View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10197_low_39 (Length: 248)
Name: NF10197_low_39
Description: NF10197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10197_low_39 |
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Alignment Details
Target: chr8 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 9003851 - 9003620
Alignment:
| Q |
1 |
gcaaaccttccataattattattgtaatttgcttcataattctcttccttgcaaccccttcccatttgttgaagtatttgctccaaagctccttcatcac |
100 |
Q |
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| T |
9003851 |
gcaaaccttccataattattattgtaatttgcttcataattctcttccttgcaaccccttcccatttgttgaagtatttgctccaaagctccttcatcac |
9003752 |
T |
|
| Q |
101 |
aagtatcatacaagtgatggcttcttcttccctctccagaagggctgtctagggttttgagatgattcttcttcttgaatatcctacacaccacccatcc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9003751 |
aagtatcatacaagtgatggcttcttcttccctctccagaagggctgtctagggttttgagatgattcttcttcttgaatatcctacacaccacccatcc |
9003652 |
T |
|
| Q |
201 |
ttcttcttgaccaccatcaccaatcatattcg |
232 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
9003651 |
ttcttcttgaccaccatcaccaatcatattcg |
9003620 |
T |
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