||||||||| |    
T  533882 caatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaaaaaattagcttcaacaagctcacaaagaccaa-ccctaatttctacccat 533786  T
Q  105 tttcccaatctcaccaa 121  Q
    |||||||||||||||||    
T  533785 tttcccaatctcaccaa 533769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 31183089 - 31182976
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctac 101  Q
    |||| ||||||| |||||| |||||||||||||| |||||||||| ||||||||||||||| |||  ||||  |||||| |||| || ||||||||||||    
T  31183089 ctctccaatccagtatcaa-tgagttcttacaaa-gggatacaaatggttacaagaaattaacttaaacaaactcacaaagaac-aatcctaatttctac 31182993  T
Q  102 ccttttcccaatctcac 118  Q
    || ||| ||||||||||    
T  31182992 ccattttccaatctcac 31182976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 8565996 - 8566111
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||| | |||||||||| || |||||||||||||||||  ||||| |||||| ||||||| ||||| |||||    
T  8565996 ctctccaatccactatcaa-tgagttcttacaga-gggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaagttcta 8566092  T
Q  101 ccc-ttttcccaatctcac 118  Q
    ||| ||||| |||||||||    
T  8566093 cccattttctcaatctcac 8566111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 9049392 - 9049506
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaa-ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||| |||| |||||||||||||| | ||||||||| |||||||||||||||||||  ||||| ||||||  ||||||| ||||||||||    
T  9049392 ctctccaatccactgtcaa-tgagttcttacaaa-gagatacaaaatggttacaagaaattagcttcaacaagctcacaa-aaacaaacactaatttcta 9049488  T
Q  101 cccttttcccaatctcac 118  Q
     | ||||||||| |||||    
T  9049489 tcattttcccaaactcac 9049506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 28750705 - 28750823
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| ||||||||||||||| | ||||||| || ||||| ||||||| ||| | ||| |||| || |||||| ||||||||||||    
T  28750705 ctctccaatccactatcaa-tgagttcttacaaaaag-atacaaatgggttacaggaaattaacttcaacaatttcataaagaacaa-ccctaatttcta 28750801  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  28750802 cccattttcccaatctcaccaa 28750823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 27637663 - 27637781
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaa--ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttct 99  Q
    |||| |||||||||||  |||||||||||||||| | |||||||||  |||||||||||||||| || | |||| ||| || |||||| |||||||||||    
T  27637663 ctctccaatccactat--aatgagttcttacaaa-gagatacaaaatgggttacaagaaattagtttaaacaagctcataaagaacaa-ccctaatttct 27637758  T
Q  100 accc-ttttcccaatctcaccaa 121  Q
    |||| ||||| ||||||||||||    
T  27637759 acccattttctcaatctcaccaa 27637781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 204
Target Start/End: Original strand, 30682972 - 30683178
Alignment:
Q  3 ctcttcaatccactatcaaatgagt--tcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttc 98  Q
    |||| |||||||||||||| |||||  ||||||||| |  |||||||||| ||||||||||||||||| | ||||||||||| ||||    |||||||||    
T  30682972 ctctccaatccactatcaa-tgagtattcttacaaa-gaaatacaaaagggttacaagaaattagcttcaacaagttcacaaagaac----cctaatttc 30683065  T
Q  99 taccc-ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaa 189  Q
    ||||| |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| ||||||||||||    
T  30683066 taccctttttcccaatctcacaaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcgcaacccaagaga-actctaatcaaa 30683164  T
Q  190 gaaccctaaacccta 204  Q
    | ||||| |||||||    
T  30683165 g-accctcaacccta 30683178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 538143 - 538028
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||| |||||||| |||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| || | |||| |||||||||    
T  538143 ctctccaatctactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagagc-aaccttaatttcta 538047  T
Q  101 ccc-ttttcccaatctcac 118  Q
    ||| |||||||||||||||    
T  538046 cccattttcccaatctcac 538028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 5058163 - 5058047
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggt-tacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| ||  ||||||||| |||||| | |||| |||||  |||||| ||||||||||||    
T  5058163 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggatacaagaaaatagcttcaacaagctcaca--gaacaa-ccctaatttcta 5058069  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  5058068 cccattttcccaatctcaccaa 5058047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 38747078 - 38747009
Alignment:
Q  49 ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctca 117  Q
    |||||||||||||||||||  ||||| |||||| |||| ||||||||||||||||| ||||||||||||||    
T  38747078 ggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccattttcccaatctca 38747009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 16452198 - 16452003
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||||| || |||||||||||||| | |||||||| || |||||||||||||||||  ||||| ||| || ||||||| | |||||||||    
T  16452198 ctctccaatccactatgaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcagaaagaacaaa-cttaatttcta 16452102  T
Q  101 ccc-ttttcccaatctc-------accaagacactcaatgattctctctttacaaggtgtttcccatgttttc-tacccaagagatactctaatcaaaga 191  Q
    ||| |||| ||||||||       | ||||||||||||||||| || |||  |||||||||| | |||||| |  |||||||||| ||||||||||||||    
T  16452101 cccatttttccaatctcatcaatgaacaagacactcaatgattgtcacttaccaaggtgtttacaatgtttccgaacccaagaga-actctaatcaaaga 16452003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 27015583 - 27015531
Alignment:
Q  69 acaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 121  Q
    |||||||||||| |||||| ||||||||||||||  ||||||||||||||||||    
T  27015583 acaagttcacaaagaacaa-ccctaatttctacctattttcccaatctcaccaa 27015531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 316864 - 316769
Alignment:
Q  21 aatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatct 115  Q
    |||||||||||   |||| ||||||||||| ||||||||||||||||| | |||| || | | ||||||||| ||||||||||| ||||| ||||||    
T  316864 aatgagttctttacaaagagatacaaaaggattacaagaaattagcttcaacaagctctccaagaacaaacc-taatttctacctttttctcaatct 316769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 195; Significance: 1e-106; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 54635244 - 54635035
Alignment:
Q  1 tactcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54635244 tactctccaatccactatcaaa-gagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttcta 54635146  T
Q  101 cccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  54635145 cccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaac 54635046  T
Q  201 cctagagttgc 211  Q
    |||||||||||    
T  54635045 cctagagttgc 54635035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 6716619 - 6716412
Alignment:
Q  1 tactcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6716619 tactctccaatccactatcaaa-gagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttcta 6716521  T
Q  101 cccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6716520 cccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaac 6716421  T
Q  201 cctagagtt 209  Q
    |||||||||    
T  6716420 cctagagtt 6716412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 45283106 - 45282893
Alignment:
Q  1 tactcttcaatccactatcaaatgagttcttacaaaa---gggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaattt 97  Q
    |||||| ||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  45283106 tactctccaatccactatcaaatgagttcttacaaaaaaagggatacaaaaggttacaagaaattagcttgacaagttcactatgaacaaaccctaattt 45283007  T
Q  98 ctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaacccta 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  45283006 ctacccttttcccaatctcaccaagacactcaatgattctctctttgcaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaacccta 45282907  T
Q  198 aaccctagagttgc 211  Q
    ||||||||||||||    
T  45282906 aaccctagagttgc 45282893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 3617570 - 3617352
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttct 99  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3617570 tactctccaatccactatcaaatgagttctttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttct 3617471  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaa 199  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3617470 acccctttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaa 3617371  T
Q  200 ccctagagttgcccctttg 218  Q
    |||||||| | ||||||||    
T  3617370 ccctagagcttcccctttg 3617352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 25637547 - 25637331
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttct 99  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25637547 tactctccaatccactatcaaatgagttctttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttct 25637448  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaa 199  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25637447 acccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaa 25637350  T
Q  200 ccctagagttgcccctttg 218  Q
    |||||||| | ||||||||    
T  25637349 ccctagagatacccctttg 25637331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 4600792 - 4600998
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttc 98  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  4600792 tactctccaatccactatcaaatgagttctttacaaaaggaatacaaaaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttc 4600891  T
Q  99 tacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaa 198  Q
    ||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4600892 tacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaa 4600989  T
Q  199 accctagag 207  Q
    |||||||||    
T  4600990 accctagag 4600998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 4598571 - 4598777
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttc 98  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  4598571 tactctccaatccactatcaaatgagttctttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttc 4598670  T
Q  99 tacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaa 198  Q
    ||||| ||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4598671 tacccctttcccaatctcaccaagacactcaatgattctctc--tacagggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaa 4598768  T
Q  199 accctagag 207  Q
    |||||||||    
T  4598769 accctagag 4598777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 10211515 - 10211309
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttc 98  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  10211515 tactctccaatccactatcaaatgagttctttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttc 10211416  T
Q  99 tacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaa 198  Q
    ||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  10211415 tacccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaa 10211318  T
Q  199 accctagag 207  Q
    |||||||||    
T  10211317 accctagag 10211309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 10056339 - 10056122
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttc 98  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  10056339 tactctccaatccactatcaaatgagttctttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttc 10056240  T
Q  99 tacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaa 198  Q
    ||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  10056239 tacccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaa 10056142  T
Q  199 accctagagttgcccctttg 218  Q
    || |||||| | ||||||||    
T  10056141 actctagagcttcccctttg 10056122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 10058561 - 10058344
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttc 98  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  10058561 tactctccaatccactatcaaatgagttctttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttc 10058462  T
Q  99 tacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaa 198  Q
    ||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  10058461 tacccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaa 10058364  T
Q  199 accctagagttgcccctttg 218  Q
    || |||||| | ||||||||    
T  10058363 actctagagcttcccctttg 10058344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 10060783 - 10060566
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttc 98  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  10060783 tactctccaatccactatcaaatgagttctttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttc 10060684  T
Q  99 tacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaa 198  Q
    ||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  10060683 tacccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaa 10060586  T
Q  199 accctagagttgcccctttg 218  Q
    || |||||| | ||||||||    
T  10060585 actctagagcttcccctttg 10060566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 10063005 - 10062788
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttc 98  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  10063005 tactctccaatccactatcaaatgagttctttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttc 10062906  T
Q  99 tacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaa 198  Q
    ||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  10062905 tacccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaa 10062808  T
Q  199 accctagagttgcccctttg 218  Q
    || |||||| | ||||||||    
T  10062807 actctagagcttcccctttg 10062788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 10065227 - 10065010
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttc 98  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  10065227 tactctccaatccactatcaaatgagttctttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttc 10065128  T
Q  99 tacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaa 198  Q
    ||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  10065127 tacccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaa 10065030  T
Q  199 accctagagttgcccctttg 218  Q
    || |||||| | ||||||||    
T  10065029 actctagagcttcccctttg 10065010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 10209295 - 10209089
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttc 98  Q
    |||||| |||||||||||||||||||||||| ||||||||  ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  10209295 tactctccaatccactatcaaatgagttctttacaaaaggactacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttc 10209196  T
Q  99 tacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaa 198  Q
    ||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  10209195 tacccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaa 10209098  T
Q  199 accctagag 207  Q
    |||||||||    
T  10209097 accctagag 10209089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 19 - 218
Target Start/End: Complemental strand, 10067431 - 10067232
Alignment:
Q  19 caaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttctacccttttcccaatctc 116  Q
    ||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||    
T  10067431 caaatgagttctttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttctacccctttcccaatctc 10067332  T
Q  117 accaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctt 216  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||| | ||||||    
T  10067331 accaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaactctagagcttcccctt 10067234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 87 - 209
Target Start/End: Complemental strand, 6718718 - 6718596
Alignment:
Q  87 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6718718 aaccctaatttctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatc 6718619  T
Q  187 aaagaaccctaaaccctagagtt 209  Q
    |||||||||||||||||||||||    
T  6718618 aaagaaccctaaaccctagagtt 6718596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 801212 - 801003
Alignment:
Q  1 tactcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg--ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaattt 97  Q
    |||||| |||||||||||||| |||||||||||||||| ||||||||| |  |||||||||||||| || |||||||||||||||||||| |||||||||    
T  801212 tactctccaatccactatcaa-tgagttcttacaaaagagatacaaaaagagttacaagaaattagatttgacaagttcacaatgaacaa-ccctaattt 801115  T
Q  98 ctacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaaccct 196  Q
    |||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||  | ||||||||||  |||||||||||| || ||    
T  801114 ctacccttttcccaatctcaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaag-actct 801016  T
Q  197 aaaccctagagtt 209  Q
    |||||||||||||    
T  801015 aaaccctagagtt 801003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 2 - 158
Target Start/End: Original strand, 7780053 - 7780208
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    ||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||    
T  7780053 actctccaatccactatcaa-tgagttcttacaaaagagatacaaaaggttacaagaaattagatttgacaagttcacaatgaacaa-ccctaatttcta 7780150  T
Q  101 cccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttccca 158  Q
    |||||||||||||||||| |||||||||||||||| ||||| | ||||||||||||||    
T  7780151 cccttttcccaatctcacgaagacactcaatgattttctctcttcaaggtgtttccca 7780208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 217
Target Start/End: Complemental strand, 45095281 - 45095062
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||| |||||| ||||||||||||    
T  45095281 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttcta 45095185  T
Q  101 cccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaa 192  Q
    || |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| ||||||||||||| |    
T  45095184 ccattttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-a 45095087  T
Q  193 ccctaaaccctagagttgccccttt 217  Q
    |||||||||||| ||||||| ||||    
T  45095086 ccctaaaccctaaagttgcctcttt 45095062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 211
Target Start/End: Original strand, 23200187 - 23200402
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||| ||||||||| ||||||||||||||| | |||||||||| ||||||||||||||||| ||||||||||||| |||||| | |||||||||    
T  23200187 actctccaattcactatcaa-tgagttcttacaaaaag-atacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ctctaatttct 23200283  T
Q  100 accctttt-cccaatctcac------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaaga 191  Q
    ||| |||| |||||||||||      ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| |||||||||||||     
T  23200284 accatttttcccaatctcaccaagaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaaactctaatcaaag- 23200382  T
Q  192 accctaaaccctagagttgc 211  Q
    ||||||||||||||||||||    
T  23200383 accctaaaccctagagttgc 23200402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 212
Target Start/End: Original strand, 5260372 - 5260589
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||||||||||||| ||||||||| |||| | ||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||||    
T  5260372 actctccaatccactatcaa-tgagttcttccaaa-gagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttct 5260468  T
Q  100 accc--ttttcccaatctc-------accaagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaa 189  Q
    ||||  |||||||||||||       ||||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| ||||||||||||    
T  5260469 acccttttttcccaatctcaccaatgaccaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaa 5260567  T
Q  190 gaaccctaaaccctagagttgcc 212  Q
    | ||||||||||||| |||||||    
T  5260568 g-accctaaaccctaaagttgcc 5260589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 37408576 - 37408458
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    ||||||||||||||||||| |||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||| |||||| ||||||||||||    
T  37408576 ctcttcaatccactatcaa-tgagttcttacaaa-gagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttcta 37408480  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  37408479 ccctttttcccaatctcaccaa 37408458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 211
Target Start/End: Original strand, 23197988 - 23198203
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||| ||||||||| ||||||||||||||| | |||||||||| ||||||||||||||||| |||||||||||||  ||||| | |||||||||    
T  23197988 actctccaattcactatcaa-tgagttcttacaaaaag-atacaaaagggttacaagaaattagctttgacaagttcacaaaaaacaa-ctctaatttct 23198084  T
Q  100 accctttt-cccaatctcac------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaaga 191  Q
    ||| |||| |||||||||||      ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| |||||||||||||     
T  23198085 accatttttcccaatctcaccaagaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaaactctaatcaaag- 23198183  T
Q  192 accctaaaccctagagttgc 211  Q
    ||||||||||||||||||||    
T  23198184 accctaaaccctagagttgc 23198203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 209
Target Start/End: Original strand, 5258193 - 5258407
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||||||||||||| ||||||||| |||| | ||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||||    
T  5258193 actctccaatccactatcaa-tgagttcttccaaa-gagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttct 5258289  T
Q  100 accc--ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaa 189  Q
    ||||  |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| ||||||||||||    
T  5258290 acccttttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaa 5258388  T
Q  190 gaaccctaaaccctagagtt 209  Q
    | ||||||||||||| ||||    
T  5258389 g-accctaaaccctaaagtt 5258407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 209
Target Start/End: Original strand, 9636175 - 9636390
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||||||||||||| ||||||||||||||| | |||||||||| |||||||||||||| || ||||||||||||| |||||| |||||||||||    
T  9636175 actctccaatccactatcaa-tgagttcttacaaaaag-atacaaaagggttacaagaaattagttttgacaagttcacaaagaacaa-ccctaatttct 9636271  T
Q  100 acccttt--tcccaatctc-------accaagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaa 189  Q
    |||||||  ||||||||||       ||||||||||||||||||| || ||   |||||||||| | || |||  | |||||||||| ||||||||||||    
T  9636272 acccttttctcccaatctcaccaatgaccaagacactcaatgattttcactcaccaaggtgtttacaatatttcccaacccaagagagactctaatcaaa 9636371  T
Q  190 gaaccctaaaccctagagtt 209  Q
    | ||||||||||||| ||||    
T  9636372 g-accctaaaccctaaagtt 9636390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 19683939 - 19684054
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | ||||||||||| ||||||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  19683939 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttcta 19684035  T
Q  101 ccc-ttttcccaatctcac 118  Q
    ||| |||||||||||||||    
T  19684036 cccattttcccaatctcac 19684054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 29196436 - 29196555
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || || |||||||||||||| |||||| |||||| |||||||||||||||||||    
T  29196436 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttccaagaaattagctttgacaagctcacaaagaacaaaccctaatttcta 29196533  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  29196534 cccattttcccaatctcaccaa 29196555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 7762383 - 7762265
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||||| |||||||||||||||||| | ||||||||||| |||||| ||||||||||||    
T  7762383 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagagttacaagaaattagcttcaacaagttcacaaagaacaa-ccctaatttcta 7762287  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||| ||||||||||||    
T  7762286 ccctttttctcaatctcaccaa 7762265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 7764582 - 7764476
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||||| |||||||||||||||||| | ||||||||||| |||||| ||||||||||||    
T  7764582 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagagttacaagaaattagctttaacaagttcacaaagaacaa-ccctaatttcta 7764486  T
Q  101 cccttttccc 110  Q
    ||||||||||    
T  7764485 cccttttccc 7764476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 22835052 - 22835167
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| |||||||||| || |||||||||||||||||  ||||| |||||| ||||||| |||||||||||    
T  22835052 ctctccaatccactatcaa-tgagttcttacaaa-gggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttcta 22835148  T
Q  101 ccc-ttttcccaatctcac 118  Q
    ||| |||||||||||||||    
T  22835149 cccattttcccaatctcac 22835167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 39153411 - 39153526
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||| ||| |||||||||| | ||||||||||||||||||  ||||| |||||||||||||| |||||||||||    
T  39153411 ctctccaatccactatcaa-tgagttcttataaa-gggatacaaatgagttacaagaaattagcttaaacaagctcacaatgaacaaa-cctaatttcta 39153507  T
Q  101 ccc-ttttcccaatctcac 118  Q
    ||| |||||||||||||||    
T  39153508 cccattttcccaatctcac 39153526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 4570070 - 4569952
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagcttgac-aagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| | |||||||||||||||||| |  ||| ||||||||||||| ||||||||||||    
T  4570070 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaataagctcacaatgaacaa-ccctaatttcta 4569974  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  4569973 cccattttcccaatctcaccaa 4569952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 30236243 - 30236129
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaa-aggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||  ||||| |||||| |||| ||||||||||||||    
T  30236243 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaataggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 30236147  T
Q  101 ccc-ttttcccaatctca 117  Q
    ||| ||||||||||||||    
T  30236146 cccattttcccaatctca 30236129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 34491330 - 34491212
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| | |||||||||||||||||| | |||| |||||| |||||| ||||||||||||    
T  34491330 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaa-ccctaatttcta 34491234  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  34491233 cccattttcccaatctcaccaa 34491212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 40734616 - 40734498
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| |||||||||| | ||||||||||||||| || | |||| |||||| |||||| ||||||||||||    
T  40734616 ctctccaatccactatcaa-tgagttcttacaaa-gggatacaaatgtgttacaagaaattaggttcaacaagctcacaaagaacaa-ccctaatttcta 40734520  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  40734519 cccattttcccaatctcaccaa 40734498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 44700528 - 44700646
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaa-aggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||||||||| ||||||||||||| | |||||||| ||||||||||||||||||||  ||||  |||||| |||| ||||||||||||||    
T  44700528 ctctccaatccactatcaaa-gagttcttacaaa-gagatacaaataggttacaagaaattagcttcaacaaactcacaaagaac-aaccctaatttcta 44700624  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  44700625 cccattttcccaatctcaccaa 44700646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 5236523 - 5236624
Alignment:
Q  21 aatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctca 117  Q
    |||||||||||||||| | |||||||| || |||||||||||||||||  |||||||||||| |||| ||||||||||||||||| ||||||||||||||    
T  5236523 aatgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttctacccattttcccaatctca 5236620  T
Q  118 ccaa 121  Q
    ||||    
T  5236621 ccaa 5236624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 31314563 - 31314447
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||||||||| |||||||||||||| | ||||||| || |||||||||||||||||  ||||| ||||||||||| ||||||||||||||    
T  31314563 ctctccaatccactatcaaa-gagttcttacaaaaag-atacaaatgggttacaagaaattagcttcaacaagatcacaatgaac-aaccctaatttcta 31314467  T
Q  101 ccc-ttttcccaatctcacc 119  Q
    ||| ||||| ||||||||||    
T  31314466 cccattttctcaatctcacc 31314447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 41819578 - 41819691
Alignment:
Q  8 caatccactatcaaatgagttcttacaaaagggatacaaaa--ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc- 103  Q
    |||||||||||  |||||||||||||||| | |||||||||  ||||||||||||||||||| |||||| ||||||  ||| |||||||||||||||||     
T  41819578 caatccactat--aatgagttcttacaaa-gagatacaaaatgggttacaagaaattagcttagacaagctcacaaaaaac-aaccctaatttctaccca 41819673  T
Q  104 ttttcccaatctcaccaa 121  Q
    ||||||||||||||||||    
T  41819674 ttttcccaatctcaccaa 41819691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 49199519 - 49199638
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaa--ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    |||| |||||||||||||| |||||||||||||| | |||||||||  |||||||||||||||||||  ||||| |||||| |||| |||| ||||||||    
T  49199519 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccttaatttct 49199615  T
Q  100 accc-ttttcccaatctcaccaa 121  Q
    |||| ||||||||||||||||||    
T  49199616 acccattttcccaatctcaccaa 49199638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 760965 - 760850
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| |||||||||| || |||||||||||||||||  ||||| |||||| ||||| | |||||||||||    
T  760965 ctctccaatccactatcaa-tgagttcttacaaa-gggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaga-cctaatttcta 760869  T
Q  101 ccc-ttttcccaatctcac 118  Q
    ||| |||||||||||||||    
T  760868 cccattttcccaatctcac 760850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 44331663 - 44331545
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| | |||||||||||| | |||||||| || ||||||||||||||||| | |||| ||||||||||||| ||||||||||||    
T  44331663 ctctccaatccactatcaa-taagttcttacaaa-gagatacaaatggcttacaagaaattagcttcaacaagctcacaatgaacaa-ccctaatttcta 44331567  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| |||||| |||||||||||    
T  44331566 cccattttcctaatctcaccaa 44331545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 209
Target Start/End: Complemental strand, 40735501 - 40735288
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaa-ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | ||||||||  |||||||| |||||||||| | |||| |||||| |||||| ||||||||||||    
T  40735501 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaactggttacaataaattagcttcaacaagctcacaaagaacaa-ccctaatttcta 40735405  T
Q  101 ccc-ttttcccaatctcac-------caagacactcaatgattctctc-tttacaaggtgtttcccatgttttct-acccaagagatactctaatcaaag 190  Q
    ||| ||||| |||||||||       ||||||||||||||||| || | ||| |||||||||| | |||||| || |||||||||| ||| |||||||||    
T  40735404 cccattttctcaatctcaccaatgaacaagacactcaatgattttcacttttccaaggtgtttacaatgtttcctaacccaagaga-actttaatcaaag 40735306  T
Q  191 aaccctaaaccctagagtt 209  Q
     ||||| ||||||| ||||    
T  40735305 -accctcaaccctaaagtt 40735288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 209
Target Start/End: Original strand, 32744486 - 32744689
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||||||||||||||||||| |||||||||| |||| |||||||| | ||||||||||||||||||  ||||| |||||| |||||||  ||||||||||    
T  32744486 ctcttcaatccactatcaaa-gagttcttac-aaagtgatacaaatgagttacaagaaattagcttaaacaagctcacaaagaacaaa--ctaatttcta 32744581  T
Q  101 ccc-ttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaaccctaa 198  Q
    ||| ||||  |||||||| ||| | ||||||||||| || ||   ||| |||||| | ||||||  | |||||||||| ||||||||||||| ||||| |    
T  32744582 cccattttttcaatctca-caaaatactcaatgattttcactcaccaatgtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctca 32744678  T
Q  199 accctagagtt 209  Q
    |||||| ||||    
T  32744679 accctaaagtt 32744689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 29682477 - 29682362
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaa-aggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| ||||||||||| |||||||||||||  ||| |||||||||||||||  ||||| |||||| ||||||| | |||||||||    
T  29682477 ctctccaatccactatcaa-tgagttcttac-aaagggatacaaatgggtgacaagaaattagcttaaacaagctcacaaagaacaaa-cataatttcta 29682381  T
Q  101 ccc-ttttcccaatctcac 118  Q
    ||| |||||||||||||||    
T  29682380 cccattttcccaatctcac 29682362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 43401856 - 43401970
Alignment:
Q  8 caatccactatcaaatgagttcttacaaaagggatacaaaagg--ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc- 103  Q
    |||||||||||||| |||||||||||||| | |||| |||| |  |||||||||||||||||  ||||| |||||| |||| |||||||||||||||||     
T  43401856 caatccactatcaa-tgagttcttacaaa-gagataaaaaatgcgttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctaccca 43401952  T
Q  104 ttttcccaatctcaccaa 121  Q
    ||||||||||||||||||    
T  43401953 ttttcccaatctcaccaa 43401970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 9581400 - 9581290
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| |||||||||| || ||| ||||||||||||| | |||| |||||| ||||||||| |||||||||    
T  9581400 ctctccaatccactatcaa-tgagttcttacaaa-gggatacaaatgggttaaaagaaattagcttaaacaagctcacaaagaacaaacc-taatttcta 9581304  T
Q  101 cccttttcccaatc 114  Q
    ||| ||||| ||||    
T  9581303 cccatttccgaatc 9581290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 29813181 - 29813063
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||||| ||||||||||||||||| | ||| |||| || |||||||||||||||||  |||||||||||| |||| ||||||||||||||    
T  29813181 ctctccaatccactat-aaatgagttcttacaaa-gagatgcaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 29813085  T
Q  101 cc-cttttcccaatctcaccaa 121  Q
    ||  |||| |||||||||||||    
T  29813084 cctatttttccaatctcaccaa 29813063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 46860592 - 46860474
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||| ||||||| | |||||||| || |||||||||||||||||  ||||| |||||| ||||||| |||||||||||    
T  46860592 ctctccaatccactatcaa-tgagttattacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaa-cctaatttcta 46860496  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||| ||||||||||||    
T  46860495 cccattttctcaatctcaccaa 46860474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 51398932 - 51398818
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| | ||||||||||||||||||  |||||||||| | |||| ||||||||||||||    
T  51398932 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagttcactaagaac-aaccctaatttcta 51398836  T
Q  101 ccc-ttttcccaatctca 117  Q
    ||| |||| |||||||||    
T  51398835 cccatttttccaatctca 51398818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 53921553 - 53921671
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| ||||||||||||||| | ||||||| | |||||||||||||||| || ||||| ||||||  |||||| |||||||||||    
T  53921553 ctctccaatccactatcaa-tgagttcttacaaaatg-atacaaatgagttacaagaaattagctttaacaagctcacaaacaacaaa-cctaatttcta 53921649  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| |||| |||||||||||||    
T  53921650 cccatttttccaatctcaccaa 53921671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 121
Target Start/End: Original strand, 5433971 - 5434046
Alignment:
Q  49 ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttt--tcccaatctcaccaa 121  Q
    ||||||||||||||||||| | |||| |||||| ||||||||||||||||||||| |||  |||||||||||||||    
T  5433971 ggttacaagaaattagctttaacaagctcacaaagaacaaaccctaatttctaccattttctcccaatctcaccaa 5434046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 32891222 - 32891105
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||||||||  ||||||||||||| | |||||||| | |||||||||||||||||| | |||| |||||| ||||||| | |||||||||    
T  32891222 ctctccaatccactatcaac-gagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaacttaatttcta 32891125  T
Q  101 ccc-ttttcccaatctcacc 119  Q
    ||| ||||| ||||||||||    
T  32891124 cccattttctcaatctcacc 32891105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 6095649 - 6095767
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttgac-aagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || ||||||||||||| ||| |  ||||| |||| |||||| ||||||||||||    
T  6095649 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattaacttcaagaagtttacaaagaacaa-ccctaatttcta 6095745  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    | | ||||||||||||||||||    
T  6095746 ctcattttcccaatctcaccaa 6095767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 29810986 - 29810868
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||  |||||||||||| |||| ||| ||||||||||    
T  29810986 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aactctaatttcta 29810890  T
Q  101 c-ccttttcccaatctcaccaa 121  Q
    |   |||||| |||||||||||    
T  29810889 catattttcctaatctcaccaa 29810868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 121
Target Start/End: Original strand, 51352197 - 51352278
Alignment:
Q  41 atacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 121  Q
    ||||||| ||||||||||||||| ||| | || | |||||||||||||||||||| ||||| | |||||| |||||||||||    
T  51352197 atacaaatggttacaagaaattaactttaaaaagctcacaatgaacaaaccctaacttctatcattttcctaatctcaccaa 51352278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 54593822 - 54593704
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||| |||||||||| | |||| |||||| |||||| |||||||||||     
T  54593822 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaataaattagcttcaacaagctcacaaagaacaa-ccctaatttctg 54593726  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    | | ||||||||||||||||||    
T  54593725 cacattttcccaatctcaccaa 54593704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 4055813 - 4055926
Alignment:
Q  3 ctcttcaatccactatcaaatgagtt-cttacaaaagggatacaaaag--gttacaagaaattagcttg-acaagttcacaatgaacaaaccctaatttc 98  Q
    ||||||||||||||||||| |||||| |||||||| | ||||||||||  |||||||||||||| |||  |||||||| | | ||||||  |||||||||    
T  4055813 ctcttcaatccactatcaa-tgagtttcttacaaa-gagatacaaaagaggttacaagaaattaacttttacaagttctccaagaacaa--cctaatttc 4055908  T
Q  99 tacccttttcccaatctc 116  Q
    ||||| ||||||||||||    
T  4055909 tacccatttcccaatctc 4055926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 46173475 - 46173377
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| ||| |||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| ||||||||||||||    
T  46173475 ctctccaatccactatcaa-tgaattcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 46173379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 109
Target Start/End: Original strand, 28253363 - 28253423
Alignment:
Q  50 gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcc 109  Q
    |||||||||||||| ||| | |||| ||||||||||| |||||||||||||||| ||||||    
T  28253363 gttacaagaaattaacttcaacaagctcacaatgaacgaaccctaatttctaccattttcc 28253423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 36018970 - 36018852
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaa--ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    |||| |||||||||||  ||||||||||||| |||| |||||||||   |||||||||||||| |||  ||||| |||||| |||| ||||||||||||     
T  36018970 ctctccaatccactat--aatgagttcttac-aaagagatacaaaatgagttacaagaaattaacttcaacaagctcacaaagaac-aaccctaatttca 36018875  T
Q  100 accc-ttttcccaatctcaccaa 121  Q
    |||| |||||||||| |||||||    
T  36018874 acccattttcccaatttcaccaa 36018852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 43403794 - 43403913
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg--ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttct 99  Q
    |||| |||||||||||||| |||||||||||||| | |||| || | |  ||||||||||| ||||| | |||| |||||| |||||| || ||||||||    
T  43403794 ctctccaatccactatcaa-tgagttcttacaaa-gagataaaacatgagttacaagaaatgagcttcaacaagctcacaaagaacaagcc-taatttct 43403890  T
Q  100 accc-ttttcccaatctcaccaa 121  Q
    |||| ||||||||||||||||||    
T  43403891 acccattttcccaatctcaccaa 43403913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 9666562 - 9666632
Alignment:
Q  50 gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcac 118  Q
    |||||||||||||||||| | |||| |||||| |||||||  ||||||||||||| |||| ||||||||||    
T  9666562 gttacaagaaattagcttcaacaagctcacaaagaacaaaatctaatttctacccatttttccaatctcac 9666632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 23391959 - 23392077
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaa-aggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||||||||| |||||||| | |||| ||||||||  ||||||||||||||| |||  ||||| |||||| ||||||| | |||||||||    
T  23391959 ctctacaatccactatcaaa-gagttcttgc-aaagtgatacaaatgggttacaagaaattatcttaaacaagctcacaaagaacaaa-cttaatttcta 23392055  T
Q  101 c-ccttttcccaatctcaccaa 121  Q
    | | ||||||||| ||||||||    
T  23392056 ctcattttcccaaactcaccaa 23392077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 25517069 - 25517121
Alignment:
Q  48 aggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctac 101  Q
    |||||| ||||||||||||| | ||| |||||| ||||||||||||||||||||    
T  25517069 aggttataagaaattagcttaa-aagctcacaaagaacaaaccctaatttctac 25517121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 31340266 - 31340369
Alignment:
Q  19 caaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacc-cttttcccaatct 115  Q
    ||||||||||||||| |||| |||||||| | |||||| |||||||||||  ||||| |||||| |||| ||||  ||||||||||  ||||||||||||    
T  31340266 caaatgagttcttac-aaagagatacaaatgagttacatgaaattagcttcaacaagctcacaaagaac-aacctcaatttctaccaattttcccaatct 31340363  T
Q  116 caccaa 121  Q
    ||||||    
T  31340364 caccaa 31340369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 4386926 - 4386875
Alignment:
Q  49 ggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctac 101  Q
    ||||||||||||||||||| | ||| |||||| ||||||| ||||||||||||    
T  4386926 ggttacaagaaattagcttaa-aagctcacaaagaacaaaacctaatttctac 4386875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 25690074 - 25689869
Alignment:
Q  1 tactcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25690074 tactctccaatccactatcaaa-gagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttcta 25689976  T
Q  101 cccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaac 200  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25689975 cctttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaac 25689876  T
Q  201 cctagag 207  Q
    |||||||    
T  25689875 cctagag 25689869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 3439623 - 3439416
Alignment:
Q  1 tactcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  3439623 tactctccaatccactatcaaa-gagttcttacaaaagggatacaaaaggttacaagaaattagcttgccaagttcataatgaacaaaccctaatttcta 3439525  T
Q  101 cccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaac 200  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3439524 cccttttcccaatctcaccaagacactcaatgattttctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaac 3439425  T
Q  201 cctagagtt 209  Q
    |||||||||    
T  3439424 cctagagtt 3439416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 15290644 - 15290438
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttc 98  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  15290644 tactctccaatccactatcaaatgagttctttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttc 15290545  T
Q  99 tacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaa 198  Q
    ||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  15290544 tacccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaa 15290447  T
Q  199 accctagag 207  Q
    |||||||||    
T  15290446 accctagag 15290438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 15471013 - 15470807
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttc 98  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  15471013 tactctccaatccactatcaaatgagttctttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttc 15470914  T
Q  99 tacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaa 198  Q
    ||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  15470913 tacccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaa 15470816  T
Q  199 accctagag 207  Q
    |||||||||    
T  15470815 accctagag 15470807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 42575372 - 42575578
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttc 98  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  42575372 tactctccaatccactatcaaatgagttctttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaatccctaatttc 42575471  T
Q  99 tacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaa 198  Q
    ||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  42575472 tacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaa 42575569  T
Q  199 accctagag 207  Q
    |||||||||    
T  42575570 accctagag 42575578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 2 - 209
Target Start/End: Complemental strand, 2627855 - 2627647
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg--ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttc 98  Q
    ||||| |||||||||||||| |||||||||||| ||| ||||||||| |  || ||||||||||| || |||||||||||||||||||| ||||||||||    
T  2627855 actctccaatccactatcaa-tgagttcttacacaagagatacaaaaagagttgcaagaaattagatttgacaagttcacaatgaacaa-ccctaatttc 2627758  T
Q  99 tacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaacccta 197  Q
    ||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||  | ||||||||||  |||||||||||| || |||    
T  2627757 tacccttttcccaatctcaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaag-actcta 2627659  T
Q  198 aaccctagagtt 209  Q
    ||||||||||||    
T  2627658 aaccctagagtt 2627647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 212
Target Start/End: Original strand, 34254381 - 34254594
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| | |||||||||||| | ||||||||||| ||||||||||||| ||| ||||||||||||| |||||| ||||||||||||    
T  34254381 ctctccaatccactatcaa-taagttcttacaaa-gagatacaaaagggttacaagaaattaactttgacaagttcacaaagaacaa-ccctaatttcta 34254477  T
Q  101 cccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaac 193  Q
    ||||||||||||||||||       ||||||||||||||||| || ||   |||||||||| | |||| | | |||||||||| ||||||||||||| ||    
T  34254478 cccttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtctccaacccaagaga-actctaatcaaag-ac 34254575  T
Q  194 cctaaaccctagagttgcc 212  Q
    ||||||||||| |||||||    
T  34254576 cctaaaccctaaagttgcc 34254594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 212
Target Start/End: Original strand, 34256557 - 34256770
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | ||||||||||| ||||||||||||| ||| ||||||||||||| |||||| ||||||||||||    
T  34256557 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagggttacaagaaattaactttgacaagttcacaaagaacaa-ccctaatttcta 34256653  T
Q  101 cccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaac 193  Q
    || |||| ||||||||||       ||||||||||||||||| || |    |||||||||| | |||||| | |||||||| | ||||||||||||| ||    
T  34256654 ccatttttccaatctcaccaatgaacaagacactcaatgattttcacacaccaaggtgtttacaatgtttccaacccaagata-actctaatcaaag-ac 34256751  T
Q  194 cctaaaccctagagttgcc 212  Q
    ||||||||||| |||||||    
T  34256752 cctaaaccctaaagttgcc 34256770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 210
Target Start/End: Complemental strand, 44303974 - 44303758
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||||||||||||| |||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||| |||||| || ||||||||    
T  44303974 actctccaatccactatcaa-tgagttctta-aaaagagatacaaaaggattacaagaaattagctttgacaagttcacaaagaacaa-ccttaatttct 44303878  T
Q  100 accctttt---cccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaa 188  Q
    ||||||||   |||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| |||||||||||    
T  44303877 accctttttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaa 44303779  T
Q  189 agaaccctaaaccctagagttg 210  Q
    || ||||||||||||| |||||    
T  44303778 ag-accctaaaccctaaagttg 44303758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 2 - 211
Target Start/End: Complemental strand, 17982772 - 17982556
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||||||||||||| ||||||||| |||| | ||||||||||| ||||||||||||| ||| ||||||||||||| |||||| |||||||||||    
T  17982772 actctccaatccactatcaa-tgagttcttccaaa-gagatacaaaagggttacaagaaattaactttgacaagttcacaaagaacaa-ccctaatttct 17982676  T
Q  100 accc--ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaa 189  Q
    ||||  |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| ||||||||||||    
T  17982675 acccttttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaa 17982577  T
Q  190 gaaccctaaaccctagagttgc 211  Q
    | ||||||||||||| ||||||    
T  17982576 g-accctaaaccctaaagttgc 17982556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 211
Target Start/End: Complemental strand, 31218369 - 31218160
Alignment:
Q  9 aatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttctacc--ct 104  Q
    ||||||||||||| ||||||||| |||| | ||||||||||| ||||||||||||||| ||||||||||||||| |||| ||||||||||||||||   |    
T  31218369 aatccactatcaa-tgagttcttccaaa-gagatacaaaagggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttctaccattt 31218273  T
Q  105 tttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaaccct 196  Q
    ||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| ||||||||||||| |||||    
T  31218272 tttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accct 31218175  T
Q  197 aaaccctagagttgc 211  Q
    |||||||| ||||||    
T  31218174 aaaccctaaagttgc 31218160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 2 - 211
Target Start/End: Original strand, 19945408 - 19945625
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaag--gttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttc 98  Q
    ||||| |||||||||||||| ||||||||| |||| | ||||||||||  |||||||||||||||| ||||||||||||||| |||| |||| |||||||    
T  19945408 actctccaatccactatcaa-tgagttcttccaaa-gagatacaaaagtggttacaagaaattagctttgacaagttcacaaagaac-aaccataatttc 19945504  T
Q  99 taccc--ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaa 188  Q
    |||||  |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| |||||||||||    
T  19945505 tacccttttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccgacccaagaga-actctaatcaa 19945603  T
Q  189 agaaccctaaaccctagagttgc 211  Q
    || || |||||||||| ||||||    
T  19945604 ag-actctaaaccctaaagttgc 19945625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 118
Target Start/End: Complemental strand, 44353908 - 44353796
Alignment:
Q  6 ttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc 103  Q
    |||||||||||||||| |||||||||||||| | |||||||| | ||||||||||||||||||  |||||||||||| |||| |||||||||||||||||    
T  44353908 ttcaatccactatcaa-tgagttcttacaaa-gagatacaaatgtgttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttctaccc 44353812  T
Q  104 -ttttcccaatctcac 118  Q
     |||||||||||||||    
T  44353811 attttcccaatctcac 44353796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 9765863 - 9765745
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || ||||||||||||||| ||| |||| |||||| |||| ||||||||||||||    
T  9765863 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagctttgccaagctcacaaagaac-aaccctaatttcta 9765767  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  9765766 cccattttcccaatctcaccaa 9765745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 15212904 - 15212786
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||| |||||| |||||||||||||| | |||||||| || |||||||||||||||||  |||||||||||| |||| ||||||||||||||    
T  15212904 ctctccaatccattatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 15212808  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  15212807 cccattttcccaatctcaccaa 15212786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 27811396 - 27811278
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    ||||||||||||||||||| || ||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| ||||||||||||||    
T  27811396 ctcttcaatccactatcaa-tgggttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 27811300  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  27811299 cccattttcccaatctcaccaa 27811278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 42498312 - 42498193
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| |  |||||||||| |||||||||||||||||  |||||||||||| |||| ||||||||||||||    
T  42498312 ctctccaatccactatcaa-tgagttcttacaaa-gaaatacaaaagggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 42498216  T
Q  101 cc--cttttcccaatctcaccaa 121  Q
    ||   ||||||||||||||||||    
T  42498215 cctttttttcccaatctcaccaa 42498193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 3303720 - 3303838
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||| | ||||||||||||||| ||  ||||| |||||| ||||||| | |||||||||    
T  3303720 ctcttcaatccactatc-aatgagttcttac-aaagagatacaaatgagttacaagaaattaggttaaacaagctcacaaagaacaaa-cttaatttcta 3303816  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  3303817 cccattttcccaatctcaccaa 3303838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 4283642 - 4283524
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||  ||||| ||||||  ||| ||||||||||||||    
T  4283642 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaaaaac-aaccctaatttcta 4283546  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  4283545 cccattttcccaatctcaccaa 4283524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 30291725 - 30291606
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||||||||| || |||||||||| | |||||||| | |||||||||||||||||| | |||| |||||| ||||||| |||||||||||    
T  30291725 ctctccaatccactatcaaa-gaattcttacaaa-gtgatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaacctaatttcta 30291628  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||| ||||||||||||    
T  30291627 cccattttctcaatctcaccaa 30291606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 33352268 - 33352150
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||| || | ||||||||||| |||||| ||||||||| ||    
T  33352268 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattaggttcaacaagttcacaaagaacaa-ccctaattttta 33352172  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  33352171 cccattttcccaatctcaccaa 33352150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 1746268 - 1746371
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||||||||||||| |||||||||   |||| ||||||||||| ||||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  1746268 actctccaatccactatcaa-tgagttcttc--aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttct 1746363  T
Q  100 accctttt 107  Q
    ||| ||||    
T  1746364 accttttt 1746371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 42435046 - 42435159
Alignment:
Q  8 caatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-t 104  Q
    |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| ||||||||||||||||| |    
T  42435046 caatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccat 42435142  T
Q  105 tttcccaatctcaccaa 121  Q
    ||| |||||||||||||    
T  42435143 ttttccaatctcaccaa 42435159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 30143458 - 30143346
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| ||||||||||||||    
T  30143458 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 30143362  T
Q  101 ccc-ttttcccaatct 115  Q
    ||| ||||||||||||    
T  30143361 cccattttcccaatct 30143346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 43036535 - 43036423
Alignment:
Q  9 aatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-tt 105  Q
    ||||||||||||| |||||||||||||| | |||||||| |  |||||||||||||| || | ||||||||||| |||||| ||||||||||||||| ||    
T  43036535 aatccactatcaa-tgagttcttacaaa-gagatacaaatgaattacaagaaattagtttcaacaagttcacaaagaacaa-ccctaatttctacccatt 43036439  T
Q  106 ttcccaatctcaccaa 121  Q
    ||||||||||||||||    
T  43036438 ttcccaatctcaccaa 43036423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 12702684 - 12702787
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||| |||||| |||||||||||||| | || |||||||| ||||||||||||||||| | ||||||||||| |||||| ||||||||||||    
T  12702684 ctctccaatccaatatcaa-tgagttcttacaaa-gagacacaaaagggttacaagaaattagcttcaacaagttcacaaagaacaa-ccctaatttcta 12702780  T
Q  101 ccctttt 107  Q
    |||||||    
T  12702781 ccctttt 12702787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 18141938 - 18141821
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||||||||| ||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| ||||||  |||||||||||    
T  18141938 ctctccaatccactatcaaa-gagttcttacaaa-gtgatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaa--cctaatttcta 18141843  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||| ||||||||||||    
T  18141842 cccattttcacaatctcaccaa 18141821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 4731776 - 4731658
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||| || | |||| |||||| || ||| ||||||||||||    
T  4731776 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattaggttcaacaagctcacaaagagcaa-ccctaatttcta 4731680  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  4731679 cccattttcccaatctcaccaa 4731658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 19491749 - 19491867
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    ||||| |||||||||||||  ||||||||||||| | |||||||| || |||||||||||||| || | |||| |||||| ||||||||| |||||||||    
T  19491749 ctctttaatccactatcaac-gagttcttacaaa-gagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaacc-taatttcta 19491845  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  19491846 cccattttcccaatctcaccaa 19491867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 40328898 - 40328782
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaa--ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    |||| |||||||||||||| ||||||||||| |||| |||||||||   ||||||||||||||| ||  ||||| |||||| ||||||| ||||||||||    
T  40328898 ctctccaatccactatcaa-tgagttcttac-aaagagatacaaaatgagttacaagaaattagtttaaacaagctcacaaagaacaaa-cctaatttct 40328802  T
Q  100 accc-ttttcccaatctcac 118  Q
    |||| |||||||||||||||    
T  40328801 acccattttcccaatctcac 40328782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 1292519 - 1292631
Alignment:
Q  9 aatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-tt 105  Q
    ||||||||||||| |||||||||||||| | |||||||| | ||||||||||||||||||  ||||| |||||| ||||||| | |||||||||||| ||    
T  1292519 aatccactatcaa-tgagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaa-cttaatttctacccatt 1292615  T
Q  106 ttcccaatctcaccaa 121  Q
    ||| ||||||||||||    
T  1292616 ttctcaatctcaccaa 1292631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 18655512 - 18655400
Alignment:
Q  9 aatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-tt 105  Q
    ||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| |||| |||||||||||| ||    
T  18655512 aatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccttaatttctacccatt 18655416  T
Q  106 ttcccaatctcaccaa 121  Q
    ||| ||||||||||||    
T  18655415 ttctcaatctcaccaa 18655400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 40321198 - 40321082
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||||||||| ||||| ||||||| | ||||| || || ||||||||||||| ||| | |||| ||||||||||||| ||||||||||||    
T  40321198 ctctccaatccactatcaaa-gagtttttacaaa-gagatactaatgggttacaagaaattaacttcaacaagctcacaatgaacaa-ccctaatttcta 40321102  T
Q  101 ccc-ttttcccaatctcacc 119  Q
    ||| ||||||||||||||||    
T  40321101 cccattttcccaatctcacc 40321082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 8965758 - 8965859
Alignment:
Q  21 aatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctcac 118  Q
    |||||||||||||||| | |||| |||||| ||| ||||||||| ||| | |||  ||| || ||||||||||||||||||||| |||||||||||||||    
T  8965758 aatgagttcttacaaa-gagatataaaagggttataagaaattaacttcaacaaactcataaagaacaaaccctaatttctacctttttcccaatctcac 8965856  T
Q  119 caa 121  Q
    |||    
T  8965857 caa 8965859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 40221863 - 40221745
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||||||||  ||||||||||||| | |||||||| || |||||||||||||| || | |||| |||||| |||||| ||||||||||||    
T  40221863 ctctccaatccactatcaac-gagttcttacaaa-gagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaa-ccctaatttcta 40221767  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| |||| |||||||||||||    
T  40221766 cccattttaccaatctcaccaa 40221745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 41366664 - 41366778
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaa-aggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||||| |||||||||||||| ||||||||||||| |||||| |||||||||||||  ||||| | |||| ||||||| | |||||||||    
T  41366664 ctctccaatccactat-aaatgagttcttac-aaagggatacaaataggttaaaagaaattagcttaaacaagcttacaaagaacaaa-cataatttcta 41366760  T
Q  101 ccc-ttttcccaatctca 117  Q
    ||| ||||| ||||||||    
T  41366761 cccattttctcaatctca 41366778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 6599084 - 6598975
Alignment:
Q  9 aatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-tt 105  Q
    ||||||||||||| ||||||||||||||||  ||||||| || |||||||||||||||||  ||||| || ||| ||||||| | |||||||||||| ||    
T  6599084 aatccactatcaa-tgagttcttacaaaagt-atacaaatgggttacaagaaattagcttaaacaagctcgcaaagaacaaa-cttaatttctacccatt 6598988  T
Q  106 ttcccaatctcac 118  Q
    |||||||||||||    
T  6598987 ttcccaatctcac 6598975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 6674537 - 6674428
Alignment:
Q  9 aatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-tt 105  Q
    ||||||||||||| ||||||||||||||||  ||||||| || |||||||||||||||||  ||||| || ||| ||||||| | |||||||||||| ||    
T  6674537 aatccactatcaa-tgagttcttacaaaagt-atacaaatgggttacaagaaattagcttaaacaagctcgcaaagaacaaa-cttaatttctacccatt 6674441  T
Q  106 ttcccaatctcac 118  Q
    |||||||||||||    
T  6674440 ttcccaatctcac 6674428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 5689389 - 5689275
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || ||||||||||||||| |||||||| |||||| | ||  ||| |||||||||    
T  5689389 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagctttgacaagctcacaaagcac-caccttaatttcta 5689293  T
Q  101 ccc-ttttcccaatctca 117  Q
    ||| |||| |||||||||    
T  5689292 cccatttttccaatctca 5689275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 1822365 - 1822297
Alignment:
Q  49 ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctc 116  Q
    |||||||||||||||||||  ||||| |||||| ||||||||| ||||||||| ||||||  |||||||    
T  1822365 ggttacaagaaattagcttcaacaagctcacaaagaacaaaccataatttctatcctttttgcaatctc 1822297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 1856810 - 1856742
Alignment:
Q  49 ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctc 116  Q
    |||||||||||||||||||  ||||| |||||| ||||||||| ||||||||| ||||||  |||||||    
T  1856810 ggttacaagaaattagcttcaacaagctcacaaagaacaaaccataatttctatcctttttgcaatctc 1856742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 41364927 - 41365011
Alignment:
Q  35 aaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacc-cttttcccaatctca 117  Q
    ||||||||||||| | ||||||||||||||||||  ||||  |||||| ||||||| |||||||||||||  ||||||||||||||    
T  41364927 aaagggatacaaatgtgttacaagaaattagcttaaacaaactcacaaagaacaaa-cctaatttctaccaattttcccaatctca 41365011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 103
Target Start/End: Complemental strand, 4162598 - 4162516
Alignment:
Q  21 aatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc 103  Q
    |||||||||||||||| | |||||||| | ||||||||||||||||||  |||||||| ||| ||||||| ||||| ||||||||    
T  4162598 aatgagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagttctcaaagaacaaa-cctaacttctaccc 4162516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 6813771 - 6813818
Alignment:
Q  49 ggttacaagaaattagcttgacaagttcacaatgaacaaaccctaattt 97  Q
    |||||||||||||||||||| |||| |||||| ||||||| ||||||||    
T  6813771 ggttacaagaaattagcttg-caagctcacaaagaacaaaacctaattt 6813818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 10240227 - 10240159
Alignment:
Q  49 ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctc 116  Q
    |||||||||||||||| ||  ||||| |||||| |||||||||| |||||||| | || ||||||||||    
T  10240227 ggttacaagaaattagattcaacaagctcacaaagaacaaacccaaatttctatctttgtcccaatctc 10240159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 117
Target Start/End: Complemental strand, 11384098 - 11383989
Alignment:
Q  8 caatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-t 104  Q
    ||||||| |||||| || ||||||||||| | |||||||| | ||||||||||||||||||  ||||  |||||| |||| ||||||||||||||||| |    
T  11384098 caatccagtatcaa-tgggttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaaactcacaaagaac-aaccctaatttctacccat 11384002  T
Q  105 tttcccaatctca 117  Q
    ||| |||||||||    
T  11384001 ttttccaatctca 11383989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 116
Target Start/End: Original strand, 29796413 - 29796485
Alignment:
Q  45 aaaaggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctc 116  Q
    |||| |||||||||||| ||||| | ||||||| | | ||||||||| | |||||||| ||||||||||||||    
T  29796413 aaaatgttacaagaaatcagcttcaacaagttctccaagaacaaaccttgatttctactcttttcccaatctc 29796485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 183; Significance: 4e-99; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 8395723 - 8395508
Alignment:
Q  1 tactcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  8395723 tactctccaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagcttgacatgttcactatgaacaaaccctaatttcta 8395624  T
Q  101 cccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaac 200  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8395623 cccttttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaac 8395526  T
Q  201 cctagagttgcccctttg 218  Q
    ||||||| | ||||||||    
T  8395525 cctagagcttcccctttg 8395508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 8393514 - 8393299
Alignment:
Q  1 tactcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  8393514 tactctccaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagcttgacatgttcactatgaacaaaccctaatttcta 8393415  T
Q  101 cccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaac 200  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  8393414 cccttttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccataaac 8393317  T
Q  201 cctagagttgcccctttg 218  Q
    ||||||| | ||||||||    
T  8393316 cctagagcttcccctttg 8393299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 7122803 - 7122585
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttct 99  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  7122803 tactctccaatccactatcaaatgagttctttacaaaaggaatacaagaggttacaagaaattagtttgacaagttcactatgaacaaaccctaatttct 7122704  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaa 199  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7122703 acccctttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaa 7122604  T
Q  200 ccctagagttgcccctttg 218  Q
    |||||||| | ||||||||    
T  7122603 ccctagagcttcccctttg 7122585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 7125022 - 7124804
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttct 99  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  7125022 tactctccaatccactatcaaatgagttctttacaaaaggaatacaagaggttacaagaaattagtttgacaagttcactatgaacaaaccctaatttct 7124923  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaa 199  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7124922 acccctttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaa 7124823  T
Q  200 ccctagagttgcccctttg 218  Q
    |||||||| | ||||||||    
T  7124822 ccctagagcttcccctttg 7124804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 5138410 - 5138193
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttc 98  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  5138410 tactctccaatccactatcaaatgagttctttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttc 5138311  T
Q  99 tacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaa 198  Q
    ||||| |||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  5138310 tacccctttcccaatctcaccaagacactcaatgattctctct--acaaggtatttcccatgttttcaacccaagagatactctaatcaaagaaccctaa 5138213  T
Q  199 accctagagttgcccctttg 218  Q
    ||||||||| | ||||||||    
T  5138212 accctagagcttcccctttg 5138193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 5136185 - 5135967
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaa-gttcacaatgaacaaaccctaatttc 98  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  5136185 tactctccaatccactatcaaatgagttctttacaaaaggaatacaagaggttacaagaaattagcttgacaatgttcactatgaacaaaccctaatttc 5136086  T
Q  99 tacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatg-ttttctacccaagagatactctaatcaaagaacccta 197  Q
    ||||| ||||||||||||||||||||||||||||||||||||  |||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||    
T  5136085 tacccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtatttcccatgtttttcaacccaagagatactctaatcaaagaacccta 5135988  T
Q  198 aaccctagagttgcccctttg 218  Q
    |||||||||| | ||||||||    
T  5135987 aaccctagagcttcccctttg 5135967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 2 - 209
Target Start/End: Original strand, 31495365 - 31495573
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg--ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttc 98  Q
    ||||| ||||| |||||||| |||||||||||||||| ||||||||| |  |||||||||||||| || |||||||||||||||||||| || |||||||    
T  31495365 actctccaatcaactatcaa-tgagttcttacaaaagagatacaaaaagagttacaagaaattagatttgacaagttcacaatgaacaatcc-taatttc 31495462  T
Q  99 tacccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaacccta 197  Q
    ||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||  | ||||||||||  |||||||||||| ||  ||    
T  31495463 tacccttttcccaatctcaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaag-actata 31495561  T
Q  198 aaccctagagtt 209  Q
    ||||||||||||    
T  31495562 aaccctagagtt 31495573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 211
Target Start/End: Original strand, 13992342 - 13992551
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||||||||||||| ||||||||||||| ||  ||||||||| ||||||||||||||| || ||||||||||||| |||||| |||||||||||    
T  13992342 actctccaatccactatcaa-tgagttcttacaagag--atacaaaagagttacaagaaattagatttgacaagttcacaaagaacaa-ccctaatttct 13992437  T
Q  100 accctttt--cccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaaccct 196  Q
    ||||||||  |||||||||||||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| ||||||||||||| |||||    
T  13992438 acccttttttcccaatctcaccaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagagactctaatcaaag-accct 13992536  T
Q  197 aaaccctagagttgc 211  Q
    |||||||| ||||||    
T  13992537 aaaccctaaagttgc 13992551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 210
Target Start/End: Original strand, 29999856 - 30000069
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||||  |||||||||| |||||||||||||||||| |||| |||||||| |||||| ||||||||||||    
T  29999856 ctctccaatccactatcaa-tgagttcttacaaaaaagatacaaaagagttacaagaaattagctttgacatgttcacaaagaacaa-ccctaatttcta 29999953  T
Q  101 cccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttttc-tacccaagagatactctaatcaaagaa 192  Q
    ||||||||||||||||||       |||||||||||| |||| || ||   |||||||||| | |||||| |  |||||||||| ||||||||||||| |    
T  29999954 cccttttcccaatctcaccaatgaacaagacactcaacgattttcactcaccaaggtgtttacaatgtttccaaacccaagaga-actctaatcaaag-a 30000051  T
Q  193 ccctaaaccctagagttg 210  Q
    |||||||||||| |||||    
T  30000052 ccctaaaccctaaagttg 30000069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 56178687 - 56178805
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | ||||||||||| ||||||||||||||||| | ||||||||||| |||||| ||||||||||||    
T  56178687 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagggttacaagaaattagcttcaacaagttcacaaagaacaa-ccctaatttcta 56178783  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  56178784 ccctttttcccaatctcaccaa 56178805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 9927508 - 9927626
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||  |||||||||||| |||| ||||||||||||||    
T  9927508 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 9927604  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  9927605 cccattttcccaatctcaccaa 9927626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 52095412 - 52095530
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||||||||| || |||||||||| | |||||||| || ||||||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  52095412 ctctccaatccactatcaaa-gatttcttacaaa-gagatacaaatgggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttcta 52095508  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  52095509 cccattttcccaatctcaccaa 52095530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 26364354 - 26364236
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||||| || |||||||||||||| | |||||||| | |||||||||||||||||| | ||||||||||| |||||| ||||||||||||    
T  26364354 ctctccaatccactattaa-tgagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagttcacaaagaacaa-ccctaatttcta 26364258  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  26364257 cccattttcccaatctcaccaa 26364236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 36994642 - 36994524
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| |||||||||| || |||||||||||||||||  ||||| |||||| |||| |||| |||||||||    
T  36994642 ctctccaatccactatcaa-tgagttcttacaaa-gggatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccttaatttcta 36994546  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  36994545 cccattttcccaatctcaccaa 36994524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 40632563 - 40632445
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaa-aggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||  ||||| |||||| |||| ||| ||||||||||    
T  40632563 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaataggttacaagaaattagcttcaacaagctcacaaagaac-aactctaatttcta 40632467  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  40632466 cccattttcccaatctcaccaa 40632445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 37229771 - 37229890
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaa-agggatacaaaaggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||||| ||||||||||||||||| ||  ||| ||| |||||||| ||||| |||| | |||| |||||| ||||| |||||||||||||    
T  37229771 ctctccaatccactat-aaatgagttcttacaaagagatataaaaagggttacaacaaatttgctttaacaagctcacaaagaacacaccctaatttcta 37229869  T
Q  101 cccttttcccaatctcaccaa 121  Q
    || ||||||||||||||||||    
T  37229870 ccattttcccaatctcaccaa 37229890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 2209832 - 2209717
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaa--ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    |||| |||||||||||||| |||||||||||||| | |||||||||  |||||||||||||||||||  ||||| |||||| ||| ||||||||||||||    
T  2209832 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaatgggttacaagaaattagcttcaacaagctcacaaagaa-aaaccctaatttct 2209736  T
Q  100 accc-ttttcccaatctca 117  Q
    |||| ||||||||||||||    
T  2209735 acccattttcccaatctca 2209717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 41964534 - 41964415
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaa--ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttct 99  Q
    |||| |||||||||||||| |||||||||||||| |||||||||||  |||||||| |||||||||| | |||| |||||| |||||| |||||||||||    
T  41964534 ctctccaatccactatcaa-tgagttcttacaaa-gggatacaaaatgggttacaataaattagcttaaacaagctcacaaagaacaa-ccctaatttct 41964438  T
Q  100 accc-ttttcccaatctcaccaa 121  Q
    |||| |||||||||| |||||||    
T  41964437 acccattttcccaatttcaccaa 41964415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 46703619 - 46703500
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaa--ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    |||| ||||||||||| ||||||||||||||||| | |||||||||  |||||||||||||||||||  ||||| |||||| |||| |||||||||||||    
T  46703619 ctctccaatccactat-aaatgagttcttacaaa-gagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttct 46703523  T
Q  100 ac-ccttttcccaatctcaccaa 121  Q
    || | ||||||||||||||||||    
T  46703522 actcattttcccaatctcaccaa 46703500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 54199973 - 54200074
Alignment:
Q  21 aatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctca 117  Q
    |||||||||||||||| | |||||||| || |||||||||||||||||  |||||||||||| |||| ||||||||||||||||| ||||||||||||||    
T  54199973 aatgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttctacccattttcccaatctca 54200070  T
Q  118 ccaa 121  Q
    ||||    
T  54200071 ccaa 54200074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 119
Target Start/End: Original strand, 46147446 - 46147557
Alignment:
Q  8 caatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-t 104  Q
    ||||||||||||||| ||||||||||||| | |||||||| | ||||||||||||||||||  ||||| ||||||||||| ||||||||||||||||| |    
T  46147446 caatccactatcaaa-gagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacaatgaac-aaccctaatttctacccat 46147542  T
Q  105 tttcccaatctcacc 119  Q
    ||| |||||||||||    
T  46147543 ttttccaatctcacc 46147557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 12073510 - 12073392
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| | ||||||| |||||||||| | |||| |||||| ||||||||| |||||||||    
T  12073510 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgagttacaataaattagcttcaacaagctcacaaagaacaaacc-taatttcta 12073414  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  12073413 cccattttcccaatctcaccaa 12073392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 12739600 - 12739718
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| ||||||| ||||||  | ||||||| || ||||||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  12739600 ctctccaatccactatcaa-tgagttcatacaaatag-atacaaatgggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttcta 12739696  T
Q  101 -cccttttcccaatctcaccaa 121  Q
     || ||||||||||||||||||    
T  12739697 tccattttcccaatctcaccaa 12739718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 12743975 - 12744073
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || ||||||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  12743975 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttcta 12744071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 12744097 - 12744195
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || ||||||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  12744097 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttcta 12744193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 12745364 - 12745462
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || ||||||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  12745364 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttcta 12745460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 12745486 - 12745604
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||| || ||||||||||||| |||| ||||||||||||||    
T  12745486 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagttttgacaagttcacaaagaac-aaccctaatttcta 12745582  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| |||||| |||||| ||||    
T  12745583 cccattttcctaatctcgccaa 12745604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 12747806 - 12747924
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| ||||||| ||||||  | ||||||| || ||||||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  12747806 ctctccaatccactatcaa-tgagttcatacaaatag-atacaaatgggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttcta 12747902  T
Q  101 -cccttttcccaatctcaccaa 121  Q
     || ||||||||||||||||||    
T  12747903 tccattttcccaatctcaccaa 12747924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 34570464 - 34570582
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||  || |||||||||||||||||  |||||||||||| |||| ||||||||||||||    
T  34570464 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaattgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 34570560  T
Q  101 cc-cttttcccaatctcaccaa 121  Q
    ||  ||||||||||||||||||    
T  34570561 cctattttcccaatctcaccaa 34570582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 37740743 - 37740625
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||  |||||||||||| |||| ||||||||||| ||    
T  37740743 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttata 37740647  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| |||||| |||||||||||    
T  37740646 ccctttttccaaatctcaccaa 37740625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 45687232 - 45687351
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| ||||||||||||||  | ||||||| | |||| ||||||||||||| |||||| |||||| ||||||| ||||||||||     
T  45687232 ctctccaatccactatcaa-tgagttcttacaaatag-atacaaatgagttataagaaattagctttgacaagctcacaaagaacaaaacctaatttctt 45687329  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  45687330 cccattttcccaatctcaccaa 45687351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 5207897 - 5208003
Alignment:
Q  8 caatccactatcaaatgagttcttacaaa-agggatacaaaaggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccctt 105  Q
    |||||||||||||| |||||||||||||| ||  ||||||  |||| ||| |||||||||| | ||||||||||| ||||||||||||||||||||||||    
T  5207897 caatccactatcaa-tgagttcttacaaatagatatacaag-ggttgcaataaattagcttcaacaagttcacaaagaacaaaccctaatttctaccctt 5207994  T
Q  106 ttcccaatc 114  Q
    || ||||||    
T  5207995 tttccaatc 5208003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 54883133 - 54883020
Alignment:
Q  8 caatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-t 104  Q
    |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||  ||||| ||||||  ||| ||||||||||||||||| |    
T  54883133 caatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaaaaac-aaccctaatttctacccat 54883037  T
Q  105 tttcccaatctcaccaa 121  Q
    |||||||||||||||||    
T  54883036 tttcccaatctcaccaa 54883020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 102
Target Start/End: Original strand, 5370141 - 5370232
Alignment:
Q  11 tccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagc--ttgacaagttcacaatgaacaaaccctaatttctacc 102  Q
    ||||||||||| |||||||||||||| | ||||||||||| |||||||||||||||  ||||||||||||||| |||| ||||||||||||||||    
T  5370141 tccactatcaa-tgagttcttacaaa-gagatacaaaagggttacaagaaattagcttttgacaagttcacaaagaac-aaccctaatttctacc 5370232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 12119658 - 12119540
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||||| ||||||||||||   |||| ||||||||||| |||||||||||||||||  | |||||||||| ||||||||| |||||||||    
T  12119658 ctctccaatccactat-aaatgagttctttacaaagagatacaaaagggttacaagaaattagcttcaaaaagttcacaaagaacaaaccataatttcta 12119560  T
Q  101 c-ccttttcccaatctcacc 119  Q
    | | |||| |||||||||||    
T  12119559 ctcttttttccaatctcacc 12119540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 47038461 - 47038577
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctac 101  Q
    |||| |||||||||||||| ||||| ||||||||  | ||||||| | ||||||||||||||||| | |||| |||||| |||||| |||||||||||||    
T  47038461 ctctccaatccactatcaa-tgagtccttacaaacag-atacaaatgattacaagaaattagcttcaacaagctcacaaagaacaa-ccctaatttctac 47038557  T
Q  102 ccttttcccaatctcaccaa 121  Q
    || ||| |||||||||||||    
T  47038558 ccattttccaatctcaccaa 47038577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 48143161 - 48143042
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| ||||||||||  || | ||||||||||| |||||||||||||||||  |||||||||||| |||| ||||||||||||||    
T  48143161 ctctccaatccactatcaa-tgagttcttatgaa-gagatacaaaagggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 48143065  T
Q  101 cc--cttttcccaatctcaccaa 121  Q
    ||   ||||||||||||||||||    
T  48143064 cctttttttcccaatctcaccaa 48143042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 4588077 - 4587958
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | ||||||||||| |||||||||||||||||  ||||| | |||| ||||||| | |||||||||    
T  4588077 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagggttacaagaaattagcttcaacaagcttacaaagaacaaatcttaatttcta 4587980  T
Q  101 cc-cttttcccaatctcaccaa 121  Q
    ||  |||||||||| |||||||    
T  4587979 ccttttttcccaatttcaccaa 4587958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 8665526 - 8665408
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||  ||||| || ||| |||| ||||||||||||||    
T  8665526 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctctcaaagaac-aaccctaatttcta 8665430  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| |||||||| |||||||||    
T  8665429 cccattttcccattctcaccaa 8665408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 26175686 - 26175804
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||| || | |||| |||||| |||||| |||||||||||     
T  26175686 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaa-ccctaatttctc 26175782  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  26175783 cccattttcccaatctcaccaa 26175804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 36463439 - 36463557
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||| ||||| ||||||||||||| | |||||||| || |||||||||||||||||  ||||| ||||||||||| | ||||||||||||    
T  36463439 ctctccaatccactgtcaaa-gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaac-agccctaatttcta 36463535  T
Q  101 -cccttttcccaatctcaccaa 121  Q
     || ||||||||||||||||||    
T  36463536 tccattttcccaatctcaccaa 36463557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 52082715 - 52082825
Alignment:
Q  11 tccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-tttt 107  Q
    |||||||||||| || |||||||||| | |||||||| || |||||||||||||| || ||||||||||||| |||| ||||||| ||||||||| ||||    
T  52082715 tccactatcaaa-gatttcttacaaa-gagatacaaatgggttacaagaaattagttttgacaagttcacaaagaac-aaccctagtttctacccatttt 52082811  T
Q  108 cccaatctcaccaa 121  Q
    ||||||||||||||    
T  52082812 cccaatctcaccaa 52082825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 379498 - 379383
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| | |||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| ||||||| |||||||||||    
T  379498 ctctccaatccactatcaatt-agttcttacaaa-gcgatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaa-cctaatttcta 379402  T
Q  101 ccc-ttttcccaatctcac 118  Q
    ||| ||||| |||||||||    
T  379401 cccattttctcaatctcac 379383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 6656074 - 6655975
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| | ||||||||||||||||||  |||||||||||| |||| |||| |||||||||    
T  6656074 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagttcacaaagaac-aaccttaatttcta 6655978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 24969230 - 24969112
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| | |||||||||||| | |||||||| | ||||||||||||||||||  ||||| |||||| |||||||  ||||||||||    
T  24969230 ctctccaatccactatcaatt-agttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaa-tctaatttcta 24969134  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| |||| |||||||||||||    
T  24969133 cccatttttccaatctcaccaa 24969112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 26699492 - 26699596
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||| ||| ||||||||||||   |||| |||||||||| |||||||||||||||||| | |||| |||||| |||||||||||||| | ||    
T  26699492 ctctccaatccattat-aaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctcacaaagaacaaaccctaatctata 26699590  T
Q  101 cccttt 106  Q
    ||||||    
T  26699591 cccttt 26699596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 27417015 - 27417133
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||| ||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| ||||||||||||||    
T  27417015 ctctccaatccactatcaa-tgagtttttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 27417111  T
Q  101 c-ccttttcccaatctcaccaa 121  Q
    | | |||| |||||||||||||    
T  27417112 cacattttaccaatctcaccaa 27417133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 41639544 - 41639426
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||| | ||||||||||||||  | ||||||| || |||||||||||||||||  | |||||||||| |||| ||||||||||||||    
T  41639544 ctctccaatccactatcga-tgagttcttacaaatag-atacaaatgggttacaagaaattagcttcaaaaagttcacaaagaac-aaccctaatttcta 41639448  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| |||||||||||| |||||    
T  41639447 cccattttcccaatcttaccaa 41639426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 48893688 - 48893810
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttc----acaatgaacaaaccctaatt 96  Q
    |||| ||||||||||||||| ||||||||||||| | |||||||| | ||||||||||||||||||  ||||| ||    ||||||||| ||||||||||    
T  48893688 ctctccaatccactatcaaa-gagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacaaacaatgaac-aaccctaatt 48893784  T
Q  97 tctaccc-ttttcccaatctcaccaa 121  Q
    ||||||| ||||| ||||||||||||    
T  48893785 tctacccattttctcaatctcaccaa 48893810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 6542229 - 6542349
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggtta-caagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||||||||  ||||||||||||| | ||||||||||| || ||||||||||| || | |||| |||||| ||||||| |||||||||||    
T  6542229 ctctccaatccactatcaac-gagttcttacaaa-gagatacaaaaggctaacaagaaattagtttcaacaagctcacaaagaacaaatcctaatttcta 6542326  T
Q  101 cc--cttttcccaatctcaccaa 121  Q
    ||   ||||||||||||| ||||    
T  6542327 ccattttttcccaatctccccaa 6542349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 5429797 - 5429679
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| ||||||||||||||  | ||||||| || |||||||||||||||||  ||||| |||| | |||  ||||||||||||||    
T  5429797 ctctccaatccactatcaa-tgagttcttacaaatag-atacaaatgggttacaagaaattagcttcaacaagctcacgaagaa-taaccctaatttcta 5429701  T
Q  101 c-ccttttcccaatctcaccaa 121  Q
    | | ||||||||||||||||||    
T  5429700 ctcattttcccaatctcaccaa 5429679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 8648257 - 8648139
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaa-aggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||| |||||| ||||||||||| |||| ||||||||  ||||| |||||||||||||  ||||  ||||||||||| ||||||||||||||    
T  8648257 ctctccaatccaatatcaa-tgagttcttac-aaagagatacaaatgggttataagaaattagcttcaacaaactcacaatgaac-aaccctaatttcta 8648161  T
Q  101 -cccttttcccaatctcaccaa 121  Q
     || |||||||| |||||||||    
T  8648160 tccattttcccattctcaccaa 8648139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 31474269 - 31474150
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||| |||||||| |||||||||||||| | |||||||| | ||||||||||||||||||  ||||  ||| || ||||||  |||||||||||    
T  31474269 ctctccaatcaactatcaa-tgagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaaactcaaaaagaacaagacctaatttcta 31474172  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||| ||||||||||||    
T  31474171 cccattttctcaatctcaccaa 31474150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 35662559 - 35662441
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| | ||||||||||||||||||  ||||  ||| || |||| ||||||||||||||    
T  35662559 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaaactcataaagaac-aaccctaatttcta 35662463  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||  ||||||||||||    
T  35662462 cccattttttcaatctcaccaa 35662441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 48142473 - 48142542
Alignment:
Q  49 ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctca 117  Q
    |||||||||||| |||||| | |||| |||||| ||||||||||||||||||| | | ||||||||||||    
T  48142473 ggttacaagaaactagcttcaacaagctcacaaagaacaaaccctaatttctatcatgttcccaatctca 48142542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 41639353 - 41639263
Alignment:
Q  33 caaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 121  Q
    |||||| |||||||| || |||||||||||||||||  | ||||| |||| |||| ||||||||||||||||| |||||||||||| |||||    
T  41639353 caaaagagatacaaatgggttacaagaaattagcttcaaaaagtttacaaagaac-aaccctaatttctacccattttcccaatcttaccaa 41639263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 1983309 - 1983252
Alignment:
Q  49 ggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctaccctttt 107  Q
    |||||||||||||||||||| |||| |||||| ||||||| | ||||||||| ||||||    
T  1983309 ggttacaagaaattagcttg-caagctcacaaagaacaaaacataatttctatcctttt 1983252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 44967910 - 44967992
Alignment:
Q  35 aaagggatacaaaaggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctc 116  Q
    |||| |||||||| |||||||||||||| |||| | |||| || | | || |||| ||||||||||||| |||||||||||||    
T  44967910 aaagagatacaaatggttacaagaaattggcttcagcaagctctccaagagcaaaacctaatttctaccattttcccaatctc 44967992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 52467404 - 52467519
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaa-aggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||||  |||| |||| |||| ||||||||  |||||||||| ||||||||  ||||| |||||| ||||||| |||||||||||    
T  52467404 ctctccaatccactatcaaa-aagttattac-aaagtgatacaaatgggttacaagatattagcttcaacaagctcacaaagaacaaa-cctaatttcta 52467500  T
Q  101 ccc-ttttcccaatctcac 118  Q
    ||| ||||||||| |||||    
T  52467501 cccattttcccaacctcac 52467519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 50673897 - 50673960
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt 67  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| | ||||||||||||||||||    
T  50673897 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgagttacaagaaattagctt 50673960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 103
Target Start/End: Complemental strand, 5349980 - 5349929
Alignment:
Q  52 tacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc 103  Q
    |||||| ||||||||| ||||||||||||| ||||||| ||||||||||||||    
T  5349980 tacaaggaattagcttcgacaagttcacaaagaacaaa-cctaatttctaccc 5349929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 50262756 - 50262865
Alignment:
Q  8 caatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta-ccct 104  Q
    ||||| |||||||| |||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| |||| ||||||| | || |    
T  50262756 caatcaactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccgtaatttcgatccat 50262852  T
Q  105 tttcccaatctca 117  Q
    |||||||||||||    
T  50262853 tttcccaatctca 50262865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 121
Target Start/End: Original strand, 55085445 - 55085532
Alignment:
Q  35 aaagggatacaaaaggtt-acaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctcaccaa 121  Q
    |||| |||||||| |||| ||||||||||||||| | |||| |||||| |||||| || |||||||||||  ||| |||||||||||||    
T  55085445 aaagagatacaaatggtttacaagaaattagcttcaacaagctcacaaagaacaa-ccttaatttctacctattttccaatctcaccaa 55085532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 176; Significance: 6e-95; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 6266811 - 6266601
Alignment:
Q  1 tactcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  6266811 tactctccaatccactatcaaa-gagttcttacaaaagggatacaaaaggttacaagaaattagatttgacaagttcacaatgaacaaaccctaatttct 6266713  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaa 199  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6266712 acccttttcccaatctcaccaagacactcaatgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaa 6266613  T
Q  200 ccctagagttgc 211  Q
    ||||||||||||    
T  6266612 ccctagagttgc 6266601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 12647434 - 12647650
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttct 99  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12647434 tactctccaatccactatcaaatgagttctttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttct 12647533  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaa 199  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12647534 acccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaa 12647631  T
Q  200 ccctagagttgcccctttg 218  Q
    |||||||| | ||||||||    
T  12647632 ccctagagcttcccctttg 12647650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 13656080 - 13656220
Alignment:
Q  1 tactcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  13656080 tactctccaatccactatcaaatgagttcttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttcta 13656179  T
Q  101 cccttttcccaatctcaccaagacactcaatgattctctct 141  Q
    ||| |||||||||||||||||||||||||||||||||||||    
T  13656180 cccctttcccaatctcaccaagacactcaatgattctctct 13656220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 209
Target Start/End: Complemental strand, 32289665 - 32289477
Alignment:
Q  21 aatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctacccttttcccaatctcac 118  Q
    |||||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||||| |||||| ||||||||||||||||||||| ||||||||    
T  32289665 aatgagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttcacaaagaacaa-ccctaatttctacccttttcc-aatctcac 32289568  T
Q  119 caagacactcaatgattctctctttacaaggtgtttcccatgttttc-tacccaagagatactctaatcaaagaaccctaaaccctagagtt 209  Q
    ||||||||||||||||| || ||   |||||||||| |||||||| |  ||||||||||  |||||||||||| || |||||||||||||||    
T  32289567 caagacactcaatgattttcactcaccaaggtgtttaccatgtttccaaacccaagagaagctctaatcaaag-actctaaaccctagagtt 32289477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 209
Target Start/End: Original strand, 4484379 - 4484594
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaa-ggttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  4484379 actctccaatccactatcaa-tgagttcttacaaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttct 4484476  T
Q  100 acccttt--tcccaatctcac------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaag 190  Q
    |||||||  ||||||| ||||      |||||||||||||||||  | ||   |||||||||| | ||||||  | ||||||||||  ||||||||||||    
T  4484477 acccttttctcccaatttcaccaagaacaagacactcaatgatttacactcaccaaggtgtttacaatgtttcccaacccaagagaagctctaatcaaag 4484576  T
Q  191 aaccctaaaccctagagtt 209  Q
     ||||||||||||||||||    
T  4484577 -accctaaaccctagagtt 4484594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 30833465 - 30833342
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaa-ggttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||| | ||||||||||||||| |||| |||||||||||||    
T  30833465 actctccaatccactatcaa-tgagttcttacaaaagagatacaaaagggttacaagaaattaactttgacaagttcacaaagaac-aaccctaatttct 30833368  T
Q  100 acccttt--tcccaatctcaccaaga 123  Q
    |||||||  |||||||||||||||||    
T  30833367 acccttttctcccaatctcaccaaga 30833342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 212
Target Start/End: Original strand, 5723306 - 5723520
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaa-ggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | ||||||||| ||||||||||||||||||| ||||||||||||| |||||| || |||||||||    
T  5723306 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaaaggttacaagaaattagctttgacaagttcacaaagaacaagcc-taatttcta 5723402  T
Q  101 cccttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaa 192  Q
    |||||||| |||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| ||||||||||||| |    
T  5723403 cccttttctcaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-a 5723500  T
Q  193 ccctaaaccctagagttgcc 212  Q
    ||| |||||||| |||||||    
T  5723501 ccccaaaccctaaagttgcc 5723520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 211
Target Start/End: Complemental strand, 45099873 - 45099658
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||||||||||||| |||||||||   |||| |||||||||| |||||||||||||||||| ||||||||||||| |||||| |||||||||||    
T  45099873 actctccaatccactatcaa-tgagttcttc--aaagagatacaaaagagttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttct 45099778  T
Q  100 accc--ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaa 189  Q
    ||||  |||||||||||||||       ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| ||||||||||||    
T  45099777 acccttttttcccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaa 45099679  T
Q  190 gaaccctaaaccctagagttgc 211  Q
    | ||||||||||||| ||||||    
T  45099678 g-accctaaaccctaaagttgc 45099658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 29867987 - 29867869
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||||||||| ||||||||||||| | |||||||| || ||||||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  29867987 ctctccaatccactatcaaa-gagttcttacaaa-gagatacaaatgggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttcta 29867891  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  29867890 cccattttcccaatctcaccaa 29867869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 211
Target Start/End: Original strand, 36205744 - 36205928
Alignment:
Q  35 aaagggatacaaaag-gttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttctacc-cttttcccaatctcac-------caagac 124  Q
    |||| |||||||||| |||||||||||||||| ||||||||||||||| |||| ||||||||||||||||  |||||||||||||||       ||||||    
T  36205744 aaagagatacaaaagagttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttctaccatttttcccaatctcaccaatgaacaagac 36205842  T
Q  125 actcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaaccctaaaccctagagttgc 211  Q
    ||||||||||| || ||   |||||||||| ||||||||  | |||||||||| ||||||||||||| ||||||||||||| ||||||    
T  36205843 actcaatgattttcactcaccaaggtgtttaccatgtttcccaacccaagaga-actctaatcaaag-accctaaaccctaaagttgc 36205928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 211
Target Start/End: Original strand, 4503182 - 4503397
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||||||||||||| |||||||||   |||| |||||||||| |||||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  4503182 actctccaatccactatcaa-tgagttcttc--aaagagatacaaaagagttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttct 4503277  T
Q  100 acc--cttttcccaatctc-------accaagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaa 189  Q
    |||   |||||||||||||       | ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| ||||||||||||    
T  4503278 accattttttcccaatctctccaatgaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaa 4503376  T
Q  190 gaaccctaaaccctagagttgc 211  Q
    ||| ||||||||||| ||||||    
T  4503377 gaa-cctaaaccctaaagttgc 4503397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 13121884 - 13121769
Alignment:
Q  4 tcttcaatccactatcaaatgagttcttacaaaagggatacaaaaggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacc 102  Q
    |||||||||||||||||| ||||||  |||||| | |||||||| ||||||||||||||| ||| | |||| |||||| |||||||||||||||||||||    
T  13121884 tcttcaatccactatcaa-tgagtttctacaaa-gagatacaaa-ggttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctacc 13121788  T
Q  103 cttttcccaatctcaccaa 121  Q
     |||||||| |||||||||    
T  13121787 attttcccagtctcaccaa 13121769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 34139820 - 34139936
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggataca-aaaggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| ||||||||||||||||||||||| |  |||||||||||||||||||  ||||| |||||| |||| ||||||||||||||    
T  34139820 ctctccaatccactatcaa-tgagttcttacaaaagggatacatatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttcta 34139917  T
Q  101 ccc-ttttcccaatctcac 118  Q
    ||| ||||| |||||||||    
T  34139918 cccattttctcaatctcac 34139936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 42362470 - 42362355
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| |||||||||| || |||||||||||||||||  ||||| |||||| ||||||| |||||||||||    
T  42362470 ctctccaatccactatcaa-tgagttcttacaaa-gggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttcta 42362374  T
Q  101 ccc-ttttcccaatctcac 118  Q
    ||| |||||||||||||||    
T  42362373 cccattttcccaatctcac 42362355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 2334468 - 2334586
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||||| ||||| |||||||||||| | ||||||||||| |||||| |||| |||||||    
T  2334468 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagagttactagaaattagcttcaacaagttcacaaagaacaa-cccttatttcta 2334564  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  2334565 cccattttcccaatctcaccaa 2334586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 45727047 - 45726929
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaa-aggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||  ||||| |||||| |||| ||| ||||||||||    
T  45727047 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaataggttacaagaaattagcttcaacaagctcacaaagaac-aactctaatttcta 45726951  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  45726950 cccattttcccaatctcaccaa 45726929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 14633875 - 14633991
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaa-aggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||| | |||||||||||||||||||||||||  |||||||||||||||||||  ||||| |||||| |||| || |||||||||||    
T  14633875 ctctccaatccactatcta-tgagttcttacaaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aatcctaatttcta 14633972  T
Q  101 ccc-ttttcccaatctcac 118  Q
    ||| |||| ||||||||||    
T  14633973 cccattttaccaatctcac 14633991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 38312358 - 38312240
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||| ||||||||| | |||||||| || |||||||||||||| || | ||||||||||| |||||| ||||||||||||    
T  38312358 ctctccaatccactatcaa-tgagatcttacaaa-gagatacaaatgggttacaagaaattagtttcaacaagttcacaaagaacaa-ccctaatttcta 38312262  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  38312261 cccattttcccaatctcaccaa 38312240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 7815323 - 7815441
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||||| ||||||||||||||||| | |||||||||| ||||||||||||||||||  ||||| |   || ||||||||||||||||| |    
T  7815323 ctctccaatccactat-aaatgagttcttacaaa-gagatacaaaagagttacaagaaattagcttcaacaagcttctaaagaacaaaccctaatttcaa 7815420  T
Q  101 cccttttcccaatctcaccaa 121  Q
    || ||||| ||||||||||||    
T  7815421 cctttttctcaatctcaccaa 7815441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 26353302 - 26353184
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| ||||| ||||||||| | ||||||||| |||||||||||||||||| | |||  |||||| ||||||||| |||||||||    
T  26353302 ctctccaatccactatcaa-tgagtacttacaaaaag-atacaaaagtgttacaagaaattagcttcaacaaactcacaaagaacaaaccttaatttcta 26353205  T
Q  101 cccttttcccaatctcaccaa 121  Q
    | |||||  ||||||||||||    
T  26353204 cacttttttcaatctcaccaa 26353184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 209
Target Start/End: Original strand, 36988126 - 36988338
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||| || |||||| |||||  |||||| ||||||||||||    
T  36988126 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagagttacaagaaattagttttgacaagctcacatagaacaa-ccctaatttcta 36988222  T
Q  101 ccc-ttttcccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaaga 191  Q
    ||| |||| |||||| |||       ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| |||||||||||||     
T  36988223 cccttttttccaatcccaccaatgaacaagacactcaatgattttcactcaccaaggtgtttactatgtttcccaacccaagaga-actctaatcaaag- 36988320  T
Q  192 accctaaaccctagagtt 209  Q
    ||||| ||||||| ||||    
T  36988321 accctcaaccctaaagtt 36988338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 723794 - 723893
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| |||||||||| || |||||||||||||||||  ||||| |||||| ||||||| |||||||||||    
T  723794 ctctccaatccactatcaa-tgagttcttacaaa-gggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttcta 723890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 11690619 - 11690504
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||||||||  || |||||||||| |||||||||| || |||||||||||||||||  ||||| |||||| ||||||| |||||||||||    
T  11690619 ctctccaatccactatcaac-gatttcttacaaa-gggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttcta 11690523  T
Q  101 ccc-ttttcccaatctcac 118  Q
    ||| |||||||||||||||    
T  11690522 cccattttcccaatctcac 11690504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 36773680 - 36773562
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||||||||| ||||||||||||| | |||||||| | |||||||||||||||||| | |||| |||||| |||||| ||||||||| |     
T  36773680 ctctccaatccactatcaaa-gagttcttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaa-ccctaatttatt 36773584  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| ||||||||||||||||||    
T  36773583 cccattttcccaatctcaccaa 36773562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 6595056 - 6595175
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||||||||||  ||||||||||||| | ||| ||||||| |||||||||||||||||  |||||||||||| |||| ||||||||||||||    
T  6595056 ctctccaatccactatcaac-gagttcttacaaa-gagattcaaaagggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 6595152  T
Q  101 cc--cttttcccaatctcaccaa 121  Q
    ||   |||||| |||||||||||    
T  6595153 ccattttttcctaatctcaccaa 6595175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 24398176 - 24398055
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||| |||||| |||||||||   |||| ||||||||||| ||||||||||||||||| | |||| |||||| ||||||||| ||| |||||    
T  24398176 ctctccaatccattatcaa-tgagttctttacaaagagatacaaaagggttacaagaaattagcttcaacaagctcacaaagaacaaaccttaacttcta 24398078  T
Q  101 ccctt--ttcccaatctcaccaa 121  Q
    |||||  ||| ||||||||||||    
T  24398077 ccctttcttcacaatctcaccaa 24398055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 11067423 - 11067305
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagc-ttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||||||||||| ||| ||||||||||||||||| | |||||||| || ||||||||||||||| |||||||| |||||| | || ||| ||||||||||    
T  11067423 ctcttcaatccattat-aaatgagttcttacaaa-gagatacaaatgggttacaagaaattagctttgacaagctcacaaagtac-aacactaatttcta 11067327  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| |||| ||||| |||||||    
T  11067326 cccatttttccaatttcaccaa 11067305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 11151641 - 11151759
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||| || ||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||||||  ||||||||||    
T  11151641 ctctccaatccactatctaa-gagttcttacaaa-gtgatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaa-tctaatttcta 11151737  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| |||||||||| |||||||    
T  11151738 cccattttcccaatttcaccaa 11151759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 35446934 - 35447052
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaa-aggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| ||||||||||| |||| ||||||||  |||||||||||||||| ||  ||||| |||||| |||| ||||||||||||||    
T  35446934 ctctccaatccactatcaa-tgagttcttac-aaagagatacaaatgggttacaagaaattagattcaacaagatcacaaagaac-aaccctaatttcta 35447030  T
Q  101 cc-cttttcccaatctcaccaa 121  Q
    ||  |||| |||||||||||||    
T  35447031 ccaattttaccaatctcaccaa 35447052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 36318059 - 36318177
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||| || |||||| ||||||| || | |||| |||||| |||||| ||||||||||||    
T  36318059 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaataaattagtttcaacaagctcacaaagaacaa-ccctaatttcta 36318155  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| |||| |||||||||||||    
T  36318156 cccatttttccaatctcaccaa 36318177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 1631787 - 1631900
Alignment:
Q  8 caatccactatcaaatgagttcttacaaaagggatacaaa-aggttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-t 104  Q
    |||||||||||||| ||||||||||| |||| ||||||||  |||||||||| ||||||||  ||||| |||||| |||| || |||||||||||||| |    
T  1631787 caatccactatcaa-tgagttcttac-aaagagatacaaatgggttacaagatattagcttcaacaagctcacaaagaac-aatcctaatttctacccat 1631883  T
Q  105 tttcccaatctcaccaa 121  Q
    ||| |||||||||||||    
T  1631884 ttttccaatctcaccaa 1631900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 33162506 - 33162618
Alignment:
Q  9 aatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-tt 105  Q
    ||||||||||||| |||||||||||| | | |||||||| || |||||||||||||||||  ||||| |||||| |||| ||||||||||||||||| ||    
T  33162506 aatccactatcaa-tgagttcttacaga-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccatt 33162602  T
Q  106 ttcccaatctcaccaa 121  Q
    |||| ||| |||||||    
T  33162603 ttcctaatttcaccaa 33162618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 33648290 - 33648176
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||| ||||||| |||||||||   ||||  |||||||||| ||||| ||||||||||| | |||| |||||| |||||||||||||||| ||    
T  33648290 ctctccaatccgctatcaa-tgagttctttacaaagaaatacaaaagggttacaggaaattagcttcaacaagctcacaaagaacaaaccctaattttta 33648192  T
Q  101 cccttttcccaatctc 116  Q
    || ||||| |||||||    
T  33648191 ccattttctcaatctc 33648176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 17057419 - 17057537
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| ||||||||||| |||| |||||||| | ||||||| ||||||||||  ||||| |  ||| |||| ||||||||||||||    
T  17057419 ctctccaatccactatcaa-tgagttcttac-aaagagatacaaatgagttacaaaaaattagcttcaacaagcttgcaaagaac-aaccctaatttcta 17057515  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| |||| |||||||||||||    
T  17057516 cccatttttccaatctcaccaa 17057537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 17085402 - 17085520
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| ||||||||||| |||| |||||||| | ||||||| ||||||||||  ||||| |  ||| |||| ||||||||||||||    
T  17085402 ctctccaatccactatcaa-tgagttcttac-aaagagatacaaatgagttacaaaaaattagcttcaacaagcttgcaaagaac-aaccctaatttcta 17085498  T
Q  101 ccc-ttttcccaatctcaccaa 121  Q
    ||| |||| |||||||||||||    
T  17085499 cccatttttccaatctcaccaa 17085520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 121
Target Start/End: Original strand, 42288205 - 42288278
Alignment:
Q  49 ggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctcaccaa 121  Q
    |||||||| |||||||||| | |||| |||||| |||||| || |||||||||||| ||||||||||||||||||    
T  42288205 ggttacaataaattagcttcaacaagctcacaaagaacaa-ccttaatttctacccattttcccaatctcaccaa 42288278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 14202501 - 14202569
Alignment:
Q  50 gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctca 117  Q
    ||||||||||||||||||  ||||| |||||| ||||||| | |||||||||||| ||||||||||||||    
T  14202501 gttacaagaaattagcttaaacaagctcacaaagaacaaa-cataatttctacccattttcccaatctca 14202569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 17490198 - 17490261
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt 67  Q
    |||| |||||||||||||| |||||||||||||| | | |||||||| ||||||||||||||||||    
T  17490198 ctctacaatccactatcaa-tgagttcttacaaa-gagttacaaaagagttacaagaaattagctt 17490261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 28770781 - 28770730
Alignment:
Q  51 ttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctaccc 103  Q
    ||||||||||||||||| | ||| |||||| |||||||| |||||||||||||    
T  28770781 ttacaagaaattagcttaa-aagctcacaaagaacaaactctaatttctaccc 28770730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 2652 - 2868
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttct 99  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2652 tactctccaatccactatcaaatgagttctttacaaaagggatacaagaggttacaagaaattagcttgacaagttcactatgaacaaaccctaatttct 2751  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaa 199  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2752 acccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaa 2849  T
Q  200 ccctagagttgcccctttg 218  Q
    |||||||| | ||||||||    
T  2850 ccctagagcttcccctttg 2868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 6393 - 6177
Alignment:
Q  1 tactcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttct 99  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||  | |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6393 tactctccaatccactatcaaatgagttctttacaaaagggatacaagggcttacaagaaattagcttgacaagttcactatgaacaaaccctaatttct 6294  T
Q  100 acccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaa 199  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6293 acccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaa 6196  T
Q  200 ccctagagttgcccctttg 218  Q
    |||||||||||||||||||    
T  6195 ccctagagttgcccctttg 6177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 2 - 218
Target Start/End: Original strand, 3775 - 3990
Alignment:
Q  2 actcttcaatccactatcaaatgagttctt-acaaaagggatacaaaaggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttcta 100  Q
    ||||| |||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  3775 actctccaatccactatcaaatgagttctttacaaaaggaatacaagaggttacaagaaattagcttgacatgttcactatgaacaaaccctaatttcta 3874  T
Q  101 cccttttcccaatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaac 200  Q
    ||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3875 cccctttcccaatctcaccaagacactcaatgattctctc--tacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaac 3972  T
Q  201 cctagagttgcccctttg 218  Q
    ||||||| | ||||||||    
T  3973 cctagagcttcccctttg 3990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 211
Target Start/End: Complemental strand, 434652 - 434436
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||||||||||||| |||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||||    
T  434652 actctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttct 434556  T
Q  100 accctttt--cccaatctcac-------caagacactcaatgattctctctttacaaggtgtttcccatgtttt-ctacccaagagatactctaatcaaa 189  Q
    ||||||||  |||||||||||       ||||||||||||||||| || ||   |||||| ||| ||||||||| | |||||||||| ||||||||||||    
T  434555 accctttttccccaatctcaccaatgaacaagacactcaatgattttcactcaccaaggtatttaccatgttttccaacccaagaga-actctaatcaaa 434457  T
Q  190 gaaccctaaaccctagagttgc 211  Q
    | ||||||||||||| ||||||    
T  434456 g-accctaaaccctaaagttgc 434436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 2 - 209
Target Start/End: Original strand, 11210 - 11425
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaa-ggttacaagaaattag-cttgacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| ||||||||||||||  ||||||||||||||| ||||||||| ||||||||||||||||  || |||||||||||| |||| |||||||||||||    
T  11210 actctccaatccactatcaac-gagttcttacaaaagagatacaaaagggttacaagaaattagattttacaagttcacaaagaac-aaccctaatttct 11307  T
Q  100 acccttt--tcccaatctcac------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaag 190  Q
    |||||||  ||||||||||||      |||||||||||||||||  | ||   |||||||||| | ||||||  | ||||||||||  ||||||||||||    
T  11308 acccttttctcccaatctcaccaagaacaagacactcaatgatttacactcaccaaggtgtttacaatgtttcccaacccaagagaagctctaatcaaag 11407  T
Q  191 aaccctaaaccctagagtt 209  Q
     ||| ||||||||||||||    
T  11408 -accataaaccctagagtt 11425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 8784 - 8907
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaa-ggttacaagaaattag-cttgacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| ||||||||||||||  ||||||||||||||| ||||||||| ||||||||||||||||  || | |||||||||| |||| |||||||||||||    
T  8784 actctccaatccactatcaac-gagttcttacaaaagagatacaaaagggttacaagaaattagattttataagttcacaaagaac-aaccctaatttct 8881  T
Q  100 acccttt--tcccaatctcaccaaga 123  Q
    |||||||  |||||||||||||||||    
T  8882 acccttttctcccaatctcaccaaga 8907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 211
Target Start/End: Complemental strand, 1034 - 820
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||||||||||||| |||||| ||   |||| ||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||||    
T  1034 actctccaatccactatcaa-tgagttgttc--aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttct 939  T
Q  100 accc--ttttcccaatctcac------caagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaag 190  Q
    ||||  |||||||||||||||      ||||||||||||||||| || ||   |||||||||| | ||||||  | |||||||||| |||||||||||||    
T  938 acccttttttcccaatctcaccaagaacaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag 840  T
Q  191 aaccctaaaccctagagttgc 211  Q
     ||||||||||||| ||||||    
T  839 -accctaaaccctaaagttgc 820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 114720 - 114602
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||||||||||| | |||||||||| |||||||||||||||||| ||||||||||||| |||||| || |||||||||    
T  114720 ctctccaatccactatcaa-tgagttcttacaaa-gagatacaaaagcgttacaagaaattagctttgacaagttcacaaagaacaa-ccttaatttcta 114624  T
Q  101 ccctttt-cccaatctcaccaa 121  Q
    ||||||| ||||||||||||||    
T  114623 ccctttttcccaatctcaccaa 114602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 103
Target Start/End: Complemental strand, 102513 - 102450
Alignment:
Q  40 gatacaaa-aggttacaagaaattagcttgacaagttcacaatgaacaaaccctaatttctaccc 103  Q
    |||||||| |||||||||||||||| ||| | ||| ||||||  |||||||||||||||||||||    
T  102513 gatacaaagaggttacaagaaattatcttaa-aagctcacaaaaaacaaaccctaatttctaccc 102450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 11676 - 11557
Alignment:
Q  2 actcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttct 99  Q
    ||||| |||||||||||||| |||||||||||||| | |||||||| | |||||||||||||||||| ||||||||||||| |||||| |||||||||||    
T  11676 actctccaatccactatcaa-tgagttcttacaaa-gagatacaaatgagttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttct 11580  T
Q  100 accctttt-cccaatctcaccaa 121  Q
    ||| |||| ||||||||||||||    
T  11579 accatttttcccaatctcaccaa 11557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 22286 - 22247
Alignment:
Q  171 aagagatactctaatcaaagaaccctaaaccctagagttgc 211  Q
    |||||| |||||||||||||| |||||||||||||||||||    
T  22286 aagagaaactctaatcaaaga-ccctaaaccctagagttgc 22247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 7440 - 7327
Alignment:
Q  8 caatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttctaccc-t 104  Q
    |||||||||||||| |||||||||||||| | |||||||| || |||||||||||||||||  ||||| |||||| |||| |||| |||||||||||| |    
T  7440 caatccactatcaa-tgagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccttaatttctacccat 7344  T
Q  105 tttcccaatctcaccaa 121  Q
    ||| |||||||||||||    
T  7343 ttttccaatctcaccaa 7327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 18054 - 18171
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaag-gttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| |||||||||||||| |||||| ||||||| | |||||||| | ||||||||||||||||||  ||||| ||||||||||| ||||||||||||||    
T  18054 ctctccaatccactatcaa-tgagtt-ttacaaa-gagatacaaatgagttacaagaaattagcttcaacaagctcacaatgaac-aaccctaatttcta 18149  T
Q  101 cc-cttttcccaatctcaccaa 121  Q
    ||  |||||||| |||||||||    
T  18150 ccaattttcccactctcaccaa 18171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 20465 - 20583
Alignment:
Q  3 ctcttcaatccactatcaaatgagttcttacaaaagggatacaaaagg-ttacaagaaattagctt-gacaagttcacaatgaacaaaccctaatttcta 100  Q
    |||| ||||||| ||||||| ||||||||||||| | |||||||| || |||||||||||||||||  ||||||||||||  |||||| ||||||||||     
T  20465 ctctccaatccaatatcaaa-gagttcttacaaa-gagatacaaatgggttacaagaaattagcttcaacaagttcacaaaaaacaaa-cctaatttctg 20561  T
Q  101 c-ccttttcccaatctcaccaa 121  Q
    | | ||||||||||||||||||    
T  20562 ctcattttcccaatctcaccaa 20583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 80351 - 80447
Alignment:
Q  22 atgagttcttacaaaagggatacaaaagg-ttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctaccc-ttttcccaatctca 117  Q
    |||||||||||||||| | ||||||| || || |||||||||||||| | |||| |||||| |||||| ||||||||||||||| ||||||||||||||    
T  80351 atgagttcttacaaaaag-atacaaatgggttgcaagaaattagcttcaacaagctcacaaagaacaa-ccctaatttctacccattttcccaatctca 80447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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