View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10198_high_2 (Length: 570)
Name: NF10198_high_2
Description: NF10198
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10198_high_2 |
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Alignment Details
Target: chr8 (Bit Score: 531; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 531; E-Value: 0
Query Start/End: Original strand, 1 - 535
Target Start/End: Complemental strand, 37696724 - 37696190
Alignment:
| Q |
1 |
aaaagaagtgtcacaaatggttgaactttttacttggcaatagaggaggatgaaagtggaggaagatatttggaatggtgcagttaaatctatgccaaag |
100 |
Q |
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| T |
37696724 |
aaaagaagtgtcacaaatggttgaactttttacttggcaatggaggaggatgaaagtggaggaagatatttggaatggtgcagttaaatctatgccaaag |
37696625 |
T |
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| Q |
101 |
tttggtgaggtttgcatggtagtgcaagtagacatgtagggtggtgtgagtattagagtggaagtggtgtatgaaatggaggttatagggtatgaggatg |
200 |
Q |
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| T |
37696624 |
tttggtgaggtttgcatggtagtgcaagtagacatgtagggtggtgtgagtattagagtggaagtggtgtatgaaatggaggttatagggtatgaggatg |
37696525 |
T |
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| Q |
201 |
tgtgagttttgaggatgagttggtctaatgttccatttgatgtgcatgttatgtatgggttgaatagtggggacccgcaaccaggacctgtgccaaaggg |
300 |
Q |
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| T |
37696524 |
tgtgagttttgaggatgagttggtctaatgttccatttgatgtgcatgttatgtatgggttgaatagtggggacccgcaaccaggacctgtgccaaaggg |
37696425 |
T |
|
| Q |
301 |
atacttgacttgtattgagccacatgtgtcatggcacactggtgtcgaggctgttggtggcgatgctaagaggaggatcatgaaaaagttgaggagggtg |
400 |
Q |
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| T |
37696424 |
atacttgacttgtattgagccacatgtgtcatggcacactggtgtcgaggctgttggtggcgatgctaagaggaggatcatgaaaaagttgaggagggtg |
37696325 |
T |
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| Q |
401 |
gaaagaggtggtggtagtgccattgctttgcttgtttcctctttttggtttcaccttccactctttgaggcttagagctggtggatgaaaaattgatgct |
500 |
Q |
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| T |
37696324 |
gaaagaggtggtggtagtgccattgctttgcttgtttcctctttttggtttcaccttccactctttgaggcttagagctggtggatgaaaaattgatgct |
37696225 |
T |
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| Q |
501 |
tgattgatgttaagaatatattctctttaatgtaa |
535 |
Q |
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| T |
37696224 |
tgattgatgttaagaatatattctctttaatgtaa |
37696190 |
T |
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