View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10197_low_42 (Length: 242)
Name: NF10197_low_42
Description: NF10197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10197_low_42 |
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Alignment Details
Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 15154956 - 15155029
Alignment:
| Q |
166 |
ggaaaagtaatgctccttcatgttgtttttataaaagacatataaatcaacaaaagtgaatatatatgattcat |
239 |
Q |
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| T |
15154956 |
ggaaaagtaatactccttcatgttctttttataaaagacatataaatcaacaaaagtgaatatatatgattcat |
15155029 |
T |
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Target: chr8; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 15154802 - 15154878
Alignment:
| Q |
15 |
ggatatcaatagaataattctattaacttatagttttcattgtataggtttaatttaattaaaagtttaagatcgatag |
93 |
Q |
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|||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
15154802 |
ggatatcaatagaataattctattaactta--gttttcattatataggtttaatttaattaaaagtttaagatcgatag |
15154878 |
T |
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