View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10197_low_40 (Length: 243)

Name: NF10197_low_40
Description: NF10197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10197_low_40
NF10197_low_40
[»] scaffold0108 (1 HSPs)
scaffold0108 (1-230)||(50474-50703)
[»] chr7 (32 HSPs)
chr7 (1-230)||(12798194-12798423)
chr7 (1-230)||(19150341-19150570)
chr7 (1-230)||(20749740-20749969)
chr7 (1-230)||(14260936-14261165)
chr7 (1-158)||(15099365-15099522)
chr7 (1-230)||(11385119-11385348)
chr7 (16-218)||(16947174-16947376)
chr7 (1-175)||(14144991-14145165)
chr7 (1-230)||(13024674-13024903)
chr7 (1-233)||(13676781-13677007)
chr7 (4-230)||(12459961-12460187)
chr7 (1-191)||(14283103-14283293)
chr7 (41-230)||(13004835-13005024)
chr7 (5-234)||(13965354-13965583)
chr7 (1-233)||(26115277-26115509)
chr7 (1-233)||(21755742-21755974)
chr7 (34-218)||(15627886-15628070)
chr7 (41-230)||(12712353-12712542)
chr7 (1-233)||(26091485-26091717)
chr7 (34-233)||(18050640-18050839)
chr7 (1-233)||(40924504-40924736)
chr7 (1-233)||(49155631-49155863)
chr7 (61-230)||(14043084-14043253)
chr7 (61-230)||(14353114-14353283)
chr7 (70-170)||(15157832-15157932)
chr7 (1-223)||(12203497-12203719)
chr7 (70-170)||(13689436-13689536)
chr7 (70-170)||(11233988-11234088)
chr7 (70-170)||(18181138-18181238)
chr7 (70-218)||(15145647-15145795)
chr7 (133-173)||(16726210-16726250)
chr7 (133-173)||(17703224-17703264)
[»] chr4 (25 HSPs)
chr4 (1-212)||(14993088-14993299)
chr4 (1-233)||(15267116-15267348)
chr4 (1-230)||(18259781-18260010)
chr4 (1-233)||(16150976-16151208)
chr4 (1-233)||(16155122-16155354)
chr4 (4-223)||(15073702-15073921)
chr4 (1-227)||(20893371-20893597)
chr4 (1-233)||(11203932-11204164)
chr4 (1-223)||(8709017-8709239)
chr4 (1-233)||(7357607-7357839)
chr4 (1-194)||(13879449-13879642)
chr4 (1-233)||(44658566-44658798)
chr4 (1-233)||(3261494-3261726)
chr4 (1-233)||(29450237-29450469)
chr4 (34-233)||(51603492-51603691)
chr4 (34-233)||(53750170-53750369)
chr4 (1-159)||(14697441-14697599)
chr4 (133-230)||(14162942-14163039)
chr4 (70-170)||(14300485-14300585)
chr4 (127-212)||(27903851-27903936)
chr4 (70-176)||(19635542-19635648)
chr4 (61-195)||(8436-8570)
chr4 (133-190)||(18604302-18604359)
chr4 (135-195)||(15514-15574)
chr4 (1-77)||(27903725-27903801)
[»] scaffold0490 (1 HSPs)
scaffold0490 (1-230)||(3234-3463)
[»] chr3 (42 HSPs)
chr3 (1-230)||(16825210-16825439)
chr3 (1-230)||(14290463-14290692)
chr3 (1-233)||(12181313-12181545)
chr3 (1-230)||(17494615-17494848)
chr3 (11-230)||(35983160-35983379)
chr3 (1-230)||(24190273-24190501)
chr3 (1-228)||(17189343-17189570)
chr3 (1-233)||(31692113-31692345)
chr3 (1-233)||(31941872-31942104)
chr3 (1-233)||(12357455-12357687)
chr3 (4-223)||(12857434-12857653)
chr3 (1-233)||(16831456-16831688)
chr3 (1-191)||(16384342-16384532)
chr3 (15-233)||(18131275-18131493)
chr3 (1-230)||(11958112-11958341)
chr3 (10-227)||(16326641-16326859)
chr3 (121-223)||(2245610-2245712)
chr3 (32-230)||(12508496-12508694)
chr3 (1-218)||(15230572-15230789)
chr3 (1-218)||(15236440-15236657)
chr3 (1-233)||(10408937-10409169)
chr3 (1-233)||(28757288-28757520)
chr3 (1-233)||(47126913-47127145)
chr3 (34-173)||(13945026-13945165)
chr3 (34-233)||(8744318-8744517)
chr3 (15-230)||(12843045-12843260)
chr3 (61-170)||(3688959-3689068)
chr3 (70-170)||(10008625-10008725)
chr3 (70-170)||(10909235-10909335)
chr3 (70-170)||(15713061-15713161)
chr3 (127-230)||(13317500-13317603)
chr3 (35-218)||(15262623-15262806)
chr3 (67-173)||(6603757-6603863)
chr3 (127-212)||(10416994-10417079)
chr3 (1-61)||(15008684-15008744)
chr3 (67-170)||(6597077-6597180)
chr3 (67-170)||(13255712-13255815)
chr3 (135-230)||(14578363-14578458)
chr3 (67-170)||(16638795-16638898)
chr3 (67-170)||(43165697-43165800)
chr3 (135-177)||(23079012-23079054)
chr3 (1-93)||(13317637-13317729)
[»] scaffold0434 (1 HSPs)
scaffold0434 (2-230)||(5608-5836)
[»] chr2 (16 HSPs)
chr2 (1-230)||(23274564-23274793)
chr2 (1-230)||(19716260-19716489)
chr2 (1-230)||(19720823-19721052)
chr2 (1-230)||(23097261-23097490)
chr2 (1-223)||(28350846-28351068)
chr2 (1-223)||(21901508-21901730)
chr2 (34-194)||(12577357-12577517)
chr2 (58-233)||(20848614-20848789)
chr2 (70-170)||(24265407-24265507)
chr2 (133-230)||(22742209-22742306)
chr2 (134-219)||(24817094-24817179)
chr2 (70-170)||(10871887-10871987)
chr2 (67-170)||(9338616-9338719)
chr2 (67-170)||(9487250-9487353)
chr2 (1-92)||(24817221-24817312)
chr2 (67-170)||(44382876-44382979)
[»] scaffold0053 (2 HSPs)
scaffold0053 (2-230)||(62478-62706)
scaffold0053 (44-230)||(65028-65214)
[»] chr5 (34 HSPs)
chr5 (10-230)||(21870163-21870383)
chr5 (10-230)||(21874443-21874663)
chr5 (1-233)||(23563050-23563282)
chr5 (4-230)||(23077790-23078016)
chr5 (1-218)||(21983074-21983291)
chr5 (2-206)||(23669887-23670091)
chr5 (34-233)||(17266216-17266415)
chr5 (1-233)||(20345536-20345768)
chr5 (1-233)||(22505933-22506165)
chr5 (20-223)||(43122740-43122943)
chr5 (1-223)||(21560917-21561139)
chr5 (1-233)||(14883873-14884105)
chr5 (32-230)||(23474497-23474695)
chr5 (17-233)||(25851342-25851558)
chr5 (70-170)||(22329835-22329935)
chr5 (137-230)||(21331874-21331967)
chr5 (123-212)||(28891845-28891934)
chr5 (70-170)||(14996687-14996787)
chr5 (70-170)||(19773298-19773398)
chr5 (70-170)||(27682348-27682448)
chr5 (67-170)||(27521741-27521844)
chr5 (70-161)||(27613694-27613785)
chr5 (127-233)||(22465330-22465436)
chr5 (133-218)||(21631296-21631381)
chr5 (127-227)||(20824833-20824933)
chr5 (70-170)||(29473021-29473121)
chr5 (67-170)||(16359837-16359940)
chr5 (135-194)||(25429826-25429885)
chr5 (67-170)||(34569829-34569932)
chr5 (70-164)||(37288450-37288544)
chr5 (127-212)||(20770518-20770603)
chr5 (127-212)||(20779293-20779378)
chr5 (10-167)||(21410415-21410572)
chr5 (135-195)||(26735648-26735708)
[»] scaffold0067 (4 HSPs)
scaffold0067 (1-230)||(29993-30222)
scaffold0067 (1-233)||(48883-49115)
scaffold0067 (1-233)||(57917-58149)
scaffold0067 (1-233)||(64305-64537)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-230)||(4160-4388)
[»] scaffold1433 (1 HSPs)
scaffold1433 (10-230)||(1017-1237)
[»] scaffold0404 (1 HSPs)
scaffold0404 (10-230)||(8122-8342)
[»] scaffold0751 (1 HSPs)
scaffold0751 (1-230)||(5550-5778)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-230)||(115993-116222)
[»] scaffold0046 (2 HSPs)
scaffold0046 (1-230)||(70477-70706)
scaffold0046 (136-230)||(433-527)
[»] chr8 (23 HSPs)
chr8 (1-230)||(21928834-21929063)
chr8 (1-230)||(19985586-19985815)
chr8 (1-233)||(22027423-22027655)
chr8 (4-206)||(22374278-22374480)
chr8 (1-230)||(31413678-31413907)
chr8 (1-223)||(20391492-20391714)
chr8 (1-175)||(22054269-22054443)
chr8 (16-233)||(28984332-28984549)
chr8 (1-233)||(16268367-16268599)
chr8 (1-233)||(29300569-29300801)
chr8 (134-233)||(21970694-21970793)
chr8 (134-232)||(22004225-22004323)
chr8 (1-194)||(6606651-6606844)
chr8 (15-218)||(22523930-22524133)
chr8 (70-173)||(18860049-18860152)
chr8 (61-230)||(21671981-21672150)
chr8 (70-170)||(22126168-22126268)
chr8 (70-218)||(22990520-22990668)
chr8 (61-164)||(19481287-19481390)
chr8 (135-230)||(22421039-22421134)
chr8 (134-232)||(21982098-21982196)
chr8 (134-232)||(21998584-21998682)
chr8 (76-170)||(22117384-22117478)
[»] chr1 (26 HSPs)
chr1 (1-230)||(22015520-22015749)
chr1 (1-230)||(21738811-21739040)
chr1 (1-230)||(21742327-21742556)
chr1 (1-233)||(19857660-19857892)
chr1 (1-233)||(20832673-20832904)
chr1 (1-230)||(24096390-24096619)
chr1 (1-233)||(31536769-31537001)
chr1 (1-233)||(38909598-38909830)
chr1 (1-219)||(21961413-21961631)
chr1 (1-194)||(18273153-18273346)
chr1 (1-233)||(52989127-52989358)
chr1 (34-227)||(16379482-16379675)
chr1 (1-233)||(48426259-48426491)
chr1 (1-194)||(20297769-20297962)
chr1 (4-233)||(20074481-20074710)
chr1 (127-233)||(20853532-20853638)
chr1 (1-233)||(37680435-37680667)
chr1 (61-170)||(16347433-16347542)
chr1 (61-170)||(16354081-16354190)
chr1 (70-170)||(51330330-51330430)
chr1 (136-230)||(20921929-20922023)
chr1 (41-218)||(21044941-21045118)
chr1 (70-170)||(21833723-21833823)
chr1 (61-164)||(41350512-41350615)
chr1 (70-116)||(19109791-19109837)
chr1 (34-230)||(22117102-22117298)
[»] scaffold0102 (1 HSPs)
scaffold0102 (10-230)||(43076-43296)
[»] scaffold0335 (1 HSPs)
scaffold0335 (1-230)||(4010-4239)
[»] scaffold0266 (1 HSPs)
scaffold0266 (1-230)||(17006-17235)
[»] scaffold0156 (1 HSPs)
scaffold0156 (1-233)||(37308-37540)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-230)||(63245-63454)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-233)||(153861-154093)
[»] scaffold0106 (1 HSPs)
scaffold0106 (1-230)||(34706-34935)
[»] scaffold0035 (1 HSPs)
scaffold0035 (1-233)||(6174-6405)
[»] scaffold0523 (2 HSPs)
scaffold0523 (10-230)||(5818-6035)
scaffold0523 (19-195)||(11484-11660)
[»] scaffold0151 (1 HSPs)
scaffold0151 (1-233)||(245-477)
[»] chr6 (28 HSPs)
chr6 (1-233)||(18797894-18798126)
chr6 (10-233)||(19438215-19438438)
chr6 (4-223)||(25771051-25771270)
chr6 (1-233)||(14376761-14376993)
chr6 (1-230)||(21566839-21567068)
chr6 (1-230)||(19456227-19456456)
chr6 (1-230)||(19466372-19466601)
chr6 (1-223)||(19486149-19486371)
chr6 (1-155)||(24515337-24515491)
chr6 (1-223)||(21474804-21475010)
chr6 (4-230)||(10465696-10465922)
chr6 (71-233)||(34642430-34642592)
chr6 (1-230)||(8720553-8720782)
chr6 (123-233)||(15462662-15462772)
chr6 (1-230)||(16813844-16814073)
chr6 (41-230)||(19881640-19881829)
chr6 (1-230)||(18660123-18660352)
chr6 (70-170)||(5836139-5836239)
chr6 (17-233)||(24367620-24367836)
chr6 (127-233)||(20010346-20010452)
chr6 (121-230)||(30677872-30677981)
chr6 (1-230)||(23081627-23081856)
chr6 (1-195)||(25958636-25958830)
chr6 (134-223)||(23084680-23084769)
chr6 (70-170)||(2871713-2871813)
chr6 (135-177)||(22437207-22437249)
chr6 (70-116)||(22829351-22829397)
chr6 (169-233)||(24515269-24515333)
[»] scaffold0261 (2 HSPs)
scaffold0261 (20-230)||(12120-12330)
scaffold0261 (20-230)||(20300-20510)
[»] scaffold2062 (1 HSPs)
scaffold2062 (1-233)||(575-807)
[»] scaffold0020 (2 HSPs)
scaffold0020 (1-233)||(98286-98518)
scaffold0020 (4-223)||(176359-176578)
[»] scaffold1032 (1 HSPs)
scaffold1032 (13-233)||(518-738)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-233)||(586-818)
[»] scaffold0026 (1 HSPs)
scaffold0026 (10-230)||(52029-52249)
[»] scaffold0235 (2 HSPs)
scaffold0235 (1-233)||(8165-8397)
scaffold0235 (1-233)||(18379-18611)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-233)||(319612-319844)
scaffold0004 (1-77)||(326076-326151)
[»] scaffold1056 (1 HSPs)
scaffold1056 (1-230)||(2089-2317)
[»] scaffold1530 (1 HSPs)
scaffold1530 (1-233)||(873-1105)
[»] scaffold0664 (2 HSPs)
scaffold0664 (1-212)||(7407-7618)
scaffold0664 (178-233)||(3-58)
[»] scaffold0104 (1 HSPs)
scaffold0104 (4-230)||(43125-43351)
[»] scaffold0222 (2 HSPs)
scaffold0222 (1-230)||(193-422)
scaffold0222 (1-218)||(21183-21400)
[»] scaffold0074 (1 HSPs)
scaffold0074 (10-233)||(15450-15673)
[»] scaffold0192 (1 HSPs)
scaffold0192 (14-191)||(29909-30086)
[»] scaffold1299 (1 HSPs)
scaffold1299 (18-229)||(1555-1766)
[»] scaffold0476 (1 HSPs)
scaffold0476 (1-230)||(251-480)
[»] scaffold0167 (1 HSPs)
scaffold0167 (1-233)||(5422-5654)
[»] scaffold0010 (3 HSPs)
scaffold0010 (1-233)||(39038-39268)
scaffold0010 (127-212)||(180563-180648)
scaffold0010 (34-230)||(5317-5513)
[»] scaffold0146 (1 HSPs)
scaffold0146 (1-149)||(71-219)
[»] scaffold0034 (4 HSPs)
scaffold0034 (1-233)||(1655-1887)
scaffold0034 (1-233)||(11609-11841)
scaffold0034 (127-218)||(70867-70958)
scaffold0034 (1-77)||(70741-70817)
[»] scaffold1517 (1 HSPs)
scaffold1517 (4-230)||(1193-1419)
[»] scaffold0865 (1 HSPs)
scaffold0865 (12-218)||(990-1196)
[»] scaffold0585 (1 HSPs)
scaffold0585 (21-223)||(574-775)
[»] scaffold0133 (1 HSPs)
scaffold0133 (12-218)||(28003-28209)
[»] scaffold0765 (1 HSPs)
scaffold0765 (15-191)||(6002-6178)
[»] scaffold0405 (1 HSPs)
scaffold0405 (14-230)||(5984-6200)
[»] scaffold0003 (2 HSPs)
scaffold0003 (15-191)||(203764-203940)
scaffold0003 (70-164)||(424746-424840)
[»] scaffold0072 (1 HSPs)
scaffold0072 (31-233)||(54446-54648)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-191)||(263595-263785)
[»] scaffold0188 (1 HSPs)
scaffold0188 (1-230)||(33078-33307)
[»] scaffold0203 (1 HSPs)
scaffold0203 (67-233)||(3754-3920)
[»] scaffold0420 (1 HSPs)
scaffold0420 (1-233)||(8983-9215)
[»] scaffold0348 (2 HSPs)
scaffold0348 (1-233)||(17187-17419)
scaffold0348 (10-164)||(4621-4775)
[»] scaffold0239 (1 HSPs)
scaffold0239 (1-185)||(9538-9722)
[»] scaffold0114 (1 HSPs)
scaffold0114 (10-185)||(40436-40611)
[»] scaffold0317 (1 HSPs)
scaffold0317 (1-233)||(3000-3226)
[»] scaffold0243 (2 HSPs)
scaffold0243 (1-233)||(9477-9707)
scaffold0243 (139-195)||(23686-23742)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-230)||(164107-164336)
[»] scaffold1845 (1 HSPs)
scaffold1845 (1-233)||(1007-1239)
[»] scaffold1426 (1 HSPs)
scaffold1426 (1-233)||(1310-1542)
[»] scaffold0518 (1 HSPs)
scaffold0518 (1-164)||(2200-2363)
[»] scaffold0058 (1 HSPs)
scaffold0058 (15-233)||(22505-22723)
[»] scaffold0706 (1 HSPs)
scaffold0706 (1-233)||(4912-5144)
[»] scaffold0367 (1 HSPs)
scaffold0367 (1-233)||(8724-8956)
[»] scaffold0076 (1 HSPs)
scaffold0076 (17-233)||(53126-53342)
[»] scaffold0001 (2 HSPs)
scaffold0001 (1-221)||(514068-514288)
scaffold0001 (134-218)||(442154-442238)
[»] scaffold0679 (1 HSPs)
scaffold0679 (121-223)||(748-850)
[»] scaffold0586 (1 HSPs)
scaffold0586 (67-233)||(1-167)
[»] scaffold0310 (1 HSPs)
scaffold0310 (1-219)||(11346-11564)
[»] scaffold0098 (1 HSPs)
scaffold0098 (121-223)||(25949-26051)
[»] scaffold0609 (2 HSPs)
scaffold0609 (1-194)||(7926-8119)
scaffold0609 (1-61)||(1308-1368)
[»] scaffold0009 (1 HSPs)
scaffold0009 (17-230)||(252004-252217)
[»] scaffold0100 (1 HSPs)
scaffold0100 (34-194)||(16351-16511)
[»] scaffold0118 (1 HSPs)
scaffold0118 (1-233)||(830-1062)
[»] scaffold0077 (1 HSPs)
scaffold0077 (34-230)||(57320-57516)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-227)||(66817-67043)
[»] scaffold1914 (1 HSPs)
scaffold1914 (34-170)||(996-1132)
[»] scaffold0088 (1 HSPs)
scaffold0088 (58-233)||(30336-30511)
[»] scaffold0180 (1 HSPs)
scaffold0180 (121-223)||(30741-30843)
[»] scaffold0270 (2 HSPs)
scaffold0270 (1-230)||(7242-7471)
scaffold0270 (1-230)||(14372-14601)
[»] scaffold0276 (1 HSPs)
scaffold0276 (1-233)||(23626-23858)
[»] scaffold0190 (1 HSPs)
scaffold0190 (1-185)||(30077-30261)
[»] scaffold0429 (1 HSPs)
scaffold0429 (1-230)||(1128-1357)
[»] scaffold2165 (1 HSPs)
scaffold2165 (1-221)||(518-738)
[»] scaffold1274 (1 HSPs)
scaffold1274 (34-230)||(20-215)
[»] scaffold0507 (1 HSPs)
scaffold0507 (70-230)||(11466-11626)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-233)||(42104-42336)
[»] scaffold0113 (1 HSPs)
scaffold0113 (96-227)||(17703-17834)
[»] scaffold0708 (1 HSPs)
scaffold0708 (1-83)||(4998-5080)
[»] scaffold0529 (1 HSPs)
scaffold0529 (133-230)||(5589-5686)
[»] scaffold0012 (1 HSPs)
scaffold0012 (45-230)||(216126-216311)
[»] scaffold0457 (1 HSPs)
scaffold0457 (58-233)||(13757-13932)
[»] scaffold0165 (1 HSPs)
scaffold0165 (10-109)||(12322-12421)
[»] scaffold0282 (2 HSPs)
scaffold0282 (136-230)||(9828-9922)
scaffold0282 (34-197)||(13213-13376)
[»] scaffold0505 (1 HSPs)
scaffold0505 (133-194)||(2252-2313)
[»] scaffold0029 (2 HSPs)
scaffold0029 (127-212)||(93618-93703)
scaffold0029 (70-170)||(107543-107643)
[»] scaffold0006 (1 HSPs)
scaffold0006 (41-230)||(104635-104824)
[»] scaffold1600 (1 HSPs)
scaffold1600 (34-230)||(468-664)
[»] scaffold0130 (2 HSPs)
scaffold0130 (20-92)||(3736-3808)
scaffold0130 (133-173)||(7542-7582)
[»] scaffold0040 (1 HSPs)
scaffold0040 (134-230)||(18347-18443)
[»] scaffold0044 (1 HSPs)
scaffold0044 (70-164)||(3859-3953)
[»] scaffold0293 (1 HSPs)
scaffold0293 (133-218)||(15911-15996)
[»] scaffold0042 (1 HSPs)
scaffold0042 (133-230)||(26853-26950)
[»] scaffold0018 (3 HSPs)
scaffold0018 (134-219)||(9068-9153)
scaffold0018 (1-92)||(9195-9286)
scaffold0018 (134-230)||(23004-23100)
[»] scaffold0324 (1 HSPs)
scaffold0324 (70-218)||(2427-2575)
[»] scaffold0947 (1 HSPs)
scaffold0947 (178-233)||(1252-1307)
[»] scaffold0403 (1 HSPs)
scaffold0403 (70-184)||(15349-15463)
[»] scaffold0395 (1 HSPs)
scaffold0395 (153-227)||(16232-16306)
[»] scaffold0273 (1 HSPs)
scaffold0273 (133-191)||(541-599)
[»] scaffold0075 (2 HSPs)
scaffold0075 (61-195)||(48159-48293)
scaffold0075 (135-195)||(55212-55272)
[»] scaffold1423 (1 HSPs)
scaffold1423 (135-184)||(130-179)
[»] scaffold0605 (1 HSPs)
scaffold0605 (127-188)||(1775-1836)
[»] scaffold0342 (1 HSPs)
scaffold0342 (34-230)||(13971-14167)


Alignment Details
Target: scaffold0108 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 50474 - 50703
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||  || ||    
T  50474 caaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattccatctatgcttacccttgtcagcaggggcactatacggcttcggaccac 50573  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||||||||||||    
T  50574 tctgctgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcttcttcatagatcctacagctgcttaccaactcagaaaagtttct 50673  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    ||||||||||||||||||||||||||||||    
T  50674 tatcttctgataaccaatagccctcttgat 50703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 178; Significance: 4e-96; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 12798423 - 12798194
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||| |||||||| ||||||||||| |||||||||||||||  |||||    
T  12798423 caaacaatatcagtatgagcatctctcctcttgagcctcctctcatcattcaatctctgcttacccttgtcagcaggagcactatacggcttcggacgac 12798324  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  12798323 tctgctgtcccttgcctctgcgctcactcatcaccttgtaaagagctttcgtatcctcttcataaatcctacagctgcttaccaactcagaaaagtttct 12798224  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    ||||||||||||||||||||||||||||||    
T  12798223 tatcttctgataaccaatagccctcttgat 12798194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 19150341 - 19150570
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||| || |||||||| |||||||||||||||||| ||||||||  |||||    
T  19150341 caaacaatatcagtaggagcatctctcctcttaggcctcctctcatcattcaacctctgcttacccttgtcagcaggggcactaaacggcttcggacgac 19150440  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| ||| | ||||||||||||||||||||||||||||| |||||||||||||| ||||| || || || |||||||| |||||||||||    
T  19150441 tctgctgtcccttacctatgcgctcactcatcaccttgtaatgagctttggtatcctcttcatatatcctgcagctactcaccaattcggaaaagtttct 19150540  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    |||||| ||||||||||||||||| |||||    
T  19150541 tatcttttgataaccaatagcccttttgat 19150570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 20749740 - 20749969
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||| || |||||||| |||||||||||||||||| ||||||||  |||||    
T  20749740 caaacaatatcagtaggagcatctctcctcttaggcctcctctcatcattcaacctctgcttacccttgtcagcaggggcactaaacggcttcggacgac 20749839  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| ||| | ||||||||||||||||||||||||||||| |||||||||||||| ||||| || || || |||||||| |||||||||||    
T  20749840 tctgctgtcccttacctatgcgctcactcatcaccttgtaatgagctttggtatcctcttcatatatcctgcagctactcaccaattcggaaaagtttct 20749939  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    |||||| ||||||||||||||||| |||||    
T  20749940 tatcttttgataaccaatagcccttttgat 20749969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 14261165 - 14260936
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||| ||| ||||||||||||| ||||| ||| |||||| |||||||||||| ||| | |||||| |||||||||||||||||||||||||||  |||||    
T  14261165 caaataatctcagtaggagcatatctccccttaggcctcctctcatcattcagtctctacttacccttgtcagcaggggcactatacggcttcggacgac 14261066  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||  |||||||| ||| | |||||||| ||||||||||||||||||||||||||||||||||| ||||| || || || ||||| ||||| || || ||    
T  14261065 tctactgtcccttacctttgcgctcactgatcaccttgtaatgagctttcgtatcctcttcatatatcctgcagctactcaccaactcagagaaattcct 14260966  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    |||||| ||||| |||||||||||||||||    
T  14260965 tatcttttgatagccaatagccctcttgat 14260936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 15099522 - 15099365
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||| || |||||||||||||||||||||||||||||| || ||||||| || || |||||||| ||||||||||| |||||||||||| ||  |||||    
T  15099522 caaactatgtcagtaggagcatctctcctcttgggcctcctcccatcatttaacctctgcttacccttgtcagcaggagcactatacggcgtcggacgac 15099423  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctc 158  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15099422 tctgctgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtgtcctc 15099365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 11385348 - 11385119
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||| || |||| ||||||||||||||||||||||||  |||||||||||| ||  ||||| || ||||||||||||||||| ||||||||   | |||    
T  11385348 caaactatctcagcaggagcatctctcctcttgggccttctctcatcattcagtcgttgctttcccttgtcagcaggggcactgtacggcttaggatgac 11385249  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| || || ||||||||||||| ||||||||||||||| | ||| || ||||| || || || ||||||||||| ||||||||  ||||    
T  11385248 tctgttgtcccttacccctccgctcactcatcatcttgtaatgagcttttgaatcttcctcatagattctgcagctgcttaccaactcagaaaaagttct 11385149  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
     ||||||||||| ||||| |||||||||||    
T  11385148 gatcttctgatagccaatggccctcttgat 11385119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 218
Target Start/End: Complemental strand, 16947376 - 16947174
Alignment:
Q  16 ggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgc 115  Q
    |||||||||||||||||||||||  |||||||||||| ||| ||||| || ||||||||||||||||| || || ||   ||||||||| |||||||| |    
T  16947376 ggagcatctctcctcttgggccttctctcatcattcattctctgctttcccttgtcagcaggggcactgtatggtttaggacgactctgctgtcccttac 16947277  T
Q  116 ctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacc 215  Q
    | || | |||||||||||||||||||||||||||||||||||||||||| || || || || || ||||||||||| ||  |||| ||||||||||| ||    
T  16947276 cccttctctcactcatcaccttgtaatgagctttcgtatcctcttcatagattctgcagctactcaccaattcagagaaaattctaatcttctgataccc 16947177  T
Q  216 aat 218  Q
    |||    
T  16947176 aat 16947174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 14144991 - 14145165
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||| || |||| ||||||||||||||| |  |||||| |||||||||| | ||| |||||||| ||||||||||||||||| ||||||||   |||||    
T  14144991 caaactatctcagcaggagcatctctcctatatggcctcctctcatcattaagtctctgcttacccttgtcagcaggggcactgtacggcttaggacgac 14145090  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaac 175  Q
    |||| |||||||| ||||| ||||||||||||||||| ||||||||||| ||  |||| ||||| ||||| ||||    
T  14145091 tctgctgtcccttacctcttcgctcactcatcaccttataatgagctttggtgccctcctcatagatcctgcaac 14145165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 13024674 - 13024903
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| ||||||||||||||||||||||||| | ||||||||||  || ||||| || ||||||||||| ||||| || || ||   ||||     
T  13024674 caaacaatttcagcaggagcatctctcctcttgggcctcctatcatcattcatcctctgcttccctttgtcagcaggagcactgtaaggtttaggacgat 13024773  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||  |||||||| || || | ||||||||||||||||||||||||||| || || || ||||| ||||| || ||||||||||| ||||| ||   |||    
T  13024774 tctactgtcccttacccctcctctcactcatcaccttgtaatgagctttggtgtcttcctcatatatcctgcagctgcttaccaactcagagaaaactct 13024873  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
     ||||||||||| |||||||| || |||||    
T  13024874 aatcttctgatacccaatagctcttttgat 13024903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 13676781 - 13677007
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||  ||||||||||||||||||||||||| ||||||||||||| || || || || ||||||||||| ||||||||||| ||   | |||    
T  13676781 caaacaatctcaacaggagcatctctcctcttgggcctcctctcatcattcaacctctgttttcctttgtcagcaggagcactatacggtttaggatgac 13676880  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| ||||  || |||||      || ||||||||||||||||||||| ||||| |||||||| ||||| || || || ||||| ||||| ||  ||||    
T  13676881 tctgctgtcatttacctct------acacatcaccttgtaatgagctttagtatcttcttcatatatcctgcagctactcaccaaatcagagaaaattct 13676974  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
    |||||||||||| ||||| || |||||||||||    
T  13676975 tatcttctgatacccaatggctctcttgatgtc 13677007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 12459961 - 12460187
Alignment:
Q  4 acaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactct 103  Q
    ||||| |||| |||| |||||||||||||||||||| | |||||||||| | | ||||| || ||||||||| | ||| | || |||||   ||||||||    
T  12459961 acaatctcagcaggaacatctctcctcttgggcctcctatcatcattcattttctgctttcccttgtcagcaagagcattgtaaggcttaggacgactct 12460060  T
Q  104 gttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttat 203  Q
    | |||||||| || || | ||||||||||||||||||||||||||| || || || ||||| ||||| || ||||| ||||| ||||| ||   ||| ||    
T  12460061 gctgtcccttacccctcctctcactcatcaccttgtaatgagcttttgtgtcttcctcatatatcctgcagctgctcaccaactcagagaaaactctaat 12460160  T
Q  204 cttctgataaccaatagccctcttgat 230  Q
    ||||||||| || ||||||||||||||    
T  12460161 cttctgataccctatagccctcttgat 12460187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 14283293 - 14283103
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||  |||| |||||||||||||||   ||||||| |||||||||| | ||| |||||||| || ||||||||||||||||||||||||   ||||    
T  14283293 caaacaacctcagcaggagcatctctcctaacgggcctcctctcatcattgagtctctgcttacccttatcagcaggggcactatacggcttcgggcgac 14283194  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcaga 191  Q
    |||| ||||||||    || | ||||||||||||||||||||||||||| || ||||| ||||| ||||| ||||  |||||||| |||||    
T  14283193 tctgctgtcccttattccttctctcactcatcaccttgtaatgagctttagtgtcctcctcatagatcctgcaacgacttaccaaatcaga 14283103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 41 - 230
Target Start/End: Original strand, 13004835 - 13005024
Alignment:
Q  41 tctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgta 140  Q
    |||||||||||| ||  ||||| || ||| |||||||||| || ||||||||   ||||||||||||||||||||| || || |||||||||||||||||    
T  13004835 tctcatcattcagtcgttgctttcccttgccagcaggggcgctgtacggcttaggacgactctgttgtcccttgcccctccgttcactcatcaccttgta 13004934  T
Q  141 atgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    |||||| || | ||| |||||||| || || || || |||| ||| |||||||   | || ||||||||||||||||| |||||||||||    
T  13004935 atgagcctttgaatcttcttcatagattctgcagctacttatcaactcagaaagaatcctgatcttctgataaccaatggccctcttgat 13005024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 234
Target Start/End: Complemental strand, 13965583 - 13965354
Alignment:
Q  5 caatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctg 104  Q
    |||| |||| ||||||||||||||||||||||||| | ||||||  ||   | ||||| || ||||||||||| ||||| || |||||   |||| | ||    
T  13965583 caatctcagcaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattatg 13965484  T
Q  105 ttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatc 204  Q
    ||||||||| || || | ||||||||| | || |||||||||||| || || ||||||||||||| ||| ||| | ||||| |||||||||  ||| |||    
T  13965483 ttgtcccttacccctcctctcactcattatctggtaatgagctttggtgtcttcttcataaatccaacacctgttaaccaactcagaaaagactctgatc 13965384  T
Q  205 ttctgataaccaatagccctcttgatgtcc 234  Q
    | |||||| |||||||| || |||||||||    
T  13965383 tgctgatacccaatagctcttttgatgtcc 13965354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 26115509 - 26115277
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| ||||  |||||||||||||||||||||||| | |||||| |||   | ||||| || ||||||||||| ||||| || |||||   ||||     
T  26115509 caaacaatctcagccggagcatctctcctcttgggcctcctatcatcactcatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgat 26115410  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||||| |||||| || || | ||||||||| | ||||||||||||||| || || |||||||| || ||||| ||| | ||||| ||||| |||  |||    
T  26115409 tctgttatcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcatagattctacacctgttaaccaactcagagaagactct 26115310  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     |||| |||||| ||||| || |||||||||||    
T  26115309 gatctgctgatatccaatggctctcttgatgtc 26115277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 21755742 - 21755974
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| ||||  ||||||||||||||||| |||||| | |||||| |||   | ||||| || ||||||||||| ||||| || |||||   ||||     
T  21755742 caaacaatctcagagggagcatctctcctcttaggcctcatgtcatcactcatattctgctttcctttgtcagcaggagcactgtaaggcttaggacgat 21755841  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    | ||||||||||| || || | ||||||||| | |||||||||||||||  | || ||||||||||| ||||| ||| | ||||| ||||| |||  |||    
T  21755842 tttgttgtcccttacccctcctctcactcattatcttgtaatgagctttgatgtcttcttcataaattctacacctgttaaccaactcagagaagactct 21755941  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     |||| |||||| |||||||| || ||||||||    
T  21755942 gatctgctgatacccaatagctcttttgatgtc 21755974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 218
Target Start/End: Original strand, 15627886 - 15628070
Alignment:
Q  34 ggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatca 133  Q
    |||||||||||||||||||  || || ||||| || |||||||| ||||| || |||||   |||||| ||||| | ||| | | | | |||| |||| |    
T  15627886 ggcctcttctcatcattcaccctttgtttacccttatcagcaggagcactgtaaggctttggacgactttgttgactcttacttttcctctcattcataa 15627985  T
Q  134 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaat 218  Q
    ||||||||||||||||||||||||| ||||| ||||  ||||| ||||||||||||||||  |||   ||||||||||| |||||    
T  15627986 ccttgtaatgagctttcgtatcctcctcatagatccggcaactacttaccaattcagaaattttttggatcttctgatatccaat 15628070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 41 - 230
Target Start/End: Complemental strand, 12712542 - 12712353
Alignment:
Q  41 tctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgta 140  Q
    |||||||||||| ||  ||||| || ||  ||||||| ||||| ||||||||   ||||||||||||||||||||| || || ||||||||||||||| |    
T  12712542 tctcatcattcagtcgttgctttcccttaccagcaggagcactgtacggcttaggacgactctgttgtcccttgcccctccgttcactcatcaccttgga 12712443  T
Q  141 atgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    |||||| || | ||| || ||||| || || || || |||| ||| ||| |||   |||| ||||||||||| ||||| |||||||||||    
T  12712442 atgagcctttgaatcttcctcatagattctgcagctacttatcaactcataaagagttctaatcttctgatagccaatggccctcttgat 12712353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 26091717 - 26091485
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||  ||||||||||||||||||||||||| | ||||||  ||   | ||||| || ||||||||||| ||||| || |||||   ||||     
T  26091717 caaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgat 26091618  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| || || | ||||||||| | ||||||||||||||| || || |||||||| || || || ||  | ||||| ||||| |||  |||    
T  26091617 tctgctgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcatagattctgcacctattaaccaactcagagaagactct 26091518  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     |||| |||||| |||||||| || ||||||||    
T  26091517 gatctgctgatacccaatagctcttttgatgtc 26091485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 34 - 233
Target Start/End: Complemental strand, 18050839 - 18050640
Alignment:
Q  34 ggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatca 133  Q
    |||||| |||||||||| | ||| |||||||| || ||||  || ||||||||||| ||   |||| |||| |||||||| ||||| |||||||||||||    
T  18050839 ggcctcctctcatcattaagtctctgcttacccttatcagtcggagcactatacggtttaggacgattctgatgtcccttacctcttcgctcactcatca 18050740  T
Q  134 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 233  Q
    |||| ||||||||||| || ||||| || || |||||||| |  || ||||| ||||| ||  |||| |||| ||| || || || || |||||||||||    
T  18050739 ccttataatgagctttggtgtcctcctcgtagatcctacagcgactcaccaaatcagagaaaattctaatctgctggtatcctatggctctcttgatgtc 18050640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 40924736 - 40924504
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||  ||||||||||||||||||||||||| | ||||||  ||   | ||||| || ||||||||||| ||||| || |||||   ||||     
T  40924736 caaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgat 40924637  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| || || | ||||||||| | ||| ||||||||||| || || |||||||| || || || ||  | ||||| ||||| |||  | |    
T  40924636 tctgttgtcccttacccctcctctcactcataatcttataatgagctttggtgtcttcttcatagattctgcacctattaaccaactcagagaagacttt 40924537  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     |||| |||||| |||||||| || ||||||||    
T  40924536 gatctgctgatacccaatagctcttttgatgtc 40924504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 49155631 - 49155863
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||  ||||||||||||||||||||||||| | || |||  ||  || ||||| || ||||||||||| ||||| || |||||   ||||     
T  49155631 caaacaatctcaacaggagcatctctcctcttgggcctcctatcctcacccatcctctgctttcctttgtcagcaggagcactgtaaggcttaggacgat 49155730  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| || || | ||||||||| | ||| ||||||||||| || || |||||||| || || || ||  | || || ||||| |||  |||    
T  49155731 tctgttgtcccttacccctcctctcactcataatcttataatgagctttggtgtcttcttcatagattctgcatctattaactaactcagagaagactct 49155830  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     |||| |||||| |||||||| || ||||||||    
T  49155831 gatctgctgatacccaatagctcttttgatgtc 49155863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 230
Target Start/End: Original strand, 14043084 - 14043253
Alignment:
Q  61 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 160  Q
    ||||| || |||||||| |||||||| |||||   || ||||||||| || ||| || | |||||| |||  | |||||||||||| || |||||||| |    
T  14043084 ttacccttatcagcaggagcactataaggctttggacaactctgttgacctttgactttccgctcattcacaatcttgtaatgagccttagtatcctcct 14043183  T
Q  161 cataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    |||||||||| |||||||| ||||  ||||||||  | |  |||||||| |||||||| |||| ||||||    
T  14043184 cataaatcctgcaactgctcaccagatcagaaaaagtacggatcttctggtaaccaattgcccgcttgat 14043253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 230
Target Start/End: Original strand, 14353114 - 14353283
Alignment:
Q  61 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 160  Q
    ||||| || |||||||| |||||||| |||||   || ||||||||| || ||| || | |||||| |||  | |||||||||||| || |||||||| |    
T  14353114 ttacccttatcagcaggagcactataaggctttggacaactctgttgacctttgactttccgctcattcacaatcttgtaatgagccttagtatcctcct 14353213  T
Q  161 cataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    |||||||||| |||||||| ||||  ||||||||  | |  |||||||| |||||||| |||| ||||||    
T  14353214 cataaatcctgcaactgctcaccagatcagaaaaagtacggatcttctggtaaccaattgcccgcttgat 14353283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 170
Target Start/End: Complemental strand, 15157932 - 15157832
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 169  Q
    |||||||||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| ||||||||||||||||| ||||    
T  15157932 tcagcaggggcactgtacggcttaggacgactctgctgtcccttgccctttctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcc 15157833  T
Q  170 t 170  Q
    |    
T  15157832 t 15157832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 12203719 - 12203497
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||||||  ||| |||| ||||||||||||| || ||| |||||||||||||||| || || || ||||||||||| ||||| || |||||   |||||    
T  12203719 caaacaatcacagcaggaacatctctcctcttaggtctcctctcatcattcaatctttgtttccctttgtcagcaggagcactgtagggcttaggacgac 12203620  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
      || || ||  ||   ||   ||||||||| ||||| |||||| |||| |||||||| ||||| || ||||| || || || || |||||||| | | |    
T  12203619 cttgctggcctctgttcctcttctcactcataaccttataatgaactttggtatcctcctcatagattctacagctactcactaactcagaaaattgttt 12203520  T
Q  201 tatcttctgataaccaatagccc 223  Q
     ||||||||||||||||| ||||    
T  12203519 gatcttctgataaccaatggccc 12203497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 170
Target Start/End: Original strand, 13689436 - 13689536
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 169  Q
    |||| ||||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| ||||||||||||||||| ||||    
T  13689436 tcagtaggggcactgtacggcttaggacgactctggtgtcccttgccctttctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcc 13689535  T
Q  170 t 170  Q
    |    
T  13689536 t 13689536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 170
Target Start/End: Complemental strand, 11234088 - 11233988
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 169  Q
    ||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| |||||||||||||| || ||||    
T  11234088 tcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcgtagatcc 11233989  T
Q  170 t 170  Q
    |    
T  11233988 t 11233988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 170
Target Start/End: Original strand, 18181138 - 18181238
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 169  Q
    ||||| |||||||| ||||||||   | |||||||||||||||| ||  | | |||| |||  |||||||| ||||| ||||||||||||||||| ||||    
T  18181138 tcagcgggggcactgtacggcttaggaagactctgttgtcccttacccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcc 18181237  T
Q  170 t 170  Q
    |    
T  18181238 t 18181238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 218
Target Start/End: Complemental strand, 15145795 - 15145647
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 169  Q
    |||||||||| |||||| |||||   |||||||||||| |||||| |  | |||||| |||  | |||||||||||  || ||||| || ||| | ||||    
T  15145795 tcagcagggggactataaggcttaggacgactctgttgacccttggcctttcgctcattcacaatcttgtaatgagtcttggtatcttcctcaaagatcc 15145696  T
Q  170 tacaactgcttaccaattcagaaaagtttcttatcttctgataaccaat 218  Q
    | |||||||| ||||  ||| ||||| |||  |||||||| ||||||||    
T  15145695 tgcaactgctcaccagctcataaaagattcgaatcttctggtaaccaat 15145647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 16726250 - 16726210
Alignment:
Q  133 accttgtaatgagctttcgtatcctcttcataaatcctaca 173  Q
    ||||||||||||||| | |||||||||||||| ||||||||    
T  16726250 accttgtaatgagctctggtatcctcttcatagatcctaca 16726210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 17703264 - 17703224
Alignment:
Q  133 accttgtaatgagctttcgtatcctcttcataaatcctaca 173  Q
    ||||||||||||||| | |||||||||||||| ||||||||    
T  17703264 accttgtaatgagctctggtatcctcttcatagatcctaca 17703224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 172; Significance: 1e-92; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 14993299 - 14993088
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||  |||||    
T  14993299 caaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattcaatctctgcttacccttgtcagcaggggcactatacggcttcagacgac 14993200  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||| |||||||| ||||||||||||||    
T  14993199 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcatatcctcttcataaattctgcaactacttaccaaatcagaaaagtttct 14993100  T
Q  201 tatcttctgata 212  Q
    ||||||||||||    
T  14993099 tatcttctgata 14993088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 15267116 - 15267348
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||||||| || || |||||||| ||||||||||| |||||||||||||||  |||||    
T  15267116 caaacaatattcgtaggagcatctctcctcttgggcctcctctcatcatttaacctctgcttacccttgtcagcaggagcactatacggcttcggacgac 15267215  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||| ||||||||||| || || |||| ||| ||||| ||||||||    
T  15267216 tctgttgtcccttgcctctgcgttcactcatcaccttgtaatgagctttcgtgtcctcctcataaatcctgcagctacttatcaaatcagagaagtttct 15267315  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
    ||| |||||||||||||| || |||||||||||    
T  15267316 tattttctgataaccaatggctctcttgatgtc 15267348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 18259781 - 18260010
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||||| ||||||||||||| |||||||||||||| |||||||||| || || |||||||| ||||||||||| |||||||||||||||  | |||    
T  18259781 caaacaatattagtaggagcatctgtcctcttgggcctcctctcatcatttaacctctgcttacccttgtcagcaggagcactatacggcttcggatgac 18259880  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| ||||||||||| |||||||||||||||||||||||||||| ||| ||||| |||||||| |||||  | || ||||| || ||||| ||||||||    
T  18259881 tctgctgtcccttgcccctacgctcactcatcaccttgtaatgagattttgtatcttcttcatagatcctgtagctacttactaaatcagagaagtttct 18259980  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    ||| ||||  ||||||||||||||||||||    
T  18259981 tattttctagtaaccaatagccctcttgat 18260010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 16150976 - 16151208
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||||||||||  ||||||||||||||||||||||||| |||||||||||||  | ||||| || ||||||| ||| |||||||||||||||  |||||    
T  16150976 caaacaatatcaacaggagcatctctcctcttgggcctcctctcatcattcaacttctgctttcctttgtcagtaggagcactatacggcttcggacgac 16151075  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| ||||| ||||| || || |||||||||||||||||||||||||| || ||||| ||||| || || || || |||||||||||||| |||||  |    
T  16151076 tctgctgtcctttgccccttcgatcactcatcaccttgtaatgagcttttgtgtcctcctcatagattctgcagctacttaccaattcagagaagttcat 16151175  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     ||||||||||| ||||| || |||||||||||    
T  16151176 gatcttctgatacccaatggctctcttgatgtc 16151208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 16155122 - 16155354
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||||||||||  ||||||||||||||||||||||||| |||||||||||||  | ||||| || ||||||| ||| |||||||||||||||  |||||    
T  16155122 caaacaatatcaacaggagcatctctcctcttgggcctcctctcatcattcaacttctgctttcctttgtcagtaggagcactatacggcttcggacgac 16155221  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| ||||| ||||| || || |||||||||||||||||||||||||| || ||||| ||||| || || || || |||||||||||||| |||||  |    
T  16155222 tctgctgtcctttgccccttcgatcactcatcaccttgtaatgagcttttgtgtcctcctcatagattctgcagctacttaccaattcagagaagttcat 16155321  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     ||||||||||| ||||| || |||||||||||    
T  16155322 gatcttctgatacccaatggctctcttgatgtc 16155354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 4 - 223
Target Start/End: Original strand, 15073702 - 15073921
Alignment:
Q  4 acaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactct 103  Q
    ||||| ||||||||||||||||||||| | |||||| |||||||||||| ||| || ||| | ||||||||||| ||||||||||| |||  |||||||     
T  15073702 acaatctcagtaggagcatctctcctcctaggcctcctctcatcattcagtctctgtttaactttgtcagcaggagcactatacggtttcggacgactca 15073801  T
Q  104 gttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttat 203  Q
    | |||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| || || ||||| |||||||| || |||||    
T  15073802 gctgtcccttacctctacgctcactcatcaccttataatgagcttttgtatcctcttcatagatcctacagctactcaccaaatcagaaaaattccttat 15073901  T
Q  204 cttctgataaccaatagccc 223  Q
    ||| || || || |||||||    
T  15073902 cttttggtagccgatagccc 15073921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 20893371 - 20893597
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| |||||||||||||||||| |||||| | ||||||||||   | ||||| || ||||||||||| ||||| || |||||   |||||    
T  20893371 caaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattcatcttctgctttcctttgtcagcaggagcactttaaggcttaggacgac 20893470  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| ||||||||||| || | ||||||||| | ||||||||||||||| || || ||||  |||||||| |||||| ||||||| |||||||||  |||    
T  20893471 tctgctgtcccttgcccctcctctcactcattatcttgtaatgagctttggtgtcttctttgtaaatcctgcaactgtttaccaactcagaaaagactct 20893570  T
Q  201 tatcttctgataaccaatagccctctt 227  Q
     |||| |||||| |||||||| |||||    
T  20893571 gatctgctgatacccaatagctctctt 20893597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 11204164 - 11203932
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| ||||||||||||||||||||| ||| | ||||||||||   | | ||| || ||||||||||| |||||||| |||||   ||||     
T  11204164 caaacaatctcagaaggagcatctctcctcttgggtctcctatcatcattcatcttctactttcctttgtcagcaggagcactataaggcttaggacgat 11204065  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| || || | ||||||||| | ||||||||||||||| || || ||||||||||| ||||| ||| ||||||| ||||| |||  |||    
T  11204064 tctgctgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcataaattctacatctgtttaccaactcagagaagactct 11203965  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     |||| |||||| |||||||| || ||||||||    
T  11203964 gatctgctgatacccaatagctcttttgatgtc 11203932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 8709017 - 8709239
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| |||| ||||| | ||||| || ||| |||||||||||||||| ||||| || ||||||||||| ||||||||  |||||  |||||    
T  8709017 caaacaatctcagcaggaacatctattctcttaggtctcctctcatcattcaatctttgcttccctttgtcagcaggagcactatagagcttcggacgac 8709116  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
      || || || |||   || ||||||||||| |||||||||||||||||  |||||||||| || || ||||||||||| ||||||||| |||| |  ||    
T  8709117 cttgctgacctttgttcctccgctcactcataaccttgtaatgagctttgatatcctcttcgtagattctacaactgctcaccaattcaaaaaattgcct 8709216  T
Q  201 tatcttctgataaccaatagccc 223  Q
     ||||||||||||||||| ||||    
T  8709217 aatcttctgataaccaatggccc 8709239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 7357607 - 7357839
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| ||||||||||||||||||||||||| | ||||||  ||   | ||||| || ||||||||||| ||| | || |||||   ||||     
T  7357607 caaacaatctcagcaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcaatgtaaggcttaggacgat 7357706  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| || || | ||||||||| | |||||||||||| || || || ||||||||||||||||| ||| | ||||| |||||||||  |||    
T  7357707 tctgttgtcccttacccctcctctcactcattatcttgtaatgagccttggtgtcttcttcataaatcctacacctgttaaccaactcagaaaagactct 7357806  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     ||||  ||||| |||||||| || ||||||||    
T  7357807 gatctgttgatacccaatagctcttttgatgtc 7357839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 13879449 - 13879642
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| ||||||| | ||||||| ||||| || ||| |||||||||||||||| ||||  || |||||| |||| ||||| || ||||||  |||||    
T  13879449 caaacaatctcagtagaaacatctcttctcttaggtctcctctcatcattcaatctttgctaccctttgtcatcaggagcactgtagggcttcggacgac 13879548  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaa 194  Q
      || || ||||||   || ||||||||| | ||||| |||||||| ||||||||||| |||||||| |||||||| || ||||||||||||||    
T  13879549 cttgctgacccttgttcctccgctcactcctaaccttataatgagccttcgtatcctcctcataaattctacaactactcaccaattcagaaaa 13879642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 44658798 - 44658566
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||  ||||||||||||||||||||||||| | |||| |  ||   | ||||| || ||||| ||||| ||||| || |||||   ||||     
T  44658798 caaacaatctcaacaggagcatctctcctcttgggcctcctatcatgacccatcttctgctttcctttgtccgcaggagcactgtaaggcttaggacgat 44658699  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| || || | ||||||||| | ||||||||||||||| || || |||||||| || ||||| ||| | ||||| ||||| |||  |||    
T  44658698 tctgttgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcatagattctacacctgttaaccaactcagagaagactct 44658599  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     |||| |||||| ||||| || |||||||||||    
T  44658598 gatctgctgatatccaatggctctcttgatgtc 44658566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 3261726 - 3261494
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||  ||||||||||||||||||||||||| | ||||||  ||   | ||||| || ||||||||||| ||||| || |||||   ||||     
T  3261726 caaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgat 3261627  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| || || | ||||||||| | ||||||||||||||| || || |||||||| || || || ||  | ||||| ||||| |||  |||    
T  3261626 tctgctgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcatagattctgcacctattaaccaactcagagaagactct 3261527  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     |||| |||||| |||||||| || ||||||||    
T  3261526 gatctgctgatacccaatagctcttttgatgtc 3261494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 29450469 - 29450237
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||  |||||||||||||||||| |||||| | ||||||  ||   | ||||| || ||||||||||| ||||| || || ||   ||||     
T  29450469 caaacaatctcaacaggagcatctctcctcttaggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggtttaggacgat 29450370  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| || || | ||||||||| | ||| ||||||||||| || || |||||||||||  | || ||  | ||||| ||||||||| ||||    
T  29450369 tctgttgtcccttacccctcctctcactcataatcttataatgagctttggtgtcttcttcataaattttgcacctattaaccaactcagaaaagattct 29450270  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     ||||  ||||| ||||||||||| ||||||||    
T  29450269 gatctgttgatatccaatagcccttttgatgtc 29450237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 34 - 233
Target Start/End: Complemental strand, 51603691 - 51603492
Alignment:
Q  34 ggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatca 133  Q
    |||||| |||||||||| | ||| |||||||| || ||||  |||||||||||||| ||   |||| |||| |||||||| ||||| |||||||||||||    
T  51603691 ggcctcctctcatcattaagtctctgcttacccttatcagtcggggcactatacggtttaggacgattctgatgtcccttacctcttcgctcactcatca 51603592  T
Q  134 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 233  Q
    | || ||||||||||| || ||||| || || |||||||| |  || ||||| ||||| ||  |||| |||| ||| || || || || |||||||||||    
T  51603591 ctttataatgagctttggtgtcctcctcgtagatcctacagcgactcaccaaatcagagaaaattctaatctgctggtatcctatggctctcttgatgtc 51603492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 34 - 233
Target Start/End: Complemental strand, 53750369 - 53750170
Alignment:
Q  34 ggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatca 133  Q
    |||||| |||||||||| | ||| |||||||| || ||||  |||||||||||||| ||   |||| |||| |||||||| ||||| |||||||||||||    
T  53750369 ggcctcctctcatcattaagtctctgcttacccttatcagtcggggcactatacggtttaggacgattctgatgtcccttacctcttcgctcactcatca 53750270  T
Q  134 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 233  Q
    | || ||||||||||| || ||||| || || |||||||| |  || ||||| ||||| ||  |||| |||| ||| || || || || |||||||||||    
T  53750269 ctttataatgagctttggtgtcctcctcgtagatcctacagcgactcaccaaatcagagaaaattctaatctgctggtatcctatggctctcttgatgtc 53750170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 14697441 - 14697599
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| || ||||||| || |  | |||||| |||||||||||||||| |||||||| || |||||||| ||||| || |||||   |||||    
T  14697441 caaacaatctcagcagtagcatctttctttctaggcctcctctcatcattcaatctttgcttacccttatcagcaggagcactgtaaggctttggacgac 14697540  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 159  Q
    | || || ||||||||| | | |||| |||  || |||||||||||||| |||||||||    
T  14697541 tttgctgacccttgcctttcctctcattcacaactttgtaatgagctttggtatcctct 14697599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 230
Target Start/End: Original strand, 14162942 - 14163039
Alignment:
Q  133 accttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    |||||||| ||||| || ||||||| |||||||||||| |||||||| ||||  || ||||| ||||  |||||||| |||||||| |||||||||||    
T  14162942 accttgtagtgagccttagtatccttttcataaatcctgcaactgctcaccagctctgaaaaatttcggatcttctggtaaccaattgccctcttgat 14163039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 170
Target Start/End: Complemental strand, 14300585 - 14300485
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 169  Q
    |||||||||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| ||||||||||||||||| ||||    
T  14300585 tcagcaggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcc 14300486  T
Q  170 t 170  Q
    |    
T  14300485 t 14300485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 27903851 - 27903936
Alignment:
Q  127 ctcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 212  Q
    ||||||||||| || ||||| || |||||||| ||||||||| |||| || || ||||||||||| || ||||| |||||||||||    
T  27903851 ctcatcaccttatagtgagcctttgtatcctcctcataaatcttacagctactcaccaattcagagaaatttctgatcttctgata 27903936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 176
Target Start/End: Original strand, 19635542 - 19635648
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 169  Q
    ||||| |||||||| ||||||||   || |||||| |||||||||||  | | |||| |||  |||||||| ||||| ||||||||||||||||| ||||    
T  19635542 tcagcgggggcactgtacggcttaggacaactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcc 19635641  T
Q  170 tacaact 176  Q
    | |||||    
T  19635642 tgcaact 19635648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 195
Target Start/End: Original strand, 8436 - 8570
Alignment:
Q  61 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 160  Q
    ||||| || |||||||| ||||| || |||||   ||||||||| || || ||| || | |||||| |||  | |||||||||||  || |||||||| |    
T  8436 ttacccttatcagcaggagcactgtaaggcttaggacgactctgctgacctttggcttttcgctcattcacaatcttgtaatgagtcttggtatcctcct 8535  T
Q  161 cataaatcctacaactgcttaccaattcagaaaag 195  Q
    ||||||| || |||||||| ||||| |||||||||    
T  8536 cataaattctgcaactgctcaccaactcagaaaag 8570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 18604359 - 18604302
Alignment:
Q  133 accttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcag 190  Q
    ||||||||||||||| | |||||||||||||| |||||||| ||| | ||||| ||||    
T  18604359 accttgtaatgagctatggtatcctcttcatagatcctacagctgttcaccaaatcag 18604302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 15574 - 15514
Alignment:
Q  135 cttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaag 195  Q
    |||||||||||  || |||||||| |||||||| || |||||||| ||||| |||||||||    
T  15574 cttgtaatgagtcttggtatcctcctcataaattctgcaactgctcaccaactcagaaaag 15514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 27903725 - 27903801
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcagg 77  Q
    ||||||| ||||  |||||||||||||| | | |||| | |||||||||||||||| || || || |||||||||||    
T  27903725 caaacaacatcaacaggagcatctctccccctaggccgcctctcatcattcaatctttgttttcctttgtcagcagg 27903801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 166; Significance: 6e-89; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 3234 - 3463
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||| ||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||  |||||    
T  3234 caaataatctcagtaggagcatctctcctcttgggcctcctctcatcattcaatctctgcttacccttgtcagcaggggcactatacggcttcggacgac 3333  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||  | |||||||||||||||||||| ||    
T  3334 tctgttgtcccttgcctctgcgctcactcatcaccttataatgagctttcgtatcctcttcatatatcctgcaggtacttaccaattcagaaaagttcct 3433  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    |||||| |||||||||||||||||||||||    
T  3434 tatcttttgataaccaatagccctcttgat 3463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 166; Significance: 6e-89; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 16825439 - 16825210
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||| | |||||| ||||||| |||||||||||||||||||  |||||    
T  16825439 caaacaatatcagtaggagcatctctcatcttgggcctcctctcatctttcaatctctacttacccttgtcaggaggggcactatacggcttcggacgac 16825340  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    || | |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||||||||||||    
T  16825339 tcagctgtcccttgcctctgcgctcactcatcaccttgtaatgagctttcgtatcttcttcatagatcctacagctgcttaccaactcagaaaagtttct 16825240  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    ||||||||||||||||||||||||||||||    
T  16825239 tatcttctgataaccaatagccctcttgat 16825210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 14290692 - 14290463
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||| ||| ||||||||||||||||||||||| |||||| ||||||||||||  || || ||||| ||||||||||| ||||||||||| |||  |||||    
T  14290692 caaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcaggagcactatacggtttcggacgac 14290593  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| ||||| |||||||||||||| || ||||||||||| |||||||||||||| || |||||||||||| ||||||||||||| |||||    
T  14290592 tctgctgtcccttacctctgcgctcactcatcactttataatgagctttggtatcctcttcatagattctacaactgctttccaattcagaaaaatttct 14290493  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    |||||| |||||||||||||||||||||||    
T  14290492 tatcttttgataaccaatagccctcttgat 14290463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 12181313 - 12181545
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||| ||| ||||||||||||||||||||||||| |||| |||||||||| || || | |||||| ||||||||||| |||||||||||||||  |||||    
T  12181313 caaaaaatgtcagtaggagcatctctcctcttggtcctcctctcatcatttaacctctacttacccttgtcagcaggagcactatacggcttcagacgac 12181412  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||| |||||||||||||| | ||||||||||||||| ||||| ||    
T  12181413 tctgttgtcccttgcctcttcgttcactcatcaccttgtaatgagctttcgtgtcctcctcataaatcctacagccgcttaccaattcagagaagttcct 12181512  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
    ||| |||||||| ||||| |  |||||||||||    
T  12181513 tattttctgatagccaatggttctcttgatgtc 12181545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 17494615 - 17494848
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgtt----gtcagcaggggcactatacggcttctaa 96  Q
    |||||||| |||||| ||||||||||||||||||||||| |||||||||| || || |||||||| ||    | ||||||| |||||||| |||||| ||    
T  17494615 caaacaatctcagtatgagcatctctcctcttgggcctcctctcatcatttaacctctgcttacccttctcagccagcaggagcactatatggcttcgaa 17494714  T
Q  97 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 196  Q
    ||||| |||||||||||| |||| ||||||||||||||||||||||||||||| |||||||| ||||| || ||||| ||||||||||| ||||||||||    
T  17494715 cgactttgttgtcccttggctctgcgctcactcatcaccttgtaatgagctttggtatcctcctcatagattctacagctgcttaccaactcagaaaagt 17494814  T
Q  197 ttcttatcttctgataaccaatagccctcttgat 230  Q
    |||||||||||||||||||||| || ||||||||    
T  17494815 ttcttatcttctgataaccaatggctctcttgat 17494848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 11 - 230
Target Start/End: Original strand, 35983160 - 35983379
Alignment:
Q  11 cagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcc 110  Q
    |||||||||||||||||||||| |||||| ||||||||||||  || || ||||| ||||||||||| ||||||||||| |||  || |||||| |||||    
T  35983160 cagtaggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcaggagcactatacggtttcggacaactctgctgtcc 35983259  T
Q  111 cttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctga 210  Q
    ||| ||||| | |||||||||||| || ||||||||||| |||||||||||||| || |||||||||||||||||||||||||| ||||||||||| |||    
T  35983260 cttacctctgcactcactcatcactttataatgagctttggtatcctcttcatagattctacaactgcttaccaattcagaaaaatttcttatcttatga 35983359  T
Q  211 taaccaatagccctcttgat 230  Q
    ||||||||||||||||||||    
T  35983360 taaccaatagccctcttgat 35983379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 24190273 - 24190501
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||||||||||  |||||||||||||||||||  |||| |||||||||||||||| ||||| || ||||||||||| ||||| |||||||||  |||||    
T  24190273 caaacaatatcaacaggagcatctctcctcttgtacctcctctcatcattcaatctctgctttcccttgtcagcaggagcactgtacggcttcggacgac 24190372  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| || || |||||||| || ||| ||||||||||||||||||||||||| ||||||||||| || ||||| || |||||||| ||||| ||||||||    
T  24190373 tctgctggcc-ttgcctctgcggtcagtcatcaccttgtaatgagctttcgtgtcctcttcatagattctacagctacttaccaaatcagagaagtttct 24190471  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
     |||||||| || |||||||||||||||||    
T  24190472 gatcttctggtatccaatagccctcttgat 24190501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 17189343 - 17189570
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||||||||||  |||||||||||||||||||| |||| |||||||||| ||||| ||||| || |||| |||||| ||||| |||||||||  |||||    
T  17189343 caaacaatatcaacaggagcatctctcctcttggacctcctctcatcattaaatctctgctttcccttgttagcaggagcactgtacggcttcggacgac 17189442  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| || ||||||||||| || |||||||||||||||||||||||||| || ||||||||||| || ||||| || |||||||| ||| | ||||||||    
T  17189443 tctgctggcccttgcctctgcggtcactcatcaccttgtaatgagcttttgtgtcctcttcatagattctacagctacttaccaactcaaagaagtttct 17189542  T
Q  201 tatcttctgataaccaatagccctcttg 228  Q
     |||||||| || |||||||||||||||    
T  17189543 gatcttctggtatccaatagccctcttg 17189570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 31692345 - 31692113
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||| || |||| || ||||| |||||| ||||||||| |||||||||||||  | ||||| || ||||||||||| |||||||||||||||  |||||    
T  31692345 caaacgatctcagcagaagcatttctcctattgggcctcctctcatcattcaacttctgcttccctttgtcagcaggagcactatacggcttcggacgac 31692246  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| ||||| ||||  || || |||||||||||||| |||||||||||||| ||||| ||||| || || || || |||||||||||||| ||||||||    
T  31692245 tctgctgtcctttgctccttcgatcactcatcaccttataatgagctttcgtgtcctcctcatagattctgcagctacttaccaattcagagaagtttct 31692146  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     ||||||||||| ||||| || |||||||||||    
T  31692145 gatcttctgatacccaatggctctcttgatgtc 31692113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 31941872 - 31942104
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||| || |||| |||||||| |||||| ||||||||| |||||||||||||  | ||||| || ||||||||||| |||||||||||||||  |||||    
T  31941872 caaacgatctcagcaggagcatttctcctattgggcctcctctcatcattcaacttctgcttccctttgtcagcaggagcactatacggcttcggacgac 31941971  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| | ||| ||||  || || |||||||||||||| |||||||||||||| ||||| ||||| || || || || |||||||||||||| ||||||||    
T  31941972 tctgctatcctttgctccttcgatcactcatcaccttataatgagctttcgtgtcctcctcatagattctgcagctacttaccaattcagagaagtttct 31942071  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     ||||||||||| ||||| || |||||||||||    
T  31942072 gatcttctgatacccaatggctctcttgatgtc 31942104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 12357687 - 12357455
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| ||||| ||||||||||||||||||| ||||||||||||  || | ||| || ||||||||||| |||||||| || ||   |||||    
T  12357687 caaacaatctcagcaggagtatctctcctcttgggcctcctctcatcattcagcctctactttcccttgtcagcaggagcactatatggtttaggacgac 12357588  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| || || || ||||| ||||| ||  ||||    
T  12357587 tctgatgtcccttacctctgcgctcactcatcaccttgtaatgagctttagtgtcttcttcatatatcctgcagctactcaccaaatcagagaaaattct 12357488  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
    |||||||||||| | ||| || |||||||||||    
T  12357487 tatcttctgatacctaatggctctcttgatgtc 12357455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 4 - 223
Target Start/End: Complemental strand, 12857653 - 12857434
Alignment:
Q  4 acaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactct 103  Q
    ||||| |||||||||||||||||||| || |||||| |||||||||||| ||  || ||||| ||||||||||| ||||||||||| ||   ||||||||    
T  12857653 acaatctcagtaggagcatctctccttttaggcctcctctcatcattcagtccttgtttacctttgtcagcaggagcactatacggttttggacgactct 12857554  T
Q  104 gttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttat 203  Q
      |||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||| || ||||| || || ||||| ||| ||||  |||||||    
T  12857553 actgtcccttgcctctacgctcactcatcaccttataatgagcttttgtatcctcctcatagattctacagctactcaccaaatcaaaaaaaattcttat 12857454  T
Q  204 cttctgataaccaatagccc 223  Q
    ||| || || ||||| ||||    
T  12857453 cttttggtagccaatggccc 12857434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 16831688 - 16831456
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||| || |||| ||||||||||||||| || |||||| |||||||||| | ||| |||||||| || |||||||||||||||||||||||   | |||    
T  16831688 caaactatctcagcaggagcatctctcctattcggcctcctctcatcattaagtctctgcttacccttatcagcaggggcactatacggcttaggatgac 16831589  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| ||||| ||||||||||||||||| ||||||||||| || ||||| ||||| ||||| ||||  |||||||| ||||| ||  ||||    
T  16831588 tctgctgtcccttacctcttcgctcactcatcaccttataatgagctttggtgtcctcctcatagatcctgcaacgacttaccaaatcagagaaaattct 16831489  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
    |||||  || || || || || |||||||||||    
T  16831488 tatctgttggtaccctatggctctcttgatgtc 16831456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 16384532 - 16384342
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||| || |||| ||||||||||||||| || |||||| |||||||||| | ||| |||||||| ||||||||||||||||| || |||||   |||||    
T  16384532 caaactatctcagcaggagcatctctcctattcggcctcctctcatcattaagtctctgcttacccttgtcagcaggggcactgtatggcttaggacgac 16384433  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcaga 191  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||||||  | ||||| ||||| |||||||| |  |||||||| |||||    
T  16384432 tctgttgtcccttacctcttcgctcactcatcaccttataatgagctttgctgtcctcctcatagatcctacagcaacttaccaaatcaga 16384342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 233
Target Start/End: Complemental strand, 18131493 - 18131275
Alignment:
Q  15 aggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttg 114  Q
    ||||||||||||||||||||||||| |||||| ||||| ||| || || || ||||||||||| |||||||| || ||   ||||||||| ||||| ||     
T  18131493 aggagcatctctcctcttgggcctcctctcattattcagtctctgttttcctttgtcagcaggagcactatatggtttaggacgactctgctgtccttta 18131394  T
Q  115 cctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataac 214  Q
    ||||| || ||||||||||| |||||||||||||| || || |||||||| |||||||| || || ||||  ||||| ||  |||||||||||||||| |    
T  18131393 cctctccgttcactcatcactttgtaatgagctttagtgtcttcttcatatatcctacagctactcaccatatcagagaaaattcttatcttctgatacc 18131294  T
Q  215 caatagccctcttgatgtc 233  Q
    |||| || |||||||||||    
T  18131293 caatggctctcttgatgtc 18131275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 11958341 - 11958112
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| ||||||||||||||||||  ||||| | |||||||||| ||| || || || ||||||||||| ||||| || || ||   ||||     
T  11958341 caaacaatttcagcaggagcatctctcctcttaagcctcctatcatcattcattctctgtttccctttgtcagcaggagcactgtaaggtttaggacgat 11958242  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| ||||| | |||||||||||||||||||||| |||| || || || ||||||||||  || ||||||||||| ||||| ||   |||    
T  11958241 tctgctgtcccttacctctcctctcactcatcaccttgtaatgaacttttgtgtcttcctcataaatcccgcagctgcttaccaactcagagaaaactct 11958142  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
     ||||||||||| |||||||| || |||||    
T  11958141 aatcttctgatacccaatagctcttttgat 11958112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 10 - 227
Target Start/End: Complemental strand, 16326859 - 16326641
Alignment:
Q  10 tcagtaggagca-tctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgt 108  Q
    |||| ||||||| |||||||||||||| ||| | ||||||||||   | ||||| || ||||||||||| ||||| |  |||||   ||||||||| |||    
T  16326859 tcagcaggagcagtctctcctcttgggtctcctatcatcattcaccttttgctttcctttgtcagcaggagcactgtcaggcttaggacgactctgctgt 16326760  T
Q  109 cccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttct 208  Q
    |||||||| || | ||||||||| | ||||||||||||||| || || |||||||||||||| |||||| ||||||| ||||| |||  ||| |||| ||    
T  16326759 cccttgcccctcctctcactcattatcttgtaatgagctttggtgtcttcttcataaatcctgcaactgtttaccaactcagagaagactctgatctgct 16326660  T
Q  209 gataaccaatagccctctt 227  Q
    |||| |||||||| |||||    
T  16326659 gatacccaatagctctctt 16326641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 121 - 223
Target Start/End: Complemental strand, 2245712 - 2245610
Alignment:
Q  121 cgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatag 220  Q
    ||||||||||||||||| ||||||||||| ||||| || |||||||||||| | || || ||||| |||||||||||||| ||||||||||||||||| |    
T  2245712 cgctcactcatcaccttataatgagctttggtatcatcctcataaatcctaaagctactcaccaactcagaaaagtttctaatcttctgataaccaatgg 2245613  T
Q  221 ccc 223  Q
    |||    
T  2245612 ccc 2245610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 230
Target Start/End: Complemental strand, 12508694 - 12508496
Alignment:
Q  32 tgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcat 131  Q
    |||||||||||||||||||||  || |||| ||| || ||||| || ||||| || |||||   |||||| || || | ||| ||| | | |||||||||    
T  12508694 tgggcctcttctcatcattcaccctctgctcacccttatcagccggagcactgtaaggctttggacgactttgctgactcttacctttcctctcactcat 12508595  T
Q  132 caccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
      ||||||||||||||||||||||||  ||||| || || |||||||| |||| |||||||||||| |  ||||||||||| ||||| |||||||||||    
T  12508594 agccttgtaatgagctttcgtatccttctcatagattctgcaactgctcaccagttcagaaaagttacagatcttctgatatccaatggccctcttgat 12508496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 15230572 - 15230789
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| |||| ||||| | ||||| |||||| |||||||||| ||||| ||||| || ||||||||||| |||||||| |||||   |||||    
T  15230572 caaacaatctcagcaggaacatcttttctcttaggcctcctctcatcatttaatctttgcttccctttgtcagcaggagcactatagggcttaggacgac 15230671  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
      ||||| || |||   ||   ||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || ||  |||| |||||||| | |||    
T  15230672 cttgttggcctttgttcctcttctcactcataaccttataatgagctttggtatcctcctcatagattctacagctactccccaactcagaaaattgtct 15230771  T
Q  201 tatcttctgataaccaat 218  Q
     |||||||||||||||||    
T  15230772 gatcttctgataaccaat 15230789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 15236440 - 15236657
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| |||| ||||| | ||||| |||||| |||||||||| ||||| ||||| || ||||||||||| |||||||| |||||   |||||    
T  15236440 caaacaatctcagcaggaacatcttttctcttaggcctcctctcatcatttaatctttgcttccctttgtcagcaggagcactatagggcttaggacgac 15236539  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
      ||||| || |||   ||   ||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || ||  |||| |||||||| | |||    
T  15236540 cttgttggcctttgttcctcttctcactcataaccttataatgagctttggtatcctcctcatagattctacagctactccccaactcagaaaattgtct 15236639  T
Q  201 tatcttctgataaccaat 218  Q
     |||||||||||||||||    
T  15236640 gatcttctgataaccaat 15236657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 10408937 - 10409169
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| ||||  |||||||||||||||||||||||| | ||||||  ||   | || ||||| ||||||||||| ||||| || |||||   |||||    
T  10408937 caaacaatctcagctggagcatctctcctcttgggcctcctatcatcacccatcttctgtttacccttgtcagcaggagcactgtaaggcttaggacgac 10409036  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| || || | ||||||||| | ||||||||||||||| || || |||||||| || || || ||  | ||||| ||||||||   |||    
T  10409037 tctggtgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcatagattctgcacctattaaccaactcagaaaaaactct 10409136  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     |||| |||||| |||||||| || ||||||||    
T  10409137 gatctgctgatatccaatagctcttttgatgtc 10409169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 28757288 - 28757520
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||  ||||||||||||||||||||||||| | ||||||  ||   | ||||| || ||||||||||| ||||| || |||||   ||||     
T  28757288 caaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgat 28757387  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| || || | ||||||||| | ||||||||||||||| || || |||||||| || || || ||  | ||||| ||||| |||  |||    
T  28757388 tctgttgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcatagattctgcacctattaaccaactcagagaagactct 28757487  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     |||| |||||| |||||||| || ||||||||    
T  28757488 gatctgctgatacccaatagctcttttgatgtc 28757520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 47126913 - 47127145
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||  ||||||||||||||||||||||||| | ||||||  ||  || ||||| || ||||||||||| ||||| || |||||   ||||     
T  47126913 caaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcctctgctttcctttgtcagcaggagcactgtaaggcttaggacgat 47127012  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| || || | ||||||||| | ||| ||||||||||| || || |||||||| || || || ||  | ||||| ||||| |||  |||    
T  47127013 tctgttgtcccttacccctcctctcactcataatcttataatgagctttggtgtcttcttcatagattctgcacctattaaccaactcagagaagactct 47127112  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     |||| |||||| |||||||| || ||||||||    
T  47127113 gatctgctgatacccaatagctcttttgatgtc 47127145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 173
Target Start/End: Original strand, 13945026 - 13945165
Alignment:
Q  34 ggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatca 133  Q
    |||||| |||||||||| | ||| |||||||| || ||||  |||||||||||||| ||   |||| |||| |||||||| ||||| |||||||||||||    
T  13945026 ggcctcctctcatcattaagtctctgcttacccttatcagtcggggcactatacggtttaggacgattctgatgtcccttacctcttcgctcactcatca 13945125  T
Q  134 ccttgtaatgagctttcgtatcctcttcataaatcctaca 173  Q
    |||| ||||||||||| || ||||| || || ||||||||    
T  13945126 ccttataatgagctttggtgtcctcctcgtagatcctaca 13945165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 34 - 233
Target Start/End: Complemental strand, 8744517 - 8744318
Alignment:
Q  34 ggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatca 133  Q
    |||||| |||||||||| | ||| |||||||| || ||||  |||||||||||||| ||   |||| |||| |||||||| ||||| |||||||||||||    
T  8744517 ggcctcctctcatcattaagtctctgcttacccttatcagtcggggcactatacggtttaggacgattctgatgtcccttacctcttcgctcactcatca 8744418  T
Q  134 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 233  Q
    | || ||||||||||| || ||||| || || |||||||| |  || ||||| ||||| ||  |||| |||| ||| || || || || |||||||||||    
T  8744417 ctttataatgagctttggtgtcctcctcgtagatcctacagcgactcaccaaatcagagaaaattctaatctgctggtatcctatggctctcttgatgtc 8744318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 230
Target Start/End: Complemental strand, 12843260 - 12843045
Alignment:
Q  15 aggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttg 114  Q
    |||||||||| || || | |||| | |||||||| ||| ||| || || || || |||||||| ||||||||  ||||   ||||||||| || || |||    
T  12843260 aggagcatctttcttcctaggccgcctctcatcaatcattctctgtttgcccttatcagcaggagcactataaagctttggacgactctgctgacctttg 12843161  T
Q  115 cctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataac 214  Q
     || | |||||| |||  | |||||||||||| || |||||||| ||||||||||| |||||||| ||||  || |||||||| |  |||||||| ||||    
T  12843160 acttttcgctcattcacaatcttgtaatgagccttagtatcctcctcataaatcctgcaactgctcaccagctcggaaaagttacgaatcttctggtaac 12843061  T
Q  215 caatagccctcttgat 230  Q
    |||| |||| ||||||    
T  12843060 caattgcccgcttgat 12843045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 170
Target Start/End: Original strand, 3688959 - 3689068
Alignment:
Q  61 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 160  Q
    ||||| |||||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| |||||||||||||    
T  3688959 ttacccttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctctt 3689058  T
Q  161 cataaatcct 170  Q
    | || |||||    
T  3689059 cgtagatcct 3689068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 170
Target Start/End: Original strand, 10008625 - 10008725
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 169  Q
    |||||||||||||| ||||||||   ||||||||| |||||||| ||  | | |||| |||  |||||||| ||||| ||||||||||||||||| ||||    
T  10008625 tcagcaggggcactgtacggcttaggacgactctgctgtcccttacccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcc 10008724  T
Q  170 t 170  Q
    |    
T  10008725 t 10008725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 170
Target Start/End: Original strand, 10909235 - 10909335
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 169  Q
    |||||||||||||| ||||||||   ||||||||| |||||||| ||  | | |||| |||  |||||||| ||||| ||||||||||||||||| ||||    
T  10909235 tcagcaggggcactgtacggcttaggacgactctgctgtcccttacccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcc 10909334  T
Q  170 t 170  Q
    |    
T  10909335 t 10909335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 170
Target Start/End: Complemental strand, 15713161 - 15713061
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 169  Q
    ||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| ||||||||||||||||| ||||    
T  15713161 tcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcc 15713062  T
Q  170 t 170  Q
    |    
T  15713061 t 15713061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 230
Target Start/End: Complemental strand, 13317603 - 13317500
Alignment:
Q  127 ctcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctct 226  Q
    |||||| |||| || ||||| || |||||||| ||||| |||||||||||||| ||||| || || || ||| | ||||||||||| ||||| || ||||    
T  13317603 ctcatcgccttatagtgagcctttgtatcctcctcatatatcctacaactgctcaccaactccgagaaatttatgatcttctgatatccaatggctctct 13317504  T
Q  227 tgat 230  Q
    ||||    
T  13317503 tgat 13317500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 218
Target Start/End: Original strand, 15262623 - 15262806
Alignment:
Q  35 gcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcac 134  Q
    ||||| |||||||||||| ||| || ||||| || |||||||| ||  | || |||||   |||||| |||||  | |||||| | |||||| |||  ||    
T  15262623 gcctcctctcatcattcattctttgtttacccttatcagcaggagcgttgtaaggctttggacgactttgttgatctttgcctttccgctcattcacaac 15262722  T
Q  135 cttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaat 218  Q
    |||||||||||| || |||||||| ||||| || || |||||||| ||||  ||||||||||| |  |||||||  ||||||||    
T  15262723 cttgtaatgagccttagtatcctcctcatagattctgcaactgctcaccagctcagaaaagttacggatcttctagtaaccaat 15262806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 173
Target Start/End: Original strand, 6603757 - 6603863
Alignment:
Q  67 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 166  Q
    |||||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||||| ||||| |    
T  6603757 ttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttggtatcctcctcataga 6603856  T
Q  167 tcctaca 173  Q
    |||||||    
T  6603857 tcctaca 6603863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 10417079 - 10416994
Alignment:
Q  127 ctcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 212  Q
    |||||||||||||||||||| ||||||||||| |||||||| || || || || |||| ||| || ||  |||| |||||||||||    
T  10417079 ctcatcaccttgtaatgagccttcgtatcctcctcataaattctgcagctactcaccagttctgagaaaattctgatcttctgata 10416994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 15008744 - 15008684
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgct 61  Q
    |||||||| |||| |||| ||||||||||||| || ||| |||||||||||||||| ||||    
T  15008744 caaacaatctcagcaggaacatctctcctcttaggtctcctctcatcattcaatctttgct 15008684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 170
Target Start/End: Original strand, 6597077 - 6597180
Alignment:
Q  67 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 166  Q
    |||||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||||| ||||| |    
T  6597077 ttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttggtatcctcctcataga 6597176  T
Q  167 tcct 170  Q
    ||||    
T  6597177 tcct 6597180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 170
Target Start/End: Original strand, 13255712 - 13255815
Alignment:
Q  67 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 166  Q
    |||||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| ||||| |||||||| || |    
T  13255712 ttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtgtcctcttcgtaga 13255811  T
Q  167 tcct 170  Q
    ||||    
T  13255812 tcct 13255815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 230
Target Start/End: Complemental strand, 14578458 - 14578363
Alignment:
Q  135 cttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    |||||||||||| || ||||| || ||||||||||| |||||||| ||||  | ||||||||  |  |||||||| |||||||| || ||||||||    
T  14578458 cttgtaatgagccttggtatcatcctcataaatcctgcaactgctcaccagcttagaaaagtcacggatcttctggtaaccaattgctctcttgat 14578363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 170
Target Start/End: Original strand, 16638795 - 16638898
Alignment:
Q  67 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 166  Q
    |||||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||||| ||||| |    
T  16638795 ttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttggtatcctcctcataga 16638894  T
Q  167 tcct 170  Q
    ||||    
T  16638895 tcct 16638898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 170
Target Start/End: Original strand, 43165697 - 43165800
Alignment:
Q  67 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 166  Q
    |||||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||||| ||||| |    
T  43165697 ttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttggtatcctcctcataga 43165796  T
Q  167 tcct 170  Q
    ||||    
T  43165797 tcct 43165800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 23079054 - 23079012
Alignment:
Q  135 cttgtaatgagctttcgtatcctcttcataaatcctacaactg 177  Q
    |||||||||||| || |||||||||||||||||||| ||||||    
T  23079054 cttgtaatgagccttggtatcctcttcataaatcctgcaactg 23079012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 13317729 - 13317637
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttc 93  Q
    ||||||| ||||  |||||||||||||| | | |||||| |||||||||| ||| | || || || ||||||||||| ||||| || ||||||    
T  13317729 caaacaacatcaacaggagcatctctccccctaggcctcctctcatcatttaatatttgttttcctttgtcagcaggagcactgtagggcttc 13317637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 5836 - 5608
Alignment:
Q  2 aaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgact 101  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||| ||||||||||| |||||||||||||||  | ||||    
T  5836 aaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattcagtctctgcttacccttgtcagcaggagcactatacggcttcggatgact 5737  T
Q  102 ctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttctt 201  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||| |||||| ||    
T  5736 ctgctgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcttcttcatagatcctacagctgcttaccaaatcagagaagtttatt 5637  T
Q  202 atcttctgataaccaatagccctcttgat 230  Q
    || ||||||||||||||||||||||||||    
T  5636 attttctgataaccaatagccctcttgat 5608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 162; Significance: 1e-86; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 23274564 - 23274793
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||| || || |||||||| ||||||||||| ||||||||| |||||  |||||    
T  23274564 caaacaatttcagtaggagcatctctcctcttgggcctcctctcatcatttaacctctgcttacccttgtcagcaggagcactatactgcttcggacgac 23274663  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||| ||||||||||||||    
T  23274664 tctgttgtcccttgcccctacgttcactcatcaccttgtaatgagccttcgtatcctcttcatagatcctacagctgcttaccaactcagaaaagtttct 23274763  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    ||| ||||||||||||||||||||||||||    
T  23274764 tattttctgataaccaatagccctcttgat 23274793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 19716489 - 19716260
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||| || |||| ||||||||||||||| ||||||||| |||||||||||||||| ||||| || |||||| || ||||||| || || ||   |||||    
T  19716489 caaacgatctcagcaggagcatctctcctattgggcctcctctcatcattcaatctctgctttcccttgtcaacaagggcactgtatggtttaggacgac 19716390  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| ||||| ||||||||||||||||| ||||||||||| || || || ||||| ||||| || ||||||||||| ||||| || |||||    
T  19716389 tctgctgtcccttacctcttcgctcactcatcaccttataatgagctttagtgtcttcctcatatatcctgcagctgcttaccaactcagagaaatttct 19716290  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
     ||||||||||| ||||| || ||||||||    
T  19716289 aatcttctgatagccaatggctctcttgat 19716260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 19721052 - 19720823
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||| || |||| ||||||||||||||| ||||||||| |||||||||||||||| ||||| || |||||| || ||||||| || || ||   |||||    
T  19721052 caaacgatctcagcaggagcatctctcctattgggcctcctctcatcattcaatctctgctttcccttgtcaacaagggcactgtatggtttaggacgac 19720953  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| ||||| ||||||||||||||||| ||||||||||| || || || ||||| ||||| || ||||||||||| ||||| || |||||    
T  19720952 tctgctgtcccttacctcttcgctcactcatcaccttataatgagctttagtgtcttcctcatatatcctgcagctgcttaccaactcagagaaatttct 19720853  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
     ||||||||||| ||||| || ||||||||    
T  19720852 aatcttctgatagccaatggctctcttgat 19720823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 23097490 - 23097261
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||| || |||| ||||||||||||||||||||||||| |||||||||||| ||  ||||| || ||||||||||||||||| ||||||||     |||    
T  23097490 caaactatctcagcaggagcatctctcctcttgggcctcctctcatcattcagtcgttgctttcccttgtcagcaggggcactgtacggcttagggagac 23097391  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| ||| | || ||||| ||||||||||||||||||||||||||||| | ||| || || || || || || || ||||| || ||||||||  ||||    
T  23097390 tctgatgtgctttacctctccgctcactcatcaccttgtaatgagcttttgaatcttcctcgtagattctgcagctacttacaaactcagaaaaagttct 23097291  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
     ||||||||||| ||||  |||||||||||    
T  23097290 gatcttctgatagccaaaggccctcttgat 23097261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 28350846 - 28351068
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| |||| ||||||||||||| || ||| |||||||||||||||| ||||  || |||||| |||| |||||||| ||||||  |||||    
T  28350846 caaacaatctcagcaggaacatctctcctcttaggtctcctctcatcattcaatctttgctcccctttgtcaacaggagcactatagggcttcggacgac 28350945  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
      || || ||||||   || |||||| |  | ||||| || |||||| |||||||| |||||||||||||||| |||||||||||||||||||| | |||    
T  28350946 cttgctgacccttgttcctccgctcattactaaccttatagtgagctatcgtatccacttcataaatcctacagctgcttaccaattcagaaaattgtct 28351045  T
Q  201 tatcttctgataaccaatagccc 223  Q
     ||||||||||| ||||| ||||    
T  28351046 gatcttctgatagccaatggccc 28351068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 21901508 - 21901730
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| ||||||||| ||||||| ||||| || ||| |||||||||||||||| || || || ||||||||||| ||||| || ||||||  | |||    
T  21901508 caaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctctgtttccctttgtcagcaggagcactgtagggcttcggatgac 21901607  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
      || || || |||   ||   ||||||||| ||||| ||||||| |||||||||||| |||||||| ||||| ||||| |||||||||||||| | |||    
T  21901608 cttgatggcctttgttcctcttctcactcataaccttataatgagatttcgtatcctcctcataaattctacagctgctcaccaattcagaaaattgtct 21901707  T
Q  201 tatcttctgataaccaatagccc 223  Q
     ||||| || |||||||| ||||    
T  21901708 gatcttttggtaaccaatggccc 21901730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 34 - 194
Target Start/End: Original strand, 12577357 - 12577517
Alignment:
Q  34 ggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatca 133  Q
    |||||| |||||||||| | ||| |||||||| |||||||| |||||||||||||| ||   |||| |||| |||||||| ||||| |||||||||||||    
T  12577357 ggcctcctctcatcattaagtctctgcttacccttgtcagccggggcactatacggtttaggacgattctgatgtcccttacctcttcgctcactcatca 12577456  T
Q  134 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaa 194  Q
    | || ||||||||||| || ||||| || || |||||||| |  || ||||| ||||||||    
T  12577457 ctttataatgagctttggtgtcctcctcgtagatcctacagcgactcaccaaatcagaaaa 12577517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 58 - 233
Target Start/End: Original strand, 20848614 - 20848789
Alignment:
Q  58 tgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcct 157  Q
    ||||| || ||||||||||| ||||| || |||||   |||| ||||||||||||| || || | ||||||||| | ||| ||||||||||| || || |    
T  20848614 tgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgttgtcccttacccctcctctcactcataatcttataatgagctttggtgtctt 20848713  T
Q  158 cttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 233  Q
    |||||||||| || || ||| | ||||| ||||||||| |||| ||||  ||||| |||||||| |||||||||||    
T  20848714 cttcataaattctgcacctgttaaccaactcagaaaagattctgatctgttgatatccaatagctctcttgatgtc 20848789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 170
Target Start/End: Original strand, 24265407 - 24265507
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 169  Q
    |||||||||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| |||||||||||||| || ||||    
T  24265407 tcagcaggggcactgtacggcttaggacgactctgctgtcccttgccctttctctcattcactaccttgtagtgagccttcgtatcctcttcgtagatcc 24265506  T
Q  170 t 170  Q
    |    
T  24265507 t 24265507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 230
Target Start/End: Complemental strand, 22742306 - 22742209
Alignment:
Q  133 accttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    |||||||||||||| || ||||||||||| |||||||| |||||||| ||||  || || ||   ||  |||||||| |||||||| |||||||||||    
T  22742306 accttgtaatgagccttggtatcctcttcgtaaatcctgcaactgctcaccagctcggagaaaactcggatcttctggtaaccaattgccctcttgat 22742209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 219
Target Start/End: Complemental strand, 24817179 - 24817094
Alignment:
Q  134 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaata 219  Q
    |||||||||||||||| ||||| || ||||| || || |||||||| |||| |||||||||||  |  ||||||||||| ||||||    
T  24817179 ccttgtaatgagctttagtatcttcctcatagattctgcaactgctcaccagttcagaaaagtaacggatcttctgatacccaata 24817094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 170
Target Start/End: Original strand, 10871887 - 10871987
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 169  Q
    |||||||||||||| ||||||||   |||||||||||||||||| ||  | | |||| |||  |||||||| ||||| || ||||||||||| || ||||    
T  10871887 tcagcaggggcactgtacggcttaggacgactctgttgtcccttacccttcctctcattcactaccttgtagtgagccttggtatcctcttcgtagatcc 10871986  T
Q  170 t 170  Q
    |    
T  10871987 t 10871987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 170
Target Start/End: Original strand, 9338616 - 9338719
Alignment:
Q  67 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 166  Q
    |||||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||||| ||||| |    
T  9338616 ttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttggtatcctcctcataga 9338715  T
Q  167 tcct 170  Q
    ||||    
T  9338716 tcct 9338719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 170
Target Start/End: Original strand, 9487250 - 9487353
Alignment:
Q  67 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 166  Q
    |||||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||||| ||||| |    
T  9487250 ttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttggtatcctcctcataga 9487349  T
Q  167 tcct 170  Q
    ||||    
T  9487350 tcct 9487353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 24817312 - 24817221
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggctt 92  Q
    |||||||| ||||||| || |||| || |  | |||||| |||||||||||||||| || ||||| || |||||||| |||||||| |||||    
T  24817312 caaacaatctcagtagtagtatctttctttctaggcctcctctcatcattcaatctttgtttacccttatcagcaggagcactataaggctt 24817221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 170
Target Start/End: Complemental strand, 44382979 - 44382876
Alignment:
Q  67 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 166  Q
    |||||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||||| ||||| |    
T  44382979 ttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttggtatcctcctcataga 44382880  T
Q  167 tcct 170  Q
    ||||    
T  44382879 tcct 44382876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 153; Significance: 3e-81; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 62706 - 62478
Alignment:
Q  2 aaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgact 101  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||  ||||||    
T  62706 aaacaatatcagtaggagcatctctcctcttaggcctcctctcatcattcaatctctgcttacccttgtcagcaggggcactatacggcttcggacgact 62607  T
Q  102 ctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttctt 201  Q
    ||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || || |||||||| ||||| || || |||    
T  62606 ctgctgccccttgcctctacgctcactcatcaccttgtaatgagctttggtatcctcttcatatatcctgcagctacttaccaactcagagaaattcctt 62507  T
Q  202 atcttctgataaccaatagccctcttgat 230  Q
    ||||| ||||| |||||||||||||||||    
T  62506 atcttttgatagccaatagccctcttgat 62478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 44 - 230
Target Start/End: Complemental strand, 65214 - 65028
Alignment:
Q  44 catcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatg 143  Q
    ||||||||| ||| ||||| || || ||||||||||||||||| ||||||   |||||||||||||| ||    || | |||||||||||||||||||||    
T  65214 catcattcagtctctgcttgcccttatcagcaggggcactatatggcttcgggcgactctgttgtccattattccttctctcactcatcaccttgtaatg 65115  T
Q  144 agctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    |||||| ||||||||||||||||| || || || || ||||| ||||| || ||||| || |||||||||||||| || ||||||||    
T  65114 agcttttgtatcctcttcataaattctgcagctactcaccaactcagagaaatttctgattttctgataaccaatggctctcttgat 65028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 153; Significance: 3e-81; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 10 - 230
Target Start/End: Complemental strand, 21870383 - 21870163
Alignment:
Q  10 tcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtc 109  Q
    ||||||||||||||||||||||| |||||| || ||||||||||| | |||||||| |||||||||||||||||||||||||||  ||||||||| ||||    
T  21870383 tcagtaggagcatctctcctcttaggcctcctcccatcattcaatttctgcttacccttgtcagcaggggcactatacggcttcggacgactctgctgtc 21870284  T
Q  110 ccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctg 209  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || || |||||||||||||||||||| |||||||| ||    
T  21870283 ccttgcctctacgctcactcatcaccttgtaatgagctttggtatcctcttcatatatcctgcagctacttaccaattcagaaaagttccttatcttttg 21870184  T
Q  210 ataaccaatagccctcttgat 230  Q
    ||| |||||||||||||||||    
T  21870183 atagccaatagccctcttgat 21870163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 10 - 230
Target Start/End: Complemental strand, 21874663 - 21874443
Alignment:
Q  10 tcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtc 109  Q
    ||||||||||||||||||||||| |||||| || ||||||||||| | |||||||| |||||||||||||||||||||||||||  ||||||||| ||||    
T  21874663 tcagtaggagcatctctcctcttaggcctcctcccatcattcaatttctgcttacccttgtcagcaggggcactatacggcttcggacgactctgctgtc 21874564  T
Q  110 ccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctg 209  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || || |||||||||||||||||||| |||||||| ||    
T  21874563 ccttgcctctacgctcactcatcaccttgtaatgagctttggtatcctcttcatatatcctgcagctacttaccaattcagaaaagttccttatcttttg 21874464  T
Q  210 ataaccaatagccctcttgat 230  Q
    ||| |||||||||||||||||    
T  21874463 atagccaatagccctcttgat 21874443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 23563282 - 23563050
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||||||||||||||||||||||||||||| |||||| ||| || || |||||| | || |||||||| |||||||||||||||  || ||    
T  23563282 caaacaatgtcagtaggagcatctctcctcttgggcctcctctcattatttaacctctgcttatccttttcagcaggagcactatacggcttcggacaac 23563183  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||  |||||||| |||||||| |||||||||| ||||||||||||||| || ||||| ||||||||||| || || |||||||| | | | || |||||    
T  23563182 tcttctgtcccttacctctacgttcactcatcatcttgtaatgagctttagtgtcctcctcataaatcctgcagctacttaccaaattaaagaaatttct 23563083  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     ||||||||||||||||| || |||||||||||    
T  23563082 aatcttctgataaccaatggctctcttgatgtc 23563050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 230
Target Start/End: Complemental strand, 23078016 - 23077790
Alignment:
Q  4 acaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactct 103  Q
    ||||| |||| ||||||||||||||||||||||||| | ||||||||||   | ||||| || ||||||||||| ||||| || || ||   ||||||||    
T  23078016 acaatctcagcaggagcatctctcctcttgggcctcctatcatcattcatcttctgcttccctttgtcagcaggagcactgtaaggtttaggacgactct 23077917  T
Q  104 gttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttat 203  Q
    | |||||||| || || | ||||||||| ||||||||||||||||| || || || ||||| ||||| || ||||||||||| ||||| ||  |||| ||    
T  23077916 gctgtcccttacccctcctctcactcattaccttgtaatgagctttggtgtcttcctcatatatcctgcagctgcttaccaactcagagaaaattctaat 23077817  T
Q  204 cttctgataaccaatagccctcttgat 230  Q
    ||||||||| |||||||| || |||||    
T  23077816 cttctgatacccaatagctcttttgat 23077790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 21983291 - 21983074
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| |||| ||||||| ||||| || ||| |||||||||||||||| ||||| || |||||||||||  |||| || ||||||  |||||    
T  21983291 caaacaatctcagcaggaacatctcttctcttaggtctcctctcatcattcaatctttgcttccctttgtcagcaggaacactgtagggcttcggacgac 21983192  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
      || || || |||   || ||||||||||| | ||| |||||||||||||||||||| |||||||| ||||| ||||| || ||||||||||| |||||    
T  21983191 cttgctgacctttgttcctccgctcactcataaacttataatgagctttcgtatcctcctcataaattctacagctgctcacaaattcagaaaattttct 21983092  T
Q  201 tatcttctgataaccaat 218  Q
     ||||| |||||||||||    
T  21983091 gatcttttgataaccaat 21983074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 206
Target Start/End: Original strand, 23669887 - 23670091
Alignment:
Q  2 aaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgact 101  Q
    ||||||| |||| |||||||||||||||||| || ||| |||||||||||||||| ||||  || |||||| |||| ||||| || ||||||   ||||     
T  23669887 aaacaatctcagcaggagcatctctcctcttaggtctcctctcatcattcaatctttgctctcctttgtcaacaggagcactgtagggcttcggtcgacc 23669986  T
Q  102 ctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttctt 201  Q
     ||||| ||||||   || |||||| || |  |||| || ||||||||||||||||| || ||||||||||| ||||| |||||||||||||| ||||||    
T  23669987 ttgttgacccttgttcctccgctcattcctagccttatagtgagctttcgtatcctcctcgtaaatcctacagctgctcaccaattcagaaaaatttctt 23670086  T
Q  202 atctt 206  Q
    |||||    
T  23670087 atctt 23670091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 34 - 233
Target Start/End: Complemental strand, 17266415 - 17266216
Alignment:
Q  34 ggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatca 133  Q
    |||||| |||||||||| | ||| |||||||| ||||||||||||||||||||||| ||   ||||||||| || || || ||||| |||||||||||||    
T  17266415 ggcctcctctcatcattaagtctctgcttacccttgtcagcaggggcactatacggtttaggacgactctgatgccctttacctcttcgctcactcatca 17266316  T
Q  134 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 233  Q
    |||| ||||||||||| || ||||| || || |||||||| |  |||||||| ||||| ||  |||| ||||  || || || |||||||||||||||||    
T  17266315 ccttataatgagctttggtgtcctcctcgtagatcctacagcgacttaccaaatcagagaaaattctaatctgttggtatcctatagccctcttgatgtc 17266216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 20345536 - 20345768
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| ||||||||||||||||||||||||| | ||||||  ||   | ||||| || ||||||||||| |||||||| |||||   ||||     
T  20345536 caaacaatctcagcaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactataaggcttaggacgat 20345635  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||  |||||||| || || | ||||||||| | ||||||||||||||| || || || |||||||| || || ||  | ||||| |||||||||  |||    
T  20345636 tctactgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcctcataaattctgcacctattaaccaactcagaaaagactct 20345735  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     |||| |||||| |||||||| || ||||||||    
T  20345736 gatctgctgatacccaatagctcttttgatgtc 20345768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 22505933 - 22506165
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| |||||||||||||||||| |||||| | ||||||||||   | ||||| || ||||||||||| ||||| || |||||   ||||     
T  22505933 caaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattcatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgat 22506032  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| || || | ||||||||| | ||| ||||||||||| || || ||||||||||| || || ||| | ||||| ||||| |||  |||    
T  22506033 tctgctgtcccttacccctcctctcactcattatcttataatgagctttggtgtcttcttcataaattctgcacctgttaaccaactcagagaagactct 22506132  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     || | |||||| |||||||| || ||||||||    
T  22506133 gatttgctgatatccaatagctcttttgatgtc 22506165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 223
Target Start/End: Original strand, 43122740 - 43122943
Alignment:
Q  20 catctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctct 119  Q
    ||||||||||||| || ||| |||||||||||||||| ||||  || |||||| || | ||||| || ||||||   |||   ||||| ||||||   ||    
T  43122740 catctctcctcttaggtctcctctcatcattcaatctttgctctcctttgtcaacatgagcactgtagggcttcggccgatcttgttgacccttgttcct 43122839  T
Q  120 acgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaata 219  Q
     |||||| || | ||||| || ||||||||||||||||| || ||||||||||| ||||| |||||||||||||| ||||||||||| || || |||||     
T  43122840 ccgctcattcctaaccttatagtgagctttcgtatcctcctcgtaaatcctacagctgctcaccaattcagaaaaatttcttatcttttggtacccaatg 43122939  T
Q  220 gccc 223  Q
    ||||    
T  43122940 gccc 43122943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 21561139 - 21560917
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| |||| ||||||| ||||| || ||| |||||||||||||||| || || || ||||||||||  ||||| || ||||||  |||||    
T  21561139 caaacaatctcagcaggaacatctcttctcttaggtctcctctcatcattcaatctttgtttccctttgtcagcagtagcactgtagggcttcggacgac 21561040  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
      || || || |||   || | ||||||||| ||||| ||| | |||||||||||||| |||||||| ||||| ||||| ||||||| |||||| |  ||    
T  21561039 cttgctgacctttgttcctcctctcactcataaccttataacgggctttcgtatcctcctcataaattctacagctgctcaccaatttagaaaattacct 21560940  T
Q  201 tatcttctgataaccaatagccc 223  Q
     ||||| ||||||||||| ||||    
T  21560939 gatcttttgataaccaatggccc 21560917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 14884105 - 14883873
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| ||||  |||||||||||||||||||||||| | ||||||  ||  || ||||| || ||||||| ||| ||||| || |||||   ||||     
T  14884105 caaacaatctcagctggagcatctctcctcttgggcctcctatcatcacccatcctctgctttcctttgtcagtaggagcactgtaaggcttaggacgat 14884006  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| || || | ||||||||| | ||| ||||||||||| || || |||||||| || || || ||  | ||||| ||||| |||  |||    
T  14884005 tctgttgtcccttacccctcctctcactcataatcttataatgagctttggtgtcttcttcatagattctgcacctattaaccaactcagagaagactct 14883906  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     |||| |||||| ||||||||||| ||||||||    
T  14883905 gatctgctgatacccaatagcccttttgatgtc 14883873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 230
Target Start/End: Original strand, 23474497 - 23474695
Alignment:
Q  32 tgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcat 131  Q
    |||||||| |||||||||||||||| |||||||| || |||||||| ||| | || |||||   |||||| || || ||||||||| | | |||| |||     
T  23474497 tgggcctcctctcatcattcaatctttgcttacccttatcagcaggagcaatgtaaggctttggacgactttgctgacccttgcctttcctctcattcac 23474596  T
Q  132 caccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
     |||||||||||||| || ||||| || ||||  || || || ||||| ||||| ||||||||||| |  |||||||| |||||||| |||| ||||||    
T  23474597 aaccttgtaatgagccttagtatcttcctcatgtattctgcagctgctcaccaactcagaaaagttacggatcttctggtaaccaattgcccgcttgat 23474695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 233
Target Start/End: Original strand, 25851342 - 25851558
Alignment:
Q  17 gagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcc 116  Q
    ||||||||||||||||||||||| | ||||||  ||   | ||||| || ||||||||||| ||||| || |||||   |||| |||| |||||||| ||    
T  25851342 gagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttacc 25851441  T
Q  117 tctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 216  Q
     || | ||||||||| | ||||||||||||||| || || ||||||||||| || || ||  | ||||| ||||| ||   ||| |||| |||||| |||    
T  25851442 cctcctctcactcattatcttgtaatgagctttggtgtcttcttcataaattctgcacctattaaccaactcagagaaaactctgatctgctgataccca 25851541  T
Q  217 atagccctcttgatgtc 233  Q
    ||||| || ||||||||    
T  25851542 atagctcttttgatgtc 25851558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 170
Target Start/End: Complemental strand, 22329935 - 22329835
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 169  Q
    |||||||||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| ||||||||||||||||| ||||    
T  22329935 tcagcaggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcc 22329836  T
Q  170 t 170  Q
    |    
T  22329835 t 22329835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 230
Target Start/End: Complemental strand, 21331967 - 21331874
Alignment:
Q  137 tgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    |||||||||| || |||||||| ||||||||||| |||||||| ||||  |||||||| || |  |||||||| |||||||| |||| ||||||    
T  21331967 tgtaatgagccttagtatcctcctcataaatcctgcaactgctcaccagctcagaaaaattacggatcttctggtaaccaattgcccgcttgat 21331874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 212
Target Start/End: Complemental strand, 28891934 - 28891845
Alignment:
Q  123 ctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 212  Q
    |||||||||||||||||||||||| ||||||||||| |||||||| || || |  || |||||||| || ||  |||| |||||||||||    
T  28891934 ctcactcatcaccttgtaatgagccttcgtatcctcctcataaattctgcagcaactcaccaattctgagaaaattctgatcttctgata 28891845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 170
Target Start/End: Complemental strand, 14996787 - 14996687
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 169  Q
    |||||||||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||| ||| ||||| ||||||||||||||||| ||||    
T  14996787 tcagcaggggcactgtacggcttaggacgactctgctgtcccttgccctttctctcattcactacctcgtagtgagccttcgtatcctcttcatagatcc 14996688  T
Q  170 t 170  Q
    |    
T  14996687 t 14996687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 170
Target Start/End: Original strand, 19773298 - 19773398
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 169  Q
    ||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| ||||||||||||||||| ||||    
T  19773298 tcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcc 19773397  T
Q  170 t 170  Q
    |    
T  19773398 t 19773398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 170
Target Start/End: Complemental strand, 27682448 - 27682348
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 169  Q
    |||||||||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| |||||||||||||| || ||||    
T  27682448 tcagcaggggcactgtacggcttaggacgactctgctgtcccttgccctttctctcattcactaccttgtagtgagccttcgtatcctcttcgtagatcc 27682349  T
Q  170 t 170  Q
    |    
T  27682348 t 27682348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 170
Target Start/End: Original strand, 27521741 - 27521844
Alignment:
Q  67 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 166  Q
    ||||||||||||||||| ||||||||   ||||||||| |||||||| ||  | | |||| |||  |||||||| ||||| ||||| ||||||||||| |    
T  27521741 ttgtcagcaggggcactgtacggcttaggacgactctgctgtcccttacccttcctctcattcactaccttgtagtgagccttcgtgtcctcttcataga 27521840  T
Q  167 tcct 170  Q
    ||||    
T  27521841 tcct 27521844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 27613694 - 27613785
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttc 161  Q
    |||||||||||||| ||||||||   |||||||||||||||||||||  | |  ||| |||  |||||||| ||||| ||||||||||||||    
T  27613694 tcagcaggggcactgtacggcttaggacgactctgttgtcccttgcccttcctttcattcactaccttgtagtgagccttcgtatcctcttc 27613785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 233
Target Start/End: Original strand, 22465330 - 22465436
Alignment:
Q  127 ctcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctct 226  Q
    ||||||||||| |||||||| || |||||||| |||||||| ||||| || || |||||||  || ||  || | ||||||||||| ||||| || ||||    
T  22465330 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaattatgagaaaattatgatcttctgatatccaatggctctct 22465429  T
Q  227 tgatgtc 233  Q
    |||||||    
T  22465430 tgatgtc 22465436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 21631381 - 21631296
Alignment:
Q  133 accttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaat 218  Q
    ||||||||||||||||||||||| || ||||| || || |||||||| |||| |||| |||| || |  ||||||||||| |||||    
T  21631381 accttgtaatgagctttcgtatcttcctcatagattctgcaactgctcaccagttcataaaatttacggatcttctgatatccaat 21631296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 227
Target Start/End: Original strand, 20824833 - 20824933
Alignment:
Q  127 ctcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctct 226  Q
    |||||||||||||||||||  ||||||||||| || ||||| || || || || |||||||| || ||  |||| ||||||||||| ||||| || ||||    
T  20824833 ctcatcaccttgtaatgagtcttcgtatcctcctcgtaaattctgcagctactcaccaattctgagaaaattctgatcttctgatacccaatggctctct 20824932  T
Q  227 t 227  Q
    |    
T  20824933 t 20824933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 170
Target Start/End: Complemental strand, 29473121 - 29473021
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 169  Q
    ||||| ||| |||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| ||||||||||||||||| ||||    
T  29473121 tcagcggggacactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagcattcgtatcctcttcatagatcc 29473022  T
Q  170 t 170  Q
    |    
T  29473021 t 29473021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 170
Target Start/End: Original strand, 16359837 - 16359940
Alignment:
Q  67 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 166  Q
    |||||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||||| ||||| |    
T  16359837 ttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttggtatcctcctcataga 16359936  T
Q  167 tcct 170  Q
    ||||    
T  16359937 tcct 16359940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 25429826 - 25429885
Alignment:
Q  135 cttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaa 194  Q
    |||||||||||| || |||||||| ||||||||||| |||||||| ||||  ||||||||    
T  25429826 cttgtaatgagccttggtatcctcctcataaatcctgcaactgctcaccagctcagaaaa 25429885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 170
Target Start/End: Original strand, 34569829 - 34569932
Alignment:
Q  67 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 166  Q
    |||||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||||| ||||| |    
T  34569829 ttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttggtatcctcctcataga 34569928  T
Q  167 tcct 170  Q
    ||||    
T  34569929 tcct 34569932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 164
Target Start/End: Complemental strand, 37288544 - 37288450
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 164  Q
    ||||| || ||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| |||||||||||||||||    
T  37288544 tcagcgggagcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcata 37288450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 20770518 - 20770603
Alignment:
Q  127 ctcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 212  Q
    ||||||||||| || ||||| || |||||||| |||||||| ||||| || || |||||||| || ||  |||| |||||||||||    
T  20770518 ctcatcaccttatagtgagcctttgtatcctcctcataaattctacagctcctcaccaattccgagaaaattctgatcttctgata 20770603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 20779293 - 20779378
Alignment:
Q  127 ctcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 212  Q
    ||||||||||| || ||||| || |||||||| |||||||| ||||| ||||| | |||||| || ||  |||| |||||||||||    
T  20779293 ctcatcaccttatagtgagcctttgtatcctcctcataaattctacagctgctcaacaattccgagaaaattctgatcttctgata 20779378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 167
Target Start/End: Original strand, 21410415 - 21410572
Alignment:
Q  10 tcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtc 109  Q
    |||||||||| ||||||| |  |||||||| ||| ||||||||  ||||||||||| || ||||| || ||||| || || ||   |||||| |||||      
T  21410415 tcagtaggagtatctctctttctgggcctcctcttatcattcaccctatgcttacccttatcagctggagcactgtaaggtttaccacgactttgttggt 21410514  T
Q  110 ccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaat 167  Q
     ||| || || |||||| |||| | ||| ||||||||||| || || |||||||||||    
T  21410515 gcttacccctccgctcattcataatcttataatgagctttggtgtcatcttcataaat 21410572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 26735708 - 26735648
Alignment:
Q  135 cttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaag 195  Q
    |||||||||||| || |||||||| |||||||| || |||||||| ||||  |||||||||    
T  26735708 cttgtaatgagccttagtatcctcctcataaattctgcaactgctcaccagctcagaaaag 26735648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 150; Significance: 2e-79; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 29993 - 30222
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||| || ||||||||| |||||||||||||||||||| |||||||||| || || |||||||| ||||||||||| |||||||||||||||  |||||    
T  29993 caaactatgtcagtaggaacatctctcctcttgggcctcctctcatcatttaaactctgcttacccttgtcagcaggagcactatacggcttcggacgac 30092  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||| ||||| ||||||||    
T  30093 tctgctgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtgtcctcctcataaatcctacagctgcttaccaaatcagagaagtttct 30192  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    ||| |||||||||||||| || ||||||||    
T  30193 tattttctgataaccaatggctctcttgat 30222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 49115 - 48883
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||| || |||| ||||||||| ||||| || |||||| | |||||||||| ||| ||||| || |||||||| |||||||||||||| ||   |||||    
T  49115 caaactatctcagcaggagcatccctcctattcggcctcctttcatcattcagtctctgctttcccttgtcagccggggcactatacggtttaggacgac 49016  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| ||||| ||||||||||||||||| ||||||||||| |  ||||| ||||| ||||| ||||  |||||||| ||||| ||  ||||    
T  49015 tctgctgtcccttacctcttcgctcactcatcaccttataatgagcttttgagtcctcctcatatatcctgcaacgacttaccaaatcagagaaaattct 48916  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     |||| |||||| || || || |||||||||||    
T  48915 aatctgctgataccctatggctctcttgatgtc 48883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 58149 - 57917
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||| || |||| ||||||||| ||||| || |||||| | |||||||||| ||| ||||| || |||||||| |||||||||||||| ||   |||||    
T  58149 caaactatctcagcaggagcatccctcctattcggcctcctttcatcattcagtctctgctttcccttgtcagccggggcactatacggtttaggacgac 58050  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| ||||| ||||||||||||||||| ||||||||||| |  ||||| ||||| ||||| ||||  |||||||| ||||| ||  ||||    
T  58049 tctgctgtcccttacctcttcgctcactcatcaccttataatgagcttttgagtcctcctcatatatcctgcaacgacttaccaaatcagagaaaattct 57950  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     |||| |||||| || || || |||||||||||    
T  57949 aatctgctgataccctatggctctcttgatgtc 57917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 64537 - 64305
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||| || |||| ||||||||| ||||| || |||||| | |||||||||| ||| ||||| || |||||||| |||||||||||||| ||   |||||    
T  64537 caaactatctcagcaggagcatccctcctattcggcctcctttcatcattcagtctctgctttcccttgtcagccggggcactatacggtttaggacgac 64438  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| ||||| ||||||||||||||||| ||||||||||| |  ||||| ||||| ||||| ||||  |||||||| ||||| ||  ||||    
T  64437 tctgctgtcccttacctcttcgctcactcatcaccttataatgagcttttgagtcctcctcatatatcctgcaacgacttaccaaatcagagaaaattct 64338  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     ||||  ||||| || || || |||||||||||    
T  64337 aatctgttgataccctatggctctcttgatgtc 64305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 4388 - 4160
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || || |||||||| ||||||||||| ||| | |||||||||  |||||    
T  4388 caaacaatatcagtaggagcatctctcctcttgggcctcctctcatcatttaaactctgcttacccttgtcagcaggagcagtgtacggcttcggacgac 4289  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||| ||||| ||||||||    
T  4288 tctgttgtcccttgcctctacgttcactcatcaccttgtaatgag-tttcgtatcctcctcataaatcctacagctgcttaccaaatcagagaagtttct 4190  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    ||| |||||||||||||| || ||||||||    
T  4189 tattttctgataaccaatggctctcttgat 4160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 10 - 230
Target Start/End: Complemental strand, 1237 - 1017
Alignment:
Q  10 tcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtc 109  Q
    |||||||||||||||||||||||||||||| ||||||||||||  || || ||||| ||||||||||| ||||| || ||||||  ||||||||||||||    
T  1237 tcagtaggagcatctctcctcttgggcctcctctcatcattcagcctctgtttacccttgtcagcaggagcactgtatggcttcggacgactctgttgtc 1138  T
Q  110 ccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||| |||      
T  1137 ccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcatagatcctacagctgcttaccaaatcagagaagtttcttattttcga 1038  T
Q  210 ataaccaatagccctcttgat 230  Q
    |||||||||||||||||||||    
T  1037 ataaccaatagccctcttgat 1017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 10 - 230
Target Start/End: Original strand, 8122 - 8342
Alignment:
Q  10 tcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtc 109  Q
    |||||||||||||||||||||||||||||| ||||||||||||  || || ||||| ||||||||||| ||||| || ||||||  ||||||||||||||    
T  8122 tcagtaggagcatctctcctcttgggcctcctctcatcattcagcctctgtttacccttgtcagcaggagcactgtatggcttcggacgactctgttgtc 8221  T
Q  110 ccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||| |||      
T  8222 ccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcatagatcctacagctgcttaccaaatcagagaagtttcttattttcga 8321  T
Q  210 ataaccaatagccctcttgat 230  Q
    |||||||||||||||||||||    
T  8322 ataaccaatagccctcttgat 8342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 5550 - 5778
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||| ||||||| ||||||||| |||||||||  | |||    
T  5550 caaacaatatcagtaggagcatctctcctcttgg-cctcctctcatcattcaatctctgcttacccttgtcagtaggggcactgtacggcttccgatgac 5648  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| ||||||||| ||||| ||||||||||||| |||||||||||||| |||||||||||||||||| |  | || |||||||||||||||||||| ||    
T  5649 tctgctgtcccttgactctatgctcactcatcactttgtaatgagctttggtatcctcttcataaatcttgtagctacttaccaattcagaaaagttcct 5748  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    ||||||||||||||||||||||||||||||    
T  5749 tatcttctgataaccaatagccctcttgat 5778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 115993 - 116222
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||||||||||||||||||||| |||||||| |||||| |||||||||||| ||| | |||||| ||||||||||| |||||||||||||||  |||||    
T  115993 caaacaatatcagtaggagcatccctcctcttaggcctcctctcatcattcagtctcttcttacccttgtcagcaggagcactatacggcttcggacgac 116092  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| | |||||||| ||||||||||| ||||| || |||||    
T  116093 tctgctgtcccttgcctctacgctcactcatcaccttgtaatgagctttcaaatcttcttcacagatcctacagctgcttaccaaatcagagaaatttct 116192  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    ||| ||||||||||||||||||||||||||    
T  116193 tattttctgataaccaatagccctcttgat 116222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 142; Significance: 1e-74; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 70477 - 70706
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||| ||| ||||||||||||||||||||||| |||||| ||||||||||||  || || ||||| ||||||||||| ||||||||||| |||  |||||    
T  70477 caaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcaggagcactatacggtttcggacgac 70576  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| ||||| |||||||||||||| || ||||||||||| |||||||||||||| || ||||| |||||||||||||||||||| |||||    
T  70577 tctgttgtcccttacctctgcgctcactcatcactttataatgagctttggtatcctcttcatagattctacagctgcttaccaattcagaaaaatttct 70676  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    ||||||||||||||||||||||||||||||    
T  70677 tatcttctgataaccaatagccctcttgat 70706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 230
Target Start/End: Original strand, 433 - 527
Alignment:
Q  136 ttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    |||||||| ||||| |||||| ||||||| || || |||||||| || | ||||| |||||| |  ||||||||||| ||||| |||| ||||||    
T  433 ttgtaatgtgctttggtatccacttcatagattctgcaactgctcactagttcagtaaagttacagatcttctgatatccaattgcccgcttgat 527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 142; Significance: 1e-74; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 21928834 - 21929063
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||| ||| ||||||||||||||||||||| | |||||| ||||||||||||  || || || || ||||||||||| ||||||||||| ||   |||||    
T  21928834 caaagaatctcagtaggagcatctctcctcctaggcctcctctcatcattcagcctctgttttcctttgtcagcaggagcactatacggtttaggacgac 21928933  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| |||||||||||||||||||| |||||    
T  21928934 tctgttgtcccttacctctacgctcactcatcaccttgtaatgagctttggtatcctcttcatagattctacagctgcttaccaattcagaaaaatttct 21929033  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    ||||||||||||||||||||||||||||||    
T  21929034 tatcttctgataaccaatagccctcttgat 21929063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 19985586 - 19985815
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| ||||||||||||||||||||||| |||||| |||||||| |||  || || ||||| ||||| |||||||||||||||||||||  |||||    
T  19985586 caaacaatctcagtaggagcatctctcctcttaggcctcctctcatcaatcatcctctgtttacccttgtccgcaggggcactatacggcttcggacgac 19985685  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| | ||||||||| || ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||| ||| |    
T  19985686 tctgctatcccttgccactgcgctcactcatcaccttgtaatgagctttggtatcctcttcatatatcctacaactgcttaccaaatcagaaaaatttat 19985785  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    |||||| ||||||||||| |||| ||||||    
T  19985786 tatcttttgataaccaatggcccgcttgat 19985815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 22027655 - 22027423
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||| || |||| ||||||||||||||| ||||||||| |||||||||||||||| ||||| || ||||||||||||||||| ||||| ||   |||||    
T  22027655 caaactatctcagcaggagcatctctcctattgggcctcctctcatcattcaatctttgctttcccttgtcagcaggggcactgtacggtttaggacgac 22027556  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| || || ||||||||||||||||| |||||| |||| || ||||| ||||| ||||| ||||  |||||||| ||||| ||  ||||    
T  22027555 tctgctgtcccttaccacttcgctcactcatcaccttataatgatcttttgtgtcctcctcatagatcctgcaacgacttaccaaatcagagaaaattct 22027456  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     ||||  ||||| || || || |||||||||||    
T  22027455 aatctgttgataccctatggctctcttgatgtc 22027423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 206
Target Start/End: Original strand, 22374278 - 22374480
Alignment:
Q  4 acaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactct 103  Q
    ||||| |||||||||| |||||||||| | |||||| |||| ||||| | ||| || ||||| ||| ||||||||||||||||||| |||  ||||||||    
T  22374278 acaatctcagtaggagaatctctcctcctaggcctcctctcctcattaagtctttgtttacctttgacagcaggggcactatacggtttcggacgactct 22374377  T
Q  104 gttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttat 203  Q
      |||||||| ||||| ||||||||||||||||| ||||||||||| |||||||| | ||| |||||||| || || ||||| |||||||| || |||||    
T  22374378 actgtcccttacctctgcgctcactcatcaccttataatgagcttttgtatcctcctgatagatcctacagctactcaccaaatcagaaaaattccttat 22374477  T
Q  204 ctt 206  Q
    |||    
T  22374478 ctt 22374480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 31413907 - 31413678
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||  ||||||||||||||||||||||||| |||||||||||| ||| ||||| || |||||||||||||| || || || ||   |||||    
T  31413907 caaacaatttcaacaggagcatctctcctcttgggcctcctctcatcattcattctctgctttcccttgtcagcaggggcgctgtaaggtttaggacgac 31413808  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| || || |||||||||||||  |||||||||||||| || || || ||||| ||||| || ||| ||||||| | ||| ||  || |    
T  31413807 tctgctgtcccttaccccttcgctcactcatcattttgtaatgagctttggtgtcttcctcatatatcctgcagctgtttaccaacttagagaaaatttt 31413708  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
     ||||||||||| |||||||| || |||||    
T  31413707 aatcttctgatacccaatagctcttttgat 31413678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 20391492 - 20391714
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| |||| ||||||| ||||| || ||| |||||||||||||||| || || || ||||||||||| ||||| || ||||||  |||||    
T  20391492 caaacaatctcagaaggaacatctctactcttaggtctcctctcatcattcaatctttgtttccctttgtcagcaggagcactgtagggcttcggacgac 20391591  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
      || || || |||   || ||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||| ||||| |||||||||||||| |  ||    
T  20391592 cttgctgacctttgttcctccgctcactcataaccttataatgagctttggtatcctcttcataaattctacagctgctcaccaattcagaaaattgcct 20391691  T
Q  201 tatcttctgataaccaatagccc 223  Q
     ||||| ||||| ||||| ||||    
T  20391692 gatcttttgatacccaatggccc 20391714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 22054269 - 22054443
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||| || |||| || |||||||||||| || |||||| |||||||||| | ||| |||||||| || |||||||||||||| ||||||||   |||||    
T  22054269 caaactatctcagcagaagcatctctcctattcggcctcctctcatcattaagtctctgcttacccttatcagcaggggcactgtacggcttaggacgac 22054368  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaac 175  Q
    ||||  ||||||| ||||| ||||||||||||||||| ||||||||||| || ||||| ||| | ||||| ||||    
T  22054369 tctgccgtcccttacctcttcgctcactcatcaccttataatgagctttggtgtcctcctcacagatcctgcaac 22054443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 233
Target Start/End: Original strand, 28984332 - 28984549
Alignment:
Q  16 ggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgc 115  Q
    |||||||||||||||||||||||| | ||||||  ||  || ||||| || ||||| ||||| ||||| || |||||   |||| ||||||||||||| |    
T  28984332 ggagcatctctcctcttgggcctcctatcatcacccatcctctgctttcccttgtccgcaggagcactgtaaggcttaggacgattctgttgtcccttac 28984431  T
Q  116 ctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacc 215  Q
    | || | ||||||||| | ||||||||||||||| || || ||||||||||||||||| ||| | ||||| |||||||||  ||| ||||  ||||| ||    
T  28984432 ccctcctctcactcataatcttgtaatgagctttggtgtcttcttcataaatcctacacctgttaaccaactcagaaaagactctgatctgttgatatcc 28984531  T
Q  216 aatagccctcttgatgtc 233  Q
    ||| || || ||||||||    
T  28984532 aatggctcttttgatgtc 28984549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 16268599 - 16268367
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| ||||||||||||| |||| |||||| | |||||| |||   | ||||| || ||||||||| | ||||| || |||||   ||||     
T  16268599 caaacaatctcagaaggagcatctctcttcttaggcctcctgtcatcactcatcttctgctttcctttgtcagcaagagcactgtaaggcttaggacgat 16268500  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| || || | ||||||||| |  |||||||||||||| || || ||||||||||| ||||||||  | ||||| ||||| |||  |||    
T  16268499 tctgttgtcccttacccctcctctcactcattatattgtaatgagctttggtgtcttcttcataaattctacaactattaaccaactcagagaagactct 16268400  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     |||| |||||| ||||||||||| ||||||||    
T  16268399 gatctgctgatacccaatagcccttttgatgtc 16268367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 29300801 - 29300569
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| ||||  ||| |||||| ||||||||||||| | ||||||||||   | ||||| || ||||||||||| ||||| || || ||   |||||    
T  29300801 caaacaatttcagcgggaacatctcccctcttgggcctcctatcatcattcatcttctgcttccctttgtcagcaggagcactgtaaggtttaggacgac 29300702  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||  |||||||| || || | ||||||||| ||||||||||||||||| || ||||| ||||| ||||| || |||||||| || ||||| ||   |||    
T  29300701 tctaatgtcccttacccctcctctcactcattaccttgtaatgagcttttgtgtcctcctcatatatcctgcagctgcttactaactcagagaaaactct 29300602  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     ||||||||||| |||||||| || ||||||||    
T  29300601 aatcttctgatacccaatagctcttttgatgtc 29300569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 134 - 233
Target Start/End: Complemental strand, 21970793 - 21970694
Alignment:
Q  134 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 233  Q
    |||| ||||| ||||| ||||| || |||||||||||||| || || ||||| |||||||||||||| ||||||||||||||||| || |||||||||||    
T  21970793 ccttataatgggctttggtatcatcctcataaatcctacagctactcaccaactcagaaaagtttctaatcttctgataaccaatggctctcttgatgtc 21970694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 134 - 232
Target Start/End: Complemental strand, 22004323 - 22004225
Alignment:
Q  134 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgt 232  Q
    |||| ||||||||||| ||||| ||||||||||||||||| || || ||||| | |||||||||| | ||||||||||||||||| || ||||||||||    
T  22004323 ccttataatgagctttggtatcatcttcataaatcctacagctactcaccaacttagaaaagtttataatcttctgataaccaatggctctcttgatgt 22004225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 6606844 - 6606651
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| ||||||||| ||||||| ||||| || ||| |||||||||||||||| ||||  ||  |||||  |||  |||| || ||||||  ||| |    
T  6606844 caaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctttgctctcctctgtcaataggaacactgtagggcttcggacgtc 6606745  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaa 194  Q
      || || ||||||   || ||||||||| | ||||| |||||||| ||||||||||| |||||||| |||||||| || ||||||||||||||    
T  6606744 cttgctgacccttgttcctccgctcactcctaaccttataatgagccttcgtatcctcctcataaattctacaactactcaccaattcagaaaa 6606651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 218
Target Start/End: Original strand, 22523930 - 22524133
Alignment:
Q  15 aggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttg 114  Q
    |||||||||| || || | |||| | |||||||||| | ||| || || || || |||||||||||||| || |||||   ||||||||| || || |||    
T  22523930 aggagcatctttcttcctaggccgcctctcatcattaactctttgttttcccttatcagcaggggcactgtaaggctttggacgactctgctgacctttg 22524029  T
Q  115 cctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataac 214  Q
    ||| | |||||| |||  | |||||||||||| || |||||||| | ||||||||| |||||||| ||||  || |||||||| |  |||||||| ||||    
T  22524030 ccttttcgctcattcacaatcttgtaatgagccttagtatcctccttataaatcctgcaactgctcaccagctcggaaaagttacggatcttctggtaac 22524129  T
Q  215 caat 218  Q
    ||||    
T  22524130 caat 22524133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 173
Target Start/End: Original strand, 18860049 - 18860152
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 169  Q
    ||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| ||||||||||||||||| ||||    
T  18860049 tcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcc 18860148  T
Q  170 taca 173  Q
    ||||    
T  18860149 taca 18860152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 230
Target Start/End: Original strand, 21671981 - 21672150
Alignment:
Q  61 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 160  Q
    ||||| || |||||||| ||||| || |||||   ||||||||| || |||||| |  | |||||| |||  | |||||||||||  || | |||||| |    
T  21671981 ttacccttatcagcaggagcactgtaaggcttaggacgactctgctgacccttggcctttcgctcattcacaatcttgtaatgagtcttggcatcctcct 21672080  T
Q  161 cataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    |||||||||| |||||||| ||||  |||||||||  ||  |||||||| |||||||| |||||||||||    
T  21672081 cataaatcctgcaactgctcaccagctcagaaaagactcggatcttctggtaaccaattgccctcttgat 21672150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 170
Target Start/End: Complemental strand, 22126268 - 22126168
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 169  Q
    ||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| ||||||||||||||||| ||||    
T  22126268 tcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcc 22126169  T
Q  170 t 170  Q
    |    
T  22126168 t 22126168  T

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Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 218
Target Start/End: Original strand, 22990520 - 22990668
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 169  Q
    |||||||| ||||| || |||||   |||||| || || || |||||| | |||||| |||  | |||||||||||| || ||||| || ||||||||||    
T  22990520 tcagcaggagcactgtaaggctttggacgactttgctgacctttgcctttccgctcattcacaatcttgtaatgagccttagtatcttcctcataaatcc 22990619  T
Q  170 tacaactgcttaccaattcagaaaagtttcttatcttctgataaccaat 218  Q
    | |||||||| ||||  |||||||| || |  |||||||| ||||||||    
T  22990620 tgcaactgctcaccagctcagaaaaattacggatcttctggtaaccaat 22990668  T

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Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 164
Target Start/End: Complemental strand, 19481390 - 19481287
Alignment:
Q  61 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 160  Q
    ||||| |||||||| |||||||| ||||||||   ||||||||| |||||||| ||  | | |||| |||  |||||||| | ||| |||||||||||||    
T  19481390 ttacccttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttacccttcctctcattcactaccttgtagtaagccttcgtatcctctt 19481291  T
Q  161 cata 164  Q
    ||||    
T  19481290 cata 19481287  T

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Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 230
Target Start/End: Complemental strand, 22421134 - 22421039
Alignment:
Q  135 cttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    |||||||||||| || |||||||| ||||||||||| |||||||| |||   |  |||||||| |  |||||||| |||||||| |||| ||||||    
T  22421134 cttgtaatgagccttagtatcctcctcataaatcctgcaactgctcacctggttggaaaagttacggatcttctggtaaccaattgcccgcttgat 22421039  T

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Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 232
Target Start/End: Complemental strand, 21982196 - 21982098
Alignment:
Q  134 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgt 232  Q
    |||| ||||| ||||| ||||| || ||||||||||| || || || ||||| | | |||||||| | ||||||||||||||||| ||  |||||||||    
T  21982196 ccttataatgggctttggtatcatcctcataaatccttcagctactcaccaaattaaaaaagtttataatcttctgataaccaatggctttcttgatgt 21982098  T

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Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 232
Target Start/End: Complemental strand, 21998682 - 21998584
Alignment:
Q  134 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgt 232  Q
    |||| ||||| ||||| ||||| || |||||||| || || || || ||||| ||| |||||||| | ||||||||||||||||| ||  |||||||||    
T  21998682 ccttataatgggctttggtatcatcctcataaattcttcagctactcaccaactcaaaaaagtttataatcttctgataaccaatggctttcttgatgt 21998584  T

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Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 170
Target Start/End: Complemental strand, 22117478 - 22117384
Alignment:
Q  76 ggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcct 170  Q
    |||||||| ||||||||   |||||| || |||||||||||  | | |||| |||  |||||||| ||||| ||||||||||||||||| |||||    
T  22117478 ggggcactgtacggcttaggacgactttgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcct 22117384  T

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Target: chr1 (Bit Score: 138; Significance: 3e-72; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 22015749 - 22015520
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||||||||  ||||||||||||||| |||| |||||| |||||||||| | ||| | |||||| ||||||||||| |||||||||||||||  |||||    
T  22015749 caaacaatatttgtaggagcatctctcttctttggcctcctctcatcatttattctcttcttacccttgtcagcaggagcactatacggcttcggacgac 22015650  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| || |||||||||||||||||||||||||||||||||||| | |||||||| |||||||| ||||||||||| ||||| ||||||||    
T  22015649 tctgctgtccctttcccctacgctcactcatcaccttgtaatgagctttcgtaacttcttcatagatcctacagctgcttaccaaatcagagaagtttct 22015550  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    ||| ||||||||||||||||||||||||||    
T  22015549 tattttctgataaccaatagccctcttgat 22015520  T

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Target: chr1; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 21739040 - 21738811
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||| ||| |||||||||||| |||||||||| |||||| |||||||||||||||| |||||||| ||||||||| |||| ||||| ||||||  |||||    
T  21739040 caaataatctcagtaggagcacctctcctcttaggcctcctctcatcattcaatctctgcttacccttgtcagcatgggcgctatatggcttcggacgac 21738941  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| || || ||||||||||||||||| || ||    
T  21738940 tctgttgtcccttacctctgcggtcactcatcaccttgtaatgagctttcgtatcctcttcatatatcctgcagctacttaccaattcagaaaaattcct 21738841  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    || ||| ||||| |||||||||||||||||    
T  21738840 taccttttgatagccaatagccctcttgat 21738811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 21742556 - 21742327
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||| ||| ||||||||||||||||||||||| |||||| |||||||||||| ||| |||||||| ||||||| ||| ||||||||||| |||  |||||    
T  21742556 caaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagtctctgcttacccttgtcagtaggagcactatacggtttcggacgac 21742457  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||  |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| || || || ||||| ||||| ||  ||||    
T  21742456 tctactgtcccttacctctgcgctcactcatcaccttgtaatgagctttcgtatcctcttcatatatcctgcagctactcaccaactcagagaaaattct 21742357  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    |||||||| |||||||||||||||||||||    
T  21742356 tatcttctcataaccaatagccctcttgat 21742327  T

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Target: chr1; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 19857660 - 19857892
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| || |||| ||||||||||||||| |||||| ||||||||||||| || |||||||| ||||||||||| |||||||| || ||   |||||    
T  19857660 caaacaatctcggtagaagcatctctcctcttaggcctcctctcatcattcaacctctgcttacccttgtcagcaggagcactatatggtttaggacgac 19857759  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| ||||| || ||||||||||||||||||||||| || |||||||||||||| ||| |||| ||||||||||| ||||||||||||||    
T  19857760 tctgttgtcccttacctctgcgttcactcatcaccttgtaatgagccttagtatcctcttcatagatcttacagctgcttaccaactcagaaaagtttct 19857859  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     ||||||||||| ||||| || |||||||||||    
T  19857860 aatcttctgatagccaatggctctcttgatgtc 19857892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 20832904 - 20832673
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||||||||||  ||||||||||||||||||||| ||| ||||||||||||  || ||||| || ||||||||||| |||||||| |  ||   |||||    
T  20832904 caaacaatatcaacaggagcatctctcctcttgggtctcctctcatcattcagcctctgctttcccttgtcagcaggagcactatatgt-ttaggacgac 20832806  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||| || ||||| ||||| ||||| |  |||||||||||    
T  20832805 tctgctgtcccttgcctctacggtcactcatcaccttgtaatgagctttcgtatcttattcatagattctacagctgctcaccaacttcgaaaagtttct 20832706  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     || ||||| || ||||||||||||||||||||    
T  20832705 aattttctggtatccaatagccctcttgatgtc 20832673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 24096619 - 24096390
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||  ||||||||||||||||||||||||| ||||||||||||  || || || || ||||||||||| |||||||| || ||   |||||    
T  24096619 caaacaatctcaacaggagcatctctcctcttgggcctcctctcatcattcatcctctgttttcctttgtcagcaggagcactataaggtttaggacgac 24096520  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| | ||| ||||||||| ||||||||||||||||||| || || || ||||| ||||| || ||||| ||||| ||||| ||  ||||    
T  24096519 tctgttgtcccttacttcttcgctcactcgtcaccttgtaatgagctttggtgtcttcctcatatatcctgcagctgctcaccaactcagagaaaattct 24096420  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
     ||||||||||| |||||||| || |||||    
T  24096419 aatcttctgatacccaatagctcttttgat 24096390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 31537001 - 31536769
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| ||||||||||||||||||||| ||| | ||||||||||  || ||||| || ||||||||||| |||||||| |||||   ||||     
T  31537001 caaacaatctcagaaggagcatctctcctcttgggtctcctatcatcattcatcctctgctttcctttgtcagcaggagcactataaggcttaggacgat 31536902  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| || || | ||||||||| | ||||||||||||||| || || ||||||||||| ||||| ||| ||||||| ||||| |||  |||    
T  31536901 tctgctgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcataaattctacatctgtttaccaactcagagaagactct 31536802  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     |||| |||||| |||||||| || ||||||||    
T  31536801 gatctgctgatacccaatagctcttttgatgtc 31536769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 38909830 - 38909598
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||  ||||||||||||||||||||||||| | ||||||  ||  || ||||| || ||||||||||| ||||| || || ||   ||||     
T  38909830 caaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcctctgctttcctttgtcagcaggagcactgtaaggtttaggacgat 38909731  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| || || | | ||||||| | ||||||||||||||| || || ||||||||||| ||||| ||| ||||||| ||||| |||  |||    
T  38909730 tctgttgtcccttacccctcctcccactcattatcttgtaatgagctttggtgtcttcttcataaattctacatctgtttaccaactcagagaagactct 38909631  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     |||| |||||| |||||||| || ||||||||    
T  38909630 gatctgctgatacccaatagctcttttgatgtc 38909598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 21961413 - 21961631
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| ||||||||||||||||||||| ||| | ||||||||||   | ||||| || ||||||| ||| ||||| || |||||   ||||     
T  21961413 caaacaatctcagaaggagcatctctcctcttgggtctcctatcatcattcatcttctgctttcctttgtcagaaggagcactgtaaggcttaggacgat 21961512  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| ||||| | ||||||||| | ||||||||||||||| || || |||||||||||  | || ||| ||||||||||||| |||  |||    
T  21961513 tctgctgtcccttacctctcctctcactcattatcttgtaatgagctttggtgtcttcttcataaattatgcatctgtttaccaattcagagaagactct 21961612  T
Q  201 tatcttctgataaccaata 219  Q
     |||| |||||| ||||||    
T  21961613 gatctgctgatacccaata 21961631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 18273153 - 18273346
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| ||||||||| ||||||| ||||| || ||| |||||||||||||||| ||||  || |||||| |||| ||||| || ||||||  |||||    
T  18273153 caaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctttgctcccctttgtcaacaggagcactgtagggcttcggacgac 18273252  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaa 194  Q
      || || ||||||   || ||||||||| | ||||| |||||||| ||||||||||| |||||||| ||||| || || ||||||||||||||    
T  18273253 cttgctgacccttgttcctccgctcactcctaaccttataatgagccttcgtatcctcctcataaattctacagctactcaccaattcagaaaa 18273346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 52989127 - 52989358
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| |||||||||||||||||| |||||| | ||||||||||   | ||||| || ||||||||||| ||||| || |||||   ||||     
T  52989127 caaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattcatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgat 52989226  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    | || |||||||| || || | ||||||||| |  |||||||||||||| || || ||||||||||| ||||| ||| | ||||| ||||| |||  |||    
T  52989227 tttgctgtcccttacccctcctctcactcatta-tttgtaatgagctttggtgtcttcttcataaattctacacctgttaaccaactcagagaagactct 52989325  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     |||| |||||| |||||||| || ||||||||    
T  52989326 gatctgctgatacccaatagctcttttgatgtc 52989358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 227
Target Start/End: Original strand, 16379482 - 16379675
Alignment:
Q  34 ggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatca 133  Q
    |||||| |||||||||| | ||| || || || || ||||||| |||||| || |||||   |||||||||||| ||||||||| | |||||| |||  |    
T  16379482 ggcctcctctcatcattaactctctgtttgcccttatcagcagaggcactgtaaggcttaggacgactctgttgacccttgcctttccgctcattcacaa 16379581  T
Q  134 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctctt 227  Q
    ||||||||||||| || |||||||| ||||||||||| || ||||| ||||  |||||||| || |  |||||||  |||||||| ||||||||    
T  16379582 ccttgtaatgagccttagtatcctcctcataaatcctgcatctgctcaccagctcagaaaaattacggatcttctagtaaccaattgccctctt 16379675  T

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Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 48426259 - 48426491
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||  ||||||||||||||||||||||||| | ||||||  ||   | ||||| || ||||||||||| ||||| || |||||   ||||     
T  48426259 caaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgat 48426358  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| || || | ||||||||| | ||||||||||||||| || || |||||||| || || || ||  | ||||| ||||| |||  |||    
T  48426359 tctgttgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcatagattctgcacctattaaccaactcagagaagactct 48426458  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     |||| |||||| |||||||| || ||||||||    
T  48426459 gatctgctgatacccaatagctcttttgatgtc 48426491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 20297769 - 20297962
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| ||||||||||||||||||||||||| | ||||||  ||   | || || || ||||||| ||| ||||| || |||||   ||||     
T  20297769 caaacaatctcagcaggagcatctctcctcttgggcctcctgtcatcacccatcttctgttttcccttgtcagtaggagcactgtaaggcttaggacgat 20297868  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaa 194  Q
    |||| |||||||| || || | ||||||||| | ||||||||||||||| || || ||||||||||| ||||| ||| | ||||| ||||||||    
T  20297869 tctgatgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcataaattctacacctgttaaccaactcagaaaa 20297962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 233
Target Start/End: Complemental strand, 20074710 - 20074481
Alignment:
Q  4 acaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactct 103  Q
    ||||| ||||| |||||||||||||||||  ||||| | |||||| |||   | ||||| || ||||||||||  ||||| || |||||   |||| |||    
T  20074710 acaatctcagtgggagcatctctcctcttaagcctcctgtcatcactcatcttctgctttcctttgtcagcagaagcactgtaaggcttaggacgattct 20074611  T
Q  104 gttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttat 203  Q
    | |||||||| || || | ||||||||| | ||||||||||||||| || || ||||||||||| |||||  || | ||||| ||||| |||  ||| ||    
T  20074610 gctgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcataaattctacacatgttaaccaactcagagaagaatctgat 20074511  T
Q  204 cttctgataaccaatagccctcttgatgtc 233  Q
    || || ||| |||||||| || ||||||||    
T  20074510 ctgctaatacccaatagctcttttgatgtc 20074481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 233
Target Start/End: Complemental strand, 20853638 - 20853532
Alignment:
Q  127 ctcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctct 226  Q
    ||||||||||| |||||||| || |||||||| |||||||| ||||| || || |||||||| || ||  |||| ||||||||||| ||||| || ||||    
T  20853638 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaattctgagaaaattctgatcttctgatatccaatggctctct 20853539  T
Q  227 tgatgtc 233  Q
    |||||||    
T  20853538 tgatgtc 20853532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 37680435 - 37680667
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||  ||||| ||||||||||||||||||| | ||||||  ||   | ||||| || ||||||| ||| ||||| || |||||   ||||     
T  37680435 caaacaatctcaacaggagtatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagtaggagcactgtaaggcttaggacgat 37680534  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| || || | ||||||||| | ||||||||||||||| || || |||||||| || || || ||  | ||||| ||| | |||  |||    
T  37680535 tctgttgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcatagattctgcacctattaaccaactcaaagaagactct 37680634  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     |||| |||||| |||||||| || ||||||||    
T  37680635 gatctgctgatacccaatagctcttttgatgtc 37680667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 170
Target Start/End: Complemental strand, 16347542 - 16347433
Alignment:
Q  61 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 160  Q
    ||||| |||||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| |||||||||||||    
T  16347542 ttacccttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctctt 16347443  T
Q  161 cataaatcct 170  Q
    | || |||||    
T  16347442 cgtagatcct 16347433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 170
Target Start/End: Complemental strand, 16354190 - 16354081
Alignment:
Q  61 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 160  Q
    ||||| |||||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| |||||||||||||    
T  16354190 ttacccttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctctt 16354091  T
Q  161 cataaatcct 170  Q
    | || |||||    
T  16354090 cgtagatcct 16354081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 170
Target Start/End: Complemental strand, 51330430 - 51330330
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 169  Q
    |||||||||||||| ||||||||   ||||||||| |||||||| ||  | | |||| |||  |||||||| ||||| ||||||||||||||||| ||||    
T  51330430 tcagcaggggcactgtacggcttaggacgactctgctgtcccttacccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcc 51330331  T
Q  170 t 170  Q
    |    
T  51330330 t 51330330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 230
Target Start/End: Original strand, 20921929 - 20922023
Alignment:
Q  136 ttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    |||||||| ||||| |||||||||||||| || || |||||||| || | ||||| |||||| |  ||||||||||| ||||| |||| ||||||    
T  20921929 ttgtaatgtgctttggtatcctcttcatagattctgcaactgctcactagttcagtaaagttacggatcttctgatatccaattgcccgcttgat 20922023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 218
Target Start/End: Complemental strand, 21045118 - 21044941
Alignment:
Q  41 tctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgta 140  Q
    |||||||||| | ||| ||||| || || |||||||| ||||| || |||||   |||||| || || ||||||||| | | || | |||  ||||||||    
T  21045118 tctcatcattaactctttgcttgcccttatcagcaggagcactgtaaggctttggacgactttgctgacccttgcctttcctcttattcacaaccttgta 21045019  T
Q  141 atgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaat 218  Q
    |||||| || ||||| || ||||| || || |||||||| ||||  ||||||||||| |  |||||||| ||||||||    
T  21045018 atgagccttagtatcttcctcatatattctgcaactgctcaccagctcagaaaagttacggatcttctgttaaccaat 21044941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 170
Target Start/End: Original strand, 21833723 - 21833823
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 169  Q
    ||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| |||||||||||| |||| ||||    
T  21833723 tcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctctccatagatcc 21833822  T
Q  170 t 170  Q
    |    
T  21833823 t 21833823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 164
Target Start/End: Complemental strand, 41350615 - 41350512
Alignment:
Q  61 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 160  Q
    ||||| |||||||| |||||||| ||||||||   ||||||||| |||||||| ||  | | |||| |||  |||||||| | ||| |||||||||||||    
T  41350615 ttacccttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttacccttcctctcattcactaccttgtagtaagccttcgtatcctctt 41350516  T
Q  161 cata 164  Q
    ||||    
T  41350515 cata 41350512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 116
Target Start/End: Original strand, 19109791 - 19109837
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcc 116  Q
    |||||||||||||| ||||||||   |||||||||||||||||||||    
T  19109791 tcagcaggggcactgtacggcttaggacgactctgttgtcccttgcc 19109837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 230
Target Start/End: Original strand, 22117102 - 22117298
Alignment:
Q  34 ggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatca 133  Q
    |||||| |||||||||| | ||| || || || || ||||||||  |||| || |||||   |||||| || || ||||||||| | | |||| |||  |    
T  22117102 ggcctcctctcatcattaactctttgttttcccttatcagcaggaacactgtaaggctttggacgactttgctgacccttgcctttcctctcattcaaaa 22117201  T
Q  134 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    ||||||||||||| || ||||| || || || || || |||||||| ||||  ||||||||||| |  |||||||  |||||||| |||| ||||||    
T  22117202 ccttgtaatgagccttagtatcttcctcgtatattctgcaactgctcaccagctcagaaaagttacggatcttcttgtaaccaattgcccgcttgat 22117298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 10 - 230
Target Start/End: Original strand, 43076 - 43296
Alignment:
Q  10 tcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtc 109  Q
    ||||||||||||||||||||||| |||||| ||||||||||||| || || ||||| |||||||||||||||||||||||||||  ||||||||  ||||    
T  43076 tcagtaggagcatctctcctcttaggcctcctctcatcattcaacctctgtttacccttgtcagcaggggcactatacggcttcggacgactctactgtc 43175  T
Q  110 ccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctg 209  Q
    |||||||||  |||| |||||||||||||||||||||||| |||||||| ||||| ||| |||| ||||||||||| ||||| ||||||||||| |||||    
T  43176 ccttgcctcggcgcttactcatcaccttgtaatgagcttttgtatcctcatcatagatcttacagctgcttaccaaatcagagaagtttcttattttctg 43275  T
Q  210 ataaccaatagccctcttgat 230  Q
    |||||||||||||||||||||    
T  43276 ataaccaatagccctcttgat 43296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 4239 - 4010
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||| ||| ||||||||||||||||||||||| |||||| ||||||||||||| || || ||||| ||||||||||| ||||||||||| |||  |||||    
T  4239 caaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcaacctctgtttacctttgtcagcaggagcactatacggtttcggacgac 4140  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||  |||||||| ||||| |||||||||||||| || ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||| ||    
T  4139 tctactgtcccttacctctgcgctcactcatcactttataatgagcttttgtatcctcttcatagatcctacaactacttaccaattcagaaaagttcct 4040  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    |||||| ||||||||||||||||| |||||    
T  4039 tatcttttgataaccaatagcccttttgat 4010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 17006 - 17235
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||| ||| ||||||||||||||||||||||| |||||| |||||||||||| | | |||||||| ||||| ||||| |||||||||||||||  |||||    
T  17006 caaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagtttctgcttacccttgtcggcaggagcactatacggcttcggacgac 17105  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||| |||| ||||||||| || ||||| |||||||||||||||||||| || ||    
T  17106 tctgttgtcccttgcctttgcgctcactcatcaccttgtaatgagctttggtattctcttcatatattctacatctgcttaccaattcagaaaaattcct 17205  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    |||||  ||||| |||||||||||||||||    
T  17206 tatctattgatagccaatagccctcttgat 17235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 37308 - 37540
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||| ||||||||||||||  |||||||||||||||||| |||||||||||||||| |||||||| ||||| ||| | |||||||||||||||  |||||    
T  37308 caaaaaatatcagtaggagtgtctctcctcttgggcctcctctcatcattcaatctctgcttacccttgtcggcaagagcactatacggcttcggacgac 37407  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||| ||  ||| ||||||||||    
T  37408 tctgctgtcccttacctctacgttcactcatcaccttgtaatgagctttcgtatcttcttcatagatcctacagctgcttaacagctcataaaagtttct 37507  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     || |||||||| |||||||| |||||||||||    
T  37508 aattttctgatatccaatagctctcttgatgtc 37540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 63454 - 63245
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||                    ||    
T  63454 caaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattcaatctttgcttacccttgtcagcaggg--------------------ac 63375  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  63374 tctgctgtaccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacagctacttaccaattcagaaaagtttct 63275  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    |||||||| |||||||||||||||||||||    
T  63274 tatcttctcataaccaatagccctcttgat 63245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 153861 - 154093
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| ||||| |||||||||||||||||||||||| |||||||||||| ||  |||||||| ||||||||||| |||||||| ||||||  |||||    
T  153861 caaacaatctcagtgggagcatctctcctcttgggcctcctctcatcattcagtcgctgcttacccttgtcagcaggagcactatatggcttcggacgac 153960  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| |||||  | |||| |||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||| ||||| ||||||||    
T  153961 tctgctgtcccttacctctttgttcacccatcaccttgtaatgagctttcgtctcctcctcataaatcctacagctgcttaccaactcagagaagtttct 154060  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     ||||||||||||||||| || |||||||||||    
T  154061 aatcttctgataaccaatggctctcttgatgtc 154093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 34706 - 34935
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||| || || |||||||| ||||||||||| ||||||||| |||||  |||||    
T  34706 caaacaatgtcagtaggagcatctctcctcttgggcctcctctcatcatttaacctttgcttacccttgtcagcaggagcactatacagcttcggacgac 34805  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||||||||| || |||||||||||||||||||||||||| || ||||| ||||||||||| || || |||||||| ||||| ||||||||    
T  34806 tctgctgtcccttgcctctgcgttcactcatcaccttgtaatgagcttttgtgtcctcctcataaatcctgcagctacttaccaaatcagagaagtttct 34905  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    ||| |||| ||||||||| || ||||||||    
T  34906 tattttctaataaccaatggcactcttgat 34935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 6174 - 6405
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||||| ||||||||||||||||||||||| |||||||||| || || |||||||| ||||||| ||| |||||||||||||||  |||||    
T  6174 caaacaatgtcagtaagagcatctctcctcttgggcctcctctcatcatttaacct-tgcttacccttgtcagtaggagcactatacggcttcggacgac 6272  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||||||||| || ||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||| |||||||| | ||||| ||    
T  6273 tctgctgtcccttgcctctgcgttcactcatcaccttgtaatgagctttcgtgtcctcctcataaatcctacagctgcttcccaattcaaagaagttcct 6372  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
    ||| |||||||| ||||| || |||||||||||    
T  6373 tattttctgatagccaatggctctcttgatgtc 6405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 10 - 230
Target Start/End: Original strand, 5818 - 6035
Alignment:
Q  10 tcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtc 109  Q
    |||||||||||||||||||||||  ||||| |||||||||||||||| |||||||| ||||||||||||   ||||||||||||  |||||| |||||||    
T  5818 tcagtaggagcatctctcctcttaagcctcctctcatcattcaatctctgcttacccttgtcagcaggg---ctatacggcttcggacgactatgttgtc 5914  T
Q  110 ccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctg 209  Q
    |||| ||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||| || || |||||||||||||| || || |||||||| ||    
T  5915 ccttacctctgcgctcactcatcaccttgtaataagctttcgtatcctcttcatatatcctgcagctacttaccaattcagagaaattccttatcttttg 6014  T
Q  210 ataaccaatagccctcttgat 230  Q
    ||| |||||||||||||||||    
T  6015 atagccaatagccctcttgat 6035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 195
Target Start/End: Complemental strand, 11660 - 11484
Alignment:
Q  19 gcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctc 118  Q
    |||||||||||||||||| || | ||||||  ||   | ||||| || ||||||||| | ||| | || |||||   |||| ||||||||||||| || |    
T  11660 gcatctctcctcttgggcttcctatcatcacccatcttctgctttcctttgtcagcaagagcaatgtaaggcttaggacgattctgttgtcccttacccc 11561  T
Q  119 tacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaag 195  Q
    | | ||||||||| | ||||||||||||||| || || ||||||||||||||||| ||| | ||||| || ||||||    
T  11560 tcctctcactcattatcttgtaatgagctttggtgtcttcttcataaatcctacacctgttaaccaactccgaaaag 11484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 477 - 245
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||||||  |||||||||||||||||||||||||  |||||||||| || || |||||||| ||||||| ||| |||||||||||||||  |||||    
T  477 caaacaatatctataggagcatctctcctcttgggccttctctcatcatttaacctctgcttacccttgtcagaaggagcactatacggcttcggacgac 378  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    | || |||||||| |||||||| | ||||||||||||||||||||||||| | ||||| ||||||||||| |||||||||||||| ||||| |||||| |    
T  377 tgtgctgtcccttacctctacgtttactcatcaccttgtaatgagctttcctgtcctcctcataaatcctgcaactgcttaccaaatcagagaagttttt 278  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     ||||||||||||||||| || |||||||||||    
T  277 aatcttctgataaccaatggctctcttgatgtc 245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 18797894 - 18798126
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||||||   ||||||||| ||||||||||||||| |||||||||||||||| ||||| || ||||||||||| |||||||||||||||  |||||    
T  18797894 caaacaatatccacaggagcatccctcctcttgggcctcctctcatcattcaatctttgctttcccttgtcagcaggagcactatacggcttcggacgac 18797993  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||||||||| || |||||||||||||||||||||||||  || ||||||||||| || || || || |||||||| ||||| ||||||||    
T  18797994 tctgctgtcccttgcctctgcggtcactcatcaccttgtaatgagcttctgtgtcctcttcatagattctgcagctacttaccaactcagagaagtttct 18798093  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     |||||||| || ||||||||||||||||||||    
T  18798094 gatcttctggtatccaatagccctcttgatgtc 18798126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 19438215 - 19438438
Alignment:
Q  10 tcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtc 109  Q
    |||| ||||||||||||||||||||||||| |||||||||| || || |||||||| ||||||||||| |||||||| ||||||  ||||||||| ||||    
T  19438215 tcagcaggagcatctctcctcttgggcctcctctcatcatttaacctctgcttacccttgtcagcaggagcactatatggcttcggacgactctgctgtc 19438314  T
Q  110 ccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctg 209  Q
    |||| ||||| |  |||||||  |||||||||| ||| ||||||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||    
T  19438315 ccttacctctcctttcactcactaccttgtaataagccttcgtatcctcttcatagatcctacagctgcttaccaactcagaaaagtttctgatcttctg 19438414  T
Q  210 ataaccaatagccctcttgatgtc 233  Q
    ||| ||||| || |||||||||||    
T  19438415 atacccaatggctctcttgatgtc 19438438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 4 - 223
Target Start/End: Original strand, 25771051 - 25771270
Alignment:
Q  4 acaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactct 103  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||||||||  || || ||||| ||||||||||| ||||||||||| | |  ||||||||    
T  25771051 acaatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcaggagcactatacggttacggacgactct 25771150  T
Q  104 gttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttat 203  Q
    |||||||||| ||||| ||||||||||||||  | ||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||| || |||||    
T  25771151 gttgtcccttacctctgcgctcactcatcactctataatgagcttttgtatcctcttcataaatcctacagctgcttaccaactcagaaaaattccttat 25771250  T
Q  204 cttctgataaccaatagccc 223  Q
    ||| || || ||||||||||    
T  25771251 cttttggtagccaatagccc 25771270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 14376993 - 14376761
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||||| ||||  ||||||||||||||| ||||| ||| ||||||||||||| || || || || ||||||||||| |||||||||||||||  |||||    
T  14376993 caaacaacatcaacaggagcatctctcctattgggtctcctctcatcattcaacctctgttttcccttgtcagcaggagcactatacggcttcggacgac 14376894  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| ||||||||||  || || ||||||||||||||||||||||||||||| ||||| ||||| ||||| || || || ||||||||||| ||||||||    
T  14376893 tctgctgtcccttgctccttcgatcactcatcaccttgtaatgagctttcgtgtcctcctcatagatcctgcagctactaaccaattcagagaagtttct 14376794  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     ||||||||||| |||||  | |||||||||||    
T  14376793 gatcttctgatacccaatgtctctcttgatgtc 14376761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 21567068 - 21566839
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||| || |||| ||||||||||||||||||||||||  |||||||||||| ||  ||||| || ||||||||||||||||| ||||||||   |||||    
T  21567068 caaactatttcagcaggagcatctctcctcttgggccttctctcatcattcagtcgttgctttcccttgtcagcaggggcactgtacggcttaggacgac 21566969  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| |  || ||||||||||||||||||||||||||||| | ||| || ||||| || ||||| ||||||||||| ||||||||  | ||    
T  21566968 tctgttgtcccttactcctccgctcactcatcaccttgtaatgagcttttgaatcttcctcatagattctacagctgcttaccaactcagaaaaagtcct 21566869  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
     ||||||||||| ||||| |||||||||||    
T  21566868 gatcttctgatagccaatggccctcttgat 21566839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 19456227 - 19456456
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||||||||  || || || || ||||||||||| |||||||| || ||   |||||    
T  19456227 caaacaatctcagtaggagtatctctcctcttgggcctcctctcatcattcagcctttgttttcctttgtcagcaggagcactatatggtttaggacgac 19456326  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| ||||| || ||||||| || |||||||||||| || |||||||||||||| ||||| || |||||||| || || || || |||||    
T  19456327 tctgttgtcccttacctctgcgttcactcaccagcttgtaatgagccttagtatcctcttcatatatcctgcagctgcttactaactctgagaaatttct 19456426  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    |||||| ||||| |||||| | ||||||||    
T  19456427 tatcttttgatagccaatacctctcttgat 19456456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 19466372 - 19466601
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||||||||  || || || || ||||||||||| |||||||| || ||   |||||    
T  19466372 caaacaatctcagtaggagtatctctcctcttgggcctcctctcatcattcagcctttgttttcctttgtcagcaggagcactatatggtttaggacgac 19466471  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| ||||| || ||||||| || |||||||||||| || |||||||||||||| ||||| || |||||||| || || || || |||||    
T  19466472 tctgttgtcccttacctctgcgttcactcaccagcttgtaatgagccttagtatcctcttcatatatcctgcagctgcttactaactctgagaaatttct 19466571  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    |||||| ||||| |||||| | ||||||||    
T  19466572 tatcttttgatagccaatacctctcttgat 19466601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 19486371 - 19486149
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| ||||||||| ||||||| ||||| || ||| |||||||||||||||| ||||| || ||||||||||| ||||| || |||||| ||||||    
T  19486371 caaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctttgcttccctttgtcagcaggagcactgtagggcttcgaacgac 19486272  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
      || || || |||   || ||||||||||| ||||||||||||||||| ||||||||||| || || ||||||||||| |||||||||||||| |  ||    
T  19486271 cttgctggcctttgttcctccgctcactcataaccttgtaatgagctttggtatcctcttcgtagattctacaactgctcaccaattcagaaaattgcct 19486172  T
Q  201 tatcttctgataaccaatagccc 223  Q
     ||||||||||||||||| ||||    
T  19486171 aatcttctgataaccaatggccc 19486149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 24515491 - 24515337
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||||||||||  || || || || ||||||||||| |||||||| || ||   |||||    
T  24515491 caaacaatatcaacaggagcatctctcctcttgggcctcctctcatcattcagcctctgttttcccttgtcagcaggagcactatatggtttaggacgac 24515392  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatc 155  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  24515391 tctgttgtcccttgcctctgcggtcactcatcaccttgtaatgagctttcgtatc 24515337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 21474804 - 21475010
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| ||||||||||||||||||||| | |||||| ||||||||||||   | |||||||| ||||||||||| |||||||||||||||  |||||    
T  21474804 caaacaatctcagtaggagcatctctcctcctaggcctcctctcatcattcagcatctgcttacccttgtcagcaggagcactatacggcttcggacgac 21474903  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||                ||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| || ||    
T  21474904 tctg----------------cgctcactcatcaccttataatgagcttttgtatcctcttcataaatcctacagctgcttaccaattcagaaaaattcct 21474987  T
Q  201 tatcttctgataaccaatagccc 223  Q
    |||||| |  || ||||||||||    
T  21474988 tatcttttagtagccaatagccc 21475010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 230
Target Start/End: Complemental strand, 10465922 - 10465696
Alignment:
Q  4 acaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactct 103  Q
    ||||| |||| |||| |||||||||||||||||||| | |||||||||| | | ||||| || ||||||||| | ||| | || |||||   ||||||||    
T  10465922 acaatctcagcaggaacatctctcctcttgggcctcctatcatcattcattttctgctttcccttgtcagcaagagcattgtaaggcttaggacgactct 10465823  T
Q  104 gttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttat 203  Q
    | |||||||| || || | ||||||||||||||||||||||||||| || || || ||||| ||||| || ||||| ||||| ||||| ||   ||| ||    
T  10465822 gctgtcccttacccctcctctcactcatcaccttgtaatgagcttttgtgtcttcctcatatatcctgcagctgctcaccaactcagagaaaactctaat 10465723  T
Q  204 cttctgataaccaatagccctcttgat 230  Q
    ||||||||| || ||||||||||||||    
T  10465722 cttctgataccctatagccctcttgat 10465696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 34642592 - 34642430
Alignment:
Q  71 cagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcct 170  Q
    ||||||| ||||||||||||||   ||||||||||||||||||||| || || |||||||||||||||||||||||  | | ||| |||||||| || ||    
T  34642592 cagcaggagcactatacggcttaggacgactctgttgtcccttgcccctccgttcactcatcaccttgtaatgagcccttgaatcttcttcatagattct 34642493  T
Q  171 acaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 233  Q
     || || |||| ||| |||||||   |||| ||||| ||||| ||||| ||||||||||||||    
T  34642492 gcagctacttatcaactcagaaagagttctgatcttttgatagccaatggccctcttgatgtc 34642430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 8720782 - 8720553
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||  |||| ||||||||||||| |||||| ||||||||||||||||| | |  || ||||   |||| ||||| || || |||  |||||    
T  8720782 caaacaatctcatcaggatcatctctcctcttaggcctcctctcatcattcaatctaggttcccctttgtttacaggagcactgtagggtttcggacgac 8720683  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
      ||||| ||||||   || |||||  || | | |||||| |||||||| |||||||| ||||| |||||||| || || ||||| || |||||||| ||    
T  8720682 cttgttgacccttgttcctccgctcgttcctaatcttgtagtgagctttggtatcctcctcatatatcctacagctactcaccaactcggaaaagttcct 8720583  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    |||||||||||||||||||||||| |||||    
T  8720582 tatcttctgataaccaatagcccttttgat 8720553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 233
Target Start/End: Original strand, 15462662 - 15462772
Alignment:
Q  123 ctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagcc 222  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| || || ||||| || || ||  | || ||||||||||| ||||| ||     
T  15462662 ctcactcatcaccttgtaatgagctttcgtatcctcctcataaatcctacagctactcaccaactccgagaaaatcctgatcttctgatatccaatggct 15462761  T
Q  223 ctcttgatgtc 233  Q
    |||||||||||    
T  15462762 ctcttgatgtc 15462772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 16813844 - 16814073
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| |||| ||||||||||||| || ||| |||||||||||||||| || |  || ||||   |||| ||||| || || |||  |||||    
T  16813844 caaacaatctcagcaggatcatctctcctcttaggtctcctctcatcattcaatctctgttcccctttgtttacaggagcactgtagggtttcggacgac 16813943  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
      ||||| ||||||   || |||||| || | | ||| || |||||||| |||||||| ||||| ||| |  | || || ||||| || |||||||||||    
T  16813944 cttgttgacccttgttcctccgctcattcctaatcttatagtgagctttggtatcctcctcatatatcatgtagctactcaccaactcggaaaagtttct 16814043  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    ||||||||||||||||||||||||||||||    
T  16814044 tatcttctgataaccaatagccctcttgat 16814073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 230
Target Start/End: Original strand, 19881640 - 19881829
Alignment:
Q  41 tctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgta 140  Q
    |||||||||||| ||  ||||| || ||  |||||||||| || ||||||||   |||||| |||||| ||||||| || || |||||||||||||||||    
T  19881640 tctcatcattcagtcgttgctttcccttaccagcaggggcgctgtacggcttaggacgactttgttgttccttgcccctccgttcactcatcaccttgta 19881739  T
Q  141 atgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    |||||| || | ||| |||||||| || || || || |||| ||| || ||||   |||| ||||||||||||||||| |||||||||||    
T  19881740 atgagcctttgaatcttcttcatagattctgcagctacttatcaactcggaaagagttctgatcttctgataaccaatggccctcttgat 19881829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 18660123 - 18660352
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||  |||||||||   ||| |||||||||| | | |||||||||| |  || |||| ||| || |||||||| ||||| || |||||   |||||    
T  18660123 caaacaacttcagtaggattctctttcctcttgggtcccctctcatcattaaccctctgctcacccttatcagcaggagcactgtaaggctttggacgac 18660222  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    | || || | ||| ||| | | ||||||||   ||||||||||||||||||||||||| ||||| || || |||||||| |||| |||||||||||| |     
T  18660223 tttgctgactcttacctttcctctcactcacagccttgtaatgagctttcgtatcctcctcatagattctgcaactgctcaccagttcagaaaagttacg 18660322  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
     ||||||| ||| |||||  ||||||||||    
T  18660323 gatcttctaatatccaatgaccctcttgat 18660352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 70 - 170
Target Start/End: Complemental strand, 5836239 - 5836139
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 169  Q
    |||||||||||||||||||||||   |||||||||||||||||||||  | |||||| |||    |||||| |||||||| ||||||||||| |||||||    
T  5836239 tcagcaggggcactatacggcttaggacgactctgttgtcccttgcccttccgctcattcacagtcttgtagtgagctttggtatcctcttcgtaaatcc 5836140  T
Q  170 t 170  Q
    |    
T  5836139 t 5836139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 233
Target Start/End: Original strand, 24367620 - 24367836
Alignment:
Q  17 gagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcc 116  Q
    ||||||||||||||||||||||| | ||||||  ||   | ||||| || ||||||||||| ||||| || |||||   |||| |||| |||||||| ||    
T  24367620 gagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttacc 24367719  T
Q  117 tctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 216  Q
     || | ||||||||| | ||||||||||||||| || || |||| ||| || ||||| ||| | ||||| ||| | |||  ||| |||| |||||| |||    
T  24367720 cctcctctcactcattatcttgtaatgagctttggtgtcttcttgatagattctacacctgttaaccaactcatagaagactctgatctgctgatatcca 24367819  T
Q  217 atagccctcttgatgtc 233  Q
    || || |||||||||||    
T  24367820 atggctctcttgatgtc 24367836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 233
Target Start/End: Complemental strand, 20010452 - 20010346
Alignment:
Q  127 ctcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctct 226  Q
    ||||||||||| |||||||| || |||||||| |||||||| ||||| || || |||||||| || ||  |||| ||||||||||| ||||| || ||||    
T  20010452 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaattctgagaaaattctgatcttctgatatccaatggctctct 20010353  T
Q  227 tgatgtc 233  Q
    |||||||    
T  20010352 tgatgtc 20010346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 230
Target Start/End: Complemental strand, 30677981 - 30677872
Alignment:
Q  121 cgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatag 220  Q
    ||||||||||| |||||||||| |||||| ||||| || ||||| ||||| |||||||| || ||||||||||| |  |  ||||||||||| ||||| |    
T  30677981 cgctcactcataaccttgtaattagctttggtatcttcctcatagatcctgcaactgctcactaattcagaaaattgacggatcttctgatatccaatgg 30677882  T
Q  221 ccctcttgat 230  Q
    ||| ||||||    
T  30677881 cccgcttgat 30677872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 23081627 - 23081856
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||  |||||||||| || || | |||| | |||||||||| | ||| ||||| || || |||||||  ||||| || |||||   |||||    
T  23081627 caaacaatctcaacaggagcatctttcttcctaggccgcctctcatcattaactctttgctttcctttatcagcagcagcactgtaaggctttggacgac 23081726  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| || || ||| || | |||||| |||  | |||||||||||| || |||||||| |||||||| || |||||||| || |  ||||||||| | |     
T  23081727 tctgctgacctttgactttccgctcattcacaatcttgtaatgagccttagtatcctcctcataaattctgcaactgctcactagctcagaaaaggtacg 23081826  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
     |||||||| |||||||| |||| ||||||    
T  23081827 aatcttctggtaaccaattgcccgcttgat 23081856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 25958830 - 25958636
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| ||||||||||||||||| ||||| || ||| ||||||||| || ||| ||||  || | |||| || | |||||||| |||||   |||||    
T  25958830 caaacaatctcagtaggagcatctctactcttaggtctcctctcatcatccagtctttgctccccttcgtcaacaagagcactataaggctttggacgac 25958731  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaag 195  Q
    | || || || || |||||   |||  |||  | |||||| |||||| | |||||||| ||||||||||| |||||||| ||||  |||||||||    
T  25958730 tttgctgcccttttcctctcttctctttcactatcttgtagtgagctctagtatcctcctcataaatcctgcaactgctcaccagctcagaaaag 25958636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 23084769 - 23084680
Alignment:
Q  134 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccc 223  Q
    |||||||||||||||| ||||| || ||||| || ||||||||||| |||| ||||||||| || |  ||||||| ||| ||||| ||||    
T  23084769 ccttgtaatgagctttagtatcttcctcatagattctacaactgctcaccagttcagaaaaattacggatcttctaatacccaatggccc 23084680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 170
Target Start/End: Complemental strand, 2871813 - 2871713
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 169  Q
    |||||||||||||| ||| ||||   |||||||||||||||||||||  | | |||| |||  | |||||| ||||| || |||||||||||||| ||||    
T  2871813 tcagcaggggcactgtacagcttaggacgactctgttgtcccttgcccttcctctcattcactatcttgtagtgagccttggtatcctcttcatagatcc 2871714  T
Q  170 t 170  Q
    |    
T  2871713 t 2871713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 22437207 - 22437249
Alignment:
Q  135 cttgtaatgagctttcgtatcctcttcataaatcctacaactg 177  Q
    |||||||||||| || |||||||||||||||||||| ||||||    
T  22437207 cttgtaatgagccttggtatcctcttcataaatcctgcaactg 22437249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 116
Target Start/End: Complemental strand, 22829397 - 22829351
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcc 116  Q
    |||||||||||||| ||||||||   |||||||||||||||||||||    
T  22829397 tcagcaggggcactgtacggcttaggacgactctgttgtcccttgcc 22829351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 24515333 - 24515269
Alignment:
Q  169 ctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 233  Q
    ||||| ||||| || || || ||||||||||| || ||||| || ||||||||||||||||||||    
T  24515333 ctacagctgctcactaactccgaaaagtttctaattttctggtatccaatagccctcttgatgtc 24515269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 12330 - 12120
Alignment:
Q  20 catctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctct 119  Q
    |||||||||||||||||||  |||||||||||| ||| |||||||| ||||||||||| ||||| |||||||||  |||||| || | ||||||||||||    
T  12330 catctctcctcttgggcctactctcatcattcagtctctgcttacccttgtcagcaggagcactgtacggcttcggacgactatgctatcccttgcctct 12231  T
Q  120 acgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaata 219  Q
    ||| ||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||| ||||  ||||||||||| ||||||||||||||     
T  12230 acgatcactcatcaccttgtaatgatctttcgtatcctcctcataaatcctacagctgcttaccaaatcagtgaagtttcttattttctgataaccaatg 12131  T
Q  220 gccctcttgat 230  Q
    || ||||||||    
T  12130 gctctcttgat 12120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 20510 - 20300
Alignment:
Q  20 catctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctct 119  Q
    |||||||||||||||||||  |||||||||||| ||| |||||||| ||||||||||| ||||| |||||||||  |||||| || | ||||||||||||    
T  20510 catctctcctcttgggcctactctcatcattcagtctctgcttacccttgtcagcaggagcactgtacggcttcggacgactatgctatcccttgcctct 20411  T
Q  120 acgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaata 219  Q
    ||| ||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||| ||||  ||||||||||| ||||||||||||||     
T  20410 acgatcactcatcaccttgtaatgatctttcgtatcctcctcataaatcctacagctgcttaccaaatcagtgaagtttcttattttctgataaccaatg 20311  T
Q  220 gccctcttgat 230  Q
    || ||||||||    
T  20310 gctctcttgat 20300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 807 - 575
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||||||  |||||||||||||||||||||||||| |||||||||||| ||  |||||||| ||||||||||| | |||||| ||||||  |||||    
T  807 caaacaatatccataggagcatctctcctcttgggcctcctctcatcattcagtcgctgcttacccttgtcagcaggagtactatatggcttcggacgac 708  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| |||||||  |||||||||||||||||||||| |||||| ||||| |||||||||||||| ||| ||||||||| ||| ||||| ||    
T  707 tctgttgtcccttacctctacattcactcatcaccttgtaatgagatttcgtgtcctcctcataaatcctacagctggttaccaatttagagaagttcct 608  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
    |||  ||||||| ||||| || |||||||||||    
T  607 tattctctgatagccaatggctctcttgatgtc 575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 121; Significance: 4e-62; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 98518 - 98286
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||| || |||| |||||||||||||| |||||||||| |||||||||| || || |||||||| ||||||||| | |||||||| ||||||  |||||    
T  98518 caaacgatctcagcaggagcatctctccacttgggcctcctctcatcatttaacctctgcttacccttgtcagcatgagcactatatggcttcggacgac 98419  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| ||||| |  |||||||| |||||||||||||| ||||||||||||||||  |||||||| ||||||||||| ||||||||||||||    
T  98418 tctgttgtcccttacctctcctttcactcattaccttgtaatgagccttcgtatcctcttcattgatcctacagctgcttaccaactcagaaaagtttct 98319  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     ||||||||||| ||||| || |||||||||||    
T  98318 gatcttctgatacccaatggctctcttgatgtc 98286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 4 - 223
Target Start/End: Original strand, 176359 - 176578
Alignment:
Q  4 acaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactct 103  Q
    ||||| || |||||||||||||||||| | |||||| |||||||||||| ||| || ||| | ||||  ||||| ||||||||||| |||  ||||||||    
T  176359 acaatctctgtaggagcatctctcctcctaggcctcctctcatcattcagtctctgtttaactttgttggcaggagcactatacggtttcggacgactct 176458  T
Q  104 gttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttat 203  Q
    | |||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| || || ||||| ||| ||||||| |||||    
T  176459 gctgtcccttacctctacgctcactcatcaccttataatgagcttttgtatcctcttcatagatcctacagctactcaccaaatcataaaagttccttat 176558  T
Q  204 cttctgataaccaatagccc 223  Q
    ||| || || ||||| ||||    
T  176559 cttttggtagccaatggccc 176578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 233
Target Start/End: Complemental strand, 738 - 518
Alignment:
Q  13 gtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtccct 112  Q
    ||||||||||||||||||||||||||| |||||||||| || || ||||| || ||||| ||||| |||||||||||||||  |||||| || |||||||    
T  738 gtaggagcatctctcctcttgggcctcctctcatcatttaacctctgcttccccttgtcggcaggagcactatacggcttcggacgactttgctgtccct 639  T
Q  113 tgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 212  Q
    |||||||| | |||||||||||||||||||||||||| ||||| || ||| ||||||| || || |||||||| ||||| ||||||||||| ||||||||    
T  638 tgcctctatgttcactcatcaccttgtaatgagctttggtatcttcctcagaaatcctgcagctacttaccaaatcagagaagtttcttattttctgata 539  T
Q  213 accaatagccctcttgatgtc 233  Q
    |||||| || |||||||||||    
T  538 accaatggctctcttgatgtc 518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 818 - 586
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| || ||||||||||||||||||||||||||| |||||||||| || || | |||||| ||||||||||| ||| |||||||||||  |||||    
T  818 caaacaatctcggtaggagcatctctcctcttgggcctcctctcatcatttaacctcttcttacccttgtcagcaggagcattatacggcttcggacgac 719  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| ||||| || ||||||||||||||||||||||||||  | ||||| ||||||||||| || || |||||||| ||||| || |||||    
T  718 tctgttgtcccttacctctgcgttcactcatcaccttgtaatgagctttgttgtcctcctcataaatcctgcagctacttaccaaatcagagaaatttct 619  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
    | | |||||||||||||| || |||||||||||    
T  618 ttttttctgataaccaatggctctcttgatgtc 586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 10 - 230
Target Start/End: Original strand, 52029 - 52249
Alignment:
Q  10 tcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtc 109  Q
    ||||||||||||||||||||| | |||||| ||||||||||||  || || ||||| ||||||||||| ||||||||| | |||  ||| ||||| ||||    
T  52029 tcagtaggagcatctctcctcctaggcctcctctcatcattcagcctctgtttacctttgtcagcaggagcactatacagtttcggacggctctgctgtc 52128  T
Q  110 ccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctg 209  Q
    |||| ||||| |||||||||||||| || |||||||| || ||||||||||||||||||||||| |||||||||||||||||||  || |||||||| ||    
T  52129 ccttacctctgcgctcactcatcactttataatgagcctttgtatcctcttcataaatcctacagctgcttaccaattcagaaatattccttatcttttg 52228  T
Q  210 ataaccaatagccctcttgat 230  Q
    |||||||||||||| ||||||    
T  52229 ataaccaatagcccgcttgat 52249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 109; Significance: 6e-55; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 8397 - 8165
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||||||||||  | ||||||||||||||||||| ||| ||||||||||||  || ||||| || ||||||||||| |||||||||||||||  |||||    
T  8397 caaacaatatcaacatgagcatctctcctcttgggtctcctctcatcattcagcctctgctttcccttgtcagcaggagcactatacggcttcggacgac 8298  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||||||||||||||| || || ||||||||||||||||||||||||||| | ||||| ||||| || || || |  |||||||||||||| |||||| |    
T  8297 tctgttgtcccttgcccctgcggtcactcatcaccttgtaatgagctttcatgtcctcctcatagattctgcagcaacttaccaattcagagaagttttt 8198  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     ||||||||||| ||||| || |||||||||||    
T  8197 gatcttctgatacccaatggctctcttgatgtc 8165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 18611 - 18379
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||||||||||  | ||||||||||||||||||| ||| ||||||||||||  || ||||| || ||||||||||| |||||||||||||||  |||||    
T  18611 caaacaatatcaacatgagcatctctcctcttgggtctcctctcatcattcagcctctgctttcccttgtcagcaggagcactatacggcttcggacgac 18512  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||||||||||||||| || || ||||||||||||||||||||||||||| | ||||| ||||| || || || |  |||||||||||||| |||||| |    
T  18511 tctgttgtcccttgcccctgcggtcactcatcaccttgtaatgagctttcatgtcctcctcatagattctgcagcaacttaccaattcagagaagttttt 18412  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     ||||||||||| ||||| || |||||||||||    
T  18411 gatcttctgatacccaatggctctcttgatgtc 18379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 109; Significance: 6e-55; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 319612 - 319844
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||||||  ||| ||||||||||||||| ||||||||| ||||||||||||  || |||||| | ||||||||||| |||||||||||||||  |||||    
T  319612 caaacaatcccagcaggagcatctctcctattgggcctcctctcatcattcagcctctgcttatccttgtcagcaggagcactatacggcttcggacgac 319711  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| ||||| ||||| || || ||||| ||||||||||||||||||||||| ||||| |||||||| || || || |||||||||||||| |||||  |    
T  319712 tctgctgtcctttgccccttcgatcacttatcaccttgtaatgagctttcgtgtcctcctcataaattctgcagctacttaccaattcagagaagttctt 319811  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
    |||||||||||| ||||| || |||||||||||    
T  319812 tatcttctgatacccaatggctctcttgatgtc 319844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 326076 - 326151
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcagg 77  Q
    |||||||| |||| ||||||||||||||| || |||||| ||||||||||||  || |||||||| |||| ||||||    
T  326076 caaacaatctcagcaggagcatctctcctatt-ggcctcctctcatcattcagcctctgcttacccttgttagcagg 326151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 2089 - 2317
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||| ||| |||||||||||||||| |||||| |||||| ||||||||||||  || || ||||| ||||||||||  |||||| |||| |||  |||||    
T  2089 caaataatttcagtaggagcatctcacctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcagaagcacta-acggtttcggacgac 2187  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||  | |||||| ||||| |||||||||||||| || ||||||||||| |||||||||||||| || ||||| |||||||| ||||||||||| |||||    
T  2188 tctactatcccttacctctgcgctcactcatcactttataatgagcttttgtatcctcttcatagattctacagctgcttactaattcagaaaaatttct 2287  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    ||||||||||||||||||||||| ||||||    
T  2288 tatcttctgataaccaatagcccgcttgat 2317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 873 - 1105
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| |||||||||||||||||| |||||| |||||||||||||||| |||||||| ||||||||||| |||||||| || ||   |||||    
T  873 caaacaatctcagcaggagcatctctcctcttaggcctcctctcatcattcaatctctgcttacccttgtcagcaggagcactatatggtttaggacgac 972  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||| ||  ||||||| ||||| || || || || || ||||| ||||| ||  ||||    
T  973 tctgttgtcccttacctctgcgctcactcatcaccttgtaatgagccttattatcctcctcatatattctgcagctactcaccaactcagagaaaattct 1072  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     ||||||||||| ||||| || |||||||||||    
T  1073 aatcttctgatacccaatggctctcttgatgtc 1105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 104; Significance: 6e-52; HSPs: 2)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 7407 - 7618
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| ||||||||||||||| ||||||||| ||||||||||||| || |||||||| |||||| |||| |||||||||||||||  |||||    
T  7407 caaacaatctcagcaggagcatctctcctattgggcctcctctcatcattcaacctctgcttacccttgtcaacaggagcactatacggcttcggacgac 7506  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| ||||| ||||  || || ||||||||||||||||||||||||||||| ||||| ||||| || || || || |||||||||||||| ||||| ||    
T  7507 tctgctgtcctttgctccttcgatcactcatcaccttgtaatgagctttcgtgtcctcctcatagattctgcagctacttaccaattcagagaagttcct 7606  T
Q  201 tatcttctgata 212  Q
     |||||||||||    
T  7607 gatcttctgata 7618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 233
Target Start/End: Original strand, 3 - 58
Alignment:
Q  178 cttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 233  Q
    |||||||||||||| ||||| || ||||||||||| ||||| || |||||||||||    
T  3 cttaccaattcagagaagttcctgatcttctgatacccaatggctctcttgatgtc 58  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 4 - 230
Target Start/End: Complemental strand, 43351 - 43125
Alignment:
Q  4 acaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactct 103  Q
    ||||| ||| ||||||||||||||||||| |||||| ||||||||||||  || || ||||| |||| || ||| ||||||||| | ||   ||||||||    
T  43351 acaatctcattaggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgttagaaggagcactatacagttttggacgactct 43252  T
Q  104 gttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttat 203  Q
    |||||||||| ||||| ||||||||||||||||||||||||  ||| |||||||||| ||| |||||||| ||||||||||| || || || || |||||    
T  43251 gttgtcccttacctctgcgctcactcatcaccttgtaatgacatttggtatcctcttaatatatcctacagctgcttaccaaatctgagaaattccttat 43152  T
Q  204 cttctgataaccaatagccctcttgat 230  Q
    ||| |||||||||||||||||||||||    
T  43151 cttttgataaccaatagccctcttgat 43125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 102; Significance: 9e-51; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 422 - 193
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||| || |||| ||||||||||||||| ||||||||| |||||||||||||| | ||||| || ||||||||||||||||| ||||||||     |||    
T  422 caaacgatctcagcaggagcatctctcctattgggcctcctctcatcattcaatatctgctttcccttgtcagcaggggcactgtacggcttagggtgac 323  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| ||||| || |||||||||||||| ||||||||||| || ||||| || || ||||||||||| || ||||| ||||| ||| ||||    
T  322 tctgttgtcccttacctcttcgttcactcatcaccttataatgagctttggtgtcctcctcgtagatcctacaactactcaccaaatcagagaagattct 223  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
    |||||||||||| ||||| || ||||||||    
T  222 tatcttctgatagccaatggctctcttgat 193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 21183 - 21400
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| || |||||||||||||||||||||| ||||||||||||  || || || || ||||||||||||||||||||||| ||   |||||    
T  21183 caaacaatctcagcagaagcatctctcctcttgggcctcctctcatcattcagcctctgttttcctttgtcagcaggggcactatacggtttaggacgac 21282  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||  |||||||||||| |||||||||||||||||||||||||||||||| |||| || ||||| || || || || || ||||| || || || |||||    
T  21283 tctactgtcccttgcctttacgctcactcatcaccttgtaatgagctttcctatcttcctcatatattctgcagctactcaccaactcggagaaatttct 21382  T
Q  201 tatcttctgataaccaat 218  Q
    |||||||||||| |||||    
T  21383 tatcttctgatagccaat 21400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 15450 - 15673
Alignment:
Q  10 tcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtc 109  Q
    |||| ||||||||||||||| ||||||||| |||||||||| || || ||||| |  ||||||||||| |||||||||||||||  ||||||||||||||    
T  15450 tcagcaggagcatctctcctattgggcctcctctcatcatttaacctctgctttcgcttgtcagcaggagcactatacggcttcggacgactctgttgtc 15549  T
Q  110 ccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctg 209  Q
    | ||||   | || ||||||||||||||||||||||||||||| ||||| ||||| || || || || |||||||||||||| || ||||| ||||||||    
T  15550 ctttgctcattcgatcactcatcaccttgtaatgagctttcgtttcctcctcatagattctgcagctacttaccaattcagagaaatttctgatcttctg 15649  T
Q  210 ataaccaatagccctcttgatgtc 233  Q
    ||| ||||| || |||||||||||    
T  15650 atacccaatggctctcttgatgtc 15673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 191
Target Start/End: Original strand, 29909 - 30086
Alignment:
Q  14 taggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtccctt 113  Q
    ||||||||||||||||| | |||||| |||||||||||| ||| |||||||| ||||||||||| |||||| |||| |||  ||||||||| ||||||||    
T  29909 taggagcatctctcctcctaggcctcctctcatcattcagtctctgcttacctttgtcagcaggagcactagacggtttcggacgactctgctgtccctt 30008  T
Q  114 gcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcaga 191  Q
    |||||||||||||||||||||||| |||||||| || |||||||||||||| || |||||||| || ||||| |||||    
T  30009 gcctctacgctcactcatcaccttataatgagcctttgtatcctcttcatagattctacaactactcaccaaatcaga 30086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 18 - 229
Target Start/End: Complemental strand, 1766 - 1555
Alignment:
Q  18 agcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcct 117  Q
    |||||||||||||||||||||  |||||||||||| ||  ||||| || ||||||||||||||||| ||||||||   ||||||||||| |||||| ||     
T  1766 agcatctctcctcttgggccttctctcatcattcagtcgttgctttcccttgtcagcaggggcactgtacggcttaggacgactctgttttcccttaccc 1667  T
Q  118 ctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaa 217  Q
    || ||||||||||||||||||||||||||||| | ||| || ||||| || || || ||||||||||| ||||||||  |||| ||||||||||| ||||    
T  1666 ctccgctcactcatcaccttgtaatgagcttttgaatcttcctcatagattctgcagctgcttaccaactcagaaaaagttctgatcttctgatagccaa 1567  T
Q  218 tagccctcttga 229  Q
    | ||||||||||    
T  1566 tggccctcttga 1555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 480 - 251
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||| || |||||||||||||||||||||||||| ||  ||||||||||||  |  ||||| || ||||||||||||| ||| ||||||||   |||||    
T  480 caaactatctcagtaggagcatctctcctcttgggtcttctctcatcattcagccgttgctttcccttgtcagcagggggactgtacggcttaggacgac 381  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| || || ||||||||||||||||||||||||||||| | ||| || || || || || || ||||||||||| ||||||||  ||||    
T  380 tctgttgtcccttacccctccgctcactcatcaccttgtaatgagcttttgaatcttcctcgtagattctgcagctgcttaccaactcagaaaaagttct 281  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
     ||||||||||| ||||| |||||||||||    
T  280 gatcttctgatagccaatggccctcttgat 251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 5422 - 5654
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| |||||||||||||||| |||||||| ||||||||||||| || || || || || |||||||| |||||||| || ||   |||||    
T  5422 caaacaatctcagcaggagcatctctcctcgtgggcctcctctcatcattcaacctctgttttcccttatcagcaggagcactatatggtttaggacgac 5521  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||||||||| || ||||| || |||||||||||||||||||||||||| ||||| |||||||| ||||| || || || ||||| ||||| ||  ||||    
T  5522 tctgttgtcctttacctcttcgttcactcatcaccttgtaatgagctttagtatcttcttcatatatcctgcagctactcaccaactcagagaaaattct 5621  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
    |||||||||||| ||||| |  |||||||||||    
T  5622 tatcttctgatacccaatggttctcttgatgtc 5654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 90; Significance: 1e-43; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 39268 - 39038
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| ||||||||||||||||||||||||| ||||||||||||  || ||||| || ||||||||||| |||||||| || ||   | |||    
T  39268 caaacaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctctgctttcccttgtcagcaggagcactatatggtttaggaagac 39169  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| ||||| || |||||||||||||||||||||||||| ||||| || ||||| ||||| || || || ||||| ||||||||  ||||    
T  39168 tctgctgtcccttacctcttcgttcactcatcaccttgtaatgagctttagtatcttcctcatatatcctgcagctactcaccaactcagaaaa--ttct 39071  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     |||||||| || ||||| || |||||||||||    
T  39070 aatcttctggtacccaatggctctcttgatgtc 39038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 180648 - 180563
Alignment:
Q  127 ctcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 212  Q
    |||||||||||||||||||| ||||||||||| |||||||| || || || || |||| ||| || ||  |||| |||||||||||    
T  180648 ctcatcaccttgtaatgagccttcgtatcctcctcataaattctgcagctactcaccatttctgagaaaattctgatcttctgata 180563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 230
Target Start/End: Original strand, 5317 - 5513
Alignment:
Q  34 ggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatca 133  Q
    |||||| |||||||||| | ||| || || || || |||||||| ||||  || |||||   |||||| || || ||||||||| | | |||| |||  |    
T  5317 ggcctcatctcatcattaactctttgtttgcccttatcagcaggagcaccgtaaggctttggacgactttgctgacccttgcctttcctctcattcacaa 5416  T
Q  134 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    ||||||||||||| || ||||| || ||||| || || ||| |||| ||||| ||||||||||| |  |||||||  |||||||| |||| ||||||    
T  5417 ccttgtaatgagccttagtatcttcctcatatattctgcaattgctcaccaactcagaaaagttacggatcttctagtaaccaattgcccgcttgat 5513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 219 - 71
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||||||||||||||| ||||| |||||||||||| |||||||||| || || |||||||| ||||||||||| ||| | |||||||||  |||||    
T  219 caaacaatatcagtaggagcctctctgctcttgggcctcctctcatcatttaacctctgcttacccttgtcagcaggagcattttacggcttcggacgac 120  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttt 149  Q
    |||| |||||||||||||| || ||||||||||||||||||||||||||    
T  119 tctgctgtcccttgcctctgcgttcactcatcaccttgtaatgagcttt 71  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 89; Significance: 5e-43; HSPs: 4)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 1887 - 1655
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| |||||||||| |||||||||||||| ||||||||||||  || || || || ||||||||||| |||||||| || ||   | |||    
T  1887 caaacaatttcagcaggagcatctatcctcttgggcctcctctcatcattcagcctctgttttcctttgtcagcaggagcactatatggtttaggatgac 1788  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||||||| ||||| |||||||| ||| | |  || || ||||| ||||| ||  ||||    
T  1787 tctgctgtcccttacctctgcgctcactcatcaccttgtaatgagctttagtatcttcttcatatatcatgctgctactcaccaaatcagagaaaattct 1688  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
    |||||||||||| ||||| || |||||||||||    
T  1687 tatcttctgatacccaatggctctcttgatgtc 1655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 11841 - 11609
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||| | ||| ||||| || ||||||||||| |||||||| || ||   |||||    
T  11841 caaacgatctcagtaggagcatctctcctcttgggcctcctctcatcattaagtctctgctttcctttgtcagcaggagcactatatggtttaggacgac 11742  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| ||||| | ||||||||||||||| |||||||| || || ||||||||||| ||||| || ||||||||||| ||||| ||  || |    
T  11741 tctgctgtcccttacctcttctctcactcatcaccttataatgagccttagtgtcctcttcatatatcctgcagctgcttaccaaatcagagaaaatttt 11642  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     ||||| ||||| || || || |||||||||||    
T  11641 aatcttttgataccctatggctctcttgatgtc 11609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 218
Target Start/End: Original strand, 70867 - 70958
Alignment:
Q  127 ctcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaat 218  Q
    ||||||||||| || ||||| || |||||||| ||||||||| |||| || || ||||||||||| || ||||| ||||||||||| |||||    
T  70867 ctcatcaccttatagtgagcctttgtatcctcctcataaatcatacagctactcaccaattcagagaaatttctgatcttctgatacccaat 70958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 70741 - 70817
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcagg 77  Q
    ||||||| ||||  |||||||||||||| | | |||| | |||||||||||||||| || || || |||||||||||    
T  70741 caaacaacatcaacaggagcatctctccccctaggccgcctctcatcattcaatctttgttttcctttgtcagcagg 70817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 4 - 230
Target Start/End: Complemental strand, 1419 - 1193
Alignment:
Q  4 acaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactct 103  Q
    ||||| |||| ||||||||||||||||||||||||| | |||||||||| | | || || || ||||||||||| ||||| || |||||   ||||||||    
T  1419 acaatctcagcaggagcatctctcctcttgggcctcctatcatcattcattttctgttttcccttgtcagcaggagcactgtaaggcttaggacgactct 1320  T
Q  104 gttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttat 203  Q
    | |||||||| ||||| | ||||||||||||||||||||||||||| || || || ||||| |||||||| ||||||||||| ||||| |||  ||| ||    
T  1319 gctgtcccttacctctcctctcactcatcaccttgtaatgagcttttgtgtcttcctcatatatcctacagctgcttaccaactcagagaagactctgat 1220  T
Q  204 cttctgataaccaatagccctcttgat 230  Q
    ||||||||| || ||||| || |||||    
T  1219 cttctgataccctatagctcttttgat 1193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 12 - 218
Target Start/End: Complemental strand, 1196 - 990
Alignment:
Q  12 agtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtccc 111  Q
    ||||||||||||||||||| | |||||| |||||||||||| ||| |||||||| |||||| |||| ||||||||||| |||  ||||||||| ||||||    
T  1196 agtaggagcatctctcctcctaggcctcctctcatcattcagtctctgcttacccttgtcaacaggagcactatacggtttcggacgactctgctgtccc 1097  T
Q  112 ttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgat 211  Q
    || ||||| ||||||||||||||||| ||||||||||| || ||||| ||||| || || || || || ||||| ||||| || || |||||||| || |    
T  1096 ttacctctgcgctcactcatcaccttataatgagcttttgtgtcctcctcatatattctgcagctactcaccaaatcagagaaattccttatcttttggt 997  T
Q  212 aaccaat 218  Q
    |||||||    
T  996 aaccaat 990  T

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Target: scaffold0585 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 775 - 574
Alignment:
Q  21 atctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctcta 120  Q
    |||||||||||| |||||| |||||||||||| ||| |  ||||| ||||||||||| ||||| ||||| |||  ||||||||| |||||||| ||||||    
T  775 atctctcctcttaggcctcctctcatcattcagtctctatttacctttgtcagcaggagcactgtacggtttcggacgactctgctgtcccttacctcta 676  T
Q  121 cgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatag 220  Q
    | ||||||||||||||| |  |||||||| ||||||||||||||||||||||| ||||| || |||| |||||| || |||||||| || || |||||||    
T  675 cactcactcatcaccttat-gtgagcttttgtatcctcttcataaatcctacagctgctcactaattaagaaaaattccttatcttttggtagccaatag 577  T
Q  221 ccc 223  Q
    |||    
T  576 ccc 574  T

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Target: scaffold0133 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 12 - 218
Target Start/End: Complemental strand, 28209 - 28003
Alignment:
Q  12 agtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtccc 111  Q
    ||||||||||||||||||| | |||||| |||||||||||| ||| |||||||| |||||| |||| ||||||||||| |||  ||||||||| ||||||    
T  28209 agtaggagcatctctcctcctaggcctcctctcatcattcagtctctgcttacccttgtcaacaggagcactatacggtttcggacgactctgctgtccc 28110  T
Q  112 ttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgat 211  Q
    || ||||| ||||||||||||||||| ||||||||||| || ||||| ||||| || || || || || ||||| ||||| || || |||||||| || |    
T  28109 ttacctctgcgctcactcatcaccttataatgagcttttgtgtcctcctcatatattctgcagctactcaccaaatcagagaaattccttatcttttggt 28010  T
Q  212 aaccaat 218  Q
    |||||||    
T  28009 aaccaat 28003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 191
Target Start/End: Complemental strand, 6178 - 6002
Alignment:
Q  15 aggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttg 114  Q
    ||||||||||||||| || |||||| |||||||||||| ||| |||||||| ||||||||||||||||| ||||||||   ||||||||||||||||||     
T  6178 aggagcatctctcctattcggcctcctctcatcattcagtctttgcttacccttgtcagcaggggcactgtacggcttaggacgactctgttgtccctta 6079  T
Q  115 cctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcaga 191  Q
    ||||| || ||||||||||| || ||||||||||| || ||||| ||||||||||| |||   |||||||| |||||    
T  6078 cctcttcgttcactcatcactttataatgagctttggtgtcctcctcataaatcctgcaatgacttaccaaatcaga 6002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 14 - 230
Target Start/End: Original strand, 5984 - 6200
Alignment:
Q  14 taggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtccctt 113  Q
    |||| |||||||||||| | |||||| ||||||||||||   | || || || ||||||||||| ||||||||||| |||  ||||||||| || |||||    
T  5984 taggggcatctctcctcctaggcctcctctcatcattcagcatctgttttcctttgtcagcaggagcactatacggtttcggacgactctgctgaccctt 6083  T
Q  114 gcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataa 213  Q
     ||||| |||||||||||||| || |||||||||||||||||||||||||| || ||| | ||||||||||| || || || || |||||||| ||||||    
T  6084 acctctgcgctcactcatcactttataatgagctttcgtatcctcttcatatattctaaagctgcttaccaaatccgagaaattccttatcttttgataa 6183  T
Q  214 ccaatagccctcttgat 230  Q
    ||||| |||| ||||||    
T  6184 ccaatggcccgcttgat 6200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 191
Target Start/End: Original strand, 203764 - 203940
Alignment:
Q  15 aggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttg 114  Q
    |||||||||||||||   ||||||| |||||||||||| ||| |||||||| ||||||||||||||||| ||||||||   ||||||||| ||||||||     
T  203764 aggagcatctctcctaacgggcctcctctcatcattcagtctctgcttacccttgtcagcaggggcactgtacggcttaggacgactctgctgtccctta 203863  T
Q  115 cctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcaga 191  Q
    ||||| ||||||||||||||||| ||||||||||| || ||||| ||||| ||||| ||||  |||||||| |||||    
T  203864 cctcttcgctcactcatcaccttataatgagctttggtgtcctcctcatagatcctgcaacgacttaccaaatcaga 203940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 164
Target Start/End: Original strand, 424746 - 424840
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 164  Q
    |||||||||||| | ||||||||   |||||| || |||||||||||  | |||||| ||| || |||||||||||| || |||||||| |||||    
T  424746 tcagcaggggcattgtacggcttaggacgactatgctgtcccttgcccttccgctcattcaccatcttgtaatgagccttggtatcctcctcata 424840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 31 - 233
Target Start/End: Original strand, 54446 - 54648
Alignment:
Q  31 ttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactca 130  Q
    ||||||||| ||||||||||||| || ||||| || ||||||||||| ||||||||||||||   ||||||||| ||||| ||||  || || |||||||    
T  54446 ttgggcctcctctcatcattcaacctctgcttccctttgtcagcaggagcactatacggctttggacgactctgatgtcctttgctccttcgatcactca 54545  T
Q  131 tcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    ||||||| |||||||||||| | ||||| ||||| || || || || |||||||||||||| |||||||| ||||||||||| ||||| || || |||||    
T  54546 tcaccttataatgagctttcatgtcctcctcatagattctgcagctacttaccaattcagagaagtttctgatcttctgatacccaatggctcttttgat 54645  T
Q  231 gtc 233  Q
    |||    
T  54646 gtc 54648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 263595 - 263785
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||| || |||| |||||||||||||||   ||||||| |||||||||||| ||| |||||||| ||||||||||||||||| ||||||||   |||||    
T  263595 caaactatctcagcaggagcatctctcctaacgggcctcctctcatcattcagtctctgcttacccttgtcagcaggggcactgtacggcttaagacgac 263694  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcaga 191  Q
    |||| |||||||| ||||| ||||||||||||||||| |||||| |||| || ||||| ||||| ||||| ||||  |||||||| |||||    
T  263695 tctgctgtcccttacctcttcgctcactcatcaccttataatgaactttggtgtcctcctcatagatcctgcaacgacttaccaaatcaga 263785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 33307 - 33078
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||  ||||||||||||||||||||||||| ||||||||||||  || || || || ||||||||||| ||||| || || ||   |||||    
T  33307 caaacaatttcaacaggagcatctctcctcttgggcctcctctcatcattcatcctctgttttcctttgtcagcaggagcactgtatggtttaggacgac 33208  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| || || ||||||||||||||||||||||||||||| || || || ||||| ||||| || ||||||||||| ||||| ||  ||||    
T  33207 tctgctgtcccttaccccttcgctcactcatcaccttgtaatgagctttggtgtcttcctcatatatcctgcagctgcttaccaactcagagaaaattct 33108  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
     ||||| ||||| |||||||| || |||||    
T  33107 aatcttttgatacccaatagctcttttgat 33078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 67 - 233
Target Start/End: Complemental strand, 3920 - 3754
Alignment:
Q  67 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 166  Q
    ||||||||||| |||||||||||||||  ||||||||| ||||| ||||  || || ||||||||||||||||||||||||||||| ||||| ||||| |    
T  3920 ttgtcagcaggagcactatacggcttcggacgactctgctgtcctttgctccttcgatcactcatcaccttgtaatgagctttcgtgtcctcctcataga 3821  T
Q  167 tcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 233  Q
    | || || || |||||||||||||| ||||| || ||||||||||| ||||| || |||||||||||    
T  3820 ttctgcagctacttaccaattcagagaagttcctgatcttctgatacccaatggctctcttgatgtc 3754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 8983 - 9215
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||  ||||||||||||||||||||| ||  ||||||||||||   | ||||| || ||||||||||| |||||||||||||||  |||||    
T  8983 caaacaatctcatcaggagcatctctcctcttgggtcttctctcatcattcagcttctgcttccctttgtcagcaggagcactatacggcttcggacgac 9082  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| ||||| ||||  || || |||||||||||||  ||||||| |||||| ||||| ||||| ||  | || || |||||||||||||| |||||| |    
T  9083 tctgctgtcctttgctccttcgatcactcatcacctaataatgagatttcgtgtcctcctcatagattatgcagctacttaccaattcagagaagttttt 9182  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     |||||||| || ||||| || |||||||||||    
T  9183 gatcttctggtacccaatggctctcttgatgtc 9215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 17419 - 17187
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||| || |||| ||||||||||||||| || |||||| |||||||||||| ||| || || || ||||||||||||||||| ||||| ||   |||||    
T  17419 caaactatctcagcaggagcatctctcctattcggcctcctctcatcattcagtctttgttttcccttgtcagcaggggcactgtacggtttaggacgac 17320  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| ||||| ||||||||||||||||| ||||||||||| || ||||| ||||| ||||| ||||   ||||||| ||||| ||| ||||    
T  17319 tctgctgtcccttacctcttcgctcactcatcaccttataatgagcttttgtgtcctcctcatagatcctgcaacgatttaccaaatcagagaagattct 17220  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     ||||  || || || || || |||||||||||    
T  17219 aatctgttgctaccctatggctctcttgatgtc 17187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 164
Target Start/End: Complemental strand, 4775 - 4621
Alignment:
Q  10 tcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtc 109  Q
    |||| ||||||||||||||| || |||||| |||||||||||| ||| ||||| || ||||||  ||||||||| ||||| ||   ||||||||| ||||    
T  4775 tcagcaggagcatctctcctatttggcctcctctcatcattcagtctttgctttcccttgtcaaaaggggcactgtacggtttaggacgactctgctgtc 4676  T
Q  110 ccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 164  Q
    |||| ||||| ||||||||||||||||| ||||||| ||| || ||||| |||||    
T  4675 ccttacctcttcgctcactcatcaccttataatgaggttttgtgtcctcctcata 4621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 9722 - 9538
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||| || |||| |||||||||||||||   ||||||| |||||||||| | |||  ||||||| || |||||||||||||| ||||||||   |||||    
T  9722 caaactatctcagcaggagcatctctcctaacgggcctcctctcatcattaagtctcagcttacccttatcagcaggggcactgtacggcttaggacgac 9623  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaa 185  Q
    ||||||||||||| ||||| ||||||||||||||||| ||||||||||| || ||||| ||||| ||||| ||||  ||||||||    
T  9622 tctgttgtcccttacctcttcgctcactcatcaccttataatgagctttggtgtcctcctcatagatcctgcaacgacttaccaa 9538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 185
Target Start/End: Original strand, 40436 - 40611
Alignment:
Q  10 tcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtc 109  Q
    |||| ||||||||||||||| || |||||| |||||||||||| ||| ||||| || ||||||||||||||||| ||||| ||   ||||||||||||||    
T  40436 tcagcaggagcatctctcctattcggcctcctctcatcattcagtctttgctttcccttgtcagcaggggcactgtacggtttaggacgactctgttgtc 40535  T
Q  110 ccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaa 185  Q
    || | ||||| ||||||||||||||||| ||||||||||| || ||||||| ||| || || ||||  ||||||||    
T  40536 ccatacctcttcgctcactcatcaccttataatgagcttttgtgtcctctttatagattctgcaacgacttaccaa 40611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 3000 - 3226
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||  ||||||||||||||||||||||||| ||||||||||||| || || || || ||||||||||| ||||||||||| ||   | |||    
T  3000 caaacaatctcaacaggagcatctctcctcttgggcctcctctcatcattcaacctctgttttcctttgtcagcaggagcactatacggtttaggatgac 3099  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| ||||  || |||||      || ||||||||||||||||||||| ||||| |||||||| ||||| || || || ||||| ||||| ||  ||||    
T  3100 tctgctgtcatttacctct------acacatcaccttgtaatgagctttagtatcttcttcatatatcctgcagctactcaccaaatcagagaaaattct 3193  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
    |||||||||||| ||||| || |||||||||||    
T  3194 tatcttctgatacccaatggctctcttgatgtc 3226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 9707 - 9477
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||||||||||| ||||||||||||||| || |||||| ||||||||||||  || ||||| || || |||||| | |||||||| || ||   | |||    
T  9707 caaacaatatcagcaggagcatctctcctgtttggcctcctctcatcattcatcctttgctttcccttatcagcaagagcactatatggtttaggatgac 9608  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| ||||| || ||||| || |||||||||||||||||| |||| || |||||||| ||||  ||||| || || || ||||| ||||| ||| ||||    
T  9607 tctgctgtcctttacctcttcgttcactcatcaccttgtaaagagccttagtatcctcctcat--atcctgcagctactcaccaactcagagaagattct 9510  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
    |||||||||||| ||||| || |||||||||||    
T  9509 tatcttctgatacccaatggctctcttgatgtc 9477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 23742 - 23686
Alignment:
Q  139 taatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaag 195  Q
    |||||||| || |||||||| ||||||||||| |||||||||||||  |||||||||    
T  23742 taatgagccttggtatcctcctcataaatcctgcaactgcttaccagctcagaaaag 23686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 164336 - 164107
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||| || |||| |||||| |||||||| ||||||||| ||||||||||||| || || || || ||||||||||||||||| || |  ||   |||||    
T  164336 caaacgatctcagcaggagcgtctctcctattgggcctcctctcatcattcaacctctgttttcccttgtcagcaggggcactgtatgatttaggacgac 164237  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| ||||| || ||||| || ||||||||||||||||||||||||||||| | ||| ||||| ||||| || || || ||||| || || ||  ||||    
T  164236 tctgctgtcctttacctcttcgttcactcatcaccttgtaatgagctttcgtgttctcctcatatatcctgcagctactcaccaactcggagaaaattct 164137  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
     ||||||||||| ||||| || ||||||||    
T  164136 gatcttctgatacccaatggctctcttgat 164107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1845 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold1845
Description:

Target: scaffold1845; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 1239 - 1007
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| ||||||||||||||||||||| ||| | ||||||||||   | ||||| || ||||||||||| ||||| || |||||   ||||     
T  1239 caaacaatctcagcaggagcatctctcctcttgggtctcctatcatcattcatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgat 1140  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||  |||||||| || || | ||||||||| | ||||||||||||||| || || ||||| |||||||| |||||| ||||||| ||||| |||  |||    
T  1139 tcttctgtccctttcccctcctctcactcattatcttgtaatgagctttggtgtcttcttcgtaaatcctgcaactgtttaccaactcagagaagaatct 1040  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     |||| |||||| |||||||| ||||| |||||    
T  1039 gatctgctgatacccaatagctctcttaatgtc 1007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1426 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 1542 - 1310
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| |||||||||||||||||| |||||| | |||||| |||   | ||||| || ||||||||||| ||||| || ||||| | ||||     
T  1542 caaacaatctcagaaggagcatctctcctcttaggcctcctatcatcactcatcttctgctttcctttgtcagcaggagcactgtaaggcttatgacgat 1443  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| || || | ||||||||| |  |||||||||||||| || || ||||||||||| ||||| ||| | ||||| ||||| |||  |||    
T  1442 tctgctgtcccttacccctcctctcactcattatgttgtaatgagctttggtgtcttcttcataaattctacacctgttaaccaactcagagaagactct 1343  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
    ||||| |||||| |||||||| || ||||||||    
T  1342 tatctgctgatacccaatagctcttttgatgtc 1310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 2200 - 2363
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    ||||| || |||| ||||||||||||||| ||  ||||| ||||||||||||| || ||||| || ||||||| ||||||||| ||||| ||   |||||    
T  2200 caaactatctcagcaggagcatctctcctattccgcctcctctcatcattcaacctttgctttcctttgtcagtaggggcactgtacggtttaggacgac 2299  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 164  Q
    |||| |||||||| ||||| ||||||||||||||||| ||||||||||| || ||||| |||||    
T  2300 tctgctgtcccttacctcttcgctcactcatcaccttataatgagcttttgtgtcctcctcata 2363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 15 - 233
Target Start/End: Original strand, 22505 - 22723
Alignment:
Q  15 aggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttg 114  Q
    ||||||||||||||| ||||||||| |||||||||||| ||| || || || ||||| ||||||||||| || || ||   | ||||||  ||||||||     
T  22505 aggagcatctctcctattgggcctcctctcatcattcagtctttgatttcctttgtcggcaggggcactgtatggtttaggaagactctactgtccctta 22604  T
Q  115 cctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataac 214  Q
    || || ||| ||||||||||| | ||||||||||| || ||||| ||||| || || || || |||||||| ||||| ||  |||||||||||||||| |    
T  22605 ccccttcgcccactcatcaccatataatgagcttttgtgtcctcctcatagattctgcagctacttaccaaatcagagaaaattcttatcttctgatacc 22704  T
Q  215 caatagccctcttgatgtc 233  Q
    |||| || |||||||||||    
T  22705 caatggctctcttgatgtc 22723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 5144 - 4912
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| |||||||||||||||| | |||| | |||||| |||||  || ||||| || ||||||||||| |||||||| || ||   |||||    
T  5144 caaacaatctcagcaggagcatctctcctcctaggccacctctcattattcagcctttgctttcccttgtcagcaggagcactatatggtttaggacgac 5045  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||  | ||| || ||||| || |||||||||||||||||||||||||| || || || ||||| ||| | || || || ||||||||||| ||  ||||    
T  5044 tctactttcctttacctcttcgttcactcatcaccttgtaatgagctttagtgtcttcctcatatatcatgcagctactcaccaattcagagaaaattct 4945  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     ||||||||||| ||||| || |||||||||||    
T  4944 aatcttctgatacccaatggctctcttgatgtc 4912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 8956 - 8724
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| | || || |||||||||||||||||||||| ||||||||||||  || ||||| || ||||| ||||| |||||||| || || | || ||    
T  8956 caaacaatcttagcagaagcatctctcctcttgggcctcctctcatcattcagcctctgctttcccttgtctgcaggagcactatatggtttatgacaac 8857  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| | ||| || ||||| || |||||||| ||||||| ||||||||| ||||| || ||||| ||||| || || || ||||| ||||| ||  ||||    
T  8856 tctgctatcctttacctcttcgttcactcataaccttgtcatgagctttagtatcttcctcatatatcctgcagctactcaccaactcagagaaaattct 8757  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     | ||||||||| ||||| || |||||||||||    
T  8756 aaccttctgatacccaatggctctcttgatgtc 8724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 233
Target Start/End: Complemental strand, 53342 - 53126
Alignment:
Q  17 gagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcc 116  Q
    ||||||||||||| ||||||||| |||||||||||||||| ||||| || ||||||||||||||||| || || ||   ||||   || ||||||||  |    
T  53342 gagcatctctcctattgggcctcctctcatcattcaatctctgctttcccttgtcagcaggggcactgtatggtttaggacgaacttgatgtcccttatc 53243  T
Q  117 tctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 216  Q
    ||| ||||||||||||||||| |||||||| || || || || ||||| ||||| || || || ||||| || || ||| |||| ||||| ||||| |||    
T  53242 tcttcgctcactcatcaccttataatgagccttggtgtcttcctcatatatcctgcagctactcaccaaatccgagaagattctaatcttttgataccca 53143  T
Q  217 atagccctcttgatgtc 233  Q
    || || |||||||||||    
T  53142 atggctctcttgatgtc 53126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 514288 - 514068
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| |||||||||||||||||| |||||| | ||||||||||   | | ||| || ||||||||||| ||||| || |||||   ||||     
T  514288 caaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattcatcttcttctttcctttgtcagcaggagcactttaaggcttaggacgat 514189  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| || || | ||||||||| | ||||||||||||||| || || ||||||||||| ||||| ||| ||||||| ||||| |||  |||    
T  514188 tctgctgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcataaattctacacctgtttaccaactcagagaagactct 514089  T
Q  201 tatcttctgataaccaatagc 221  Q
     |||| |||||| ||||||||    
T  514088 gatctgctgatacccaatagc 514068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 442154 - 442238
Alignment:
Q  134 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaat 218  Q
    |||||||||||||||| ||||| || ||||| || ||||| ||||| |||| |||||||||||| |  ||||| ||||| |||||    
T  442154 ccttgtaatgagctttagtatcttcctcatagattctacagctgctcaccagttcagaaaagttacgaatcttatgatacccaat 442238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 223
Target Start/End: Complemental strand, 850 - 748
Alignment:
Q  121 cgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatag 220  Q
    ||||||||||||||||| ||||||||||| ||||| || |||||||||||||| || || ||||| |||||||||||||| ||||||||||||||||| |    
T  850 cgctcactcatcaccttataatgagctttggtatcatcctcataaatcctacagctactcaccaactcagaaaagtttctaatcttctgataaccaatgg 751  T
Q  221 ccc 223  Q
    |||    
T  750 ccc 748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 67 - 233
Target Start/End: Original strand, 1 - 167
Alignment:
Q  67 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 166  Q
    |||||| |||| |||||||| ||||||  |||||  || || ||||||   || |||||| || | ||||| || |||||| ||||||||||||||||||    
T  1 ttgtcaacaggagcactatagggcttcggacgaccttgctgacccttgttcctccgctcattcctaaccttatagtgagctctcgtatcctcttcataaa 100  T
Q  167 tcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 233  Q
    ||||||  |||||||||||||||||||| ||||| |||||||||||||| || || |||||||||||    
T  101 tcctactgctgcttaccaattcagaaaaatttctaatcttctgataacctatggctctcttgatgtc 167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 11346 - 11564
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| |||||||||||||||||| || ||| | |||||||||||  | ||||| || ||||||||||| |||||||| |||||   ||||     
T  11346 caaacaatctcagaaggagcatctctcctcttaggactcctatcatcattcaaaatctgctttcctttgtcagcaggagcactataaggcttaggacgaa 11445  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| || ||||| || || | ||||||||| | ||||||||||||||| || || || ||||||||||| || ||| ||||||| ||||| |||  |||    
T  11446 tctgctgacccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcctcataaatcctgcagctgtttaccaactcagagaagactct 11545  T
Q  201 tatcttctgataaccaata 219  Q
     |||| |||||| ||||||    
T  11546 gatctgctgatacccaata 11564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 223
Target Start/End: Original strand, 25949 - 26051
Alignment:
Q  121 cgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatag 220  Q
    ||||||||||||||||| ||||||||||| ||||| || |||||||||||||| || || ||||| |||||||||||||| ||||||||||||||||| |    
T  25949 cgctcactcatcaccttataatgagctttggtatcatcctcataaatcctacagctactcaccaactcagaaaagtttctaatcttctgataaccaatgg 26048  T
Q  221 ccc 223  Q
    |||    
T  26049 ccc 26051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 7926 - 8119
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| ||||||||| |||| || ||||| || ||| |||||||||||||||| ||||  || |||||| |||| ||||| || ||||||  |||||    
T  7926 caaacaatctcagtaggaacatcccttctcttaggtctcctctcatcattcaatctctgctctcctttgtcaacaggagcactgtagggcttcggacgac 8025  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaa 194  Q
      || || ||||||   || ||||||||| | ||||| |||||||| ||||||||||| |||||||| |||||||| || ||||||||||||||    
T  8026 cttgctgacccttgttcctccgctcactcctaaccttataatgagccttcgtatcctcctcataaattctacaactactcaccaattcagaaaa 8119  T

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Target: scaffold0609; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1308 - 1368
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgct 61  Q
    |||||||| ||||||||| |||| || ||||| || ||| |||||||||||||||| ||||    
T  1308 caaacaatctcagtaggaacatcccttctcttaggtctcctctcatcattcaatctctgct 1368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 230
Target Start/End: Original strand, 252004 - 252217
Alignment:
Q  17 gagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcc 116  Q
    ||||||||||||||||||||||| | ||||||||||   |||| || ||  || ||||||| ||||| || || ||   |||| | ||||||||||| ||    
T  252004 gagcatctctcctcttgggcctcctatcatcattcatcttatgttttcctgtggcagcaggagcactgtaaggtttaggacgattatgttgtcccttacc 252103  T
Q  117 tctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 216  Q
     || | ||||||||||||||||||||||||||| || || || ||||| ||||| || ||||||||||||||||| ||  |||| ||||||||||| | |    
T  252104 cctcctctcactcatcaccttgtaatgagctttggtgtcttcctcatatatcctgcagctgcttaccaattcagagaaaattctaatcttctgataccta 252203  T
Q  217 atagccctcttgat 230  Q
    ||||| || |||||    
T  252204 atagctcttttgat 252217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 194
Target Start/End: Complemental strand, 16511 - 16351
Alignment:
Q  34 ggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatca 133  Q
    |||||| ||||||||||||  || |||||||| || |||||||| |||||||| |||||   ||||||||| || | ||| || || ||||||||||| |    
T  16511 ggcctcctctcatcattcaccctttgcttacctttatcagcaggagcactataaggctttggacgactctgctgactcttacccctccgctcactcataa 16412  T
Q  134 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaa 194  Q
    |||||||||||||||| ||||| || ||||| ||||| ||||| || ||||||||||||||    
T  16411 ccttgtaatgagctttggtatcttcctcatagatcctgcaacttctcaccaattcagaaaa 16351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 830 - 1062
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| |||||||||||||||||| |||||| | |||||| ||||  | | ||| || ||||||||||| ||||| || |||||   ||||     
T  830 caaacaatctcagaaggagcatctctcctcttaggcctcctatcatcaatcaacttctactttcctttgtcagcaggagcactgtaaggcttaggacgat 929  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| || || | ||||||||| | ||||||||||||||| || || ||||||||||| || || ||| | ||||| ||||| ||| ||||    
T  930 tctgctgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcataaattctgcatctgttaaccaactcagagaagattct 1029  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     |||| ||||||   |||||| || ||||||||    
T  1030 gatctgctgatactgaatagctcttttgatgtc 1062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 34 - 230
Target Start/End: Complemental strand, 57516 - 57320
Alignment:
Q  34 ggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatca 133  Q
    |||||| |||||||||||| ||| |||||||| || |||||||| ||||| || |||||   |||||| || || || |||||| | |||||| |||  |    
T  57516 ggcctcctctcatcattcattctttgcttacccttatcagcaggagcactgtaaggctttggacgactttgctgacctttgcctttccgctcattcacaa 57417  T
Q  134 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    ||||||||||||| || ||||| || ||||| || ||||||||||| ||||  ||||||||||| |  |||||||| |||||||| |||| ||||||    
T  57416 ccttgtaatgagccttagtatcttcctcatatattctacaactgctcaccagctcagaaaagttacggatcttctggtaaccaattgcccgcttgat 57320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 67043 - 66817
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| || | ||||||||||||||||||||| ||| | ||||||||||   | | ||| || |||||| |||| ||||| || |||||   ||||     
T  67043 caaacaatctcggaaggagcatctctcctcttgggtctcctatcatcattcatcatctactttcctttgtcaacaggagcactgtaaggcttaggacgat 66944  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| ||||||||||| || | ||||||||| | ||||||||||||||| || || || ||||||||||| || ||| ||||||| ||||| ||   |||    
T  66943 tctgctgtcccttgcccctcctctcactcattatcttgtaatgagctttggtgtcttcctcataaatcctgcagctgtttaccaaatcagagaacactct 66844  T
Q  201 tatcttctgataaccaatagccctctt 227  Q
     |||| |||||| |||||||| |||||    
T  66843 gatctgctgatacccaatagctctctt 66817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1914 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1914
Description:

Target: scaffold1914; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 170
Target Start/End: Complemental strand, 1132 - 996
Alignment:
Q  34 ggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatca 133  Q
    |||||| |||||||||| | ||| |||||||| || ||||| |||||||||||||| ||   |||| |||| |||||||| ||||| ||||||||| |||    
T  1132 ggcctcctctcatcattaagtctctgcttacccttatcagccggggcactatacggtttaggacgattctgatgtcccttacctcttcgctcactcttca 1033  T
Q  134 ccttgtaatgagctttcgtatcctcttcataaatcct 170  Q
    |||| ||||||||||| || ||||| ||||| |||||    
T  1032 ccttataatgagctttggtgtcctcctcatagatcct 996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 58 - 233
Target Start/End: Original strand, 30336 - 30511
Alignment:
Q  58 tgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcct 157  Q
    ||||| || ||||||||||| ||||| || |||||   ||||||||| ||||||||||| || | |||||||||   ||||||||||||||| || || |    
T  30336 tgctttcctttgtcagcaggagcactgtaaggcttaggacgactctgctgtcccttgcccctcctctcactcattgtcttgtaatgagctttggtgtctt 30435  T
Q  158 cttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 233  Q
    |||||||||| || |||||| | ||||| ||||| |||  ||| |||| |||||| |||||||| || ||||||||    
T  30436 cttcataaattctgcaactgttaaccaactcagagaagactctgatctgctgatacccaatagctctattgatgtc 30511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 223
Target Start/End: Complemental strand, 30843 - 30741
Alignment:
Q  121 cgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatag 220  Q
    ||||||| ||| ||||||||||||||||| ||||||||||| || || ||||||||||| |||||||||||||| |  || ||| ||||||||||||| |    
T  30843 cgctcacacataaccttgtaatgagctttggtatcctcttcgtagattctacaactgctcaccaattcagaaaattgcctaatcctctgataaccaatgg 30744  T
Q  221 ccc 223  Q
    |||    
T  30743 ccc 30741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 7242 - 7471
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||  |||||||||| || |  | |||||| |||||||||||| ||| |||||||| || |||||||| ||||| || |||||    ||||    
T  7242 caaacaatctcaacaggagcatctttctttctaggcctcctctcatcattcattctttgcttacccttatcagcaggagcactgtaaggctttggtcgac 7341  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    | || || | ||||||| | |||||| |||  |||||||||||||| || ||||| || ||||| ||||| |||||||| ||||  |||||||| || |     
T  7342 tttgctgactcttgcctttccgctcattcacaaccttgtaatgagccttagtatcttcctcatatatcctgcaactgctcaccagctcagaaaaattacg 7441  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
     |||||||| |||||||| |||| ||||||    
T  7442 gatcttctggtaaccaattgcccgcttgat 7471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 14372 - 14601
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||  |||||||||| || |  | |||||| |||||||||||| ||| |||||||| || |||||||| ||||| || |||||    ||||    
T  14372 caaacaatctcaacaggagcatctttctttctaggcctcctctcatcattcattctttgcttacccttatcagcaggagcactgtaaggctttggtcgac 14471  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    | || || | ||||||| | |||||| |||  |||||||||||||| || ||||| || ||||| ||||| |||||||| ||||  |||||||| || |     
T  14472 tttgctgactcttgcctttccgctcattcacaaccttgtaatgagccttagtatcttcctcatatatcctgcaactgctcaccagctcagaaaaattacg 14571  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
     |||||||| |||||||| |||| ||||||    
T  14572 gatcttctggtaaccaattgcccgcttgat 14601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 23858 - 23626
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||  ||||||||||||||||||||||||| | ||||||  ||   | ||||| || ||||||||||| ||||| || |||||   |||||    
T  23858 caaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgac 23759  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| || || | ||||||||| | ||| ||||||| ||| || || |||||||| || || || ||  | ||||| ||||| |||  |||    
T  23758 tctgttgtcccttacccctcctctcactcataatcttataatgagttttggtgtcttcttcatagattctgcacctattaaccaactcagagaagactct 23659  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     |||| |||||| |||||||| || ||||||||    
T  23658 gatctgctgatacccaatagctcttttgatgtc 23626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 30261 - 30077
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| |||||||||| |||||||||||||| | ||||||||||   | || || || ||||||||||| ||||| || || ||   ||||     
T  30261 caaacaatctcagcaggagcatctttcctcttgggcctcctgtcatcattcatcttctgtttccctttgtcagcaggagcactgtaaggtttaggacgat 30162  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaa 185  Q
    |||||| |||||| || || | ||||||||| | || |||||||||||| || ||||| ||||| ||||| || |||||||||||    
T  30161 tctgttatcccttacccctcctctcactcattatctagtaatgagcttttgtgtcctcctcatatatcctgcagctgcttaccaa 30077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 1357 - 1128
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||  |||||||||   ||| |||||||||| | | ||||||||||||  || |||| ||| || |||||||| | ||| || |||||   ||||     
T  1357 caaacaacttcagtaggattctctttcctcttgggtcccctctcatcattcaccctctgctcacccttatcagcaggagtactgtaaggctttggacgat 1258  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||| | ||| ||| | | ||||||||   |||||| |||||||||||||||||| ||||| || || |||||||| |||| || ||||||||| |     
T  1257 tctgttgactcttacctttcctctcactcacagccttgtgatgagctttcgtatcctcctcatagattctgcaactgctcaccagtttagaaaagttacc 1158  T
Q  201 tatcttctgataaccaatagccctcttgat 230  Q
     ||||||||||| ||||  |||||||||||    
T  1157 gatcttctgatatccaacggccctcttgat 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2165 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold2165
Description:

Target: scaffold2165; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 738 - 518
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||| |||||||||||||||||| |||||| | ||||||||||   | ||||| || ||||||  ||| ||||| || |||||   ||||     
T  738 caaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattcatcttctgctttcctttgtcaataggagcactgtaaggcttaggacgat 639  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    |||| |||||||| || || | || |||||| | |||||||| | |||| || || ||||||||||| ||||| ||| | ||||| ||||| |||  |||    
T  638 tctgctgtcccttacccctcctctaactcattatcttgtaataaactttggtgtcttcttcataaattctacacctgttaaccaactcagagaagactct 539  T
Q  201 tatcttctgataaccaatagc 221  Q
     |||| |||||| ||||||||    
T  538 aatctgctgatacccaatagc 518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1274 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1274
Description:

Target: scaffold1274; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 34 - 230
Target Start/End: Original strand, 20 - 215
Alignment:
Q  34 ggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatca 133  Q
    |||||| |||||||||||||||| |||||||| || |||||||| ||||| || |||||   |||||| || ||  |||||||| | | |||| |||  |    
T  20 ggcctcctctcatcattcaatctttgcttacccttatcagcaggagcactgtaaggctttggacgactttgctg-accttgcctttcctctcattcacaa 118  T
Q  134 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    |||||||||||||||| ||||| || ||||| ||  | |||||||| ||||  ||||||||||| |  || ||||| |||||||| |||| ||||||    
T  119 ccttgtaatgagctttggtatcttcctcatagattttgcaactgctcaccagctcagaaaagttacggattttctggtaaccaattgcccgcttgat 215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 70 - 230
Target Start/End: Original strand, 11466 - 11626
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 169  Q
    ||||||||||||||||| |||||   |||||| || || ||||||||| | | |||| |||  |||||||||||||| || ||||| || ||||| || |    
T  11466 tcagcaggggcactataaggcttgggacgactttgctgacccttgcctttcctctcattcacaaccttgtaatgagccttagtatcttcctcatatattc 11565  T
Q  170 tacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    | |||||||| ||||  ||||||||||| |  |||||||| |||||||| |||| ||||||    
T  11566 tgcaactgctcaccagctcagaaaagttacggatcttctggtaaccaattgcccgcttgat 11626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 42104 - 42336
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgac 100  Q
    |||||||| |||  ||||||||||||||||||||||||| | ||||||  ||   | ||||| || ||||||||||| ||||| || |||||   ||||     
T  42104 caaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgat 42203  T
Q  101 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 200  Q
    ||||||||||||| || || | ||||||||| | ||| ||||||||||| || || |||||||| || || || ||  | ||||| ||||| |||  | |    
T  42204 tctgttgtcccttacccctcctctcactcataatcttataatgagctttggtgtcttcttcatagattctgcacctattaaccaactcagagaagacttt 42303  T
Q  201 tatcttctgataaccaatagccctcttgatgtc 233  Q
     |||| |||||| |||||||| || ||||||||    
T  42304 gatctgctgatacccaatagctcttttgatgtc 42336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 227
Target Start/End: Original strand, 17703 - 17834
Alignment:
Q  96 acgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaag 195  Q
    ||||||||| |||||||| || || | ||||||||| | ||| ||||||||||| || || ||||||||||| || |||||| ||||||| ||||| |||    
T  17703 acgactctgctgtcccttacccctcctctcactcattatcttataatgagctttggtgtcttcttcataaattctgcaactgtttaccaactcagagaag 17802  T
Q  196 tttcttatcttctgataaccaatagccctctt 227  Q
      ||| |||| |||||| |||||||| |||||    
T  17803 actctgatctgctgatacccaatagctctctt 17834  T

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Target: scaffold0708 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 5080 - 4998
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcact 83  Q
    |||||||| |||| ||||||||||||||||||||||||| | ||||||||||  || ||||| || ||||||||||| |||||    
T  5080 caaacaatttcagcaggagcatctctcctcttgggcctcctatcatcattcatcctctgcttccctttgtcagcaggagcact 4998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 230
Target Start/End: Original strand, 5589 - 5686
Alignment:
Q  133 accttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    ||||||||||||||||||||||| || ||||| || || |||||||| |||| |||||||||||  |  ||||||||||| ||||| |||| ||||||    
T  5589 accttgtaatgagctttcgtatcttcctcatagattctgcaactgctcaccagttcagaaaagtcacggatcttctgatatccaatggcccacttgat 5686  T

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Target: scaffold0012 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 45 - 230
Target Start/End: Complemental strand, 216311 - 216126
Alignment:
Q  45 atcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatga 144  Q
    |||||||||||| |||||||| || |||||||| ||||| || |||||   |||||| || || ||||||||| | | |||| |||  ||||||||||||    
T  216311 atcattcaatctttgcttacccttatcagcaggagcactgtaaggctttggacgactttgctgacccttgcctttcctctcattcacaaccttgtaatga 216212  T
Q  145 gctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    || || |||||||  ||||| ||  | |||||||| | ||  ||||||||||| |  |||||||| |||||||| |||| ||||||    
T  216211 gccttagtatccttctcatatattatgcaactgctcagcagctcagaaaagttacggatcttctggtaaccaattgcccacttgat 216126  T

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Target: scaffold0457 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 233
Target Start/End: Complemental strand, 13932 - 13757
Alignment:
Q  58 tgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcct 157  Q
    ||||| || ||||||||||| ||||| || |||||   |||| |||| |||||||| || || | ||||||||| | ||| ||||||||||| || || |    
T  13932 tgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttacccctcctctcactcattatcttttaatgagctttggtgtctt 13833  T
Q  158 cttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 233  Q
    ||||||| || ||||| ||| | ||||| ||||| |||  ||| |||| |||||| | |||||| |||||||||||    
T  13832 cttcatagattctacacctgttaaccaactcagagaagactctgatctgctgatatctaatagctctcttgatgtc 13757  T

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Target: scaffold0165 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 12322 - 12421
Alignment:
Q  10 tcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtc 109  Q
    ||||||||||||||||||||||  |||||| ||||||||||||  || || ||| | ||||||||||| ||||||||||  |||  ||||||||| ||||    
T  12322 tcagtaggagcatctctcctctaaggcctcctctcatcattcagcctctgtttatctttgtcagcaggagcactatacgatttcggacgactctgctgtc 12421  T

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Target: scaffold0282 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 230
Target Start/End: Complemental strand, 9922 - 9828
Alignment:
Q  136 ttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    |||||||| ||||| |||||||||||||| || || |||||||| || ||||||| |||||| |  ||||||||||| ||||| |||| ||||||    
T  9922 ttgtaatgtgctttggtatcctcttcatagattctgcaactgctcactaattcagtaaagttacggatcttctgatatccaattgcccgcttgat 9828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 197
Target Start/End: Complemental strand, 13376 - 13213
Alignment:
Q  34 ggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatca 133  Q
    |||||| |||||||||||||||| |||||||| || |||||||| |||||  | | |||   || ||| || || ||||||||| | | |||| |||  |    
T  13376 ggcctcctctcatcattcaatctttgcttacccttatcagcaggagcactgcaagactttggacaactttgctgacccttgcctttcctctcattcacaa 13277  T
Q  134 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtt 197  Q
    ||| |||| |||| || ||||| || ||||| || ||||||||||| ||||  |||||||||||    
T  13276 cctcgtaacgagccttagtatcttcctcatatattctacaactgctcaccagctcagaaaagtt 13213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 2252 - 2313
Alignment:
Q  133 accttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaa 194  Q
    |||||||||||||||||||||||||| ||||| || || ||||| || ||||||||||||||    
T  2252 accttgtaatgagctttcgtatcctcctcatagattctgcaactactcaccaattcagaaaa 2313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 93703 - 93618
Alignment:
Q  127 ctcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 212  Q
    |||||||||||||||||||| ||||||||||| |||||||| || || || || |||||||| || ||  |||| |||||||||||    
T  93703 ctcatcaccttgtaatgagccttcgtatcctcctcataaattctgcagctactcaccaattctgagaaaattctgatcttctgata 93618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 170
Target Start/End: Complemental strand, 107643 - 107543
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 169  Q
    ||||| |||||||| ||||||||   |||||||||||||||||||||  | | |||| |||  | || ||| ||||| ||||||||||||||||| ||||    
T  107643 tcagcgggggcactgtacggcttaggacgactctgttgtcccttgcccttcctctcattcactatctcgtagtgagccttcgtatcctcttcatagatcc 107544  T
Q  170 t 170  Q
    |    
T  107543 t 107543  T

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Target: scaffold0006 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 230
Target Start/End: Original strand, 104635 - 104824
Alignment:
Q  41 tctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgta 140  Q
    |||||||| ||| ||| || || || || |||||||| |||||||| |||||   ||||||||| || || ||| || | |||||| |||  | ||||||    
T  104635 tctcatcaatcattctctgttttcccttatcagcaggagcactataaggctttggacgactctgctgacctttgacttttcgctcattcacaatcttgta 104734  T
Q  141 atgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    |||||  || |||||||| ||||||||||| |||||||| ||||  ||||||||  | |  |||||||| |||||||| |||| ||||||    
T  104735 atgagtcttagtatcctcctcataaatcctgcaactgctcaccagctcagaaaaagtacggatcttctggtaaccaattgcccgcttgat 104824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1600 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold1600
Description:

Target: scaffold1600; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 230
Target Start/End: Original strand, 468 - 664
Alignment:
Q  34 ggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatca 133  Q
    |||||| |||||||||||| ||| || ||||| || |||||||| || || || |||||    ||||| || || ||||| ||| | | ||||||||       
T  468 ggcctcctctcatcattcactctttgtttacccttatcagcaggagcgctgtaaggctttgggcgactttgctgacccttacctttcctctcactcacag 567  T
Q  134 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    |||||||||||||||| |||||||| ||||| |  || |||||||  |||| |||||||||||| |  ||||| ||||| ||||| ||| |||||||    
T  568 ccttgtaatgagctttagtatcctcctcatagactctgcaactgcacaccagttcagaaaagttacggatcttttgatatccaatggccatcttgat 664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 3808 - 3736
Alignment:
Q  20 catctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggctt 92  Q
    ||||||||||||| || ||| |||||||||||||||| || || || ||||||||||| |||||||| |||||    
T  3808 catctctcctcttaggtctcctctcatcattcaatctttgtttccccttgtcagcaggagcactatagggctt 3736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 7582 - 7542
Alignment:
Q  133 accttgtaatgagctttcgtatcctcttcataaatcctaca 173  Q
    ||||||||||||||| | |||||||||||||| ||||||||    
T  7582 accttgtaatgagctctggtatcctcttcatagatcctaca 7542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 230
Target Start/End: Original strand, 18347 - 18443
Alignment:
Q  134 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    |||||||||||||||| ||||| ||||||||||| || ||||| || ||||  ||| ||||||| |  |||||||| |||||||| |||| ||||||    
T  18347 ccttgtaatgagctttggtatcttcttcataaattctgcaactactcaccagctcaaaaaagttacggatcttctggtaaccaattgcccgcttgat 18443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 164
Target Start/End: Original strand, 3859 - 3953
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 164  Q
    ||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| |||||||||||||||||    
T  3859 tcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcata 3953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 15911 - 15996
Alignment:
Q  133 accttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaat 218  Q
    |||||||||||||| || |||||||| ||||| || || |||||||| ||||| |||||||| || |  |||||||| ||||||||    
T  15911 accttgtaatgagccttagtatcctcctcatagattctgcaactgctcaccaactcagaaaaattacggatcttctggtaaccaat 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 230
Target Start/End: Original strand, 26853 - 26950
Alignment:
Q  133 accttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    ||||||||||||||||||||||  || ||||| || || |||||||| |||| ||||||||| || |  ||||| | ||| ||||| |||||||||||    
T  26853 accttgtaatgagctttcgtatattcctcatagattctgcaactgctcaccagttcagaaaatttacgaatctttttatatccaatggccctcttgat 26950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000003; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 219
Target Start/End: Complemental strand, 9153 - 9068
Alignment:
Q  134 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaata 219  Q
    |||||||||||||||| ||||| || ||||| || || |||||||| |||| |||||||||||  |  ||||||||||| ||||||    
T  9153 ccttgtaatgagctttagtatcttcctcatagattctgcaactgctcaccagttcagaaaagtaacggatcttctgatacccaata 9068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 9286 - 9195
Alignment:
Q  1 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggctt 92  Q
    |||||||| ||||||| || |||| || |  | |||||| |||||||||||||||| || ||||| || |||||||| |||||||| |||||    
T  9286 caaacaatctcagtagtagtatctttctttctaggcctcctctcatcattcaatctttgtttacccttatcagcaggagcactataaggctt 9195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 230
Target Start/End: Complemental strand, 23100 - 23004
Alignment:
Q  134 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    |||||||||||||||| ||||| || ||||| ||  | || || || ||||| ||||||||||| |  ||||| ||||| ||||| |||||||||||    
T  23100 ccttgtaatgagctttagtatcttcctcatagattttgcagctactcaccaactcagaaaagttacggatcttttgatacccaatggccctcttgat 23004  T

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Target: scaffold0324 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 218
Target Start/End: Original strand, 2427 - 2575
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 169  Q
    |||||| ||||||| || |||||   |||||||||||| |||||| |  | |||||| |||  | |||||||||||  || |||||||| || |||||||    
T  2427 tcagcaagggcactgtaaggcttaggacgactctgttgacccttggcctttcgctcattcacaatcttgtaatgagtcttggtatcctcctcgtaaatcc 2526  T
Q  170 tacaactgcttaccaattcagaaaagtttcttatcttctgataaccaat 218  Q
    | |||||||| ||||  |||||||||  ||  |||||||| ||||||||    
T  2527 tgcaactgctcaccagctcagaaaagactcggatcttctggtaaccaat 2575  T

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Target: scaffold0947 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0947
Description:

Target: scaffold0947; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 233
Target Start/End: Complemental strand, 1307 - 1252
Alignment:
Q  178 cttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 233  Q
    ||||||||  |||| |||||||| ||||||||||||||||| || |||||||||||    
T  1307 cttaccaacccagagaagtttctaatcttctgataaccaatggctctcttgatgtc 1252  T

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Target: scaffold0403 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 184
Target Start/End: Original strand, 15349 - 15463
Alignment:
Q  70 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 169  Q
    ||||||||||||||||| |||||    ||||||||||| |||||  || | |||||| |||  | |||||||||||  || |||||||| ||||| ||||    
T  15349 tcagcaggggcactataaggcttagggcgactctgttgacccttagctttccgctcattcacaatcttgtaatgagtcttggtatcctcctcatagatcc 15448  T
Q  170 tacaactgcttacca 184  Q
    | |||||||| ||||    
T  15449 tgcaactgctcacca 15463  T

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Target: scaffold0395 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 16306 - 16232
Alignment:
Q  153 atcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctctt 227  Q
    |||||| || |||||||| |||||||| ||||  |||||||||||||  |||||||| |||||||| || |||||    
T  16306 atcctcctcgtaaatcctgcaactgctcaccagctcagaaaagtttcgaatcttctggtaaccaattgctctctt 16232  T

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Target: scaffold0273 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 191
Target Start/End: Original strand, 541 - 599
Alignment:
Q  133 accttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcaga 191  Q
    |||||||||||||| || || ||||| ||||||||||| |||||||| ||||| |||||    
T  541 accttgtaatgagccttagtgtcctcctcataaatcctgcaactgctcaccaactcaga 599  T

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Target: scaffold0075 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 195
Target Start/End: Original strand, 48159 - 48293
Alignment:
Q  61 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 160  Q
    ||||| || |||||||| ||||| || |||||   ||||||||| || || ||| || | |||||| |||  | |||||||||||  || |||||||| |    
T  48159 ttacccttatcagcaggagcactgtaaggcttaggacgactctgctgacctttggcttttcgctcattcacaatcttgtaatgagtcttggtatcctcct 48258  T
Q  161 cataaatcctacaactgcttaccaattcagaaaag 195  Q
    ||||||| || |||||||| ||||| |||||||||    
T  48259 cataaattctgcaactgctcaccaactcagaaaag 48293  T

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Target: scaffold0075; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 55272 - 55212
Alignment:
Q  135 cttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaag 195  Q
    |||||||||||  || |||||||| |||||||| || |||||||| ||||| |||||||||    
T  55272 cttgtaatgagtcttggtatcctcctcataaattctgcaactgctcaccaactcagaaaag 55212  T

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Target: scaffold1423 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 179 - 130
Alignment:
Q  135 cttgtaatgagctttcgtatcctcttcataaatcctacaactgcttacca 184  Q
    |||||||||||| || |||||||| ||||||||||| |||||||| ||||    
T  179 cttgtaatgagccttagtatcctcatcataaatcctgcaactgctcacca 130  T

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Target: scaffold0605 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 188
Target Start/End: Original strand, 1775 - 1836
Alignment:
Q  127 ctcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattc 188  Q
    ||||||||||| |||||||| || |||||||| |||||||| ||||| || || ||||||||    
T  1775 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaattc 1836  T

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Target: scaffold0342 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 230
Target Start/End: Complemental strand, 14167 - 13971
Alignment:
Q  34 ggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatca 133  Q
    ||||||||||||||||| | ||| || || || || ||| |||| ||||| || |||||   |||||| || || ||||||||| | | |||| |||  |    
T  14167 ggcctcttctcatcatttattctttgttttcccttatcatcaggagcactgtaaggctttggacgactttgctgacccttgcctttcctctcattcacaa 14068  T
Q  134 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 230  Q
    ||||||||||||| || ||||| || ||||| || || |||||||| ||||  | |||||||||    ||||| || |||||||| |||| ||||||    
T  14067 ccttgtaatgagccttagtatcttcctcatatattctgcaactgctcaccagcttagaaaagttatggatcttttggtaaccaattgcccgcttgat 13971  T

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