View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10200_low_3 (Length: 583)

Name: NF10200_low_3
Description: NF10200
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10200_low_3
NF10200_low_3
[»] chr4 (77 HSPs)
chr4 (262-499)||(18100240-18100478)
chr4 (18-262)||(24807408-24807653)
chr4 (19-261)||(23985759-23986002)
chr4 (19-261)||(52545106-52545347)
chr4 (56-261)||(3529187-3529393)
chr4 (20-207)||(51295202-51295391)
chr4 (120-247)||(7040360-7040488)
chr4 (120-247)||(23564779-23564907)
chr4 (148-247)||(52518758-52518858)
chr4 (148-247)||(52520600-52520700)
chr4 (499-578)||(27149343-27149422)
chr4 (120-247)||(23566453-23566581)
chr4 (499-578)||(3032581-3032661)
chr4 (152-247)||(18656107-18656203)
chr4 (499-578)||(54858907-54858987)
chr4 (499-583)||(52573570-52573655)
chr4 (499-578)||(27069257-27069337)
chr4 (496-579)||(52573224-52573308)
chr4 (499-578)||(54858559-54858639)
chr4 (500-578)||(10408236-10408315)
chr4 (496-578)||(27068906-27068989)
chr4 (123-207)||(8005832-8005917)
chr4 (502-578)||(45463075-45463152)
chr4 (497-577)||(51859754-51859835)
chr4 (148-220)||(54296454-54296527)
chr4 (499-574)||(22987202-22987278)
chr4 (500-578)||(10407889-10407968)
chr4 (498-578)||(39701256-39701337)
chr4 (498-578)||(50504172-50504253)
chr4 (20-131)||(5653176-5653288)
chr4 (503-574)||(11523952-11524024)
chr4 (503-574)||(22717942-22718014)
chr4 (503-574)||(45463424-45463496)
chr4 (198-261)||(18395817-18395880)
chr4 (498-578)||(16605600-16605681)
chr4 (498-578)||(27891582-27891663)
chr4 (498-574)||(39700907-39700984)
chr4 (503-578)||(5818122-5818198)
chr4 (28-132)||(42665048-42665152)
chr4 (499-578)||(50503824-50503904)
chr4 (498-577)||(51203607-51203687)
chr4 (176-247)||(3274601-3274672)
chr4 (120-204)||(6732665-6732747)
chr4 (210-261)||(18320063-18320114)
chr4 (210-261)||(18398569-18398620)
chr4 (495-577)||(32950461-32950544)
chr4 (499-577)||(34837073-34837152)
chr4 (495-577)||(34837393-34837476)
chr4 (499-577)||(42738350-42738429)
chr4 (500-577)||(9400519-9400597)
chr4 (500-577)||(38012489-38012567)
chr4 (496-569)||(50751856-50751929)
chr4 (499-575)||(22567107-22567184)
chr4 (497-577)||(42738028-42738109)
chr4 (507-577)||(9144773-9144844)
chr4 (499-577)||(9145085-9145164)
chr4 (499-577)||(27934531-27934610)
chr4 (499-577)||(32950141-32950220)
chr4 (502-572)||(39666772-39666843)
chr4 (503-573)||(50750890-50750961)
chr4 (500-577)||(4982726-4982804)
chr4 (521-583)||(15508017-15508079)
chr4 (521-578)||(23613330-23613388)
chr4 (521-578)||(24711132-24711190)
chr4 (521-578)||(34765729-34765787)
chr4 (521-578)||(37248257-37248315)
chr4 (500-577)||(38012170-38012248)
chr4 (521-577)||(33247295-33247352)
chr4 (502-577)||(9400838-9400914)
chr4 (22-137)||(18395649-18395764)
chr4 (521-575)||(27934839-27934894)
chr4 (500-577)||(4983045-4983123)
chr4 (521-578)||(5368968-5369026)
chr4 (521-578)||(7451855-7451913)
chr4 (521-578)||(44967387-44967445)
chr4 (507-578)||(6237169-6237241)
chr4 (503-570)||(39667131-39667199)
[»] chr2 (40 HSPs)
chr2 (262-499)||(37857848-37858086)
chr2 (120-247)||(29758119-29758247)
chr2 (499-578)||(8710815-8710895)
chr2 (500-578)||(28226091-28226170)
chr2 (499-578)||(15604338-15604418)
chr2 (123-187)||(25302758-25302823)
chr2 (498-578)||(6573045-6573126)
chr2 (498-578)||(6573541-6573622)
chr2 (123-187)||(25306753-25306818)
chr2 (501-578)||(41588405-41588483)
chr2 (133-187)||(41602398-41602452)
chr2 (498-577)||(8342185-8342265)
chr2 (503-578)||(15604686-15604762)
chr2 (501-578)||(11830365-11830443)
chr2 (497-577)||(13995670-13995751)
chr2 (498-577)||(13995992-13996072)
chr2 (499-577)||(1695739-1695818)
chr2 (499-577)||(33062049-33062128)
chr2 (499-577)||(33062369-33062448)
chr2 (499-577)||(33739702-33739781)
chr2 (497-577)||(33740022-33740103)
chr2 (503-578)||(8342526-8342602)
chr2 (500-578)||(25892394-25892473)
chr2 (498-577)||(41248878-41248958)
chr2 (499-577)||(14900800-14900879)
chr2 (520-578)||(16099075-16099134)
chr2 (521-578)||(11163372-11163430)
chr2 (498-575)||(14900494-14900572)
chr2 (521-578)||(44714110-44714168)
chr2 (509-578)||(39936596-39936665)
chr2 (498-577)||(41248557-41248637)
chr2 (499-570)||(41587234-41587305)
chr2 (507-577)||(1696059-1696130)
chr2 (187-254)||(18739664-18739730)
chr2 (521-578)||(15848109-15848167)
chr2 (531-583)||(6577621-6577674)
chr2 (521-577)||(45556133-45556190)
chr2 (526-573)||(202710-202758)
chr2 (178-218)||(20516116-20516156)
chr2 (496-579)||(28228666-28228750)
[»] chr6 (45 HSPs)
chr6 (31-261)||(14611069-14611299)
chr6 (19-197)||(14618973-14619151)
chr6 (19-261)||(15868377-15868621)
chr6 (19-261)||(33869231-33869475)
chr6 (19-261)||(33866084-33866328)
chr6 (19-261)||(15866565-15866809)
chr6 (163-261)||(32079895-32079993)
chr6 (20-163)||(32080021-32080163)
chr6 (137-261)||(14620496-14620610)
chr6 (78-247)||(5376876-5377047)
chr6 (78-247)||(5378731-5378902)
chr6 (500-578)||(6517503-6517582)
chr6 (496-578)||(22502770-22502853)
chr6 (499-577)||(22503122-22503201)
chr6 (148-245)||(1088785-1088883)
chr6 (498-579)||(7160802-7160884)
chr6 (501-578)||(7905244-7905322)
chr6 (503-578)||(21836035-21836110)
chr6 (496-578)||(21836377-21836460)
chr6 (151-247)||(15149180-15149277)
chr6 (503-578)||(31407225-31407301)
chr6 (120-247)||(19645404-19645532)
chr6 (500-576)||(31406878-31406955)
chr6 (498-578)||(32593488-32593569)
chr6 (495-578)||(10781142-10781226)
chr6 (496-578)||(7161151-7161234)
chr6 (498-578)||(15913546-15913627)
chr6 (503-578)||(7905590-7905666)
chr6 (499-577)||(14196614-14196693)
chr6 (500-577)||(363149-363227)
chr6 (496-577)||(25485949-25486031)
chr6 (501-577)||(14196934-14197011)
chr6 (148-219)||(9415095-9415167)
chr6 (499-577)||(362869-362948)
chr6 (496-566)||(15913907-15913978)
chr6 (499-577)||(22373007-22373086)
chr6 (497-578)||(12065217-12065298)
chr6 (521-578)||(30337470-30337528)
chr6 (183-247)||(28884423-28884487)
chr6 (499-577)||(28000704-28000783)
chr6 (521-578)||(3059278-3059336)
chr6 (496-569)||(28000381-28000455)
chr6 (509-573)||(28498379-28498444)
chr6 (521-573)||(30337772-30337825)
chr6 (541-578)||(33517576-33517613)
[»] chr1 (63 HSPs)
chr1 (26-253)||(902070-902298)
chr1 (19-261)||(3284487-3284731)
chr1 (19-261)||(3282786-3283030)
chr1 (19-261)||(9312014-9312258)
chr1 (19-262)||(9310396-9310641)
chr1 (156-261)||(37664695-37664801)
chr1 (156-261)||(37674417-37674523)
chr1 (156-261)||(37702171-37702277)
chr1 (498-578)||(40714790-40714871)
chr1 (123-204)||(33773132-33773214)
chr1 (148-247)||(16808711-16808811)
chr1 (148-247)||(17449310-17449410)
chr1 (495-578)||(40714439-40714523)
chr1 (82-261)||(5924852-5925020)
chr1 (500-578)||(17188954-17189033)
chr1 (500-578)||(17189198-17189277)
chr1 (499-578)||(28324804-28324883)
chr1 (496-578)||(31050946-31051029)
chr1 (500-578)||(49955347-49955426)
chr1 (496-578)||(49955694-49955777)
chr1 (498-579)||(45750188-45750270)
chr1 (498-578)||(12906006-12906087)
chr1 (498-578)||(37929416-37929497)
chr1 (499-578)||(20760852-20760932)
chr1 (499-579)||(8898516-8898597)
chr1 (503-578)||(35040961-35041037)
chr1 (500-578)||(30326496-30326575)
chr1 (497-578)||(28325151-28325232)
chr1 (499-562)||(25885356-25885420)
chr1 (499-578)||(31058404-31058484)
chr1 (499-578)||(45749841-45749921)
chr1 (499-577)||(28011687-28011766)
chr1 (499-578)||(8898864-8898944)
chr1 (498-577)||(24905165-24905245)
chr1 (198-247)||(48940675-48940724)
chr1 (497-577)||(52134065-52134146)
chr1 (502-577)||(33442913-33442989)
chr1 (499-565)||(7371529-7371596)
chr1 (496-578)||(23209676-23209759)
chr1 (521-578)||(6367583-6367641)
chr1 (496-546)||(25884697-25884747)
chr1 (497-578)||(32558454-32558536)
chr1 (500-577)||(33442594-33442672)
chr1 (521-578)||(34464470-34464528)
chr1 (500-577)||(52134387-52134465)
chr1 (541-578)||(13914416-13914453)
chr1 (502-578)||(44523485-44523562)
chr1 (495-578)||(34464798-34464882)
chr1 (507-569)||(4716475-4716538)
chr1 (520-578)||(26024443-26024502)
chr1 (507-577)||(31514636-31514707)
chr1 (208-255)||(36580553-36580600)
chr1 (521-578)||(7820975-7821033)
chr1 (521-578)||(14878992-14879050)
chr1 (521-578)||(25647905-25647963)
chr1 (498-579)||(35038453-35038535)
chr1 (521-573)||(13914089-13914142)
chr1 (541-578)||(19017978-19018015)
chr1 (521-573)||(35473652-35473705)
chr1 (498-578)||(41098731-41098812)
chr1 (541-578)||(46163072-46163109)
chr1 (498-577)||(7371288-7371368)
chr1 (78-130)||(10653604-10653656)
[»] chr7 (58 HSPs)
chr7 (19-261)||(37405452-37405696)
chr7 (19-191)||(34844107-34844282)
chr7 (148-247)||(28124720-28124820)
chr7 (148-247)||(28126547-28126647)
chr7 (148-247)||(4895583-4895683)
chr7 (495-578)||(43266613-43266697)
chr7 (148-247)||(44963162-44963262)
chr7 (496-578)||(43266262-43266345)
chr7 (78-247)||(20046557-20046729)
chr7 (499-579)||(32934694-32934775)
chr7 (498-578)||(42618258-42618339)
chr7 (503-578)||(32068099-32068175)
chr7 (500-578)||(25453128-25453207)
chr7 (500-578)||(42617911-42617990)
chr7 (490-578)||(10600296-10600385)
chr7 (503-583)||(46204424-46204505)
chr7 (499-578)||(23058776-23058856)
chr7 (503-578)||(25628481-25628557)
chr7 (499-578)||(27138288-27138368)
chr7 (503-578)||(28890582-28890658)
chr7 (20-131)||(29597976-29598088)
chr7 (500-578)||(32068443-32068522)
chr7 (496-578)||(33828321-33828404)
chr7 (502-578)||(25628825-25628902)
chr7 (500-575)||(10600026-10600102)
chr7 (136-204)||(30511088-30511156)
chr7 (498-577)||(32680914-32680994)
chr7 (500-578)||(22081560-22081638)
chr7 (500-578)||(22081906-22081985)
chr7 (199-261)||(25471955-25472017)
chr7 (500-583)||(23058429-23058513)
chr7 (503-578)||(32934351-32934427)
chr7 (498-577)||(34928969-34929049)
chr7 (498-577)||(39686853-39686933)
chr7 (499-577)||(30948479-30948558)
chr7 (499-577)||(34928649-34928728)
chr7 (498-578)||(25453475-25453556)
chr7 (497-577)||(32680592-32680673)
chr7 (509-569)||(32688576-32688637)
chr7 (521-578)||(6253492-6253550)
chr7 (521-578)||(10935815-10935873)
chr7 (521-578)||(17102041-17102099)
chr7 (30-131)||(21631243-21631345)
chr7 (521-578)||(32299054-32299112)
chr7 (521-578)||(42731440-42731498)
chr7 (522-578)||(23181343-23181400)
chr7 (498-578)||(39274868-39274949)
chr7 (20-120)||(9878133-9878233)
chr7 (22-105)||(21633196-21633279)
chr7 (507-577)||(30948167-30948238)
chr7 (499-577)||(39686533-39686612)
chr7 (509-578)||(13050130-13050200)
chr7 (521-578)||(22871626-22871684)
chr7 (521-578)||(27991760-27991818)
chr7 (521-578)||(28469357-28469415)
chr7 (120-190)||(4571066-4571139)
chr7 (20-131)||(21632964-21633076)
chr7 (496-575)||(27396947-27397027)
[»] scaffold0251 (1 HSPs)
scaffold0251 (19-261)||(6211-6455)
[»] scaffold0006 (3 HSPs)
scaffold0006 (120-261)||(39130-39271)
scaffold0006 (496-578)||(222136-222219)
scaffold0006 (503-578)||(221794-221869)
[»] chr5 (41 HSPs)
chr5 (19-261)||(39787061-39787305)
chr5 (498-578)||(17544395-17544476)
chr5 (500-578)||(8875449-8875528)
chr5 (506-574)||(8875618-8875687)
chr5 (498-566)||(20153274-20153343)
chr5 (499-578)||(33871685-33871765)
chr5 (500-578)||(20152781-20152860)
chr5 (500-578)||(33871339-33871418)
chr5 (150-255)||(25076250-25076356)
chr5 (150-255)||(25134219-25134325)
chr5 (497-577)||(1505964-1506045)
chr5 (522-578)||(22298564-22298621)
chr5 (499-565)||(3656778-3656845)
chr5 (499-577)||(31482721-31482800)
chr5 (497-570)||(297011-297085)
chr5 (500-577)||(31482402-31482480)
chr5 (521-577)||(6757886-6757943)
chr5 (507-577)||(1506286-1506357)
chr5 (500-574)||(21288008-21288083)
chr5 (521-578)||(11761770-11761828)
chr5 (521-578)||(27587169-27587227)
chr5 (521-578)||(29646711-29646768)
chr5 (507-577)||(297333-297404)
chr5 (499-577)||(6758184-6758263)
chr5 (70-132)||(33689981-33690044)
chr5 (499-577)||(41930515-41930594)
chr5 (503-577)||(41930835-41930910)
chr5 (521-578)||(3529191-3529249)
chr5 (521-578)||(5993910-5993968)
chr5 (521-578)||(24547474-24547532)
chr5 (521-578)||(28771187-28771245)
chr5 (521-578)||(35512169-35512227)
chr5 (521-578)||(38475348-38475406)
chr5 (521-578)||(39453321-39453379)
chr5 (154-187)||(8080966-8080999)
chr5 (522-578)||(13362577-13362634)
chr5 (541-578)||(16083019-16083056)
chr5 (509-573)||(24141461-24141526)
chr5 (522-578)||(30005175-30005232)
chr5 (522-578)||(24204947-24205003)
chr5 (509-568)||(40150173-40150233)
[»] scaffold0057 (1 HSPs)
scaffold0057 (20-262)||(58770-59012)
[»] chr8 (61 HSPs)
chr8 (159-262)||(14935561-14935664)
chr8 (120-247)||(30224229-30224357)
chr8 (151-247)||(3375558-3375655)
chr8 (503-578)||(25124566-25124642)
chr8 (498-578)||(7983426-7983507)
chr8 (152-247)||(5567425-5567521)
chr8 (148-247)||(6428739-6428839)
chr8 (500-578)||(15229931-15230010)
chr8 (498-578)||(10445682-10445763)
chr8 (498-578)||(35634446-35634527)
chr8 (503-579)||(42945460-42945537)
chr8 (500-577)||(44664508-44664586)
chr8 (498-578)||(234087-234168)
chr8 (498-578)||(710498-710579)
chr8 (498-578)||(747710-747791)
chr8 (498-578)||(871605-871686)
chr8 (159-247)||(3379257-3379346)
chr8 (502-578)||(8998036-8998113)
chr8 (502-578)||(44664855-44664932)
chr8 (503-578)||(8997859-8997935)
chr8 (150-247)||(31032137-31032231)
chr8 (503-578)||(37542227-37542303)
chr8 (496-578)||(6471686-6471769)
chr8 (498-578)||(23505050-23505131)
chr8 (148-247)||(25249002-25249105)
chr8 (498-577)||(11675013-11675093)
chr8 (499-578)||(15230278-15230358)
chr8 (503-578)||(38003753-38003829)
chr8 (499-578)||(41353920-41354000)
chr8 (496-578)||(23507774-23507857)
chr8 (500-578)||(25124910-25124989)
chr8 (496-577)||(3041775-3041857)
chr8 (496-577)||(38845618-38845700)
chr8 (155-218)||(36535971-36536035)
chr8 (499-577)||(2266811-2266890)
chr8 (495-577)||(11674690-11674773)
chr8 (521-578)||(40318313-40318371)
chr8 (497-577)||(35449928-35450009)
chr8 (497-577)||(44406854-44406935)
chr8 (500-544)||(6472397-6472441)
chr8 (499-577)||(2266491-2266570)
chr8 (507-577)||(3041463-3041534)
chr8 (521-578)||(8316937-8316995)
chr8 (521-578)||(16388875-16388933)
chr8 (503-579)||(27500092-27500169)
chr8 (107-159)||(14939603-14939654)
chr8 (503-578)||(41353577-41353653)
chr8 (503-577)||(36325553-36325628)
chr8 (507-577)||(38845306-38845377)
chr8 (499-577)||(40775649-40775728)
chr8 (521-578)||(4995006-4995063)
chr8 (509-578)||(10749857-10749927)
chr8 (521-578)||(23663863-23663921)
chr8 (521-578)||(23698593-23698651)
chr8 (521-578)||(39071697-39071755)
chr8 (500-569)||(40775977-40776047)
chr8 (500-577)||(44407176-44407254)
chr8 (502-578)||(21432695-21432772)
chr8 (541-578)||(22915707-22915744)
chr8 (176-217)||(29274808-29274849)
chr8 (523-578)||(2535899-2535955)
[»] chr3 (55 HSPs)
chr3 (132-204)||(41874441-41874513)
chr3 (78-247)||(17402844-17403015)
chr3 (499-579)||(40788766-40788847)
chr3 (496-578)||(13948776-13948859)
chr3 (123-187)||(35244113-35244178)
chr3 (499-578)||(3469199-3469279)
chr3 (503-578)||(32306771-32306847)
chr3 (499-578)||(37778620-37778700)
chr3 (496-578)||(3469547-3469630)
chr3 (78-235)||(6789631-6789788)
chr3 (499-583)||(29118880-29118965)
chr3 (499-579)||(33506296-33506377)
chr3 (123-187)||(35243935-35244000)
chr3 (499-578)||(32306423-32306503)
chr3 (499-574)||(52032490-52032566)
chr3 (500-573)||(42855659-42855733)
chr3 (502-578)||(29118529-29118606)
chr3 (502-578)||(29686287-29686364)
chr3 (503-578)||(3596112-3596188)
chr3 (502-577)||(29685943-29686019)
chr3 (499-578)||(47551492-47551572)
chr3 (500-578)||(10294567-10294646)
chr3 (496-578)||(11910695-11910778)
chr3 (521-578)||(35643872-35643930)
chr3 (496-577)||(36314294-36314376)
chr3 (497-578)||(52032135-52032217)
chr3 (498-578)||(33156343-33156424)
chr3 (495-577)||(8041611-8041694)
chr3 (496-577)||(10770486-10770568)
chr3 (499-578)||(10294906-10294986)
chr3 (502-573)||(33506180-33506252)
chr3 (496-578)||(41421968-41422051)
chr3 (521-578)||(2796200-2796258)
chr3 (496-569)||(4322588-4322661)
chr3 (495-544)||(13949077-13949126)
chr3 (497-577)||(48322696-48322777)
chr3 (498-577)||(8041935-8042015)
chr3 (498-577)||(48322375-48322455)
chr3 (503-573)||(4323556-4323627)
chr3 (114-234)||(20327181-20327304)
chr3 (500-577)||(36314617-36314695)
chr3 (496-577)||(54466419-54466501)
chr3 (522-578)||(33689728-33689785)
chr3 (498-578)||(40788418-40788499)
chr3 (148-195)||(1140052-1140100)
chr3 (498-577)||(10770810-10770890)
chr3 (72-131)||(9032760-9032819)
chr3 (114-234)||(20302639-20302760)
chr3 (507-577)||(54466742-54466813)
chr3 (521-578)||(9294307-9294365)
chr3 (521-578)||(19741241-19741299)
chr3 (521-578)||(40758168-40758225)
chr3 (541-578)||(10307722-10307759)
chr3 (523-578)||(21186044-21186100)
chr3 (523-578)||(23276332-23276388)
[»] scaffold0771 (2 HSPs)
scaffold0771 (496-578)||(916-999)
scaffold0771 (495-544)||(1217-1266)
[»] scaffold0328 (2 HSPs)
scaffold0328 (498-578)||(11487-11568)
scaffold0328 (498-578)||(11138-11219)
[»] scaffold0388 (1 HSPs)
scaffold0388 (495-578)||(12586-12670)
[»] scaffold0599 (1 HSPs)
scaffold0599 (496-578)||(2389-2472)
[»] scaffold0205 (1 HSPs)
scaffold0205 (499-577)||(21008-21087)
[»] scaffold0042 (1 HSPs)
scaffold0042 (502-578)||(12127-12204)
[»] scaffold0024 (2 HSPs)
scaffold0024 (498-577)||(141913-141993)
scaffold0024 (498-577)||(141592-141672)
[»] scaffold0031 (1 HSPs)
scaffold0031 (521-578)||(68986-69044)
[»] scaffold0020 (1 HSPs)
scaffold0020 (521-578)||(139693-139751)
[»] scaffold0559 (1 HSPs)
scaffold0559 (500-569)||(1233-1303)


Alignment Details
Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 262 - 499
Target Start/End: Original strand, 18100240 - 18100478
Alignment:
Q  262 ccactcaacaatcaaaatcggacattaacttaatgtatctttggtattaagtatcgcaatggaattgtacaaaatcaca-tggttcaccgtaattttagc 360  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18100240 ccactcaacaatcaaaatcggacattaacttaatgtatgtttggtattaagtatcgcaatggaattgtacaaaatcacagtggttcaccgtaattttagc 18100339  T
Q  361 acatctatctagagtaataccaaaaatgtggtggtgcattttgattttcacaattctagtgtcaattcaaacatgtactaagataatgacaaaaaatata 460  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18100340 acatctatctagagtaataccaaaaatgtgatggtgcattttgattttcacaattctagtgtcaattcaaacatgtactaagataatgacaaaaaatata 18100439  T
Q  461 tgttacgggtgggactttcgatcatgttcaattgattta 499  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  18100440 tgttatgggtgagactttcgatcatgttcaattgattta 18100478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 18 - 262
Target Start/End: Complemental strand, 24807653 - 24807408
Alignment:
Q  18 caggaatcccaaggataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatcaatag 117  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||| |||||||||||    
T  24807653 caggaatcccaaggataaagatcatagatattagctagagagagagcatagtagtattcatgtgggagatatccatagagactcataggagaatcaatag 24807554  T
Q  118 atttgataaaagat-attgaaatgatacatgagtgttcctatatatagagtttagttgtgtaactaactctaactaactcttaaccaagctactaactct 216  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  24807553 atttgataaaagatgattgaaatgatacatgagtgttcctatatatagattttagttgtgtaactaactcttcctaactcttaaccaagcttctaactct 24807454  T
Q  217 agtttacctatcaactaaccatagttgattattcatactctaatac 262  Q
    | ||||||||||||||||| ||||||||||||||||||||||||||    
T  24807453 aatttacctatcaactaactatagttgattattcatactctaatac 24807408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 23986002 - 23985759
Alignment:
Q  19 aggaatcccaaggataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatcaataga 118  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||||||||||    
T  23986002 aggaatcccaaggataaagatcatagacatcagctagagagagagcatagtaatattcatgtgggagataaccatagagactcataggagaatcaataga 23985903  T
Q  119 tttgataaaagatattgaaatga-tacatgagtgttcctatatatagagtttag-ttgtgtaactaactctaactaactcttaaccaagctactaactct 216  Q
    |||||||||||||  || ||||| ||||  ||||||||||||||||||| |||| |||  |||||||||||||||||||  |||||||||||||||||||    
T  23985902 tttgataaaagatggtg-aatgagtacaatagtgttcctatatatagagattagtttgaataactaactctaactaacttctaaccaagctactaactct 23985804  T
Q  217 agtttacctatcaactaaccatagttgattattcatactctaata 261  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  23985803 agtttacctatcaactaactatagttgattattcatactctaata 23985759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 52545106 - 52545347
Alignment:
Q  19 aggaatcccaaggataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatcaataga 118  Q
    ||||||||||||||||||||| ||||  |||||| ||| || |||| ||  |||| || |||||||||||  |||||| ||||||   ||||| ||||||    
T  52545106 aggaatcccaaggataaagatcatagtgatcagcaagaaagcgagcataagagtactcatgtgggagatactcatagaaactcattatagaatgaataga 52545205  T
Q  119 tttgataaaagatattgaaatgatacatgagtgttcctatatatagagtttagttgtgtaactaactctaactaactcttaaccaagctactaactctag 218  Q
    || ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||    
T  52545206 tt-gataaaagataataaaatgatacatgagtgttcctatatatagagtttagttgtgtaactaactctaaccaacttctaaccaagctactaactctag 52545304  T
Q  219 tttacctatcaactaaccatagttgattattcatactctaata 261  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  52545305 tttacctatcaactaactatagttgattattcatactctaata 52545347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 56 - 261
Target Start/End: Original strand, 3529187 - 3529393
Alignment:
Q  56 agagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatcaatagatttgataaaagatattgaaatga-tacatgagtgttc 154  Q
    ||||||||| ||||||||||| ||||| | |||||||||||||||||||| |||||||||||||||||||||||||| |||| ||| ||||  |||||||    
T  3529187 agagagagcatagtagtattcatgtggaaaataaccatagagactcataggagaatcaatagatttgataaaagataatgaa-tgagtacaatagtgttc 3529285  T
Q  155 ctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgattattcata 253  Q
    |||||||||||| |||||| | ||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||| | |||||||||||||||    
T  3529286 ctatatatagagattagtttgagtaactaactctaactaacttctaaccaagctactaactttagtttacctatcaactaactacagttgattattcata 3529385  T
Q  254 ctctaata 261  Q
    ||||||||    
T  3529386 ctctaata 3529393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 20 - 207
Target Start/End: Complemental strand, 51295391 - 51295202
Alignment:
Q  20 ggaatcccaaggataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatcaa-taga 118  Q
    ||||||| |||||||||||| ||||  |||||||||| ||||||| |||  |||||| ||||||||||| |||||| ||||||||  ||| | || ||||    
T  51295391 ggaatcctaaggataaagatcatagtgatcagctagaaagagagcataggtgtattcatgtgggagatatccatagtgactcataatagagtaaactaga 51295292  T
Q  119 tttgataaaagatatt-gaaatgatacatgagtgttcctatatatagagtttagttgtgtaactaactctaactaactcttaaccaagct 207  Q
    ||||||||||| || | |||||||| ||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  51295291 tttgataaaaggtagtagaaatgatgcattagtgttcctatatataatgtttagttgtgtaactaactctaactaactcttaaccaagct 51295202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 120 - 247
Target Start/End: Complemental strand, 7040488 - 7040360
Alignment:
Q  120 ttgataaaagatattgaaatga-tacatgagtgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactcta 217  Q
    ||||||||||||| |||| ||| ||||  ||||||||||||||||||| |||||| | ||||||| ||||||||||||  ||||||||||||||||||||    
T  7040488 ttgataaaagataatgaa-tgagtacaatagtgttcctatatatagagattagtttgagtaactacctctaactaacttctaaccaagctactaactcta 7040390  T
Q  218 gtttacctatcaactaaccatagttgatta 247  Q
    |||||| ||||||||||| |||||||||||    
T  7040389 gtttacttatcaactaactatagttgatta 7040360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 120 - 247
Target Start/End: Original strand, 23564779 - 23564907
Alignment:
Q  120 ttgataaaagatattgaaatga-tacatgagtgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactcta 217  Q
    ||||||||||||| |||| ||| ||||  ||||||||||||||||||| |||||| | ||||||| ||||||||||||  ||||||||||||||||||||    
T  23564779 ttgataaaagataatgaa-tgagtacaatagtgttcctatatatagagattagtttgagtaactacctctaactaacttctaaccaagctactaactcta 23564877  T
Q  218 gtttacctatcaactaaccatagttgatta 247  Q
    |||||| ||||||||||| |||||||||||    
T  23564878 gtttacttatcaactaactatagttgatta 23564907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 52518858 - 52518758
Alignment:
Q  148 agtgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgatt 246  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||||||  ||||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  52518858 agtgttcctatatatagagattagtttgagtaactaactctaactaacttctaaccaaactactaactctagtttacttatcaactaactatagttgatt 52518759  T
Q  247 a 247  Q
    |    
T  52518758 a 52518758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 52520700 - 52520600
Alignment:
Q  148 agtgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgatt 246  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||||||  ||||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  52520700 agtgttcctatatatagagattagtttgagtaactaactctaactaacttctaaccaaactactaactctagtttacttatcaactaactatagttgatt 52520601  T
Q  247 a 247  Q
    |    
T  52520600 a 52520600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 499 - 578
Target Start/End: Complemental strand, 27149422 - 27149343
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  27149422 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaattagtccctgtaattgctaatcctggcaatttac 27149343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 120 - 247
Target Start/End: Original strand, 23566453 - 23566581
Alignment:
Q  120 ttgataaaagatattgaaatga-tacatgagtgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactcta 217  Q
    ||||||||||||| |||| ||| ||||  ||||||||||||||||||| |||||| | ||||||| ||||||||||||  ||||||||||||||| ||||    
T  23566453 ttgataaaagataatgaa-tgagtacaatagtgttcctatatatagagattagtttgagtaactacctctaactaacttctaaccaagctactaagtcta 23566551  T
Q  218 gtttacctatcaactaaccatagttgatta 247  Q
    |||||| ||||||||||| |||||||||||    
T  23566552 gtttacttatcaactaactatagttgatta 23566581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 499 - 578
Target Start/End: Original strand, 3032581 - 3032661
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  3032581 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttac 3032661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 152 - 247
Target Start/End: Complemental strand, 18656203 - 18656107
Alignment:
Q  152 ttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgatta 247  Q
    ||||||||||||||| |||||| | ||||||||||||||||||||  |||| |||||||||||||||||||| |||||||||||| |||||||||||    
T  18656203 ttcctatatatagagattagtttgagtaactaactctaactaacttctaactaagctactaactctagtttagctatcaactaactatagttgatta 18656107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 499 - 578
Target Start/End: Complemental strand, 54858987 - 54858907
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  54858987 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttac 54858907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 499 - 583
Target Start/End: Complemental strand, 52573655 - 52573570
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttactattg 583  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||| ||||    
T  52573655 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcactaatcctagcaatttaccattg 52573570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 499 - 578
Target Start/End: Complemental strand, 27069337 - 27069257
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||    
T  27069337 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatttac 27069257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 496 - 579
Target Start/End: Original strand, 52573224 - 52573308
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttact 579  Q
    |||||||||||||||||||||||   ||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||    
T  52573224 tttaggcttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtacctgtaatcgctaatcctggcaatttact 52573308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 499 - 578
Target Start/End: Original strand, 54858559 - 54858639
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||    
T  54858559 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttac 54858639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 500 - 578
Target Start/End: Complemental strand, 10408315 - 10408236
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||| |||||||||  |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  10408315 ggcttaatgttgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttac 10408236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 496 - 578
Target Start/End: Original strand, 27068906 - 27068989
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||| |||||||||||  ||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  27068906 tttaggcttaaggatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaatcgctaatcctggcaatttac 27068989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 8005917 - 8005832
Alignment:
Q  123 ataaaagat-attgaaatgatacatgagtgttcctatatatagagtttagttgtgtaactaactctaactaactcttaaccaagct 207  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||  |||||||| |||||||||  ||||||||||||    
T  8005917 ataaaagatgattgaaatgatacatgagtgttcctatatatagagattagttaagtaactaattctaactaatccttaaccaagct 8005832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 502 - 578
Target Start/End: Original strand, 45463075 - 45463152
Alignment:
Q  502 cttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||  |||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  45463075 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttac 45463152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 497 - 577
Target Start/End: Complemental strand, 51859835 - 51859754
Alignment:
Q  497 ttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||||||||||||||||||  ||||||||||| ||| |||| ||||||||||  |||||||||||||||||||||||||    
T  51859835 ttaggcttaatgatgtgtttcgtccttgcaattagacgtaatttaaaaattagtctttgtaatcgctaatcctggcaattta 51859754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 54296527 - 54296454
Alignment:
Q  148 agtgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactctagtt 220  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||||||  |||||||||||||||||||||||    
T  54296527 agtgttcctatatatagagattagtttgagtaactaactctaactaacttctaaccaagctactaactctagtt 54296454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 499 - 574
Target Start/End: Complemental strand, 22987278 - 22987202
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaat 574  Q
    ||||||||||||||||||||  ||| ||||||| |||||||||||| ||||||||||||||||||||||||| ||||    
T  22987278 aggcttaatgatgtgtttcgtccttacaattagacgtcatttaaaaattagtccatgtaatcgctaatcctgacaat 22987202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 500 - 578
Target Start/End: Original strand, 10407889 - 10407968
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||  |||||||||||| ||||||| ||||||| ||| ||||||||||||||||| ||||||||    
T  10407889 ggcttaatgatgtgtttcgtccttgcaattaggagtcatttaaaaattactccctgtaatcgctaatcctgacaatttac 10407968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 498 - 578
Target Start/End: Complemental strand, 39701337 - 39701256
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||| ||||||||||||||||  |||||||||||||||||||| |||||||||| ||||||||| ||||| || ||||||||    
T  39701337 taggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctatgtaatcgttaatcttgacaatttac 39701256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 498 - 578
Target Start/End: Complemental strand, 50504253 - 50504172
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||||  |||| ||||||||||||||| ||||||||||  |||||||| |||||| ||||||||||    
T  50504253 taggcttaatgatgtgtttcgtccttgtaattaggcgtcatttaaaaattagtctctgtaatcgttaatccaggcaatttac 50504172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 131
Target Start/End: Original strand, 5653176 - 5653288
Alignment:
Q  20 ggaatcccaaggataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatcaa-taga 118  Q
    ||||| |||||||||||||| ||||  |||||||||| ||||||| |||  |||||| ||||||||||| ||| || ||||||||| ||| | || ||||    
T  5653176 ggaatgccaaggataaagatcatagtgatcagctagaaagagagcataggtgtattcatgtgggagatacccacagtgactcataggagagtaaactaga 5653275  T
Q  119 tttgataaaagat 131  Q
    |||||||||||||    
T  5653276 tttgataaaagat 5653288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 503 - 574
Target Start/End: Original strand, 11523952 - 11524024
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaat 574  Q
    ||||||||||||||||  |||||||||||||||||||| ||||||||||  |||||||| |||||||||||||    
T  11523952 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgttaatcctggcaat 11524024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 503 - 574
Target Start/End: Original strand, 22717942 - 22718014
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaat 574  Q
    ||||||||||||||||  ||| ||||||| |||||||||||| ||||||||||||||||||||||||| ||||    
T  22717942 ttaatgatgtgtttcgtccttacaattagacgtcatttaaaaattagtccatgtaatcgctaatcctgacaat 22718014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 503 - 574
Target Start/End: Complemental strand, 45463496 - 45463424
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaat 574  Q
    |||||||| |||||||  |||||||||||||||||||| ||||||||||| |||||| |||||||||||||||    
T  45463496 ttaatgatatgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaat 45463424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 198 - 261
Target Start/End: Original strand, 18395817 - 18395880
Alignment:
Q  198 taaccaagctactaactctagtttacctatcaactaaccatagttgattattcatactctaata 261  Q
    ||||||| ||| ||||| |||||||||||||||||||| ||||||||||||||||||| |||||    
T  18395817 taaccaacctattaactatagtttacctatcaactaactatagttgattattcatactataata 18395880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 498 - 578
Target Start/End: Original strand, 16605600 - 16605681
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||||  |||||||||||| ||||||| ||||||||||| ||||||||  || |||| ||||||||    
T  16605600 taggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgtcaaacctgccaatttac 16605681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 498 - 578
Target Start/End: Original strand, 27891582 - 27891663
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||||  ||||||||||| | | |||| ||||||||||| |||||||||||||  |||||||||||    
T  27891582 taggcttaatgatgtgtttcgtccttgcaattagacattatttaaaaattagtccctgtaatcgctaattttggcaatttac 27891663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 498 - 574
Target Start/End: Original strand, 39700907 - 39700984
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaat 574  Q
    |||| |||||| ||||||||  |||||||||||||||| |||| ||||||| ||||||||||||||||||||| ||||    
T  39700907 taggattaatggtgtgtttcattcttgcaattaggcgttatttaaaaattaatccatgtaatcgctaatcctgacaat 39700984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 503 - 578
Target Start/End: Complemental strand, 5818198 - 5818122
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||   ||| ||||||||||||||||||| ||||||| |||||||| |||||||| ||||||||    
T  5818198 ttaatgatgtgtttcgtctttgtaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctgtcaatttac 5818122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 42665152 - 42665048
Alignment:
Q  28 aaggataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatcaatagatttgataaa 127  Q
    |||||||||| | ||||  ||| |||||| ||||||| ||  ||||||  | ||||||||| ||||||| |||||||| ||||| |||||||||||||||    
T  42665152 aaggataaaggtcatagtgatcggctagaaagagagcataagagtatttatctgggagatacccatagaaactcatagtagaatgaatagatttgataaa 42665053  T
Q  128 agata 132  Q
    |||||    
T  42665052 agata 42665048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 499 - 578
Target Start/End: Original strand, 50503824 - 50503904
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||||  || |||||||||| |||||| ||||| |||||||||||||| ||||| | |||||||||    
T  50503824 aggcttaatgatgtgtttcgtcctcgcaattaggcatcatttaaaaatcagtccatgtaatcgttaatcttagcaatttac 50503904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 498 - 577
Target Start/End: Original strand, 51203607 - 51203687
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||||| |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  51203607 taggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 51203687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 3274601 - 3274672
Alignment:
Q  176 gtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgatta 247  Q
    |||| |||||||||||||||  ||| ||||| ||||||||| |||||||||||||||||  |||||||||||    
T  3274601 gtaattaactctaactaacttctaatcaagccactaactcttgtttacctatcaactaattatagttgatta 3274672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 6732665 - 6732747
Alignment:
Q  120 ttgataaaagatatt-gaaatgatacatgagtgttcctatatatagagtttagttgtgtaactaactctaactaactcttaaccaa 204  Q
    ||||||||||||| | |||| ||||||||||||||||||||||||||| ||| |||    |||||||| |||||||||||||||||    
T  6732665 ttgataaaagatagtagaaaagatacatgagtgttcctatatatagagattaattg---gactaactccaactaactcttaaccaa 6732747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 210 - 261
Target Start/End: Complemental strand, 18320114 - 18320063
Alignment:
Q  210 taactctagtttacctatcaactaaccatagttgattattcatactctaata 261  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||| |||||    
T  18320114 taactctagtttacctatcaattaactatagttgattattcatactgtaata 18320063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 210 - 261
Target Start/End: Original strand, 18398569 - 18398620
Alignment:
Q  210 taactctagtttacctatcaactaaccatagttgattattcatactctaata 261  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||| |||||    
T  18398569 taactctagtttacctatcaattaactatagttgattattcatactgtaata 18398620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 495 - 577
Target Start/End: Complemental strand, 32950544 - 32950461
Alignment:
Q  495 atttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||||||| |||||||||| || |||||||||||| | ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  32950544 atttaggcttattgatgtgtttagcccttgcaattaggtggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 32950461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 499 - 577
Target Start/End: Original strand, 34837073 - 34837152
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||| |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  34837073 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 34837152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 495 - 577
Target Start/End: Complemental strand, 34837476 - 34837393
Alignment:
Q  495 atttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||||||| |||||||||| || |||||||||||||| ||||| |||||| |||  |||||| ||||||||||||| ||||    
T  34837476 atttaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtctctgtaattgctaatcctggcatttta 34837393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 499 - 577
Target Start/End: Complemental strand, 42738429 - 42738350
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||| |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  42738429 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 42738350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 500 - 577
Target Start/End: Original strand, 9400519 - 9400597
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||||||||||| || |  |||||||||||| ||||||| |||||| |||| |||||| ||||||||||||||||||    
T  9400519 ggcttaatgatgtgattagtccttgcaattaggtgtcatttaaaaattcgtccctgtaattgctaatcctggcaattta 9400597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 500 - 577
Target Start/End: Complemental strand, 38012567 - 38012489
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||| |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  38012567 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 38012489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 496 - 569
Target Start/End: Complemental strand, 50751929 - 50751856
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctg 569  Q
    |||||||||||||||||||||| | | |||||||||||||| ||| |||||| |||| |||||||||||||||||    
T  50751929 tttaggcttaatgatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtcc-tgtaatcgctaatcctg 50751856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 499 - 575
Target Start/End: Complemental strand, 22567184 - 22567107
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatt 575  Q
    ||||||||||||||| || |  |||||||||||||||||||| |||||| |||| |||||| ||||||||| ||||||    
T  22567184 aggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatt 22567107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 497 - 577
Target Start/End: Original strand, 42738028 - 42738109
Alignment:
Q  497 ttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||||| |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| | ||||||||||| ||||    
T  42738028 ttaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcatttta 42738109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 507 - 577
Target Start/End: Original strand, 9144773 - 9144844
Alignment:
Q  507 tgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  9144773 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 9144844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 499 - 577
Target Start/End: Complemental strand, 9145164 - 9145085
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||| |||||||||| || |||||||||||||| ||||| |||||  |||| |||||| ||||||||||||| ||||    
T  9145164 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaatgcgtccctgtaattgctaatcctggcatttta 9145085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 499 - 577
Target Start/End: Original strand, 27934531 - 27934610
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||||||||||| || |  |||||||||||| ||| ||||||| || |||| |||||| ||||||||||||||||||    
T  27934531 aggcttaatgatgtgattagtccttgcaattaggggtcgtttaaaaatttgtccctgtaattgctaatcctggcaattta 27934610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 499 - 577
Target Start/End: Original strand, 32950141 - 32950220
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||| |||||||||| || |||||||||||||| ||||| |||||| ||||  ||||| ||||||||||||| ||||    
T  32950141 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtcccagtaattgctaatcctggcatttta 32950220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 502 - 572
Target Start/End: Original strand, 39666772 - 39666843
Alignment:
Q  502 cttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggca 572  Q
    |||||||||||||||||   ||| ||||||  ||||||||||| |||||| |||||||||||||||||||||    
T  39666772 cttaatgatgtgtttcgtctttgtaattagaagtcatttaaaaattagtcaatgtaatcgctaatcctggca 39666843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 503 - 573
Target Start/End: Original strand, 50750890 - 50750961
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaa 573  Q
    |||| |||||||||| | | |||||||||||||| ||||||| || |||| |||||||||||||||||||||    
T  50750890 ttaaggatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcctggcaa 50750961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 500 - 577
Target Start/End: Original strand, 4982726 - 4982804
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||||||||||| || |  ||||||||||| ||| |||||||| || ||||||||||| ||||||| ||||||||||    
T  4982726 ggcttaatgatgtgattagtccttgcaattagacgtaatttaaaaattcgtccatgtaattgctaatcttggcaattta 4982804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 583
Target Start/End: Complemental strand, 15508079 - 15508017
Alignment:
Q  521 cttgcaattaggcgtcatttaaaattagtccatgtaatcgctaatcctggcaatttactattg 583  Q
    |||||||||||| ||| ||||||| | |||| ||||||||||||||||| |||||||| ||||    
T  15508079 cttgcaattaggggtcgtttaaaaattgtccttgtaatcgctaatcctgacaatttaccattg 15508017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 23613330 - 23613388
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || ||||||||||||||||||| |||||||||||    
T  23613330 cttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttac 23613388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 24711132 - 24711190
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || |||| ||||||||||||||||||||||||||    
T  24711132 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttac 24711190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 578
Target Start/End: Complemental strand, 34765787 - 34765729
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || || ||||||||||||||||||||||||||||    
T  34765787 cttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttac 34765729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 37248257 - 37248315
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || |||| ||||||||||||||||||||||||||    
T  37248257 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttac 37248315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 500 - 577
Target Start/End: Original strand, 38012170 - 38012248
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||| |||||||||  || |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  38012170 ggcttattgatgtgttcagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 38012248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 521 - 577
Target Start/End: Original strand, 33247295 - 33247352
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||||||||| ||||||||||| || |||| |||||| ||||||||||||||||||    
T  33247295 cttgcaattaggtgtcatttaaaaattcgtccctgtaattgctaatcctggcaattta 33247352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 502 - 577
Target Start/End: Complemental strand, 9400914 - 9400838
Alignment:
Q  502 cttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||||||||| || |  |||||||||||| ||| ||||||| || |||| |||||| ||||||||||||||||||    
T  9400914 cttaatgatgtgattagtccttgcaattaggggtcgtttaaaaattcgtccctgtaattgctaatcctggcaattta 9400838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 18395649 - 18395764
Alignment:
Q  22 aatcccaaggataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatcaatagattt 121  Q
    ||||||| |||||||| | ||||  || ||| ||| ||||||| ||  ||||||| |||||||||||  |||| |||||||||| | | | ||||||| |    
T  18395649 aatcccacggataaaggtcatagtgattagcaagaaagagagcataagagtattcatgtgggagatactcatatagactcatagtatagtgaatagatat 18395748  T
Q  122 gataaaagatattgaa 137  Q
    ||||||||||| ||||    
T  18395749 gataaaagatagtgaa 18395764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 521 - 575
Target Start/End: Complemental strand, 27934894 - 27934839
Alignment:
Q  521 cttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatt 575  Q
    |||||||||||||||||||| |||||| |||| |||||| ||||||||| ||||||    
T  27934894 cttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatt 27934839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 500 - 577
Target Start/End: Complemental strand, 4983123 - 4983045
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||||||||||| || |  |||||||||||||||| ||| ||||||  ||| |||||| ||||||||| ||||||||    
T  4983123 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcatccttgtaattgctaatcctcgcaattta 4983045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 5368968 - 5369026
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||  || ||||||| || |||| ||||||||||||||||||||||||||    
T  5368968 cttgcaattagggatcgtttaaaaattggtccttgtaatcgctaatcctggcaatttac 5369026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 7451855 - 7451913
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || |||| |||||||| |||||||||||||||||    
T  7451855 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttac 7451913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 521 - 578
Target Start/End: Complemental strand, 44967445 - 44967387
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||  ||| ||||||| || |||| ||||||||||||||||||||||||||    
T  44967445 cttgcaattagaggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttac 44967387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 507 - 578
Target Start/End: Complemental strand, 6237241 - 6237169
Alignment:
Q  507 tgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||| ||| | |||| |||||||||||||||||||| ||||||  |||||| ||||||||||  |||||||    
T  6237241 tgatgtctttagttcttacaattaggcgtcatttaaaatttagtctctgtaattgctaatcctgagaatttac 6237169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 503 - 570
Target Start/End: Complemental strand, 39667199 - 39667131
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctgg 570  Q
    ||||||||||||||||  |||| ||||| | ||||||| |||||| |||| |||||||| |||||||||    
T  39667199 ttaatgatgtgtttcgtccttgtaattacgggtcatttaaaaattggtccctgtaatcgttaatcctgg 39667131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 262 - 499
Target Start/End: Original strand, 37857848 - 37858086
Alignment:
Q  262 ccactcaacaatcaaaatcggacattaacttaatgtatctttggtattaagtatcgcaatggaattgtacaaaatcaca-tggttcaccgtaattttagc 360  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37857848 ccactcaacaatcaaaatcggacattaacttaatgtatgtttggtattaagtatcgcaatggaattgtacaaaatcacagtggttcaccgtaattttagc 37857947  T
Q  361 acatctatctagagtaataccaaaaatgtggtggtgcattttgattttcacaattctagtgtcaattcaaacatgtactaagataatgacaaaaaatata 460  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37857948 acatctatctagagtaataccaaaaatgtgatggtgcattttgattttcacaattctagtgtcaattcaaacatgtactaagataatgacaaaaaatata 37858047  T
Q  461 tgttacgggtgggactttcgatcatgttcaattgattta 499  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  37858048 tgttatgggtgagactttcgatcatgttcaattgattta 37858086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 120 - 247
Target Start/End: Complemental strand, 29758247 - 29758119
Alignment:
Q  120 ttgataaaagatattgaaatga-tacatgagtgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactcta 217  Q
    ||||||||||||| |||| ||| ||||  ||||||||||||||||||| |||||| | ||||||| ||||||||||||  ||||||||||||||||||||    
T  29758247 ttgataaaagataatgaa-tgagtacaatagtgttcctatatatagagattagtttgagtaactacctctaactaacttctaaccaagctactaactcta 29758149  T
Q  218 gtttacctatcaactaaccatagttgatta 247  Q
    |||||| ||||||||||| |||||||||||    
T  29758148 gtttacttatcaactaactatagttgatta 29758119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 499 - 578
Target Start/End: Complemental strand, 8710895 - 8710815
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  8710895 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctgacaatttac 8710815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 500 - 578
Target Start/End: Complemental strand, 28226170 - 28226091
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||  |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  28226170 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttac 28226091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 499 - 578
Target Start/End: Original strand, 15604338 - 15604418
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||||  |||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  15604338 aggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttac 15604418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 25302823 - 25302758
Alignment:
Q  123 ataaaagat-attgaaatgatacatgagtgttcctatatatagagtttagttgtgtaactaactct 187  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25302823 ataaaagatgattgaaatgatacatgagtgatcctatatatagagtttagttgtgtaactaactct 25302758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 498 - 578
Target Start/End: Original strand, 6573045 - 6573126
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||| ||||||||||||||||  | |||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  6573045 taggtttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaatttgtccatgtaatcgctaatcttggcaatttac 6573126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 498 - 578
Target Start/End: Original strand, 6573541 - 6573622
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||||   | | |||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  6573541 taggcttaatgatgtgtttcatccctccaattaggcgtcatttaaaaattcgtccatgtaatcgctaatcctggcaatttac 6573622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 25306818 - 25306753
Alignment:
Q  123 ataaaagat-attgaaatgatacatgagtgttcctatatatagagtttagttgtgtaactaactct 187  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  25306818 ataaaagatgattgaaatgttacatgagtgttcctatatatagagtttagctgtgtaactaactct 25306753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 501 - 578
Target Start/End: Complemental strand, 41588483 - 41588405
Alignment:
Q  501 gcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||| ||||||||||  ||| |||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||    
T  41588483 gcttaataatgtgtttcgtccttacaattaggcgtcatttaaaaattagtccctgtaatcgctaattctggcaatttac 41588405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 41602452 - 41602398
Alignment:
Q  133 ttgaaatgatacatgagtgttcctatatatagagtttagttgtgtaactaactct 187  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  41602452 ttgaaatgatacatgagtgttcctatatatagaatttagttatgtaactaactct 41602398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 577
Target Start/End: Original strand, 8342185 - 8342265
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||| ||||||||||||||||  |||||||||| ||||||||| |||||||||| ||||||| | ||||||||||||||||    
T  8342185 taggtttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtctatgtaattggtaatcctggcaattta 8342265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 503 - 578
Target Start/End: Complemental strand, 15604762 - 15604686
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaat-tagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||| |  |||||||||||| |||||||||||  |||||| ||||||||||||||||||||||||||    
T  15604762 ttaatgatgtgttttgtccttgcaattaggtgtcatttaaaaactagtccctgtaatcgctaatcctggcaatttac 15604686  T

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Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 501 - 578
Target Start/End: Original strand, 11830365 - 11830443
Alignment:
Q  501 gcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||  ||||||||||| |||||||| ||||||||||| |||||| |||||||||  ||||||||    
T  11830365 gcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaattgctaatcctaacaatttac 11830443  T

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Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 497 - 577
Target Start/End: Original strand, 13995670 - 13995751
Alignment:
Q  497 ttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||||| |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  13995670 ttaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 13995751  T

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Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 498 - 577
Target Start/End: Complemental strand, 13996072 - 13995992
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||||| |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  13996072 taggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 13995992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 499 - 577
Target Start/End: Original strand, 1695739 - 1695818
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||| |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  1695739 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 1695818  T

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Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 499 - 577
Target Start/End: Original strand, 33062049 - 33062128
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||| |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  33062049 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 33062128  T

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Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 499 - 577
Target Start/End: Complemental strand, 33062448 - 33062369
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||| |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  33062448 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 33062369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 499 - 577
Target Start/End: Original strand, 33739702 - 33739781
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||| |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  33739702 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 33739781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 497 - 577
Target Start/End: Complemental strand, 33740103 - 33740022
Alignment:
Q  497 ttaggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||||| |||||||||| || ||| |||||||||| ||||||||| || |||| |||||| ||||||||||||| ||||    
T  33740103 ttaggcttattgatgtgtttagcccttacaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 33740022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 503 - 578
Target Start/End: Complemental strand, 8342602 - 8342526
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||  ||| |||||||||||||||| ||||||||||  |||||||  |||||||| ||||||||    
T  8342602 ttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtctctgtaatcaataatcctgacaatttac 8342526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 500 - 578
Target Start/End: Original strand, 25892394 - 25892473
Alignment:
Q  500 ggcttaatgatgtgtttcgctct-tgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||  ||| || |||||||| |||||||||| || |||||||||||||||||||||||||| ||||    
T  25892394 ggcttaatgatgtgtttca-tctatgaaattaggcttcatttaaaaatttgtccatgtaatcgctaatcctggcaaattac 25892473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 498 - 577
Target Start/End: Complemental strand, 41248958 - 41248878
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||||| ||||||||||  | |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  41248958 taggcttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 41248878  T

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Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 499 - 577
Target Start/End: Complemental strand, 14900879 - 14900800
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||||||||||| || |  |||||||||||| ||| ||||||| || |||| |||||| ||||||||||||||||||    
T  14900879 aggcttaatgatgtgattagtccttgcaattaggggtcgtttaaaaatttgtccctgtaattgctaatcctggcaattta 14900800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 520 - 578
Target Start/End: Original strand, 16099075 - 16099134
Alignment:
Q  520 tcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||| ||||||||||| || |||| ||||||| ||||||||||||||||||    
T  16099075 tcttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttac 16099134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 578
Target Start/End: Complemental strand, 11163430 - 11163372
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || |||| ||||||||||||||||||||||||||    
T  11163430 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttac 11163372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 498 - 575
Target Start/End: Original strand, 14900494 - 14900572
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcatt-taaaattagtccatgtaatcgctaatcctggcaatt 575  Q
    |||||||||||||||| || |  |||||||||||||||||||  |||||| |||| |||||| ||||||||| ||||||    
T  14900494 taggcttaatgatgtgattagtccttgcaattaggcgtcattcaaaaattcgtccctgtaattgctaatccttgcaatt 14900572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 578
Target Start/End: Complemental strand, 44714168 - 44714110
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| ||||||| |||||| |||||||||||||||||||    
T  44714168 cttgcaattaggggtcgtttaaaaattagtccctgtaattgctaatcctggcaatttac 44714110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 509 - 578
Target Start/End: Complemental strand, 39936665 - 39936596
Alignment:
Q  509 atgtgtttcgctcttgcaattaggcgtcatttaaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||  | |||||||||||||  ||||||||| |||| |||||||| |||||||||||| ||||    
T  39936665 atgtgtttcgtccctgcaattaggcgtggtttaaaattggtccttgtaatcgttaatcctggcaaattac 39936596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 498 - 577
Target Start/End: Original strand, 41248557 - 41248637
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||| ||| |||||||||| || |||||||||||||| ||||| ||||||  ||| |||||| ||||||||||||| ||||    
T  41248557 taggtttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcatccctgtaattgctaatcctggcatttta 41248637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 499 - 570
Target Start/End: Original strand, 41587234 - 41587305
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctgg 570  Q
    ||||||||||||||||||||  |||||||||| | ||||||| |||||| |||| |||||||| |||||||||    
T  41587234 aggcttaatgatgtgtttcgtccttgcaattaagagtcatttaaaaattggtcc-tgtaatcgttaatcctgg 41587305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 577
Target Start/End: Complemental strand, 1696130 - 1696059
Alignment:
Q  507 tgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||||||| || |||||||||||||| ||||| |||||| || | |||||| ||||||||||||| ||||    
T  1696130 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgttcctgtaattgctaatcctggcatttta 1696059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 18739730 - 18739664
Alignment:
Q  187 taactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgattattcatac 254  Q
    ||||||||||| |||||  ||||||||||||||| || ||||||||||| ||| ||||||| ||||||    
T  18739730 taactaactct-aaccagactactaactctagttaacgtatcaactaactataattgattaatcatac 18739664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 15848109 - 15848167
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || |||| |||||||||||||||||| |||||||    
T  15848109 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttac 15848167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 583
Target Start/End: Complemental strand, 6577674 - 6577621
Alignment:
Q  531 ggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttactattg 583  Q
    |||||||||||||| || |||| ||||||||| ||||||||||| |||||||||    
T  6577674 ggcgtcatttaaaaatttgtccctgtaatcgccaatcctggcaaattactattg 6577621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 577
Target Start/End: Original strand, 45556133 - 45556190
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||||||||  || ||||||| || |||| |||||||||||||||||||||||||    
T  45556133 cttgcaattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaattta 45556190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 526 - 573
Target Start/End: Complemental strand, 202758 - 202710
Alignment:
Q  526 aattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaa 573  Q
    ||||||| ||||||||||| || ||||||||||||| ||||||||||||    
T  202758 aattaggggtcatttaaaaattcgtccatgtaatcgttaatcctggcaa 202710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 20516116 - 20516156
Alignment:
Q  178 aactaactctaactaactcttaaccaagctactaactctag 218  Q
    ||||||||||||||| || ||||||||||||||||| ||||    
T  20516116 aactaactctaactatcttttaaccaagctactaaccctag 20516156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 579
Target Start/End: Original strand, 28228666 - 28228750
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttact 579  Q
    ||||||||| |  ||||||||||  | |||||||||| ||||||| |||||| |||| |||||||| ||||| |||||| |||||    
T  28228666 tttaggctttaatatgtgtttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcgtggcaaattact 28228750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 31 - 261
Target Start/End: Complemental strand, 14611299 - 14611069
Alignment:
Q  31 gataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatcaatagatttgataaaaga 130  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| | |||||||| |||||||||||||    
T  14611299 gataaagatcatagatatcagctagagagagagcatagtagtattcatgtgggagataaccatagagactcataggataatcaatatatttgataaaaga 14611200  T
Q  131 tattgaaatgatacatgagtgttcctatatatagagtttagttgtgtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaa 230  Q
    || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  14611199 taatgaaatgatacacgagtgttcctatatatagagtttagttgtgtaactaactctaaataactcttaacgaagctactaactctaatttacctatcaa 14611100  T
Q  231 ctaaccatagttgattattcatactctaata 261  Q
    |||||||||||||||||||||||||||||||    
T  14611099 ctaaccatagttgattattcatactctaata 14611069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 19 - 197
Target Start/End: Complemental strand, 14619151 - 14618973
Alignment:
Q  19 aggaatcccaaggataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatcaataga 118  Q
    |||||||||||||||||| || |||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  14619151 aggaatcccaaggataaaaatgatagatatcaactagagagagagcatagtagtattcatgtgggagataaccatagagactcataggagaatcaataga 14619052  T
Q  119 tttgataaaagatattgaaatgatacatgagtgttcctatatatagagtttagttgtgtaactaactctaactaactct 197  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14619051 tttgataaaagataatgaaatgatacatgagtgttcctatatatagagtttagttgtgtaactaactctaactaactct 14618973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 15868621 - 15868377
Alignment:
Q  19 aggaatcccaaggataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatcaa-tag 117  Q
    ||||||||||||||||||||| ||||  |||||||||| ||||||| ||   |||||| ||||||||||| |||||| ||||||||| ||| | || |||    
T  15868621 aggaatcccaaggataaagatcatagtgatcagctagaaagagagcatatgtgtattcatgtgggagatacccatagtgactcataggagagtaaactag 15868522  T
Q  118 atttgataaaagatattgaaatga-tacatgagtgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactc 215  Q
    |||| | |||||||| |||| ||| ||||  ||||||||||||||||||| |||||| | ||||||||||||||||||||  ||||||||||| ||||||    
T  15868521 atttaacaaaagataatgaa-tgagtacaatagtgttcctatatatagagattagtttgagtaactaactctaactaacttctaaccaagctattaactc 15868423  T
Q  216 tagtttacctatcaactaaccatagttgattattcatactctaata 261  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  15868422 tagtttacctatcaactaactatagttgattattcatactctaata 15868377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 33869475 - 33869231
Alignment:
Q  19 aggaatcccaaggataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatcaa-tag 117  Q
    ||||||||||| ||||||||| ||||  |||||||||| ||||||| |||  |||||| ||||||||||| |||||| ||||||||| ||| | || |||    
T  33869475 aggaatcccaaagataaagatcatagtgatcagctagaaagagagcataggtgtattcatgtgggagatatccatagtgactcataggagagtaaactag 33869376  T
Q  118 atttgataaaagatattgaaatgatacatgagtgttcctatatatagagtttagttgt-gtaactaactctaactaactcttaaccaagctactaactct 216  Q
    |||| | |||||||| ||||    ||||  ||||||||||||||||||| ||||||   ||||||||||||||||||||  |||||||||||||||||||    
T  33869375 atttaacaaaagatagtgaatgcgtacaatagtgttcctatatatagagattagtttaagtaactaactctaactaacttctaaccaagctactaactct 33869276  T
Q  217 agtttacctatcaactaaccatagttgattattcatactctaata 261  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  33869275 agtttacctatcaactaactatagttgattattcatactctaata 33869231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 33866328 - 33866084
Alignment:
Q  19 aggaatcccaaggataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatcaa-tag 117  Q
    ||||||||||||||| ||||| ||||  |||||||||| ||||||| |||  |||||| ||||||||||| |||||| ||| ||||| ||| | || |||    
T  33866328 aggaatcccaaggattaagatcatagtgatcagctagaaagagagcataggtgtattcatgtgggagatacccatagtgacccataggagagtaaactag 33866229  T
Q  118 atttgataaaagatattgaaatga-tacatgagtgttcctatatatagagtttagt-tgtgtaactaactctaactaactcttaaccaagctactaactc 215  Q
    |||| | |||||||| |||| ||| ||||  ||||||||||||||||||| ||||| || ||||||||||||||||||||  ||||||||||||||||||    
T  33866228 atttaacaaaagatagtgaa-tgagtacaatagtgttcctatatatagagattagtctgagtaactaactctaactaacttctaaccaagctactaactc 33866130  T
Q  216 tagtttacctatcaactaaccatagttgattattcatactctaata 261  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||    
T  33866129 tagtttacctatcaactaactatagttgattattaatactctaata 33866084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 15866809 - 15866565
Alignment:
Q  19 aggaatcccaaggataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatcaa-tag 117  Q
    ||||||||||||||||||||| ||||  |||||||||| ||||||| ||   |||||| ||||||||||| |||||| ||||||||| ||| | || |||    
T  15866809 aggaatcccaaggataaagatcatagtgatcagctagaaagagagcatatgtgtattcatgtgggagatacccatagtgactcataggagagtaaactag 15866710  T
Q  118 atttgataaaagatattgaaatga-tacatgagtgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactc 215  Q
    |||| | |||||||| |||| ||| ||||  |||||||||| |||||||| |||||| | ||||||||||||||||||||  || |||||||| ||||||    
T  15866709 atttaacaaaagataatgaa-tgagtacaatagtgttcctaaatatagagattagtttgagtaactaactctaactaacttctacccaagctattaactc 15866611  T
Q  216 tagtttacctatcaactaaccatagttgattattcatactctaata 261  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  15866610 tagtttacctatcaactaactatagttgattattcatactctaata 15866565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 32079993 - 32079895
Alignment:
Q  163 agagtttagttgtgtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgattattcatactctaata 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32079993 agagtttagttgtgtaactaactctaactaactcttaaccaagcttctaactctagtttacctatcaactaactatagttgattattcatactctaata 32079895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 20 - 163
Target Start/End: Complemental strand, 32080163 - 32080021
Alignment:
Q  20 ggaatcccaaggataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatcaatagat 119  Q
    ||||||||| |||||||||| ||||  |||||||||||||||  | ||||||||||| |||| |||||||| | |||||||||||| |||||||||||||    
T  32080163 ggaatcccatggataaagatcatagtgatcagctagagagag--catagtagtattcatgtgagagataactacagagactcataggagaatcaatagat 32080066  T
Q  120 ttgataaaagat-attgaaatgatacatgagtgttcctatatata 163  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  32080065 ttgataaaagatgattgaaatgatacacgagtgttcctatatata 32080021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 137 - 261
Target Start/End: Complemental strand, 14620610 - 14620496
Alignment:
Q  137 aatgatacatgagtgttcctatatatagagtttagttgtgtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaacc 236  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||          ||||||||||||||||| ||||||||||||||||||| |    
T  14620610 aatgatacatgagttttcctatatatagagtttagttgtgtaactaactct----------taaccaagctactaactgtagtttacctatcaactaatc 14620521  T
Q  237 atagttgattattcatactctaata 261  Q
    |||||||||||||||||||||||||    
T  14620520 atagttgattattcatactctaata 14620496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 78 - 247
Target Start/End: Complemental strand, 5377047 - 5376876
Alignment:
Q  78 tgtgggagataaccatagagactcatagaagaa-tcaatagatttgataaaagatattgaaatga-tacatgagtgttcctatatata-gagtttagtt- 173  Q
    |||||||||||  |||||| |||||| | |||| | |||||||| |||||||||||||||| ||| ||||  |||||||||||||||| ||| ||||||     
T  5377047 tgtgggagatactcatagaaactcattgtagaaatgaatagatt-gataaaagatattgaa-tgagtacaatagtgttcctatatataagagattagttt 5376950  T
Q  174 gtgtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgatta 247  Q
    | ||||||||||||||||||||  ||||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  5376949 gagtaactaactctaactaacttctaaccaaactactaactctagtttacttatcaactaactatagttgatta 5376876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 78 - 247
Target Start/End: Complemental strand, 5378902 - 5378731
Alignment:
Q  78 tgtgggagataaccatagagactcatagaagaa-tcaatagatttgataaaagatattgaaatga-tacatgagtgttcctatatata-gagtttagtt- 173  Q
    |||||||||||  |||||| |||||| | |||| | |||||||| |||||||||||||||| ||| ||||  |||||||||||||||| ||| ||||||     
T  5378902 tgtgggagatactcatagaaactcattgtagaaatgaatagatt-gataaaagatattgaa-tgagtacaatagtgttcctatatataagagattagttt 5378805  T
Q  174 gtgtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgatta 247  Q
    | ||||||||||||||||||||  ||||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  5378804 gagtaactaactctaactaacttctaaccaaactactaactctagtttacttatcaactaactatagttgatta 5378731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 500 - 578
Target Start/End: Original strand, 6517503 - 6517582
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||  |||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  6517503 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgctaatcctggcaatttac 6517582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 496 - 578
Target Start/End: Original strand, 22502770 - 22502853
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||| ||||||||||||||||  |||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||    
T  22502770 tttaggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttac 22502853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 499 - 577
Target Start/End: Complemental strand, 22503201 - 22503122
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||||| ||||||||||  |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  22503201 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctggcaattta 22503122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 1088785 - 1088883
Alignment:
Q  148 agtgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgat 245  Q
    ||||||||||||||||||| |||||| |  |||||||||||||||||||  |||| ||||||||||||||| ||||| ||||||||||| |||||||||    
T  1088785 agtgttcctatatatagagattagtttgactaactaactctaactaacttctaacaaagctactaactctaatttacttatcaactaactatagttgat 1088883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 498 - 579
Target Start/End: Original strand, 7160802 - 7160884
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttact 579  Q
    |||| ||||||||||||||||  |||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||    
T  7160802 taggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttact 7160884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 501 - 578
Target Start/End: Original strand, 7905244 - 7905322
Alignment:
Q  501 gcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||  |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||    
T  7905244 gcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgttaatcctggcaatttac 7905322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 503 - 578
Target Start/End: Original strand, 21836035 - 21836110
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||    
T  21836035 ttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaattagt-cttgtaatcgctaatcctggcaatttac 21836110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 496 - 578
Target Start/End: Complemental strand, 21836460 - 21836377
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||||||   |||||||||||||||||||| ||||||||| | ||||||||||||||||| ||||||||    
T  21836460 tttaggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagttcttgtaatcgctaatcctgacaatttac 21836377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 151 - 247
Target Start/End: Original strand, 15149180 - 15149277
Alignment:
Q  151 gttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgatta 247  Q
    |||||||||||||||  ||| || | ||||||||||||||||||||  ||||||||||||| || ||||||||| ||||||||||| |||||||||||    
T  15149180 gttcctatatatagaaattaatttgagtaactaactctaactaacttctaaccaagctactgaccctagtttacttatcaactaactatagttgatta 15149277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 503 - 578
Target Start/End: Complemental strand, 31407301 - 31407225
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||| ||||  |||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||    
T  31407301 ttaatgatgtgcttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttac 31407225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 120 - 247
Target Start/End: Original strand, 19645404 - 19645532
Alignment:
Q  120 ttgataaaagatattgaaatga-tacatgagtgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactcta 217  Q
    ||||||||||||| |||| ||| ||||  ||||||| ||||||||||| |||||| | ||||||| |||| ||||| |  ||||||||||||||||| ||    
T  19645404 ttgataaaagataatgaa-tgagtacaatagtgttcttatatatagagattagtttgagtaactacctctgactaatttctaaccaagctactaacttta 19645502  T
Q  218 gtttacctatcaactaaccatagttgatta 247  Q
    |||||| ||||||||||| ||| |||||||    
T  19645503 gtttacttatcaactaactataattgatta 19645532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 500 - 576
Target Start/End: Original strand, 31406878 - 31406955
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattt 576  Q
    |||||||| ||||||||||  |||||||||||||||||||| ||||||||||| |||||||| ||||||||| |||||    
T  31406878 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggtaattt 31406955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 498 - 578
Target Start/End: Original strand, 32593488 - 32593569
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||| |  ||| |||||||||||||||| ||||||||||| | ||||||||||||||| ||||||||    
T  32593488 taggcttaatgatgtgtttagtcctttcaattaggcgtcatttaaaaattagtccctataatcgctaatcctgacaatttac 32593569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 495 - 578
Target Start/End: Original strand, 10781142 - 10781226
Alignment:
Q  495 atttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||||||||  ||| |||||||||||||||| ||||||||||| || ||||| || || |||||||||||    
T  10781142 atttaggcttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtccctgcaatcgttattcgtggcaatttac 10781226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 496 - 578
Target Start/End: Complemental strand, 7161234 - 7161151
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||| | |||||  |||||||||||||||||||| ||||||||||| | ||||| ||||||||| ||||||||    
T  7161234 tttaggcttaatgatatatttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcactaatcctgacaatttac 7161151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 498 - 578
Target Start/End: Original strand, 15913546 - 15913627
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||| |||||||||||||||| | ||||||||||||||||||| ||||||||||  |||||| |||||| |||| |||||||    
T  15913546 taggtttaatgatgtgtttcgttattgcaattaggcgtcatttaaaaattagtctttgtaattgctaattctggtaatttac 15913627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 503 - 578
Target Start/End: Complemental strand, 7905666 - 7905590
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcattta-aaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||  |||||||||||| |||||||| ||||| |||| | ||||||||||| ||||||||||||    
T  7905666 ttaatgatgtgtttcgtccttgcaattaggtgtcatttataaatttgtccctataatcgctaattctggcaatttac 7905590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 499 - 577
Target Start/End: Original strand, 14196614 - 14196693
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||||||||||| || |  |||||||||||||||||||| |||||| |||| |||||| |||||| |||||||||||    
T  14196614 aggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaattctggcaattta 14196693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 500 - 577
Target Start/End: Complemental strand, 363227 - 363149
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||| |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  363227 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 363149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 496 - 577
Target Start/End: Original strand, 25485949 - 25486031
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||| ||||||||||| || |  |||||||||| ||||||||| |||||| |||| |||||| ||||||||||||||||||    
T  25485949 tttaggtttaatgatgtgattagtccttgcaattaagcgtcatttaaaaattcgtccctgtaattgctaatcctggcaattta 25486031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 501 - 577
Target Start/End: Complemental strand, 14197011 - 14196934
Alignment:
Q  501 gcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||||||||| || |  |||||||||||||||| ||||||| || |||| |||||| ||||||||||||||||||    
T  14197011 gcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgctaatcctggcaattta 14196934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 9415167 - 9415095
Alignment:
Q  148 agtgttcctatatatagagtttagttgtg-taactaactctaactaactcttaaccaagctactaactctagt 219  Q
    ||||||| ||||||||||| ||||||    |||||||||||||||||||  ||||||||||||||||||||||    
T  9415167 agtgttcttatatatagagattagtttcactaactaactctaactaacttctaaccaagctactaactctagt 9415095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 499 - 577
Target Start/End: Original strand, 362869 - 362948
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||| |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| | ||||||||||| ||||    
T  362869 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcatttta 362948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 496 - 566
Target Start/End: Complemental strand, 15913978 - 15913907
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatc 566  Q
    |||||||||||||||||||||||  |||||||||| | ||||||| |||||| |||||| |||||| |||||    
T  15913978 tttaggcttaatgatgtgtttcgtccttgcaattaagggtcatttaaaaatttgtccatataatcgttaatc 15913907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 499 - 577
Target Start/End: Complemental strand, 22373086 - 22373007
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||| |||||| ||| || |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  22373086 aggcttattgatgttttttgcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 22373007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 497 - 578
Target Start/End: Original strand, 12065217 - 12065298
Alignment:
Q  497 ttaggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||| ||||||||| |||||    |||||||||||| |||||||||| |||||| |||||||||||||| ||||||||||||    
T  12065217 ttaggtttaatgatgcgtttcatctttgcaattaggcatcatttaaaaattagtc-atgtaatcgctaattctggcaatttac 12065298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 30337470 - 30337528
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || |||| ||||||||||||||||||||||||||    
T  30337470 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttac 30337528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 28884423 - 28884487
Alignment:
Q  183 actctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgatta 247  Q
    |||||||| |||| | ||| ||||| |||||||||||| |||||||||||||| |||| ||||||    
T  28884423 actctaaccaactataaacaaagcttctaactctagttaacctatcaactaactatagctgatta 28884487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 577
Target Start/End: Complemental strand, 28000783 - 28000704
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||| |||| ||||| || |||||||||||||| ||||| |||||| |||  |||||| |||||| |||||||||||    
T  28000783 aggcttattgatctgtttagcccttgcaattaggcggcatttaaaaatttgtctctgtaattgctaattctggcaattta 28000704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 3059278 - 3059336
Alignment:
Q  521 cttgcaattaggcgtcatttaaaat-tagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||| | ||| |||||||| | ||||||||||||||||||||| |||||||||    
T  3059278 cttgcaattaagggtcgtttaaaatattgtccatgtaatcgctaatcctagcaatttac 3059336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 496 - 569
Target Start/End: Original strand, 28000381 - 28000455
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctg 569  Q
    |||||| ||| |||||||||| || |||||||||||||| ||||| |||||| |||| | |||| ||||||||||    
T  28000381 tttaggtttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctttaattgctaatcctg 28000455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 509 - 573
Target Start/End: Complemental strand, 28498444 - 28498379
Alignment:
Q  509 atgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaa 573  Q
    ||||||||||  | ||||||||||  |||||||||| || |||| |||||||||||||||||||||    
T  28498444 atgtgtttcgtccctgcaattagggctcatttaaaaattggtccttgtaatcgctaatcctggcaa 28498379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 573
Target Start/End: Complemental strand, 30337825 - 30337772
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaa 573  Q
    |||||||||||| ||||||||||| || |||| |||||||||||||||| ||||    
T  30337825 cttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatccttgcaa 30337772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 578
Target Start/End: Original strand, 33517576 - 33517613
Alignment:
Q  541 aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  33517576 aaaattggtccctgtaatcgctaatcctggcaatttac 33517613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 4e-64; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 26 - 253
Target Start/End: Complemental strand, 902298 - 902070
Alignment:
Q  26 ccaaggataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatcaa-tagatttgat 124  Q
    |||||||||||||| |||   ||||| |||| ||||||| |||  |||||| ||||||||||| |||||| ||||||||| ||| | || ||||||| |     
T  902298 ccaaggataaagatcataatgatcagttagaaagagagcataggtgtattcatgtgggagatacccatagtgactcataggagagtaaactagatttaac 902199  T
Q  125 aaaagatattgaaatgatacatgagtgttcctatatatagagtttagttgtgtaactaactctaactaactcttaaccaagctactaactctagtttacc 224  Q
    |||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  902198 aaaagataatgaaatgatacatgagtgttcctatatagagagtttaattgtgtaactaactctaactaacttctaaccaagctactaactctagtttacc 902099  T
Q  225 tatcaactaaccatagttgattattcata 253  Q
    ||||||||||| |||| ||||||||||||    
T  902098 tatcaactaactatagatgattattcata 902070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 3284731 - 3284487
Alignment:
Q  19 aggaatcccaaggataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatcaa-tag 117  Q
    ||||||||||||||||||||| ||||  |||||||||| ||||||| |||  |||||| ||||||||||| |||||| ||||||||| ||| | || |||    
T  3284731 aggaatcccaaggataaagatcatagtgatcagctagaaagagagcataggtgtattcatgtgggagatacccatagtgactcataggagagtaaactag 3284632  T
Q  118 atttgataaaagatattgaaatga-tacatgagtgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactc 215  Q
    |||| | |||||||| |||| ||| ||||  ||||||||||||||||||| |||||| | ||||||||||||||||||||  ||||||||||||||||||    
T  3284631 atttaacaaaagatagtgaa-tgagtacaatagtgttcctatatatagagattagtttgagtaactaactctaactaacttctaaccaagctactaactc 3284533  T
Q  216 tagtttacctatcaactaaccatagttgattattcatactctaata 261  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  3284532 tagtttacctatcaactaactatagttgattattcatactctaata 3284487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 3283030 - 3282786
Alignment:
Q  19 aggaatcccaaggataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatcaa-tag 117  Q
    ||||||||||||||||||||| ||||  |||| ||||| ||||||| |||  |||||| ||||||||||| |||||| |||| |||| ||| | || |||    
T  3283030 aggaatcccaaggataaagatcatagtgatcaactagaaagagagcataggtgtattcatgtgggagatacccatagtgacttataggagagtaaactag 3282931  T
Q  118 atttgataaaagatattgaaatga-tacatgagtgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactc 215  Q
    |||| | |||||||| |||| ||| ||||  ||||||||||||||||||| |||||| | ||||||||||||||||||||  ||||||||||||||||||    
T  3282930 atttaacaaaagatagtgaa-tgagtacaatagtgttcctatatatagagattagtttgagtaactaactctaactaacttctaaccaagctactaactc 3282832  T
Q  216 tagtttacctatcaactaaccatagttgattattcatactctaata 261  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  3282831 tagtttacctatcaactaactatagttgattattcatactctaata 3282786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 9312258 - 9312014
Alignment:
Q  19 aggaatcccaaggataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatcaa-tag 117  Q
    ||||||||||||||||||||| ||||  |||||||||| ||||||| ||   |||||| |||||||||||  ||||| ||||||| | ||| | || |||    
T  9312258 aggaatcccaaggataaagatcatagtgatcagctagaaagagagcatatgtgtattcatgtgggagatactcatagtgactcatgggagagtaaactag 9312159  T
Q  118 atttgataaaagatattgaaatga-tacatgagtgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactc 215  Q
    |||| | |||||||| |||| ||| ||||  ||||||||||||||||||| |||||| | ||||||||||||||||||||  ||||||||||||||||||    
T  9312158 atttaacaaaagataatgaa-tgagtacaatagtgttcctatatatagagattagtttgagtaactaactctaactaacttctaaccaagctactaactc 9312060  T
Q  216 tagtttacctatcaactaaccatagttgattattcatactctaata 261  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  9312059 tagtttacctatcaactaactatagttgattattcatactctaata 9312014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 19 - 262
Target Start/End: Complemental strand, 9310641 - 9310396
Alignment:
Q  19 aggaatcccaaggataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatcaat-ag 117  Q
    ||||||| ||||||||||||| ||||  |||||||||| ||||||| ||   |||||| ||||||||||| |||||| ||||||||| ||| | ||| ||    
T  9310641 aggaatctcaaggataaagatcatagtgatcagctagaaagagagcatatgtgtattcatgtgggagatacccatagtgactcataggagagtaaattag 9310542  T
Q  118 atttgataaaagatattgaaatga-tacatgagtgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactc 215  Q
    |||| | |||||||| |||| ||| ||||  ||||||||||||||||||  ||| || | ||||||||||||||||||||  ||||||||||||||||||    
T  9310541 atttaacaaaagataatgaa-tgagtacaatagtgttcctatatatagatattaatttgagtaactaactctaactaacttctaaccaagctactaactc 9310443  T
Q  216 tagtttacctatcaactaaccatagttgattattcatactctaatac 262  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||    
T  9310442 tagtttacttatcaactaactatagttgattattcatactctaatac 9310396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 156 - 261
Target Start/End: Original strand, 37664695 - 37664801
Alignment:
Q  156 tatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgattattcatac 254  Q
    ||||||||||| |||||| |  |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  37664695 tatatatagagattagtttgaataactaactctaactaacttctaaccaagctactaactctagtttacctatcaactaactatagttgattattcatac 37664794  T
Q  255 tctaata 261  Q
    |||||||    
T  37664795 tctaata 37664801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 156 - 261
Target Start/End: Original strand, 37674417 - 37674523
Alignment:
Q  156 tatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgattattcatac 254  Q
    ||||||||||| |||||| |  |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  37674417 tatatatagagattagtttgaataactaactctaactaacttctaaccaagctactaactctagtttacctatcaactaactatagttgattattcatac 37674516  T
Q  255 tctaata 261  Q
    |||||||    
T  37674517 tctaata 37674523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 156 - 261
Target Start/End: Complemental strand, 37702277 - 37702171
Alignment:
Q  156 tatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgattattcatac 254  Q
    ||||||||||| |||||| |  ||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  37702277 tatatatagagattagtttgaataactaactctaactaatttctaaccaagctactaactctagtttacctatcaactaactatagttgattattcatac 37702178  T
Q  255 tctaata 261  Q
    |||||||    
T  37702177 tctaata 37702171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 498 - 578
Target Start/End: Complemental strand, 40714871 - 40714790
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  40714871 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctggcaatttac 40714790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 33773214 - 33773132
Alignment:
Q  123 ataaaagat-attgaaatgatacatgagtgttcctatatatagagtttagttgtgtaactaactctaactaactcttaaccaa 204  Q
    ||||||||| || |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33773214 ataaaagatgatggaaatgatacatgagtgttcttatatatagagtttagtcgtgtaactaactctaactaactcttaaccaa 33773132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 16808711 - 16808811
Alignment:
Q  148 agtgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgatt 246  Q
    ||||||| ||||||||||| |||||| | ||||||||||||||||||||  ||||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  16808711 agtgttcatatatatagagattagtttgagtaactaactctaactaacttctaaccaaactactaactctagtttacttatcaactaactatagttgatt 16808810  T
Q  247 a 247  Q
    |    
T  16808811 a 16808811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 17449410 - 17449310
Alignment:
Q  148 agtgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgatt 246  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||||||  |||| ||||||||||| ||||||||| ||||||||||| ||||||||||    
T  17449410 agtgttcctatatatagagattagtttgagtaactaactctaactaacttctaacgaagctactaaccctagtttacttatcaactaactatagttgatt 17449311  T
Q  247 a 247  Q
    |    
T  17449310 a 17449310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 495 - 578
Target Start/End: Original strand, 40714439 - 40714523
Alignment:
Q  495 atttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||    
T  40714439 atttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttac 40714523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 82 - 261
Target Start/End: Original strand, 5924852 - 5925020
Alignment:
Q  82 ggagataaccatagagactcatagaagaatcaatagatttgataaaagatattgaaatgatacatgagtgttcctatatatagagtttagttgtgtaact 181  Q
    |||||||  |||||| ||||||   ||||| |||||||| ||||||||||  |||||| ||||| |||||||| |||||||||||||||  ||| |||||    
T  5924852 ggagatactcatagaaactcattatagaatgaatagatt-gataaaagatgatgaaataatacacgagtgttcttatatatagagtttaactgtttaact 5924950  T
Q  182 aactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgattattcatactctaata 261  Q
    ||||         ||| |||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  5924951 aact---------tct-aaccaaactactaactctaatttacctatcaactaactatagttgattattcatactctaata 5925020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 500 - 578
Target Start/End: Original strand, 17188954 - 17189033
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||  |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  17188954 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttac 17189033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 500 - 578
Target Start/End: Complemental strand, 17189277 - 17189198
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||  ||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||    
T  17189277 ggcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttac 17189198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 499 - 578
Target Start/End: Original strand, 28324804 - 28324883
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||   |||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||    
T  28324804 aggcttaatgatgtgtttcctccttgcaattaggcgtcgtttaaaattagttcatgtaatcgctaatcctgacaatttac 28324883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 496 - 578
Target Start/End: Original strand, 31050946 - 31051029
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||||||  ||||||||||||||| |||| ||||||||||  ||||||||||||||||||||||||||    
T  31050946 tttaggcttaatgatgtgtttcgtccttgcaattaggcgttatttaaaaattagtctctgtaatcgctaatcctggcaatttac 31051029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 500 - 578
Target Start/End: Original strand, 49955347 - 49955426
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||  ||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  49955347 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaatcgctaatcctggcaatttac 49955426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 496 - 578
Target Start/End: Complemental strand, 49955777 - 49955694
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||||||  |||||||||||||||||||| ||||||||||  |||||||| |||||||||||||||||    
T  49955777 tttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgttaatcctggcaatttac 49955694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 498 - 579
Target Start/End: Complemental strand, 45750270 - 45750188
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttact 579  Q
    |||||||||||||||||||||  |||||||||||||||||||| ||||||||||  |||||||||||||||| ||||||||||    
T  45750270 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgctaatcctagcaatttact 45750188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 498 - 578
Target Start/End: Complemental strand, 12906087 - 12906006
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||||  ||||||||| | | |||||||||| ||||||||||||||||||||||||||||||||||    
T  12906087 taggcttaatgatgtgtttcgtccttgcaatttgacatcatttaaaaattagtccatgtaatcgctaatcctggcaatttac 12906006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 498 - 578
Target Start/End: Original strand, 37929416 - 37929497
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||||  |||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||||||||    
T  37929416 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgttatcgctaatcctgacaatttac 37929497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 499 - 578
Target Start/End: Complemental strand, 20760932 - 20760852
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||||  ||| |||||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  20760932 aggcttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttac 20760852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 499 - 579
Target Start/End: Original strand, 8898516 - 8898597
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttact 579  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||  ||||||||||||| |||| ||||||||    
T  8898516 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcactgtaatcgctaattctggtaatttact 8898597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 503 - 578
Target Start/End: Complemental strand, 35041037 - 35040961
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||  |||| |||||| |||||||||||| ||||||||||||||||||||||||| ||||||||    
T  35041037 ttaatgatgtgtttcgtccttgtaattagccgtcatttaaaaattagtccatgtaatcgctaatcctgacaatttac 35040961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 500 - 578
Target Start/End: Original strand, 30326496 - 30326575
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||  |||||||||||||||||||| ||||||||||  ||||||||||||| |||| |||||||    
T  30326496 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaattctggtaatttac 30326575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 497 - 578
Target Start/End: Complemental strand, 28325232 - 28325151
Alignment:
Q  497 ttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||||||  |||||||||||||||||||| ||||||||| |||||||||| ||||  |||||||||||    
T  28325232 ttaggcttaatgatgtgtttcggccttgcaattaggcgtcatttaaaaattagt-catgtaatcgttaattatggcaatttac 28325151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 499 - 562
Target Start/End: Complemental strand, 25885420 - 25885356
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgct 562  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||| ||||||||||    
T  25885420 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgct 25885356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 499 - 578
Target Start/End: Complemental strand, 31058484 - 31058404
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||||  ||||||||||| | |||||| |||||||||| ||||||||| ||||| |||||||||||    
T  31058484 aggcttaatgatgtgtttcgtccttgcaattagacatcatttaaaaattagtcaatgtaatcgataatcttggcaatttac 31058404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 499 - 578
Target Start/End: Original strand, 45749841 - 45749921
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||   |||||||||||||||||||| ||||||||||  |||||||| |||||||| ||||||||    
T  45749841 aggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagtctttgtaatcgttaatcctgacaatttac 45749921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 499 - 577
Target Start/End: Complemental strand, 28011766 - 28011687
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||||||||||| || |  |||||||||||||||||||| |||||| |||| |||||| ||||||||||||||||||    
T  28011766 aggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaattta 28011687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 499 - 578
Target Start/End: Complemental strand, 8898944 - 8898864
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||||  |||| ||||||||||||||| ||||||||||  ||||||| ||||| ||| ||||||||    
T  8898944 aggcttaatgatgtgtttcgtccttgtaattaggcgtcatttaaaaattagtctctgtaatcactaatactgacaatttac 8898864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 498 - 577
Target Start/End: Original strand, 24905165 - 24905245
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||||||||||||| || |  |||||||||||||||||||| |||||| |||| |||||| ||||||||| ||||||||    
T  24905165 taggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaattta 24905245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 198 - 247
Target Start/End: Complemental strand, 48940724 - 48940675
Alignment:
Q  198 taaccaagctactaactctagtttacctatcaactaaccatagttgatta 247  Q
    ||||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  48940724 taaccaaactactaactctagtttacttatcaactaactatagttgatta 48940675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 497 - 577
Target Start/End: Original strand, 52134065 - 52134146
Alignment:
Q  497 ttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||||| |||||||||| || ||||||||||||||  |||| |||||| |||| |||||| ||||||||||||| ||||    
T  52134065 ttaggcttattgatgtgtttagcccttgcaattaggcggtatttaaaaattcgtccctgtaattgctaatcctggcatttta 52134146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 502 - 577
Target Start/End: Complemental strand, 33442989 - 33442913
Alignment:
Q  502 cttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||| |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  33442989 cttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 33442913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 499 - 565
Target Start/End: Complemental strand, 7371596 - 7371529
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaat 565  Q
    |||||||| |||||||||||  ||||||||||| |||||||| ||||||||||  |||||||||||||    
T  7371596 aggcttaacgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtctctgtaatcgctaat 7371529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 496 - 578
Target Start/End: Complemental strand, 23209759 - 23209676
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||  |||| ||||   |||||||||||| ||| ||||||| || |||| ||||||||||||||||||||||||||    
T  23209759 tttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttac 23209676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 6367583 - 6367641
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || |||| ||||||||||||||||||||||||||    
T  6367583 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttac 6367641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 496 - 546
Target Start/End: Original strand, 25884697 - 25884747
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaatt 546  Q
    |||||||||||||||||||||||   |||||||||| ||||||||||||||    
T  25884697 tttaggcttaatgatgtgtttcgtcattgcaattagacgtcatttaaaatt 25884747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 497 - 578
Target Start/End: Complemental strand, 32558536 - 32558454
Alignment:
Q  497 ttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||| |  ||| ||||||| |||||||| ||||||||| | | |||||||||||||||  |||||||    
T  32558536 ttaggcttaatgatgtgttttgtccttacaattagacgtcatttaaaaattagttcctataatcgctaatcctgataatttac 32558454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 500 - 577
Target Start/End: Original strand, 33442594 - 33442672
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||| |||||||||| || |||||||||||||| ||||| |||||| |||  |||||| ||||||||||||| ||||    
T  33442594 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtctctgtaattgctaatcctggcatttta 33442672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 34464470 - 34464528
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || ||||||||||||||||||| |||||||||||    
T  34464470 cttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttac 34464528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 500 - 577
Target Start/End: Complemental strand, 52134465 - 52134387
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||| |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| | ||||||||||| ||||    
T  52134465 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcatttta 52134387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 541 - 578
Target Start/End: Complemental strand, 13914453 - 13914416
Alignment:
Q  541 aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||| |||||||||||||||||||||||||||||||    
T  13914453 aaaattggtccatgtaatcgctaatcctggcaatttac 13914416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 502 - 578
Target Start/End: Complemental strand, 44523562 - 44523485
Alignment:
Q  502 cttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||  ||||||||||||| |||||||||| ||| |   | |||||||||||| |||||||||||    
T  44523562 cttaatgatgtgtttcgtccttgcaattaggcctcatttaaaaattaatatctataatcgctaatcatggcaatttac 44523485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 495 - 578
Target Start/End: Complemental strand, 34464882 - 34464798
Alignment:
Q  495 atttaggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||  |||| ||||   |||||||||||| ||  ||||||| || ||||||||||||||||||| |||||||||||    
T  34464882 atttaggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggtccatgtaatcgctaatcttggcaatttac 34464798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 569
Target Start/End: Original strand, 4716475 - 4716538
Alignment:
Q  507 tgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctg 569  Q
    |||||||||| || |||||||||||| | ||||| |||||| ||||||||||| ||||||||||    
T  4716475 tgatgtgtttagcccttgcaattaggtggcatttaaaaattcgtccatgtaattgctaatcctg 4716538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 520 - 578
Target Start/End: Original strand, 26024443 - 26024502
Alignment:
Q  520 tcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||| ||| ||||||| || |||  ||||||||||||||||||||||||||    
T  26024443 tcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttac 26024502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 577
Target Start/End: Complemental strand, 31514707 - 31514636
Alignment:
Q  507 tgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||||||| || ||| |||||||||| ||||||||| || |||| |||||| ||||||||||||| ||||    
T  31514707 tgatgtgtttagcccttacaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 31514636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 255
Target Start/End: Complemental strand, 36580600 - 36580553
Alignment:
Q  208 actaactctagtttacctatcaactaaccatagttgattattcatact 255  Q
    ||||||||||||| |||||||||||| | ||||| |||||||||||||    
T  36580600 actaactctagttaacctatcaactatctatagtagattattcatact 36580553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 7820975 - 7821033
Alignment:
Q  521 cttgcaattaggcgtcatttaa-aattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||| ||||||||| ||||||||||||||||  ||||||||    
T  7820975 cttgcaattaggggtcctttaataattagtccctgtaatcgctaatccttacaatttac 7821033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 14878992 - 14879050
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || || |||||||||||||||| |||||||||||    
T  14878992 cttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcttggcaatttac 14879050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 25647905 - 25647963
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || |||| |||||||| |||||||||||||||||    
T  25647905 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttac 25647963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 498 - 579
Target Start/End: Original strand, 35038453 - 35038535
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttact 579  Q
    |||| ||||| ||||||||||  |||||||||| | ||||||| ||||||  |||||||||||| ||||||| |||| |||||    
T  35038453 taggtttaataatgtgtttcgtccttgcaattaagggtcatttaaaaattgatccatgtaatcgttaatcctagcaaattact 35038535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 573
Target Start/End: Original strand, 13914089 - 13914142
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaa 573  Q
    |||||||||||| ||| ||||||| |||||||||||| ||||||||||| ||||    
T  13914089 cttgcaattaggggtcgtttaaaaattagtccatgtattcgctaatccttgcaa 13914142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 578
Target Start/End: Complemental strand, 19018015 - 19017978
Alignment:
Q  541 aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  19018015 aaaattggtccatgtattcgctaatcctggcaatttac 19017978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 573
Target Start/End: Original strand, 35473652 - 35473705
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaa 573  Q
    |||||||||||| ||| ||||||| || |||| |||||||||||||||||||||    
T  35473652 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 35473705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 578
Target Start/End: Original strand, 41098731 - 41098812
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||  |||| ||||  ||||||||||||| ||| ||||||| || |||  ||||||||||||||||| ||||||||    
T  41098731 taggcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctgacaatttac 41098812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 578
Target Start/End: Original strand, 46163072 - 46163109
Alignment:
Q  541 aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||| |||||||||||||||||||||| ||||||||    
T  46163072 aaaattggtccatgtaatcgctaatcctgacaatttac 46163109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 498 - 577
Target Start/End: Original strand, 7371288 - 7371368
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||| |||||||| |||||||  |||||||||||| ||||||| |||||||||   |||||||||| || |||| ||||||    
T  7371288 taggtttaatgatatgtttcgtccttgcaattaggtgtcatttaaaaattagtttctgtaatcgctgattctggtaattta 7371368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 10653656 - 10653604
Alignment:
Q  78 tgtgggagataaccatagagactcatagaagaatcaatagatttgataaaaga 130  Q
    ||||| ||||| ||| |||||||||||| ||||| |||| |||||||||||||    
T  10653656 tgtggaagatatccacagagactcatagtagaatgaatatatttgataaaaga 10653604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 6e-60; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 37405452 - 37405696
Alignment:
Q  19 aggaatcccaaggataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatcaa-tag 117  Q
    ||||||||||||||||||||| ||||  |||||||||| ||||||| |||  |||||| ||||||||||| |||||| ||||||||| ||| | || |||    
T  37405452 aggaatcccaaggataaagatcatagtgatcagctagaaagagagcataggtgtattcatgtgggagatacccatagtgactcataggagagtaaactag 37405551  T
Q  118 atttgataaaagatattgaaatga-tacatgagtgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactc 215  Q
    |||| | |||||||| |||| ||| ||||  ||||||||||||||||||| |||||| | ||||||||||||||||||||  ||||||||||||||||||    
T  37405552 atttaacaaaagatagtgaa-tgagtacaatagtgttcctatatatagagattagtttgagtaactaactctaactaacttctaaccaagctactaactc 37405650  T
Q  216 tagtttacctatcaactaaccatagttgattattcatactctaata 261  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||    
T  37405651 tagtttatctatcaactaactatagttgattattcatactctaata 37405696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 19 - 191
Target Start/End: Complemental strand, 34844282 - 34844107
Alignment:
Q  19 aggaatcccaaggataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatcaa-tag 117  Q
    ||||||||||||||||||||| ||||  |||| ||||| ||||||| |||  |||||| ||||||||||| |||||| ||||||||| ||| | || |||    
T  34844282 aggaatcccaaggataaagatcatagtgatcaactagaaagagagcataggtgtattcatgtgggagatacccatagtgactcatagtagagtaaactag 34844183  T
Q  118 atttgataaaagat--attgaaatgatacatgagtgttcctatatatagagtttagttgtgtaactaactctaact 191  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34844182 atttgataaaagatggattgaaatgatacatgagtgttcctatatatagagtttagttgtgtaactaactctaact 34844107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 28124720 - 28124820
Alignment:
Q  148 agtgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgatt 246  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||||||  ||||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  28124720 agtgttcctatatatagagattagtttgagtaactaactctaactaacttctaaccaaactactaactctagtttacttatcaactaactatagttgatt 28124819  T
Q  247 a 247  Q
    |    
T  28124820 a 28124820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 28126547 - 28126647
Alignment:
Q  148 agtgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgatt 246  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||||||  ||||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  28126547 agtgttcctatatatagagattagtttgagtaactaactctaactaacttctaaccaaactactaactctagtttacttatcaactaactatagttgatt 28126646  T
Q  247 a 247  Q
    |    
T  28126647 a 28126647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 4895683 - 4895583
Alignment:
Q  148 agtgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgatt 246  Q
    ||||||||||||||||||| |||||| | |||| |||||||||||||||  ||||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  4895683 agtgttcctatatatagagattagtttgagtaaataactctaactaacttctaaccaaactactaactctagtttacttatcaactaactatagttgatt 4895584  T
Q  247 a 247  Q
    |    
T  4895583 a 4895583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 495 - 578
Target Start/End: Complemental strand, 43266697 - 43266613
Alignment:
Q  495 atttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||    
T  43266697 atttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaattctgacaatttac 43266613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 44963262 - 44963162
Alignment:
Q  148 agtgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgatt 246  Q
    ||||||||||||||||||| ||| || | ||||||||||||||||||||  |||||||||||||||| ||||||||| ||||||||||| ||||||||||    
T  44963262 agtgttcctatatatagagattaatttgagtaactaactctaactaacttctaaccaagctactaaccctagtttacttatcaactaactatagttgatt 44963163  T
Q  247 a 247  Q
    |    
T  44963162 a 44963162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 496 - 578
Target Start/End: Original strand, 43266262 - 43266345
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||    
T  43266262 tttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctgacaatttac 43266345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 78 - 247
Target Start/End: Original strand, 20046557 - 20046729
Alignment:
Q  78 tgtgggagataaccatagagactcatagaagaa-tcaatagatttgataaaa-gatattgaaatga-tacatgagtgttcctatatata-gagtttagtt 173  Q
    |||||||||||  |||||| |||||| | |||| | |||||||| ||||||| ||||||||| ||| ||||  |||||||||||||||| ||| ||||||    
T  20046557 tgtgggagatactcatagaaactcattgtagaaatgaatagatt-gataaaaagatattgaa-tgagtacaatagtgttcctatatataagagattagtt 20046654  T
Q  174 -gtgtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgatta 247  Q
     | ||||||||||||||||||||  ||||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  20046655 tgagtaactaactctaactaacttctaaccaaactactaactctagtttacttatcaactaactatagttgatta 20046729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 499 - 579
Target Start/End: Complemental strand, 32934775 - 32934694
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttact 579  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||    
T  32934775 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttact 32934694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 498 - 578
Target Start/End: Complemental strand, 42618339 - 42618258
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||| ||||||||||||||||  |||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||    
T  42618339 taggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctggcaatttac 42618258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 503 - 578
Target Start/End: Original strand, 32068099 - 32068175
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||  ||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||    
T  32068099 ttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttac 32068175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 500 - 578
Target Start/End: Original strand, 25453128 - 25453207
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||  |||||||||||||||||||| ||||||||||| | ||||||||||||||| ||||||||    
T  25453128 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcgctaatcctgacaatttac 25453207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 500 - 578
Target Start/End: Original strand, 42617911 - 42617990
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||  |||||||||||||||||||| ||||||||||| | ||||||||||||||| ||||||||    
T  42617911 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctttaatcgctaatcctgacaatttac 42617990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 490 - 578
Target Start/End: Complemental strand, 10600385 - 10600296
Alignment:
Q  490 aattgatttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||| |||| || ||||||||||||||||   ||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||    
T  10600385 aatttattttggtttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttac 10600296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 503 - 583
Target Start/End: Original strand, 46204424 - 46204505
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttactattg 583  Q
    ||||||||||||||||  |||||||||||||||||||| ||||||||||| |||||||||||| |||| |||||||| ||||    
T  46204424 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaaacctgacaatttaccattg 46204505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 499 - 578
Target Start/End: Complemental strand, 23058856 - 23058776
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||||  ||||||||| |||||||||| ||||||| ||| |||||||| |||||||||||||||||    
T  23058856 aggcttaatgatgtgtttcgtccttgcaattcggcgtcatttaaaaattaatccttgtaatcgttaatcctggcaatttac 23058776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 503 - 578
Target Start/End: Original strand, 25628481 - 25628557
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||  |||||||||||||||||||| ||||||||||  |||||||| |||||||||||||||||    
T  25628481 ttaatgatgtgtttcgtgcttgcaattaggcgtcatttaaaaattagtcattgtaatcgataatcctggcaatttac 25628557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 499 - 578
Target Start/End: Complemental strand, 27138368 - 27138288
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||||  ||| |||| ||||||||||||||| ||||||| ||||||||||||||||| ||||||||    
T  27138368 aggcttaatgatgtgtttcgtcctttcaatcaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttac 27138288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 503 - 578
Target Start/End: Original strand, 28890582 - 28890658
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||  ||||||||||| |||||||| ||||||||||| |||||||||||||||| |||||||||    
T  28890582 ttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccttgtaatcgctaatcctagcaatttac 28890658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 20 - 131
Target Start/End: Original strand, 29597976 - 29598088
Alignment:
Q  20 ggaatcccaaggataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatcaa-taga 118  Q
    ||||||||| |||||||| | ||||  |||||| ||| ||||||| ||  ||||||| ||||||||||| |||||||||||||||| ||||| || ||||    
T  29597976 ggaatcccagggataaaggtcatagtgatcagcaagaaagagagcataagagtattcatgtgggagatacccatagagactcatagtagaatgaactaga 29598075  T
Q  119 tttgataaaagat 131  Q
    |||||||||||||    
T  29598076 tttgataaaagat 29598088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 500 - 578
Target Start/End: Complemental strand, 32068522 - 32068443
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||  |||||||||||| ||||||| ||||||| ||| ||||||||||||||||| ||||||||    
T  32068522 ggcttaatgatgtgtttcgtccttgcaattaggagtcatttaaaaattaatccctgtaatcgctaatcctgccaatttac 32068443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 496 - 578
Target Start/End: Complemental strand, 33828404 - 33828321
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||| ||||||  |||||||||||| ||||||| ||||||||||  ||||||||||||||||| ||||||||    
T  33828404 tttaggcttaatgatgagtttcgtccttgcaattaggtgtcatttaaaaattagtctctgtaatcgctaatcctgacaatttac 33828321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 502 - 578
Target Start/End: Complemental strand, 25628902 - 25628825
Alignment:
Q  502 cttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||| |||  |||||||||| ||||||||||||| |||||| |||||||||||||||||| ||||||||    
T  25628902 cttaatgatgtgtctcgtccttgcaattatgcgtcatttaaaaattagtctatgtaatcgctaatcctgacaatttac 25628825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 500 - 575
Target Start/End: Original strand, 10600026 - 10600102
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatt 575  Q
    |||| ||||||||||||||  |||||||||||||||||||| ||||||||||| | |||||| ||||||||||||||    
T  10600026 ggctaaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcgttaatcctggcaatt 10600102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 30511156 - 30511088
Alignment:
Q  136 aaatgatacatgagtgttcctatatatagagtttagttgtgtaactaactctaactaactcttaaccaa 204  Q
    ||||| |||||| |||| |||||||||||||||||||||  |||||||||||||| |||||||||||||    
T  30511156 aaatggtacatgggtgtccctatatatagagtttagttgaataactaactctaacaaactcttaaccaa 30511088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 577
Target Start/End: Complemental strand, 32680994 - 32680914
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||||||||||||| || |  |||||||||||||||| ||||||| || ||||||||||| ||||||||||||||||||    
T  32680994 taggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccatgtaattgctaatcctggcaattta 32680914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 500 - 578
Target Start/End: Original strand, 22081560 - 22081638
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||  |||||||||| ||||||||| ||||||||||| | ||||||||||| ||||||||||||    
T  22081560 ggcttaatgatgtgtttcgtccttgcaattatgcgtcatttaaaaattagtcc-tctaatcgctaatgctggcaatttac 22081638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 500 - 578
Target Start/End: Complemental strand, 22081985 - 22081906
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||| |||||||  |||||||||| ||||||||| |||||||||   ||||||||||||||||||||||||||    
T  22081985 ggcttaatgatttgtttcgtccttgcaattatgcgtcatttaaaaattagtttctgtaatcgctaatcctggcaatttac 22081906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 25471955 - 25472017
Alignment:
Q  199 aaccaagctactaactctagtttacctatcaactaaccatagttgattattcatactctaata 261  Q
    |||||| ||||||||||||||| |||||||||||||| |||||| |||||||||||| |||||    
T  25471955 aaccaacctactaactctagttaacctatcaactaactatagttaattattcatactataata 25472017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 500 - 583
Target Start/End: Original strand, 23058429 - 23058513
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttactattg 583  Q
    |||||||||||||||||||  |||||||||| | ||||||| ||||||||||| ||||||  |||||||||||||| ||| ||||    
T  23058429 ggcttaatgatgtgtttcgtccttgcaattaagagtcatttaaaaattagtccctgtaattactaatcctggcaatataccattg 23058513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 503 - 578
Target Start/End: Original strand, 32934351 - 32934427
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||   |||||||||||| ||||||| ||||||||||  ||||||||||||||||| ||||||||    
T  32934351 ttaatgatgtgtttcatccttgcaattaggtgtcatttaaaaattagtcgctgtaatcgctaatcctgacaatttac 32934427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 498 - 577
Target Start/End: Complemental strand, 34929049 - 34928969
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||||| |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  34929049 taggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 34928969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 498 - 577
Target Start/End: Complemental strand, 39686933 - 39686853
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||||| |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  39686933 taggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 39686853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 499 - 577
Target Start/End: Complemental strand, 30948558 - 30948479
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||| |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  30948558 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 30948479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 499 - 577
Target Start/End: Original strand, 34928649 - 34928728
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||| |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  34928649 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 34928728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 498 - 578
Target Start/End: Complemental strand, 25453556 - 25453475
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||| ||||||||||||||||   ||| ||||| ||||||||||||| ||||||| || ||||||||||||| |||||||||    
T  25453556 taggtttaatgatgtgtttcgtctttgtaattaagcgtcatttaaaaattagtccctgaaatcgctaatcctagcaatttac 25453475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 497 - 577
Target Start/End: Original strand, 32680592 - 32680673
Alignment:
Q  497 ttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||||||||||||| || |  |||||||||||||||||||| |||||| || | |||||| |||||||||| |||||||    
T  32680592 ttaggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgttcctgtaattgctaatcctgacaattta 32680673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 509 - 569
Target Start/End: Complemental strand, 32688637 - 32688576
Alignment:
Q  509 atgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctg 569  Q
    ||||||||||| |||||||||||| ||||||||||| || |||| |||||||||||||||||    
T  32688637 atgtgtttcgcccttgcaattaggggtcatttaaaatttggtccttgtaatcgctaatcctg 32688576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 6253492 - 6253550
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || |||| ||||||||||||||||||||||||||    
T  6253492 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttac 6253550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 10935815 - 10935873
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || |||| ||||||||||||||||||||||||||    
T  10935815 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttac 10935873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 17102041 - 17102099
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || |||| ||||||||||||||||||||||||||    
T  17102041 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttac 17102099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 21631243 - 21631345
Alignment:
Q  30 ggataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatcaa-tagatttgataaaa 128  Q
    |||||||||| |||   |||||||||| ||||||| |||  |||||  ||||||||||| |||||| ||||||||| ||| | || ||||||||||||||    
T  21631243 ggataaagatcatattgatcagctagaaagagagcataggtgtattaatgtgggagatacccatagtgactcatagtagagtaaactagatttgataaaa 21631342  T
Q  129 gat 131  Q
    |||    
T  21631343 gat 21631345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 578
Target Start/End: Complemental strand, 32299112 - 32299054
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || |||| ||||||||||||||||||||||||||    
T  32299112 cttgcaattaggagtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttac 32299054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 42731440 - 42731498
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || |||| ||||||||||||||||||||||||||    
T  42731440 cttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttac 42731498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 522 - 578
Target Start/End: Complemental strand, 23181400 - 23181343
Alignment:
Q  522 ttgcaattaggcgtcatttaaa-attagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||| ||| |||||| ||| ||||||||||||||||||| |||||||||||    
T  23181400 ttgcaattaggggtcgtttaaatattggtccatgtaatcgctaatcttggcaatttac 23181343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 498 - 578
Target Start/End: Original strand, 39274868 - 39274949
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||| |||||||||||||| |  ||||||||| ||||| |||| ||||||||||  |||||||||||||||| | |||||||    
T  39274868 taggtttaatgatgtgttttgtccttgcaatttggcgttatttaaaaattagtctctgtaatcgctaatcctagtaatttac 39274949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 9878133 - 9878233
Alignment:
Q  20 ggaatcccaaggataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatcaatagat 119  Q
    |||||| ||||||||||  ||||||  |  ||| ||| ||||||| || |||||||| ||||||||||| | ||||||||||||||  |||| |||||||    
T  9878133 ggaatctcaaggataaatgttatagtgaatagcaagaaagagagcataatagtattcatgtgggagatatctatagagactcatagttgaatgaatagat 9878232  T
Q  120 t 120  Q
    |    
T  9878233 t 9878233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 21633196 - 21633279
Alignment:
Q  22 aatcccaaggataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatag 105  Q
    ||||||| |||||||||| ||||  |||||||||| ||||||| |||  |||||| |||||||||||  ||||| ||| |||||    
T  21633196 aatcccagggataaagatcatagtgatcagctagaaagagagcatagatgtattcatgtgggagatactcatagtgacccatag 21633279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 577
Target Start/End: Original strand, 30948167 - 30948238
Alignment:
Q  507 tgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||||||  | |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  30948167 tgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 30948238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 577
Target Start/End: Original strand, 39686533 - 39686612
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||| |||||| |||  | |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  39686533 aggcttattgatgtatttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 39686612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 509 - 578
Target Start/End: Complemental strand, 13050200 - 13050130
Alignment:
Q  509 atgtgtttcgctcttgcaattaggcgtca-tttaaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||  ||||||||||||||| | |||||| || |||| |||||||| ||||||||| |||||||    
T  13050200 atgtgtttcgtccttgcaattaggcgtaattttaaatttcgtccctgtaatcgttaatcctggtaatttac 13050130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 521 - 578
Target Start/End: Complemental strand, 22871684 - 22871626
Alignment:
Q  521 cttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||||||| |||||| |||| |||||| ||||||||| |||||||||    
T  22871684 cttgcaattaggggtcatttaaaaattggtccctgtaatagctaatccttgcaatttac 22871626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 27991760 - 27991818
Alignment:
Q  521 cttgcaattaggcgtcattta-aaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| |||| |||||  ||| ||||||||||||||||||||||||||    
T  27991760 cttgcaattaggggtcgtttagaaattgatccctgtaatcgctaatcctggcaatttac 27991818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 521 - 578
Target Start/End: Complemental strand, 28469415 - 28469357
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || |||| |||||||| |||||||||||||||||    
T  28469415 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttac 28469357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 4571139 - 4571066
Alignment:
Q  120 ttgataaaagatattgaaa-tgataca-tgagtgttcctatatatagagtttagttg-tgtaactaactctaac 190  Q
    ||||||||||||| ||||| ||||||| ||||||||| ||||||||||| |||||||  |||| ||||||||||    
T  4571139 ttgataaaagataatgaaaatgatacaatgagtgttcatatatatagagattagttgaagtaattaactctaac 4571066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 131
Target Start/End: Original strand, 21632964 - 21633076
Alignment:
Q  20 ggaatcccaaggataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatca-ataga 118  Q
    ||||||||| |||||||||| | ||  |||||||  | ||||||| |||  |||||| |||||||||||  ||||| ||||||||| ||||| |  || |    
T  21632964 ggaatcccatggataaagatcacagtgatcagctgaaaagagagcataggtgtattcatgtgggagatacacatagtgactcatagtagaataatctata 21633063  T
Q  119 tttgataaaagat 131  Q
    |||||||||||||    
T  21633064 tttgataaaagat 21633076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 575
Target Start/End: Complemental strand, 27397027 - 27396947
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatt 575  Q
    |||||||||||  |||| ||||   |||||||||||| ||| ||||||| || |||| ||||||||||||||||| |||||    
T  27397027 tttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatt 27396947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 114; Significance: 2e-57; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 6455 - 6211
Alignment:
Q  19 aggaatcccaaggataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatcaa-tag 117  Q
    ||||||||||||||||||||| ||||  |||||||||| ||||||| |||  |||||| ||||||||||| |||||| ||||||||| ||| | || | |    
T  6455 aggaatcccaaggataaagatcatagtgatcagctagaaagagagcatagatgtattcatgtgggagatacccatagtgactcataggagagtaaacttg 6356  T
Q  118 atttgataaaagatattgaaatga-tacatgagtgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactc 215  Q
    |||| | |||||||| |||| ||| ||||  ||||||||||||||||||| |||||| | ||||||||||||||||||||  ||||||||||||||||||    
T  6355 atttaacaaaagatagtgaa-tgagtacaatagtgttcctatatatagagattagtttgagtaactaactctaactaacttctaaccaagctactaactc 6257  T
Q  216 tagtttacctatcaactaaccatagttgattattcatactctaata 261  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||    
T  6256 tagtttacctatcaattaactatagttgattattcatactctaata 6211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 114; Significance: 2e-57; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 120 - 261
Target Start/End: Complemental strand, 39271 - 39130
Alignment:
Q  120 ttgataaaagatattgaaatgatacatgagtgttcctatatatagagtttagttgtgtaactaactctaactaactcttaaccaagctactaactctagt 219  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||    
T  39271 ttgataaaagatgatgaaatgatacatgagtgttcctatatatagagtttagttgtgtaactaactttaactaacttctaaccaagctactaactctagt 39172  T
Q  220 ttacctatcaactaaccatagttgattattcatactctaata 261  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  39171 ttacttatcaactaactatagttgattattcatactctaata 39130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 496 - 578
Target Start/End: Complemental strand, 222219 - 222136
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||||||  |||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||    
T  222219 tttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtacatgtaatcgctaatcctgacaatttac 222136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 503 - 578
Target Start/End: Original strand, 221794 - 221869
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||    
T  221794 ttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaattagt-cttgtaatcgctaatcctggcaatttac 221869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 2e-50; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 39787061 - 39787305
Alignment:
Q  19 aggaatcccaaggataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatcaa-tag 117  Q
    ||||||| ||||||||||||| ||||  |||||||||| ||||||| ||   |||||| ||||||||||| |||||| |||| |||| ||| | || |||    
T  39787061 aggaatctcaaggataaagatcatagtgatcagctagaaagagagcatatgtgtattcatgtgggagatacccatagtgacttataggagagtaaactag 39787160  T
Q  118 atttgataaaagatattgaaatga-tacatgagtgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactc 215  Q
    |||| | |||||| | |||| ||| || |  ||||||||||||||||||| |||||| | ||||||||||||||||||||  ||||||||||||||||||    
T  39787161 atttaacaaaagacagtgaa-tgagtaaaatagtgttcctatatatagagattagtttgagtaactaactctaactaacttctaaccaagctactaactc 39787259  T
Q  216 tagtttacctatcaactaaccatagttgattattcatactctaata 261  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  39787260 tagtttacctatcaactaactatagttgattattcatactctaata 39787305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 498 - 578
Target Start/End: Complemental strand, 17544476 - 17544395
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||||  |||||||||||||||||||| ||||||||| | |||||||| |||||||||||||||||    
T  17544476 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgttaatcctggcaatttac 17544395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 500 - 578
Target Start/End: Original strand, 8875449 - 8875528
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||  |||||||||| ||||||||| ||||||||||| |||||||| |||||||||||||||||    
T  8875449 ggcttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttac 8875528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 506 - 574
Target Start/End: Complemental strand, 8875687 - 8875618
Alignment:
Q  506 atgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaat 574  Q
    |||||||||||||  |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||    
T  8875687 atgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaat 8875618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 498 - 566
Target Start/End: Complemental strand, 20153343 - 20153274
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatc 566  Q
    |||||||||||||||||||||  |||||||||||| ||||||| ||||||||||| ||||||||||||||    
T  20153343 taggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccttgtaatcgctaatc 20153274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 499 - 578
Target Start/End: Complemental strand, 33871765 - 33871685
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||||  |||||||||||||| ||||| ||||||||||  |||||||  |||||||||||||||||    
T  33871765 aggcttaatgatgtgtttcgtccttgcaattaggcgccatttaaaaattagtctctgtaatcagtaatcctggcaatttac 33871685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 500 - 578
Target Start/End: Original strand, 20152781 - 20152860
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||  | |||||||| ||||||||| ||||||||||  |||||||||||||||||| |||||||    
T  20152781 ggcttaatgatgtgtttcgtccatgcaattaagcgtcatttaaaaattagtctctgtaatcgctaatcctggaaatttac 20152860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 500 - 578
Target Start/End: Original strand, 33871339 - 33871418
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||| |  |||||||||| | ||||||||||| ||||||| ||||||||||||| ||||||||||||    
T  33871339 ggcttaatgatgtgttttgtccttgcaattaagtgtcatttaaaaattagtccctgtaatcgctaattctggcaatttac 33871418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 150 - 255
Target Start/End: Original strand, 25076250 - 25076356
Alignment:
Q  150 tgttcctatatatagagtttagttgtg-taactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgattat 248  Q
    ||||||||||| ||||| |||||||   | ||| ||||||||||||||| |||   ||| |||| ||||||| |||||||||||||| ||||||||||||    
T  25076250 tgttcctatatctagagattagttggaatgacttactctaactaactctaaacttggcttctaattctagttaacctatcaactaactatagttgattat 25076349  T
Q  249 tcatact 255  Q
    |||||||    
T  25076350 tcatact 25076356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 150 - 255
Target Start/End: Original strand, 25134219 - 25134325
Alignment:
Q  150 tgttcctatatatagagtttagttgtg-taactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgattat 248  Q
    ||||||||||| ||||| |||||||   | ||| ||||||||||||||| |||   ||| |||| ||||||| |||||||||||||| ||||||||||||    
T  25134219 tgttcctatatctagagattagttggaatgacttactctaactaactctaaacttggcttctaattctagttaacctatcaactaactatagttgattat 25134318  T
Q  249 tcatact 255  Q
    |||||||    
T  25134319 tcatact 25134325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 497 - 577
Target Start/End: Original strand, 1505964 - 1506045
Alignment:
Q  497 ttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||||| |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  1505964 ttaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 1506045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 522 - 578
Target Start/End: Original strand, 22298564 - 22298621
Alignment:
Q  522 ttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||    
T  22298564 ttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcggggcaatttac 22298621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 499 - 565
Target Start/End: Complemental strand, 3656845 - 3656778
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaat 565  Q
    ||||||||||||||||||||  ||||||||||| |||||||| ||||||||||  |||||||||||||    
T  3656845 aggcttaatgatgtgtttcgaccttgcaattagacgtcatttaaaaattagtctttgtaatcgctaat 3656778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 499 - 577
Target Start/End: Complemental strand, 31482800 - 31482721
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||| |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  31482800 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaatttgtccctgtaattgctaatcctggcatttta 31482721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 497 - 570
Target Start/End: Original strand, 297011 - 297085
Alignment:
Q  497 ttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctgg 570  Q
    ||||||||| |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| |||||||||||    
T  297011 ttaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgg 297085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 500 - 577
Target Start/End: Original strand, 31482402 - 31482480
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||| |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  31482402 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 31482480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 521 - 577
Target Start/End: Original strand, 6757886 - 6757943
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||||||||||||||||||||| || |||| |||||| ||||||||||||||||||    
T  6757886 cttgcaattaggcgtcatttaaaaatttgtccctgtaattgctaatcctggcaattta 6757943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 507 - 577
Target Start/End: Complemental strand, 1506357 - 1506286
Alignment:
Q  507 tgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  1506357 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 1506286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 500 - 574
Target Start/End: Complemental strand, 21288083 - 21288008
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaat 574  Q
    ||||||||||||||||| |  |||| |||||| |||| ||||||| ||| |||||||||||||||||| |||||||    
T  21288083 ggcttaatgatgtgttttgtccttgtaattagacgtcgtttaaaaattaatccatgtaatcgctaatcatggcaat 21288008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 11761770 - 11761828
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || |||| ||||||||||||||||||||||||||    
T  11761770 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttac 11761828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 27587169 - 27587227
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || |||| ||||||||||||||||||||||||||    
T  27587169 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttac 27587227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 521 - 578
Target Start/End: Complemental strand, 29646768 - 29646711
Alignment:
Q  521 cttgcaattaggcgtcatttaaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||| ||||||| ||| ||||||||| || ||||||||||||||||||| ||||||||    
T  29646768 cttgtaattaggagtcgtttaaaattggtgcatgtaatcgctaatcctgacaatttac 29646711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 577
Target Start/End: Complemental strand, 297404 - 297333
Alignment:
Q  507 tgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||||||| || |||| ||||||||| ||||||||| || |||| |||||| ||||||||||||| ||||    
T  297404 tgatgtgtttagcccttgtaattaggcgacatttaaaaattcgtccctgtaattgctaatcctggcatttta 297333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 577
Target Start/End: Complemental strand, 6758263 - 6758184
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||||||||||| || |  |||||||||||||||| ||| |||||| |||| |||||| | |||| |||||||||||    
T  6758263 aggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaattctggcaattta 6758184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 33690044 - 33689981
Alignment:
Q  70 agtattcgtgtgggagataaccatagagactcatagaagaatcaa-tagatttgataaaagata 132  Q
    ||||||| ||||||||||| |||||||||||||||  ||| | || ||||||||||||||||||    
T  33690044 agtattcatgtgggagatacccatagagactcataatagagtgaattagatttgataaaagata 33689981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 577
Target Start/End: Original strand, 41930515 - 41930594
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||||||||||| || |  |||||||||||  ||| ||||||| || |||| |||||| ||||||||||||||||||    
T  41930515 aggcttaatgatgtgattagtccttgcaattagaggtcgtttaaaaatttgtccctgtaattgctaatcctggcaattta 41930594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 503 - 577
Target Start/End: Complemental strand, 41930910 - 41930835
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||||||| || |  |||| ||||||||||||||| |||||| |||| |||||| ||||||||| ||||||||    
T  41930910 ttaatgatgtgattagtccttgtaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaattta 41930835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 521 - 578
Target Start/End: Complemental strand, 3529249 - 3529191
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || |||| |||||||| |||||||||||||||||    
T  3529249 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttac 3529191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 5993910 - 5993968
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || |||| ||||||||||||| ||||||||||||    
T  5993910 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaattctggcaatttac 5993968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 521 - 578
Target Start/End: Complemental strand, 24547532 - 24547474
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || |||| | ||||||||||||||||||||||||    
T  24547532 cttgcaattaggggtcgtttaaaaattggtccttataatcgctaatcctggcaatttac 24547474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 521 - 578
Target Start/End: Complemental strand, 28771245 - 28771187
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||| ||||||| ||| ||||||| || ||||||||||||||||||| |||||||||||    
T  28771245 cttgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttac 28771187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 35512169 - 35512227
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||| | ||| ||||||| || |||| ||||||||||||||||||||||||||    
T  35512169 cttgcaattaagggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttac 35512227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 521 - 578
Target Start/End: Complemental strand, 38475406 - 38475348
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || ||||||||||||| |||||||| ||||||||    
T  38475406 cttgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatcctgacaatttac 38475348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 39453321 - 39453379
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || |||  ||||||||||||||||||||||||||    
T  39453321 cttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttac 39453379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 187
Target Start/End: Complemental strand, 8080999 - 8080966
Alignment:
Q  154 cctatatatagagtttagttgtgtaactaactct 187  Q
    |||||||| |||||||||||||||||||||||||    
T  8080999 cctatatagagagtttagttgtgtaactaactct 8080966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 522 - 578
Target Start/End: Complemental strand, 13362634 - 13362577
Alignment:
Q  522 ttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||| ||| ||||||| || |||| |||||||||||||| |||||||||||    
T  13362634 ttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcatggcaatttac 13362577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 578
Target Start/End: Original strand, 16083019 - 16083056
Alignment:
Q  541 aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  16083019 aaaattagtccctgtaatcgataatcctggcaatttac 16083056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 509 - 573
Target Start/End: Original strand, 24141461 - 24141526
Alignment:
Q  509 atgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaa 573  Q
    ||||||||||  | ||||||||| |||||||||||| || |||| |||||||| ||||||||||||    
T  24141461 atgtgtttcgtccctgcaattagacgtcatttaaaaattggtccctgtaatcgttaatcctggcaa 24141526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 522 - 578
Target Start/End: Original strand, 30005175 - 30005232
Alignment:
Q  522 ttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||| ||||||| ||||||||| ||| |||| |||||||||| ||||||||    
T  30005175 ttgcaattaggtgtcatttaaaaattagttcatataattgctaatcctgacaatttac 30005232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 522 - 578
Target Start/End: Complemental strand, 24205003 - 24204947
Alignment:
Q  522 ttgcaattaggcgtcatttaaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||| ||| ||||||| | |  ||||||||||||||||||| ||||||||    
T  24205003 ttgcaattaggggtcgtttaaaaattgatcatgtaatcgctaatcctgacaatttac 24204947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 509 - 568
Target Start/End: Complemental strand, 40150233 - 40150173
Alignment:
Q  509 atgtgtttcgctcttgcaattaggcgtca-tttaaaattagtccatgtaatcgctaatcct 568  Q
    ||||||||||  |||||||||||| |||| ||||||||| |||| |||||||| |||||||    
T  40150233 atgtgtttcgtccttgcaattaggggtcattttaaaattggtccctgtaatcgttaatcct 40150173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 20 - 262
Target Start/End: Complemental strand, 59012 - 58770
Alignment:
Q  20 ggaatcccaaggataaagattatagatatcagctagagagagagcgtagtagtattcgtgtgggagataaccatagagactcatagaagaatcaatagat 119  Q
    |||||||||||||||||||| ||||  |||||| ||| ||  ||| ||  |||| || |||||||||||  |||||| ||||||   ||||| |||||||    
T  59012 ggaatcccaaggataaagatcatagtgatcagcaagaaagcaagcataagagtactcatgtgggagatactcatagaaactcattatagaatgaatagat 58913  T
Q  120 ttgataaaagatattgaaatga-tacatgagtgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactcta 217  Q
    | ||||||||||  |||| ||| ||||  ||||||||||||||||||| |||||| | ||||||||||||||||||||  ||||||||||||||||||||    
T  58912 t-gataaaagatgatgaa-tgagtacaatagtgttcctatatatagagattagtttgagtaactaactctaactaacttctaaccaagctactaactcta 58815  T
Q  218 gtttacctatcaactaaccatagttgattattcatactctaatac 262  Q
    |||||||||  ||||||| ||||||||||||||||| ||||||||    
T  58814 gtttacctactaactaactatagttgattattcatattctaatac 58770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 3e-37; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 159 - 262
Target Start/End: Complemental strand, 14935664 - 14935561
Alignment:
Q  159 atatagagtttagttgtgtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgattattcatactcta 258  Q
    ||||||||||||||||| ||||||| |||||||||||  |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14935664 atatagagtttagttgtataactaattctaactaacttctaaccaagttactaactctagtttacctatcaactaactatagttgattattcatactcta 14935565  T
Q  259 atac 262  Q
    ||||    
T  14935564 atac 14935561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 120 - 247
Target Start/End: Complemental strand, 30224357 - 30224229
Alignment:
Q  120 ttgataaaagatattgaaatga-tacatgagtgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactcta 217  Q
    ||||||||||||| |||| ||| ||||  ||||||||||||||||||| |||||| | ||||||| ||||||||||||  ||||||||||||||||||||    
T  30224357 ttgataaaagataatgaa-tgagtacaatagtgttcctatatatagagattagtttgagtaactacctctaactaacttctaaccaagctactaactcta 30224259  T
Q  218 gtttacctatcaactaaccatagttgatta 247  Q
    |||||| ||||||||||| |||||||||||    
T  30224258 gtttacttatcaactaactatagttgatta 30224229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 151 - 247
Target Start/End: Original strand, 3375558 - 3375655
Alignment:
Q  151 gttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgatta 247  Q
    |||||||||||||||| |||||| | ||||||||||||||||||||  |||||||||||||||| ||||||||| ||||||||||| |||||||||||    
T  3375558 gttcctatatatagagattagtttgagtaactaactctaactaacttctaaccaagctactaaccctagtttacttatcaactaactatagttgatta 3375655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 503 - 578
Target Start/End: Original strand, 25124566 - 25124642
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25124566 ttaatgatgtatttcgttcttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctggcaatttac 25124642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 498 - 578
Target Start/End: Original strand, 7983426 - 7983507
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||| ||||||||||  |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  7983426 taggcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttac 7983507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 152 - 247
Target Start/End: Complemental strand, 5567521 - 5567425
Alignment:
Q  152 ttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgatta 247  Q
    ||||||||||||||| |||||| | ||||||||||| ||||||||  |||| |||||||||||||||||||| |||||||||||| |||||||||||    
T  5567521 ttcctatatatagagattagtttgagtaactaactccaactaacttctaactaagctactaactctagtttagctatcaactaactatagttgatta 5567425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 6428839 - 6428739
Alignment:
Q  148 agtgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgatt 246  Q
    ||||||||||||||||||| |||||| | ||||||| |||||||||||| ||||| ||| ||||||||||||||||| ||||||||||  ||||||||||    
T  6428839 agtgttcctatatatagagattagtttgagtaactacctctaactaacttttaactaaggtactaactctagtttacttatcaactaattatagttgatt 6428740  T
Q  247 a 247  Q
    |    
T  6428739 a 6428739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 500 - 578
Target Start/End: Original strand, 15229931 - 15230010
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||| |  |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  15229931 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttac 15230010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 498 - 578
Target Start/End: Complemental strand, 10445763 - 10445682
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||| ||||||||||||||||  |||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  10445763 taggtttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttac 10445682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 498 - 578
Target Start/End: Complemental strand, 35634527 - 35634446
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||||  |||||||||| ||||||||| ||||||||||| ||||||||||||||||| ||||||||    
T  35634527 taggcttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttac 35634446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 503 - 579
Target Start/End: Complemental strand, 42945537 - 42945460
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttact 579  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||| | ||||||||||||||||| |||||||||    
T  42945537 ttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctgacaatttact 42945460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 500 - 577
Target Start/End: Original strand, 44664508 - 44664586
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||||| ||||||||||  |||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  44664508 ggcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaattta 44664586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 498 - 578
Target Start/End: Complemental strand, 234168 - 234087
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||||  ||||||||||||| |||||| ||||||||||| |||||| | |||||||||||||||||    
T  234168 taggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttac 234087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 498 - 578
Target Start/End: Complemental strand, 710579 - 710498
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||||  ||||||||||||| |||||| ||||||||||| |||||| | |||||||||||||||||    
T  710579 taggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttac 710498  T

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Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 498 - 578
Target Start/End: Complemental strand, 747791 - 747710
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||||  ||||||||||||| |||||| ||||||||||| |||||| | |||||||||||||||||    
T  747791 taggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttac 747710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 498 - 578
Target Start/End: Complemental strand, 871686 - 871605
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||||  ||||||||||||| |||||| ||||||||||| |||||| | |||||||||||||||||    
T  871686 taggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttac 871605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 247
Target Start/End: Original strand, 3379257 - 3379346
Alignment:
Q  159 atatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgatta 247  Q
    |||||||| |||||| | ||||||||||||||||||||  |||| || ||||||||||||||||| |||||||||||| |||||||||||    
T  3379257 atatagagattagtttgagtaactaactctaactaacttctaactaaactactaactctagtttaactatcaactaactatagttgatta 3379346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 502 - 578
Target Start/End: Complemental strand, 8998113 - 8998036
Alignment:
Q  502 cttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||  |||||||||||||||||||| ||||||||| |||||||||||||||| || ||||||||    
T  8998113 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcatgtaatcgctaatcatgacaatttac 8998036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 502 - 578
Target Start/End: Complemental strand, 44664932 - 44664855
Alignment:
Q  502 cttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||  |||||||||||||||||||| ||||||||||  ||||||||||||||||| ||||||||    
T  44664932 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctgacaatttac 44664855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 503 - 578
Target Start/End: Original strand, 8997859 - 8997935
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||  |||||||||||||||||||| ||||||||||| || |||||||||||||| ||||||||    
T  8997859 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgcaatcgctaatcctgacaatttac 8997935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 150 - 247
Target Start/End: Original strand, 31032137 - 31032231
Alignment:
Q  150 tgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgatta 247  Q
    ||||||||||||||||| |||||| | ||||||||||||||||   ||| ||||||||||||||| ||||||||| ||||||||||| |||||||||||    
T  31032137 tgttcctatatatagagattagtttgagtaactaactctaact---tct-aaccaagctactaaccctagtttacttatcaactaactatagttgatta 31032231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 503 - 578
Target Start/End: Original strand, 37542227 - 37542303
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||   ||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||    
T  37542227 ttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtccctttaatcgctaatcctggcaatttac 37542303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 496 - 578
Target Start/End: Original strand, 6471686 - 6471769
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||| ||||||||||||||||  |||||||||||||||||||| ||||| ||||  | ||||||||||||||||||||||||    
T  6471686 tttaggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatgagtctctataatcgctaatcctggcaatttac 6471769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 498 - 578
Target Start/End: Original strand, 23505050 - 23505131
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||| || |  |||||||||||||||||||| |||||| ||||||||||| ||||||| |||||||||||    
T  23505050 taggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccatgtaattgctaatcttggcaatttac 23505131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 25249105 - 25249002
Alignment:
Q  148 agtgttcctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactctagtttac---ctatcaactaaccatagttg 243  Q
    ||||||||||||||||||| |||||| | ||||||| || |||||||||  ||||||||||||||||||||||||||    |||||| |||| |||||||    
T  25249105 agtgttcctatatatagagattagtttgagtaactacctttaactaacttctaaccaagctactaactctagtttacttattatcaattaactatagttg 25249006  T
Q  244 atta 247  Q
    ||||    
T  25249005 atta 25249002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 577
Target Start/End: Complemental strand, 11675093 - 11675013
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||||||||||||| || |  |||||||||||||||||||| |||||| |||| |||||| ||||||||||||||||||    
T  11675093 taggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaattta 11675013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 499 - 578
Target Start/End: Complemental strand, 15230358 - 15230278
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||| |  |||||||||||| ||||||| ||||||||||| |||||||||||||| || ||||||||    
T  15230358 aggcttaatgatgtgttttgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcttgacaatttac 15230278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 503 - 578
Target Start/End: Complemental strand, 38003829 - 38003753
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||  ||||||||||||||||||||||||||    
T  38003829 ttaatgatgtgtttcgtccttgcaattagtcgtaatttaaaaattagtctctgtaatcgctaatcctggcaatttac 38003753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 499 - 578
Target Start/End: Complemental strand, 41354000 - 41353920
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||||  |||  ||||||||||||||| ||||||||||| ||||||| ||||||||| ||||||||    
T  41354000 aggcttaatgatgtgtttcgtccttataattaggcgtcatttaaaaattagtccctgtaatcactaatcctgacaatttac 41353920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 496 - 578
Target Start/End: Complemental strand, 23507857 - 23507774
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaatta-gtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||| || |  |||||||||||||||||||||||| || |||| |||||| ||||||||| |||||||||    
T  23507857 tttaggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaatacgtccctgtaattgctaatccttgcaatttac 23507774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 500 - 578
Target Start/End: Complemental strand, 25124989 - 25124910
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||| ||||||||||  |||||||||||| ||||||| ||||||||||  ||||||||||||| ||||||||||||    
T  25124989 ggcttaatcatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtctctgtaatcgctaattctggcaatttac 25124910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 496 - 577
Target Start/End: Complemental strand, 3041857 - 3041775
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||||||| |||||||||| ||||||||||||||||| ||||| |||| | |||| |||||| ||||||||||||| ||||    
T  3041857 tttaggcttattgatgtgtttagctcttgcaattaggcggcatttaaaaactcgtccctgtaattgctaatcctggcatttta 3041775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 496 - 577
Target Start/End: Complemental strand, 38845700 - 38845618
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||||||| |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  38845700 tttaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 38845618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 36535971 - 36536035
Alignment:
Q  155 ctatatatagagtttagtt-gtgtaactaactctaactaactcttaaccaagctactaactctag 218  Q
    |||||||||||| |||||| | ||||||||||||||||||||  |||||||||||||||||||||    
T  36535971 ctatatatagagattagtttgagtaactaactctaactaacttctaaccaagctactaactctag 36536035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 499 - 577
Target Start/End: Complemental strand, 2266890 - 2266811
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||| |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  2266890 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 2266811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 495 - 577
Target Start/End: Original strand, 11674690 - 11674773
Alignment:
Q  495 atttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||||||||||||||| || |  |||||||||||||||| ||| |||||| |||| |||||| | ||||||||||||||||    
T  11674690 atttaggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaattta 11674773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 521 - 578
Target Start/End: Complemental strand, 40318371 - 40318313
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||  ||||||| ||||||||||||||||||||||||||||||||||    
T  40318371 cttgcaattaggggttgtttaaaaattagtccatgtaatcgctaatcctggcaatttac 40318313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 497 - 577
Target Start/End: Complemental strand, 35450009 - 35449928
Alignment:
Q  497 ttaggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||||| |||||| |||  | |||||||||||||| ||||||||| || ||||||||||| ||||||||||||| ||||    
T  35450009 ttaggcttattgatgtatttatcccttgcaattaggcggcatttaaaaattcgtccatgtaattgctaatcctggcatttta 35449928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 497 - 577
Target Start/End: Original strand, 44406854 - 44406935
Alignment:
Q  497 ttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||| ||| |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  44406854 ttaggtttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 44406935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 500 - 544
Target Start/End: Complemental strand, 6472441 - 6472397
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa 544  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  6472441 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaa 6472397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 499 - 577
Target Start/End: Original strand, 2266491 - 2266570
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||| |||||||||| || |||||||||||||| ||||| |||||| |||  |||||| ||||||||||||| ||||    
T  2266491 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtctctgtaattgctaatcctggcatttta 2266570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 507 - 577
Target Start/End: Original strand, 3041463 - 3041534
Alignment:
Q  507 tgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||||||| || |||||||||| ||| ||||||||| || ||||||||||| ||||||||||||| ||||    
T  3041463 tgatgtgtttagcccttgcaattaagcggcatttaaaaattcgtccatgtaattgctaatcctggcatttta 3041534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 578
Target Start/End: Complemental strand, 8316995 - 8316937
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || |||| ||||||||||||||||||||||||||    
T  8316995 cttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttac 8316937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 578
Target Start/End: Complemental strand, 16388933 - 16388875
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||||||||||| || || |||||||| |||||||||||||||||||    
T  16388933 cttgcaattaggggtcatttaaaaattggttcatgtaattgctaatcctggcaatttac 16388875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 503 - 579
Target Start/End: Original strand, 27500092 - 27500169
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttact 579  Q
    |||||||| |||||||  ||||||||||  |||||||||||| |||||||||| |||||||||| ||| ||| |||||    
T  27500092 ttaatgatatgtttcgtccttgcaattaaacgtcatttaaaaattagtccatgcaatcgctaattctgacaaattact 27500169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 14939654 - 14939603
Alignment:
Q  107 agaatcaatagatttgataaaagatattgaaatgatacatgagtgttcctata 159  Q
    ||||| |||||||| ||||||||||  ||||||||||||||||||||||||||    
T  14939654 agaatgaatagatt-gataaaagatgatgaaatgatacatgagtgttcctata 14939603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 503 - 578
Target Start/End: Original strand, 41353577 - 41353653
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||| |||||||  ||| |||||||||||||||| |||||||||   ||||||||||||||||  ||||||||    
T  41353577 ttaatgatatgtttcgtccttacaattaggcgtcatttaaaaattagtttctgtaatcgctaatcctaacaatttac 41353653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 503 - 577
Target Start/End: Complemental strand, 36325628 - 36325553
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||||||| || |  |||||||||||||||||||| |||||| |||  |||||| | ||||||||||||||||    
T  36325628 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtctctgtaattgttaatcctggcaattta 36325553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 577
Target Start/End: Original strand, 38845306 - 38845377
Alignment:
Q  507 tgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||||||  | |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  38845306 tgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 38845377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 577
Target Start/End: Original strand, 40775649 - 40775728
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||| |||||||||| || |||||||||||||| ||||| |||||| || | |||||| | ||||||||||| ||||    
T  40775649 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgttcctgtaattgttaatcctggcatttta 40775728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 521 - 578
Target Start/End: Complemental strand, 4995063 - 4995006
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||||||||||| || |||| ||||||||||||||||| ||||||||    
T  4995063 cttgcaattaggggtcatttaaaaattggtcc-tgtaatcgctaatcctgacaatttac 4995006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 509 - 578
Target Start/End: Complemental strand, 10749927 - 10749857
Alignment:
Q  509 atgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||  ||||||||||||  |||||||||| || ||||||||||||| |||||||| ||| ||||    
T  10749927 atgtgtttcgtccttgcaattagggatcatttaaaaattggtccatgtaatcgttaatcctgtcaaattac 10749857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 521 - 578
Target Start/End: Complemental strand, 23663921 - 23663863
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || |||  ||||||||||||||||||||||||||    
T  23663921 cttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttac 23663863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 521 - 578
Target Start/End: Complemental strand, 23698651 - 23698593
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||| ||||||| ||| ||||||| || |||| ||||||||||||||||||||||||||    
T  23698651 cttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttac 23698593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 39071697 - 39071755
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || |||| ||||||||||||||||| ||||||||    
T  39071697 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttac 39071755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 500 - 569
Target Start/End: Complemental strand, 40776047 - 40775977
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctg 569  Q
    |||||| ||||||||||  | |||||||||||||| ||||| |||||| |||| |||||| ||||||||||    
T  40776047 ggcttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctg 40775977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 500 - 577
Target Start/End: Complemental strand, 44407254 - 44407176
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||| |||||||||| || |||||||||||||| ||||| ||||||  ||| |||||| ||||||||| ||| ||||    
T  44407254 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcatccctgtaattgctaatcctagcatttta 44407176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 578
Target Start/End: Original strand, 21432695 - 21432772
Alignment:
Q  502 cttaatgatgtgtttcgctcttgcaattaggcgtcat-ttaaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||  ||||||||||| |||||| | ||||||||||  ||||||| |||||  || ||||||||    
T  21432695 cttaatgatgtgtttcgtccttgcaattagacgtcatataaaaattagtctctgtaatcactaattttgacaatttac 21432772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 578
Target Start/End: Complemental strand, 22915744 - 22915707
Alignment:
Q  541 aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  22915744 aaaattggtccatgtaatcgctaatcttggcaatttac 22915707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 29274808 - 29274849
Alignment:
Q  176 gtaactaactctaactaactcttaaccaagctactaactcta 217  Q
    |||| |||||||||||||| | ||||||||||||||||||||    
T  29274808 gtaattaactctaactaacccgtaaccaagctactaactcta 29274849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 523 - 578
Target Start/End: Complemental strand, 2535955 - 2535899
Alignment:
Q  523 tgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||| ||||||||||| || |||| |||||||| |||||||||||| ||||    
T  2535955 tgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattac 2535899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 1e-30; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 41874513 - 41874441
Alignment:
Q  132 attgaaatgatacatgagtgttcctatatatagagtttagttgtgtaactaactctaactaactcttaaccaa 204  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41874513 attgaaatggtacatgagtgttcctatatatagagtttagttgtgtaactaactctaactaactcttaaccaa 41874441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 78 - 247
Target Start/End: Original strand, 17402844 - 17403015
Alignment:
Q  78 tgtgggagataaccatagagactcatagaagaa-tcaatagatttgataaaagatattgaaatga-tacatgagtgttcctatatata-gagtttagtt- 173  Q
    |||||||||||  |||||| |||||| | |||| | |||||||| |||||||||||||||| ||| ||||  |||||||||||||||| ||| ||||||     
T  17402844 tgtgggagatactcatagaaactcattgtagaaatgaatagatt-gataaaagatattgaa-tgagtacaatagtgttcctatatataagagattagttt 17402941  T
Q  174 gtgtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaaccatagttgatta 247  Q
    | ||||||||||||||||||||  ||||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  17402942 gagtaactaactctaactaacttctaaccaaactactaactctagtttacttatcaactaactatagttgatta 17403015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 499 - 579
Target Start/End: Complemental strand, 40788847 - 40788766
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttact 579  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  40788847 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttact 40788766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 496 - 578
Target Start/End: Original strand, 13948776 - 13948859
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||||||  ||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||    
T  13948776 tttaggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccatgtaatcgctaatcttggcaatttac 13948859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 35244178 - 35244113
Alignment:
Q  123 ataaaagat-attgaaatgatacatgagtgttcctatatatagagtttagttgtgtaactaactct 187  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35244178 ataaaagatgattgaaatgatacatgagtgttcctatatatagagtttagttgtgtaactaactct 35244113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 499 - 578
Target Start/End: Original strand, 3469199 - 3469279
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||||   ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  3469199 aggcttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtccatgtaatcactaatcctggcaatttac 3469279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 503 - 578
Target Start/End: Complemental strand, 32306847 - 32306771
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  32306847 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgctaatcctggcaatttac 32306771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 499 - 578
Target Start/End: Complemental strand, 37778700 - 37778620
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||    
T  37778700 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatttac 37778620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 496 - 578
Target Start/End: Complemental strand, 3469630 - 3469547
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||| |||||||  |||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||    
T  3469630 tttaggcttaatgatctgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctggcaatttac 3469547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 78 - 235
Target Start/End: Complemental strand, 6789788 - 6789631
Alignment:
Q  78 tgtgggagataaccatagagactcatagaagaatcaatagatttgataaaagatattgaaatga-tacatgagtgttcctatatatagagtttagtt-gt 175  Q
    |||||||||||  |||||| |||||| | ||||| |||||||| || |||||||| |||| ||| ||||  ||| ||||||||||||||| |||||| |     
T  6789788 tgtgggagatactcatagaaactcattgtagaatgaatagatt-gaaaaaagatagtgaa-tgagtacaatagtattcctatatatagagattagtttga 6789691  T
Q  176 gtaactaactctaactaactcttaaccaagctactaactctagtttacctatcaactaac 235  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| || |||| ||||||    
T  6789690 gtaactaactctaactaacttctaaccaagctactaactctagttcacttatccactaac 6789631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 499 - 583
Target Start/End: Complemental strand, 29118965 - 29118880
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttactattg 583  Q
    |||| |||||||||||||||  |||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||| ||||    
T  29118965 aggcataatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcactgtaatcgctaatcctggcaatttaccattg 29118880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 499 - 579
Target Start/End: Complemental strand, 33506377 - 33506296
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttact 579  Q
    ||||||||||||||||||||  ||| ||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||    
T  33506377 aggcttaatgatgtgtttcgtcctttcaattaggcgttatttaaaaattagtccctgtaatcgctaatcctggcaatttact 33506296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 35243935 - 35244000
Alignment:
Q  123 ataaaagat-attgaaatgatacatgagtgttcctatatatagagtttagttgtgtaactaactct 187  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  35243935 ataaaagatgattgaaatgatacatgagtgttcctatatatagagtttagttgtgtaattaactct 35244000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 499 - 578
Target Start/End: Original strand, 32306423 - 32306503
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||| |||||||||||||||| || ||||||||    
T  32306423 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcatgtaatcgctaatcttgacaatttac 32306503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 499 - 574
Target Start/End: Complemental strand, 52032566 - 52032490
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaat 574  Q
    ||||||||||||||||||||  ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||    
T  52032566 aggcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaatcgctaatcctggcaat 52032490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 500 - 573
Target Start/End: Complemental strand, 42855733 - 42855659
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaa 573  Q
    ||||||||||||||||| || |||||||||||||||||||| |||||||||||||||| ||||||||||| ||||    
T  42855733 ggcttaatgatgtgtttagcccttgcaattaggcgtcatttaaaaattagtccatgtattcgctaatccttgcaa 42855659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 502 - 578
Target Start/End: Original strand, 29118529 - 29118606
Alignment:
Q  502 cttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||  |||||||||| ||||||||| ||||||||||| ||||||||||||| ||||||||||||    
T  29118529 cttaatgatgtgtttcgtccttgcaattatgcgtcatttaaaaattagtccctgtaatcgctaattctggcaatttac 29118606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 502 - 578
Target Start/End: Complemental strand, 29686364 - 29686287
Alignment:
Q  502 cttaatgatgtgtttcgctcttgcaattaggcgtca-tttaaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||  ||||||||||||||||| |||||||||||||  ||||||| ||||||||||||||||||    
T  29686364 cttaatgatgtgtttcgtccttgcaattaggcgtcattttaaaattagtcattgtaatcactaatcctggcaatttac 29686287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 503 - 578
Target Start/End: Original strand, 3596112 - 3596188
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||  ||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||||    
T  3596112 ttaatgatgtgtttcgtccttgcaattaggcgtgatttaaaaattagtcaatgtaatcgctaatcctgacaatttac 3596188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 502 - 577
Target Start/End: Original strand, 29685943 - 29686019
Alignment:
Q  502 cttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||||||| |||||  |||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||    
T  29685943 cttaatgatgtatttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaattta 29686019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 499 - 578
Target Start/End: Original strand, 47551492 - 47551572
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||||  |||||||||||  ||||||| ||||||||||| ||||||||||||| ||||||||||||    
T  47551492 aggcttaatgatgtgtttcgtccttgcaattagatgtcatttaaaaattagtccctgtaatcgctaatactggcaatttac 47551572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 500 - 578
Target Start/End: Original strand, 10294567 - 10294646
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||  |||||||||||||||||||| ||||||||||| |||||| ||||||| || ||||||||    
T  10294567 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcatgacaatttac 10294646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 496 - 578
Target Start/End: Original strand, 11910695 - 11910778
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||| |||||||||||||||||  ||||||||||| |||||||| ||||||| ||| |||||||||||||||| |||||||||    
T  11910695 tttagtcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattaatccctgtaatcgctaatcctagcaatttac 11910778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 35643872 - 35643930
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  35643872 cttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttac 35643930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 496 - 577
Target Start/End: Original strand, 36314294 - 36314376
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||||||||||||||| || |  |||||||||||||||||||| |||||| |||| |||||| ||||||||||||||||||    
T  36314294 tttaggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaattta 36314376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 497 - 578
Target Start/End: Original strand, 52032135 - 52032217
Alignment:
Q  497 ttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||| |||||||||||||| |  |||||||||||||||||||| ||||||| ||| |||||||||||||||| |||||||||    
T  52032135 ttaggtttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattaatccttgtaatcgctaatcctagcaatttac 52032217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 498 - 578
Target Start/End: Complemental strand, 33156424 - 33156343
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||| ||||||||||||||||  |||||||||||||||||||| ||||||||||  |||||||| ||||| |||||||||||    
T  33156424 taggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcattgtaatcgttaatcttggcaatttac 33156343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 495 - 577
Target Start/End: Original strand, 8041611 - 8041694
Alignment:
Q  495 atttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||||||| |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  8041611 atttaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 8041694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 496 - 577
Target Start/End: Original strand, 10770486 - 10770568
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||| ||||||||||| || |  |||||||||||||||||||| |||||| |||| |||||| ||||||||||||||||||    
T  10770486 tttaggtttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaattta 10770568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 499 - 578
Target Start/End: Complemental strand, 10294986 - 10294906
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||||  |||||||| || ||| |||||||| ||||| | |||||||||||||||| |||||||||    
T  10294986 aggcttaatgatgtgtttcgtccttgcaatcagacgtaatttaaaaattagttcctgtaatcgctaatcctcgcaatttac 10294906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 502 - 573
Target Start/End: Original strand, 33506180 - 33506252
Alignment:
Q  502 cttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaa 573  Q
    |||||||||||||||||  |||||||||||||||||||| ||||||||| | | ||||||||||| |||||||    
T  33506180 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctataatcgctaattctggcaa 33506252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 496 - 578
Target Start/End: Original strand, 41421968 - 41422051
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtca-tttaaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||| ||||||||||||||||  ||||||||||||||||| || ||||||||| | |||||||| ||||| || ||||||||    
T  41421968 tttaggtttaatgatgtgtttcgtccttgcaattaggcgtcagttaaaaattagttcctgtaatcgttaatcttgacaatttac 41422051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 2796200 - 2796258
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||||||||||| || |||| ||||||||||||||||||||||||||    
T  2796200 cttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcctggcaatttac 2796258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 496 - 569
Target Start/End: Original strand, 4322588 - 4322661
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctg 569  Q
    |||||||||||||||||||||| | | |||||||||||||| ||| |||||| |||| |||||||||||||||||    
T  4322588 tttaggcttaatgatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtcc-tgtaatcgctaatcctg 4322661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 495 - 544
Target Start/End: Complemental strand, 13949126 - 13949077
Alignment:
Q  495 atttaggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa 544  Q
    |||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  13949126 attttggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaa 13949077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 497 - 577
Target Start/End: Complemental strand, 48322777 - 48322696
Alignment:
Q  497 ttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||||||||||||| || |  |||||||||||||||| ||| |||||| |||| |||||| | ||||||||||||||||    
T  48322777 ttaggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaattta 48322696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 498 - 577
Target Start/End: Complemental strand, 8042015 - 8041935
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaa-attagtccatgtaatcgctaatcctggcaattta 577  Q
    |||| ||| |||||||||| || |||||||||||||| |||||||| ||| |||| |||||| ||||||||||||| ||||    
T  8042015 taggtttattgatgtgtttagcccttgcaattaggcggcatttaaatattcgtccctgtaattgctaatcctggcatttta 8041935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 498 - 577
Target Start/End: Original strand, 48322375 - 48322455
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||||||||||||| || |  ||||||||||| | |||||||||| || |||| |||||| ||||||||||||||||||    
T  48322375 taggcttaatgatgtgattagtccttgcaattagacatcatttaaaaattcgtccctgtaattgctaatcctggcaattta 48322455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 503 - 573
Target Start/End: Complemental strand, 4323627 - 4323556
Alignment:
Q  503 ttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaa 573  Q
    |||| |||||||||| | | |||||||||||||| ||||||| || |||| |||||||||||||||||||||    
T  4323627 ttaaggatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcctggcaa 4323556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 234
Target Start/End: Complemental strand, 20327304 - 20327181
Alignment:
Q  114 atagatttgataaaagatatt-gaaatgatac-atgagtgttcctatatatagagt--ttagtt-gtgtaactaactctaactaactcttaaccaagcta 208  Q
    |||||||| |||||||||| | |||||||||| |||||||||| |||||||||||   |||||| | ||||| |||| ||||| ||| ||||||||||||    
T  20327304 atagattt-ataaaagataatagaaatgatacgatgagtgttcttatatatagagagattagtttgagtaaccaactataacttact-ttaaccaagcta 20327207  T
Q  209 ctaactctagtttacctatcaactaa 234  Q
    |||| ||||||| |||| ||||||||    
T  20327206 ctaagtctagttaacctttcaactaa 20327181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 500 - 577
Target Start/End: Complemental strand, 36314695 - 36314617
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||||||||||| || |  |||||||||||||||| ||| |||||| |||| |||||| | ||||||||||||||||    
T  36314695 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaattta 36314617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 496 - 577
Target Start/End: Original strand, 54466419 - 54466501
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||| ||| |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| | ||||||||||| ||||    
T  54466419 tttaggtttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcatttta 54466501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 522 - 578
Target Start/End: Complemental strand, 33689785 - 33689728
Alignment:
Q  522 ttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||| ||| ||||||| || || ||||||||||||||||||||||||||||    
T  33689785 ttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttac 33689728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 498 - 578
Target Start/End: Original strand, 40788418 - 40788499
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||| |||||||||||||||   |||||||||| |||| |||| ||||||||||| | ||||||||||| ||| ||||||||    
T  40788418 tagggttaatgatgtgtttcttccttgcaattaagcgttatttaaaaattagtccctctaatcgctaattctgacaatttac 40788499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 195
Target Start/End: Complemental strand, 1140100 - 1140052
Alignment:
Q  148 agtgttcctatatatagagtttag-ttgtgtaactaactctaactaact 195  Q
    ||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  1140100 agtgttcctatatatagagattagtttgagtaactaactctaactaact 1140052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 498 - 577
Target Start/End: Complemental strand, 10770890 - 10770810
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||| ||||||||||| || |  ||| |||||||||||||||| |||||| |||| |||||| | ||||||||||||||||    
T  10770890 taggtttaatgatgtgattagtccttacaattaggcgtcatttaaaaattcgtccctgtaattgttaatcctggcaattta 10770810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 9032760 - 9032819
Alignment:
Q  72 tattcgtgtgggagataaccatagagactcatagaagaatcaatagatttgataaaagat 131  Q
    ||||| ||||||||||| ||||||| |||||||| ||||  |||||||| ||||||||||    
T  9032760 tattcatgtgggagatacccatagaaactcatagtagaaggaatagattggataaaagat 9032819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 234
Target Start/End: Complemental strand, 20302760 - 20302639
Alignment:
Q  114 atagatttgataaaagatattg-aaatgatac-atgagtgttcctatatatagagtttag-ttgtgtaactaactctaactaactcttaaccaagctact 210  Q
    |||||||| |||||||||| || ||||| ||| |||||||||| ||||||||||| |||| |||  |||| |||| ||||| ||| |||||||| |||||    
T  20302760 atagattt-ataaaagataatggaaatggtacgatgagtgttcttatatatagagattagtttgaataaccaactataacttact-ttaaccaatctact 20302663  T
Q  211 aactctagtttacctatcaactaa 234  Q
    || ||||||| |||| ||||||||    
T  20302662 aagtctagttaacctttcaactaa 20302639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 577
Target Start/End: Complemental strand, 54466813 - 54466742
Alignment:
Q  507 tgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||||||| || |||||||||||||| ||||| |||||| |||| |||||| | ||||||||||| ||||    
T  54466813 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattggtaatcctggcatttta 54466742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 521 - 578
Target Start/End: Complemental strand, 9294365 - 9294307
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || |||| | ||||||||||||||||||||||||    
T  9294365 cttgcaattaggggtcgtttaaaaattggtccctataatcgctaatcctggcaatttac 9294307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 521 - 578
Target Start/End: Complemental strand, 19741299 - 19741241
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || |||| |||||||||||||| |||||||||||    
T  19741299 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttac 19741241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 40758168 - 40758225
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || ||||||||||||||||||||| |||||||||    
T  40758168 cttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcct-gcaatttac 40758225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 578
Target Start/End: Complemental strand, 10307759 - 10307722
Alignment:
Q  541 aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  10307759 aaaattagtctctgtaatcgctaatcctggcaatttac 10307722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 523 - 578
Target Start/End: Complemental strand, 21186100 - 21186044
Alignment:
Q  523 tgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||| ||||||||||| || || |||||||||| |||||||||||| ||||    
T  21186100 tgcaattaggggtcatttaaaaattggtacatgtaatcgttaatcctggcaaattac 21186044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 523 - 578
Target Start/End: Complemental strand, 23276388 - 23276332
Alignment:
Q  523 tgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||| ||||||||||| || |||| ||||||||||||||| ||||| ||||    
T  23276388 tgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcccggcaaattac 23276332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 60; Significance: 3e-25; HSPs: 2)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 496 - 578
Target Start/End: Original strand, 916 - 999
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||||||||  ||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||    
T  916 tttaggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccatgtaatcgctaatcttggcaatttac 999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 495 - 544
Target Start/End: Complemental strand, 1266 - 1217
Alignment:
Q  495 atttaggcttaatgatgtgtttcgctcttgcaattaggcgtcatttaaaa 544  Q
    |||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  1266 attttggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaa 1217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 498 - 578
Target Start/End: Complemental strand, 11568 - 11487
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||||||||||||||||   |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  11568 taggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttac 11487  T

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Target: scaffold0328; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 498 - 578
Target Start/End: Original strand, 11138 - 11219
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcat-ttaaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||| ||||||||||||||||   |||||||||| |||||| | ||||||||||  ||| |||||||||| |||||||||||    
T  11138 taggtttaatgatgtgtttcgtcgttgcaattagtcgtcatctaaaaattagtctctgtgatcgctaatcttggcaatttac 11219  T

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Target: scaffold0388 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 495 - 578
Target Start/End: Complemental strand, 12670 - 12586
Alignment:
Q  495 atttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||||| ||||||||||||||||  |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||    
T  12670 atttaggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttac 12586  T

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Target: scaffold0599 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 496 - 578
Target Start/End: Original strand, 2389 - 2472
Alignment:
Q  496 tttaggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    ||||| |||||||||||||||||  ||||||||||| |||||||| ||||||| ||| |||||||||||||||| |||||||||    
T  2389 tttagtcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattaatccctgtaatcgctaatcctagcaatttac 2472  T

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Target: scaffold0205 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 499 - 577
Target Start/End: Original strand, 21008 - 21087
Alignment:
Q  499 aggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    ||||||||||||||| || |  |||||||||||||||||||| |||||| |||| |||||| ||||||||| ||||||||    
T  21008 aggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaattta 21087  T

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Target: scaffold0042 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 502 - 578
Target Start/End: Complemental strand, 12204 - 12127
Alignment:
Q  502 cttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||||||||  ||||||||||  |||||||| ||||||| |||  ||||||||||||||| |||||||||    
T  12204 cttaatgatgtgtttcgtccttgcaattaaacgtcatttaaaaattaatcccagtaatcgctaatcctagcaatttac 12127  T

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Target: scaffold0024 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 498 - 577
Target Start/End: Complemental strand, 141993 - 141913
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||||||| |||||||||| || |||||||||||||| ||||| ||||||  ||| |||||| ||||||||||||| ||||    
T  141993 taggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcatccctgtaattgctaatcctggcatttta 141913  T

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Target: scaffold0024; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 498 - 577
Target Start/End: Original strand, 141592 - 141672
Alignment:
Q  498 taggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctggcaattta 577  Q
    |||| ||| |||||||||| || ||||||||||| || ||||| |||||| |||| |||||| ||||||||||||| ||||    
T  141592 taggtttattgatgtgtttagcccttgcaattagacggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 141672  T

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Target: scaffold0031 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 68986 - 69044
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||||||||||| || |||| ||||||| ||||||||||||||||||    
T  68986 cttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttac 69044  T

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Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 139693 - 139751
Alignment:
Q  521 cttgcaattaggcgtcatttaaaa-ttagtccatgtaatcgctaatcctggcaatttac 578  Q
    |||||||||||| ||| ||||||| || |||| ||||||||||||||||||||||||||    
T  139693 cttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttac 139751  T

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Target: scaffold0559 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 500 - 569
Target Start/End: Original strand, 1233 - 1303
Alignment:
Q  500 ggcttaatgatgtgtttcgctcttgcaattaggcgtcattt-aaaattagtccatgtaatcgctaatcctg 569  Q
    |||||| ||||||||||  | |||||||||||||| ||||| |||||| |||| |||||| ||||||||||    
T  1233 ggcttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctg 1303  T

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