View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10197_low_23 (Length: 319)
Name: NF10197_low_23
Description: NF10197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10197_low_23 |
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Alignment Details
Target: chr7 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 18 - 311
Target Start/End: Complemental strand, 35755231 - 35754924
Alignment:
| Q |
18 |
aatagaggaagaggaggaggatggacaaggtaaatgtagatcaaatgctttgtgctgcaagcaagcaagcaaagactctataaagctgctgaaaggcctg |
117 |
Q |
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| T |
35755231 |
aatagaggaagaggaggaggatggacaaggtaaatgtagatcaaatgctttgtgctgcaagcaagcaagcaaagactctataaagctgctgaaaggcctg |
35755132 |
T |
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| Q |
118 |
ttttgtgaaagtagttgaggatataagttttgttaacttggttag--------------aattacatcatataagaagaattatgtatttttcatttttg |
203 |
Q |
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| T |
35755131 |
ttttgtgaaagtagttgaggatataagttttgttaacttggttggtgttatatatgtgatattacatcatataagaagaattatgtatttttcagttttg |
35755032 |
T |
|
| Q |
204 |
ttacagtcatcaagatgactttatggttcatggtgtttgtaatttaagaattatacctacagtaatgaaatgagaggtataattcttgtaactttgatgt |
303 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35755031 |
ttacagtcatcaagatgactttatggttcatggtgtttgtaatttaagaattatacctacagtaatgaaatgagaggtataattcttgtaactttgatga |
35754932 |
T |
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| Q |
304 |
cctttgct |
311 |
Q |
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|||||||| |
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| T |
35754931 |
cctttgct |
35754924 |
T |
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