View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10200_low_5 (Length: 483)
Name: NF10200_low_5
Description: NF10200
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10200_low_5 |
 |  |
|
| [»] scaffold0770 (2 HSPs) |
 |  |  |
|
| [»] scaffold0029 (4 HSPs) |
 |  |  |
|
| [»] scaffold0503 (2 HSPs) |
 |  |  |
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| [»] scaffold0014 (1 HSPs) |
 |  |  |
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| [»] scaffold0484 (2 HSPs) |
 |  |  |
|
| [»] scaffold0077 (1 HSPs) |
 |  |  |
|
| [»] scaffold0094 (2 HSPs) |
 |  |  |
|
| [»] scaffold0755 (1 HSPs) |
 |  |  |
|
| [»] scaffold0067 (1 HSPs) |
 |  |  |
|
| [»] scaffold1575 (1 HSPs) |
 |  |  |
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| [»] scaffold0815 (1 HSPs) |
 |  |  |
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| [»] scaffold1271 (1 HSPs) |
 |  |  |
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| [»] scaffold0269 (1 HSPs) |
 |  |  |
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| [»] scaffold0182 (1 HSPs) |
 |  |  |
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| [»] scaffold0435 (1 HSPs) |
 |  |  |
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| [»] scaffold0034 (1 HSPs) |
 |  |  |
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| [»] scaffold1855 (1 HSPs) |
 |  |  |
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| [»] scaffold0362 (1 HSPs) |
 |  |  |
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| [»] scaffold0101 (2 HSPs) |
 |  |  |
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| [»] scaffold1761 (1 HSPs) |
 |  |  |
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| [»] scaffold0422 (1 HSPs) |
 |  |  |
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Alignment Details
Target: chr4 (Bit Score: 111; Significance: 8e-56; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 310 - 472
Target Start/End: Original strand, 15879416 - 15879578
Alignment:
| Q |
310 |
acctttggatgaacccggttgtttgctgttgtttgcgacggcaacagatgtgttgtagttgtggttggcgacggttctgtggtgtgtccagtttggaagt |
409 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||| |||| |||||| ||||||| |||||||||| |
|
|
| T |
15879416 |
acctttggatgaacccggttgtttgctgttgtttgtgacgacaacgaatgtgttgtagttgtggttggtgacgactctgtgatgtgtccggtttggaagt |
15879515 |
T |
 |
| Q |
410 |
gcggctttgagttaatgttgtttcttagtgatgtgcgattttggcttcttgtgtttcctctgt |
472 |
Q |
| |
|
||||||| ||||| |||||||| ||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
15879516 |
gcggcttcgagttgatgttgttccttagtgatgtgcgattctggcttcttgtgtttcctctgt |
15879578 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 181 - 307
Target Start/End: Original strand, 15567000 - 15567129
Alignment:
| Q |
181 |
ggaaaggatggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaacttatattt---annnnnnnnggttccttc |
277 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| | ||||||||| |
|
|
| T |
15567000 |
ggaaaggatggggtttcggcggcagttggccggccagtgtggcggcaccaccgcgccggaaccctaacaacttatttttttgatttttttcggttccttc |
15567099 |
T |
 |
| Q |
278 |
tacttgttcttttctcctctactcgattct |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
15567100 |
tacttgttcttttctcctctactcgattct |
15567129 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 181 - 307
Target Start/End: Original strand, 15579645 - 15579774
Alignment:
| Q |
181 |
ggaaaggatggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaacttatattt---annnnnnnnggttccttc |
277 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||| | ||||||||| |
|
|
| T |
15579645 |
ggaaaggatggggttccggcggcagttggtcggccagtgcggcggcaccatcgcgccggaaccctaacaacttatttttttgattttttttggttccttc |
15579744 |
T |
 |
| Q |
278 |
tacttgttcttttctcctctactcgattct |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
15579745 |
tacttgttcttttctcctctactcgattct |
15579774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 18216597 - 18216542
Alignment:
| Q |
191 |
gggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaacccta |
246 |
Q |
| |
|
||||||||||||| ||||| ||||| |||||||| |||||||| |||||||||||| |
|
|
| T |
18216597 |
gggttccggcggcggttggtcggccggtgcggcgacaccaccgtgccggaacccta |
18216542 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0770 (Bit Score: 107; Significance: 2e-53; HSPs: 2)
Name: scaffold0770
Description:
Target: scaffold0770; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 314 - 472
Target Start/End: Complemental strand, 1626 - 1469
Alignment:
| Q |
314 |
ttggatgaacccggttgtttgctgttgtttgcgacggcaacagatgtgttgtagttgtggttggcgacggttctgtggtgtgtccagtttggaagtgcgg |
413 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||| |||||| |||||||||||||| |
|
|
| T |
1626 |
ttggatgaacccggttgtttgctgttgtttgtgacggcaacggatgtgttgtagttgtggttggtgacggttctgtgatgtgtctggtttggaagtgcgg |
1527 |
T |
 |
| Q |
414 |
ctttgagttaatgttgtttcttagtgatgtgcgattttggcttcttgtgtttcctctgt |
472 |
Q |
| |
|
||| |||| |||||||| ||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
1526 |
cttcaagttgatgttgttccttagtgatgtgcgattctggctt-ttgtgtttcctctgt |
1469 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0770; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 1812 - 1760
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaacc |
243 |
Q |
| |
|
|||||||||||||||||||||||||| || ||||||| |||| |||||||||| |
|
|
| T |
1812 |
ggggttccggcggcagttggccggccggtacggcggc-gcaccacgccggaacc |
1760 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 107; Significance: 2e-53; HSPs: 4)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 314 - 472
Target Start/End: Complemental strand, 99930 - 99773
Alignment:
| Q |
314 |
ttggatgaacccggttgtttgctgttgtttgcgacggcaacagatgtgttgtagttgtggttggcgacggttctgtggtgtgtccagtttggaagtgcgg |
413 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||| |||||| |||||||||||||| |
|
|
| T |
99930 |
ttggatgaacccggttgtttgctgttgtttgtgacggcaacggatgtgttgtagttgtggttggtgacggttctgtgatgtgtctggtttggaagtgcgg |
99831 |
T |
 |
| Q |
414 |
ctttgagttaatgttgtttcttagtgatgtgcgattttggcttcttgtgtttcctctgt |
472 |
Q |
| |
|
||| |||| |||||||| ||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
99830 |
cttcaagttgatgttgttccttagtgatgtgcgattctggctt-ttgtgtttcctctgt |
99773 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 21116 - 21049
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaacttatattt |
259 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
21116 |
ggggttccggcggtggttggccggccagtgcggcggcgccaccgcgccggaacccta--aacttatattt |
21049 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 34857 - 34790
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaacttatattt |
259 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
34857 |
ggggttccggcggtggttggccggccagtgcggcggcgccaccgcgccggaacccta--aacttatattt |
34790 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 100116 - 100064
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaacc |
243 |
Q |
| |
|
|||||||||||||||||||||||||| || ||||||| |||| |||||||||| |
|
|
| T |
100116 |
ggggttccggcggcagttggccggccggtacggcggc-gcaccacgccggaacc |
100064 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 99; Significance: 1e-48; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 310 - 472
Target Start/End: Original strand, 24487277 - 24487439
Alignment:
| Q |
310 |
acctttggatgaacccggttgtttgctgttgtttgcgacggcaacagatgtgttgtagttgtggttggcgacggttctgtggtgtgtccagtttggaagt |
409 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||| |||||||||||| |||||| ||||||| || |
|
|
| T |
24487277 |
acctttggatgaacccggttgtttgttgttgtttgtgacggcaacggatgtgttgtggttgtggttggtgacggttctgtgatgtgtctggtttggaggt |
24487376 |
T |
 |
| Q |
410 |
gcggctttgagttaatgttgtttcttagtgatgtgcgattttggcttcttgtgtttcctctgt |
472 |
Q |
| |
|
|| |||| ||||| |||||||| ||||| ||||||||||| ||| |||||||||||||||||| |
|
|
| T |
24487377 |
gcagcttcgagttgatgttgttccttagggatgtgcgattctggattcttgtgtttcctctgt |
24487439 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 15708123 - 15708054
Alignment:
| Q |
186 |
ggatggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaacttat |
255 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||| |
|
|
| T |
15708123 |
ggatggggttccggcggtggttggccggccagtgcggcggcgccaccgcgccggaaccctaacagcttat |
15708054 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0503 (Bit Score: 88; Significance: 4e-42; HSPs: 2)
Name: scaffold0503
Description:
Target: scaffold0503; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 310 - 472
Target Start/End: Original strand, 1256 - 1431
Alignment:
| Q |
310 |
acctttggatgaacccggttgtttgctgttgtttgcgacggcaacagatgtgttgtagttgtggttggcgacggttctgtggtgt-------------gt |
396 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||| ||| || |
|
|
| T |
1256 |
acctttggatgaacccggttgtttgctgttgtttgtgacggcaacggatgtgttgtagttgtggttggtgacggttctgtgatgtgtccggtttggaagt |
1355 |
T |
 |
| Q |
397 |
ccagtttggaagtgcggctttgagttaatgttgtttcttagtgatgtgcgattttggcttcttgtgtttcctctgt |
472 |
Q |
| |
|
|| |||||||||||| |||| ||||| |||||||| ||||||||||||||||| |||||||||||||||| ||||| |
|
|
| T |
1356 |
ccggtttggaagtgcagcttcgagttgatgttgttccttagtgatgtgcgattctggcttcttgtgtttcttctgt |
1431 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0503; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 310 - 472
Target Start/End: Original strand, 5823 - 5998
Alignment:
| Q |
310 |
acctttggatgaacccggttgtttgctgttgtttgcgacggcaacagatgtgttgtagttgtggttggcgacggttctgtggtgt-------------gt |
396 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||| ||| || |
|
|
| T |
5823 |
acctttggatgaacccggttgtttgctgttgtttgtgacggcaacggatgtgttgtagttgtggttggtgacggttctgtgatgtgtccggtttggaagt |
5922 |
T |
 |
| Q |
397 |
ccagtttggaagtgcggctttgagttaatgttgtttcttagtgatgtgcgattttggcttcttgtgtttcctctgt |
472 |
Q |
| |
|
|| |||||||||||| |||| ||||| |||||||| ||||||||||||||||| |||||||||||||||| ||||| |
|
|
| T |
5923 |
ccggtttggaagtgcagcttcgagttgatgttgttccttagtgatgtgcgattctggcttcttgtgtttcttctgt |
5998 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 78; Significance: 4e-36; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 2334951 - 2335048
Alignment:
| Q |
1 |
atcaaagaatcaaaggacaagggtgcgtgggtgcatggtaaggacgtacaaccacgcgtatgggatcaaggaggactatatataggctgtagttcaca |
98 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
2334951 |
atcaaagattcaaaggacaagggtgcgtgggtgcatggtaaggccgtacacccacgcgtatgggatcaaagaggcctatatataggctgtagttcaca |
2335048 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 181 - 255
Target Start/End: Original strand, 2335131 - 2335205
Alignment:
| Q |
181 |
ggaaaggatggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaacttat |
255 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||| |
|
|
| T |
2335131 |
ggaagggatggggttccggcggcggttggccggccagtgtggcggcaccaccgcgccggaaccctaccaacttat |
2335205 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 13186370 - 13186321
Alignment:
| Q |
367 |
gttgtggttggcgacggttctgtggtgtgtccagtttggaagtgcggctt |
416 |
Q |
| |
|
||||||||||| |||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
13186370 |
gttgtggttggtgacggttctgtgatgtgtccggtttggaagtgcggctt |
13186321 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 182 - 307
Target Start/End: Complemental strand, 4685 - 4557
Alignment:
| Q |
182 |
gaaaggatggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaactta---tatttannnnnnnnggttccttct |
278 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| | ||| |||||||||| |
|
|
| T |
4685 |
gaaaggatggggttccggcggcagttggccggccagcgcggcggcaccaccgcgccggagccctaacaacttatttttttttttttttttggttccttct |
4586 |
T |
 |
| Q |
279 |
acttgttcttttctcctctactcgattct |
307 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
4585 |
acttgttcttttctcctctactcgattct |
4557 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 74; Significance: 9e-34; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 181 - 307
Target Start/End: Original strand, 15665416 - 15665546
Alignment:
| Q |
181 |
ggaaaggatggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaacttatatt----tannnnnnnnggttcctt |
276 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| || | |||||||| |
|
|
| T |
15665416 |
ggaaaggatggggttccggcggcagttggccggccagcgcggcggcaccaccgcgccggagccctaacaacttattttttgattttttttttggttcctt |
15665515 |
T |
 |
| Q |
277 |
ctacttgttcttttctcctctactcgattct |
307 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
15665516 |
ctacttgttcttttctcctctactcgattct |
15665546 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 15390418 - 15390510
Alignment:
| Q |
1 |
atcaaagaatcaaaggacaagggtgcgtgggtgcatggtaaggacgtacaaccacgcgtatgggatcaaggaggactatatataggctgtagt |
93 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
15390418 |
atcaaagattcaaaggacaagggtgcgtgggtgcatggtaaggccgtacacccacgcgtatgggatcaaagaggcctatatataggctgtagt |
15390510 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 16324643 - 16324702
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaaca |
249 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
16324643 |
ggggttccggcggtggttggccggccagtgcggcggcgccaccgcgccggaaccctaaca |
16324702 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 18964629 - 18964686
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaa |
247 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
18964629 |
ggggttccggcggtggttggccggccagtgcggcggcgccaccacgccggaaccctaa |
18964686 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 431
Target Start/End: Complemental strand, 18437396 - 18437332
Alignment:
| Q |
367 |
gttgtggttggcgacggttctgtggtgtgtccagtttggaagtgcggctttgagttaatgttgtt |
431 |
Q |
| |
|
||||||||||| ||||||| |||| ||||||| ||||||| ||||||||| ||||| |||||||| |
|
|
| T |
18437396 |
gttgtggttggtgacggttatgtgatgtgtccggtttggacgtgcggcttcgagttgatgttgtt |
18437332 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 20531761 - 20531819
Alignment:
| Q |
190 |
ggggttccggcggcagttggccgg-ccagtgcggcggcaccaccgcgccggaaccctaa |
247 |
Q |
| |
|
||||||||||||| ||||||||| || ||||| ||||||| ||||||||||||||||| |
|
|
| T |
20531761 |
ggggttccggcggtggttggccgggccggtgcgacggcacctccgcgccggaaccctaa |
20531819 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0484 (Bit Score: 73; Significance: 4e-33; HSPs: 2)
Name: scaffold0484
Description:
Target: scaffold0484; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 178 - 307
Target Start/End: Original strand, 10685 - 10816
Alignment:
| Q |
178 |
gatggaaaggatggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaacttatattt--annnnnnnnggttcct |
275 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| | ||||| | |
|
|
| T |
10685 |
gatggaaaggatggggttccggcggcggttggcctgccagtgcggcggcaccaccgcgccggaaccctaacaacttattttttaaatttttttggttctt |
10784 |
T |
 |
| Q |
276 |
tctacttgttcttttctcctctactcgattct |
307 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||| |
|
|
| T |
10785 |
tctacttgttctttcctcctatactcgattct |
10816 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0484; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 10505 - 10602
Alignment:
| Q |
1 |
atcaaagaatcaaaggacaagggtgcgtgggtgcatggtaaggacgtacaaccacgcgtatgggatcaaggaggactatatataggctgtagttcaca |
98 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||| |||| ||||||||||| ||||||||||| |
|
|
| T |
10505 |
atcaaagattcaaaggacaagggtgcatgggtgcatggtaaggccgtacacccacgcgtatgggatcaaagaggcctatatataggttgtagttcaca |
10602 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 70; Significance: 2e-31; HSPs: 14)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 20371715 - 20371812
Alignment:
| Q |
1 |
atcaaagaatcaaaggacaagggtgcgtgggtgcatggtaaggacgtacaaccacgcgtatgggatcaaggaggactatatataggctgtagttcaca |
98 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||||||||||| | |||| |||||||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
20371715 |
atcaaagattcaaaggacaagggtgtgtgggtgcatggtaaggccatacacccacgcgtatgggatcaaagagggctatatataggctgtagttcaca |
20371812 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 20397439 - 20397536
Alignment:
| Q |
1 |
atcaaagaatcaaaggacaagggtgcgtgggtgcatggtaaggacgtacaaccacgcgtatgggatcaaggaggactatatataggctgtagttcaca |
98 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||||||||||| | |||| |||||||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
20397439 |
atcaaagattcaaaggacaagggtgtgtgggtgcatggtaaggccatacacccacgcgtatgggatcaaagagggctatatataggctgtagttcaca |
20397536 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 181 - 259
Target Start/End: Original strand, 7254197 - 7254273
Alignment:
| Q |
181 |
ggaaaggatggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaacttatattt |
259 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||| ||||||||||| |
|
|
| T |
7254197 |
ggaaaggatggggttccggcggtggttggccggccagtgcggcggcgccaccgtgccggaacccta--aacttatattt |
7254273 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 181 - 259
Target Start/End: Original strand, 7261639 - 7261715
Alignment:
| Q |
181 |
ggaaaggatggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaacttatattt |
259 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||| ||||||||||| |
|
|
| T |
7261639 |
ggaaaggatggggttccggcggtggttggccggccagtgcggcggcgccaccgtgccggaacccta--aacttatattt |
7261715 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 26552351 - 26552407
Alignment:
| Q |
191 |
gggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaa |
247 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
26552351 |
gggttccggcggcggttggccggccggtgcggcggcaccaccgcgccggaaccctaa |
26552407 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 191 - 307
Target Start/End: Complemental strand, 29885577 - 29885459
Alignment:
| Q |
191 |
gggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaactta--tatttannnnnnnnggttccttctacttgttctt |
288 |
Q |
| |
|
||||||||| ||| ||||||| ||| ||| |||||| ||||||||||||||||||||||||||| | ||| ||||||||||||||||||| |
|
|
| T |
29885577 |
gggttccggtggcggttggccagcctgtggggcggcgccaccgcgccggaaccctaacaacttatttttttgatttttttggttccttctacttgttctc |
29885478 |
T |
 |
| Q |
289 |
ttctcctctactcgattct |
307 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
29885477 |
ttctcctctactcgattct |
29885459 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 36370318 - 36370377
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaaca |
249 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
36370318 |
ggggttccggcggtggttggccggccagtgcggcggcgccaccgcgccggaaccctaaca |
36370377 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 36994981 - 36995040
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaaca |
249 |
Q |
| |
|
||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||| |
|
|
| T |
36994981 |
ggggttccggcggtggttggccggctagtgcggcggcgccaccgcgccggaaccctaaca |
36995040 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 37008919 - 37008978
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaaca |
249 |
Q |
| |
|
||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||| |
|
|
| T |
37008919 |
ggggttccggcggtggttggccggctagtgcggcggcgccaccgcgccggaaccctaaca |
37008978 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 25449672 - 25449729
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaa |
247 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
25449672 |
ggggttccggcggtggttggccggccagtgcggcggcgccaccacgccggaaccctaa |
25449729 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 191 - 307
Target Start/End: Complemental strand, 29902153 - 29902035
Alignment:
| Q |
191 |
gggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaacttatatttannnnnnnn--ggttccttctacttgttctt |
288 |
Q |
| |
|
||||||||| ||| |||||| || ||| |||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
29902153 |
gggttccggtggcggttggctagcttgtggggcggcgccaccgcgccggaaccctaacaacttatttttttgatttttttggttccttctacttgttctc |
29902054 |
T |
 |
| Q |
289 |
ttctcctctactcgattct |
307 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
29902053 |
ttctcctctactcgattct |
29902035 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 23576589 - 23576645
Alignment:
| Q |
191 |
gggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaa |
247 |
Q |
| |
|
|||||||||| || |||||||| || || |||||||||||||||||||||||||||| |
|
|
| T |
23576589 |
gggttccggcagcggttggccgaccggtacggcggcaccaccgcgccggaaccctaa |
23576645 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 36384261 - 36384305
Alignment:
| Q |
205 |
gttggccggccagtgcggcggcaccaccgcgccggaaccctaaca |
249 |
Q |
| |
|
||||| |||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
36384261 |
gttggacggccagttcggcggcgccaccgcgccggaaccctaaca |
36384305 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 25676874 - 25676931
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaa |
247 |
Q |
| |
|
|||||||||| | | | ||||||||| || |||||||||| ||||||||||||||||| |
|
|
| T |
25676874 |
ggggttccggtgacggctggccggccggtacggcggcacctccgcgccggaaccctaa |
25676931 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 70; Significance: 2e-31; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 35039107 - 35039010
Alignment:
| Q |
1 |
atcaaagaatcaaaggacaagggtgcgtgggtgcatggtaaggacgtacaaccacgcgtatgggatcaaggaggactatatataggctgtagttcaca |
98 |
Q |
| |
|
|||||||| |||||| ||||||||||||||||||||||||||| |||||| ||||||||||| |||||| |||| ||||||||||||||||||||||| |
|
|
| T |
35039107 |
atcaaagattcaaagaacaagggtgcgtgggtgcatggtaaggccgtacacccacgcgtatgagatcaaagaggcctatatataggctgtagttcaca |
35039010 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 21069333 - 21069241
Alignment:
| Q |
8 |
aatcaaaggacaagggtgcgtgggtgcatggtaaggacgtacaaccacgcgtatgggatcaaggaggactatatataggctgtagttcacaga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||| | || || |||||||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
21069333 |
aatcaaaggacaagggtgcgtgggtgcatggtaaggtcgtacacctacacgcatgggatcaaagaggcctatatataggctgtagttcacaga |
21069241 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 39650571 - 39650514
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaa |
247 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
39650571 |
ggggttccggcggtggttggccggccagtgcggcggcgccaccacgccggaaccctaa |
39650514 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 21069193 - 21069126
Alignment:
| Q |
178 |
gatggaaaggatggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccct |
245 |
Q |
| |
|
||||||| |||||||||||||||||| |||||||| | || ||||||| |||||||||||||||||| |
|
|
| T |
21069193 |
gatggaagggatggggttccggcggcggttggccgatcggtacggcggcgccaccgcgccggaaccct |
21069126 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 22935215 - 22935160
Alignment:
| Q |
192 |
ggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaa |
247 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
22935215 |
ggttccggcggtggttggccggccagtgcggcggcgccaccacgccggaaccctaa |
22935160 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 22941179 - 22941124
Alignment:
| Q |
192 |
ggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaa |
247 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
22941179 |
ggttccggcggtggttggccggccagtgcggcggcgccaccacgccggaaccctaa |
22941124 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 22955074 - 22955019
Alignment:
| Q |
192 |
ggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaa |
247 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
22955074 |
ggttccggcggtggttggccggccagtgcggcggcgccaccacgccggaaccctaa |
22955019 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 68; Significance: 4e-30; HSPs: 15)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 15910258 - 15910159
Alignment:
| Q |
1 |
atcaaagaatcaaaggacaagggtgcgtgggtgcatggtaaggacgtacaaccacgcgtatgggatcaaggaggactatatataggctgtagttcacaga |
100 |
Q |
| |
|
||||||| |||||||||| ||||||||||| ||||||| |||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
15910258 |
atcaaaggatcaaaggaccagggtgcgtggatgcatggcaaggccgtacacccacgcgtatgggatcaaagaggcctatatataggctgtagttcacaga |
15910159 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 15924501 - 15924402
Alignment:
| Q |
1 |
atcaaagaatcaaaggacaagggtgcgtgggtgcatggtaaggacgtacaaccacgcgtatgggatcaaggaggactatatataggctgtagttcacaga |
100 |
Q |
| |
|
||||||| |||||||||| ||||||||||| | ||||| |||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
15924501 |
atcaaaggatcaaaggaccagggtgcgtggatccatggcaaggccgtacacccacgcgtatgggatcaaagaggcctatatataggctgtagttcacaga |
15924402 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 190 - 255
Target Start/End: Complemental strand, 21608357 - 21608292
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaacttat |
255 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
21608357 |
ggggttccggcggtggttggccggccagtgcggcggcgccaccgcgccggaaccctaacaacttat |
21608292 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 190 - 255
Target Start/End: Complemental strand, 21616985 - 21616920
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaacttat |
255 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
21616985 |
ggggttccggcggtggttggccggccagtgcggcggcgccaccgcgccggaaccctaacaacttat |
21616920 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 190 - 307
Target Start/End: Complemental strand, 19834335 - 19834215
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaactta---tatttannnnnnnnggttccttctacttgttc |
286 |
Q |
| |
|
|||||||||||||| | ||||||||| ||| |||||| |||||| |||||||||||||||||||| | ||| |||||||||||||||||| |
|
|
| T |
19834335 |
ggggttccggcggcggctggccggccggtgaggcggcgccaccgtgccggaaccctaacaacttattttttttggtttttttggttccttctacttgttc |
19834236 |
T |
 |
| Q |
287 |
ttttctcctctactcgattct |
307 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
19834235 |
ttttctcctctactcgattct |
19834215 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 46372187 - 46372128
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaaca |
249 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
46372187 |
ggggttccggcggtggttggccggccagtgcggcggcgccaccgcgccggaaccctaaca |
46372128 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 46386314 - 46386255
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaaca |
249 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
46386314 |
ggggttccggcggtggttggccggccagtgcggcggcgccaccgcgccggaaccctaaca |
46386255 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 15528075 - 15528132
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaa |
247 |
Q |
| |
|
|||||||||||||||||||||| ||| |||||||||| |||||| ||||||||||||| |
|
|
| T |
15528075 |
ggggttccggcggcagttggccagccggtgcggcggcgccaccgtgccggaaccctaa |
15528132 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 46392468 - 46392524
Alignment:
| Q |
191 |
gggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaa |
247 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||| ||||| |||||||||||||| |
|
|
| T |
46392468 |
gggttccggcggcggttggccggccggtgcggcggcgccaccacgccggaaccctaa |
46392524 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 46400216 - 46400272
Alignment:
| Q |
191 |
gggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaa |
247 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||| ||||| |||||||||||||| |
|
|
| T |
46400216 |
gggttccggcggcggttggccggccggtgcggcggcgccaccacgccggaaccctaa |
46400272 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 15536764 - 15536821
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaa |
247 |
Q |
| |
|
|||||||||||||| ||||||| ||| |||||||||| |||||| ||||||||||||| |
|
|
| T |
15536764 |
ggggttccggcggcggttggccagccggtgcggcggcgccaccgtgccggaaccctaa |
15536821 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 5650848 - 5650904
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaacccta |
246 |
Q |
| |
|
|||||||||||||| | ||||||||| |||||||||| | ||||||||||||||||| |
|
|
| T |
5650848 |
ggggttccggcggcggctggccggccggtgcggcggcgctaccgcgccggaacccta |
5650904 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 431
Target Start/End: Complemental strand, 14252989 - 14252925
Alignment:
| Q |
367 |
gttgtggttggcgacggttctgtggtgtgtccagtttggaagtgcggctttgagttaatgttgtt |
431 |
Q |
| |
|
||||||||||| ||| |||||||| ||||||| |||||||||||||| || ||||| |||||||| |
|
|
| T |
14252989 |
gttgtggttggtgacagttctgtgatgtgtccggtttggaagtgcggattcgagttgatgttgtt |
14252925 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 15924312 - 15924257
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccct |
245 |
Q |
| |
|
|||||||||||||| | ||||||||| |||||||||| |||||| ||||||||||| |
|
|
| T |
15924312 |
ggggttccggcggcggctggccggccggtgcggcggcgccaccgtgccggaaccct |
15924257 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 15609565 - 15609622
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaa |
247 |
Q |
| |
|
|||||||||| ||| | ||||||||| |||||||||| |||||| ||||||||||||| |
|
|
| T |
15609565 |
ggggttccggtggcggctggccggccggtgcggcggcgccaccgtgccggaaccctaa |
15609622 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0077 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0077
Description:
Target: scaffold0077; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 310 - 398
Target Start/End: Complemental strand, 403 - 315
Alignment:
| Q |
310 |
acctttggatgaacccggttgtttgctgttgtttgcgacggcaacagatgtgttgtagttgtggttggcgacggttctgtggtgtgtcc |
398 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||| ||||||| |
|
|
| T |
403 |
acctttggatgaacttggttgtttgctgttgtttgtgacggcaacagatgtgttgtagttgtggttggtgacggctctgtgatgtgtcc |
315 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0094 (Bit Score: 64; Significance: 9e-28; HSPs: 2)
Name: scaffold0094
Description:
Target: scaffold0094; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 29606 - 29705
Alignment:
| Q |
1 |
atcaaagaatcaaaggacaagggtgcgtgggtgcatggtaaggacgtacaaccacgcgtatgggatcaaggaggactatatataggctgtagttcacaga |
100 |
Q |
| |
|
||||||| |||||||||| ||||||||||| | ||||| |||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
29606 |
atcaaaggatcaaaggaccagggtgcgtggatccatggcaaggccgtacacccacgcgtatgggatcaaagaggcctatatataggctgtagttcacaga |
29705 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0094; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 29795 - 29850
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccct |
245 |
Q |
| |
|
|||||||||||||| | ||||||||| |||||||||| || ||| ||||||||||| |
|
|
| T |
29795 |
ggggttccggcggcggctggccggccggtgcggcggcgccgccgtgccggaaccct |
29850 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0755 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0755
Description:
Target: scaffold0755; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 190 - 255
Target Start/End: Complemental strand, 1859 - 1794
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaacttat |
255 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
1859 |
ggggttccggcggtggttggccggccagtgcggcggcgccaccgcgccggaaccctaacaacttat |
1794 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 54; Significance: 8e-22; HSPs: 12)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 15684651 - 15684594
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaa |
247 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15684651 |
ggggttccggcggcggttggccggccagtgcggcggcaccaccgcgccggaaccctaa |
15684594 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 42630345 - 42630410
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaacttat |
255 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
42630345 |
ggggttccggcggtggttggccggccagtgcggcggcgccaccgcgccggaaccctaacaacttat |
42630410 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 255
Target Start/End: Complemental strand, 8810978 - 8810913
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaacttat |
255 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||| |
|
|
| T |
8810978 |
ggggttccggcggtggttggccggccagtgcggcggcgccaccgcgccggaaccctaacagcttat |
8810913 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 255
Target Start/End: Complemental strand, 8818792 - 8818727
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaacttat |
255 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||| |
|
|
| T |
8818792 |
ggggttccggcggtggttggccggccagtgcggcggcgccaccgcgccggaaccctaacagcttat |
8818727 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 255
Target Start/End: Complemental strand, 9461501 - 9461436
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaacttat |
255 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||| |
|
|
| T |
9461501 |
ggggttccggcggtggttggccggccagtgcggcggcgccaccgcgccggaaccctaacagcttat |
9461436 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 255
Target Start/End: Complemental strand, 9475259 - 9475194
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaacttat |
255 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||| |
|
|
| T |
9475259 |
ggggttccggcggtggttggccggccagtgcggcggcgccaccgcgccggaaccctaacagcttat |
9475194 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 16387566 - 16387631
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaacttat |
255 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||| |
|
|
| T |
16387566 |
ggggttccggcggtggttggccggccagtgcggcggcgccaccgcgccggaaccctaacagcttat |
16387631 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 16401693 - 16401758
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaacttat |
255 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||| |
|
|
| T |
16401693 |
ggggttccggcggtggttggccggccagtgcggcggcgccaccgcgccggaaccctaacagcttat |
16401758 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 365
Target Start/End: Original strand, 42017132 - 42017187
Alignment:
| Q |
310 |
acctttggatgaacccggttgtttgctgttgtttgcgacggcaacagatgtgttgt |
365 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |
|
|
| T |
42017132 |
acctttggatgaacccggttgcttgctgttgtttgtgacggcaacagatgtgttgt |
42017187 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 30364113 - 30364178
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaacttat |
255 |
Q |
| |
|
||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||| ||||| |
|
|
| T |
30364113 |
ggggttccggcggtggttggccggccagcgcggcggcgccaccgcgccggaaccctaacagcttat |
30364178 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 30378178 - 30378243
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaacttat |
255 |
Q |
| |
|
||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||| ||||| |
|
|
| T |
30378178 |
ggggttccggcggtggttggccggccagcgcggcggcgccaccgcgccggaaccctaacagcttat |
30378243 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 307
Target Start/End: Complemental strand, 36899235 - 36899197
Alignment:
| Q |
269 |
ggttccttctacttgttcttttctcctctactcgattct |
307 |
Q |
| |
|
||||| ||||||||||||| ||||||||||||||||||| |
|
|
| T |
36899235 |
ggttctttctacttgttctcttctcctctactcgattct |
36899197 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0067 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0067
Description:
Target: scaffold0067; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 43672 - 43737
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaacttat |
255 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||| |||| |
|
|
| T |
43672 |
ggggttccggcggcggttggccggccggtgcggcggcaccaccgcgtcggaaccctatcaatttat |
43737 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1575 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold1575
Description:
Target: scaffold1575; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 181 - 247
Target Start/End: Complemental strand, 984 - 917
Alignment:
| Q |
181 |
ggaaaggatgggg-ttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaa |
247 |
Q |
| |
|
||||||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
984 |
ggaaaggatgggggttccggcggtggttggccggccagtgcggcggcgccaccacgccggaaccctaa |
917 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0815 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0815
Description:
Target: scaffold0815; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 4215 - 4269
Alignment:
| Q |
191 |
gggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccct |
245 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||| |||||||||||||||||| |
|
|
| T |
4215 |
gggttccggcggcggttggccggccggtgcggcggcgccaccgcgccggaaccct |
4269 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1271 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold1271
Description:
Target: scaffold1271; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 1019 - 1075
Alignment:
| Q |
191 |
gggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaa |
247 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
1019 |
gggttccggcggaggttggccggccggtgcggcggcaccaccgtgccggaaccctaa |
1075 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0269 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0269
Description:
Target: scaffold0269; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 194 - 247
Target Start/End: Original strand, 13731 - 13784
Alignment:
| Q |
194 |
ttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaa |
247 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||| ||||| |||||||||||||| |
|
|
| T |
13731 |
ttccggcggcggttggccggccggtgcggcggcgccaccacgccggaaccctaa |
13784 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0182
Description:
Target: scaffold0182; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 6222 - 6156
Alignment:
| Q |
191 |
gggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaacttatattt |
259 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||| |||||| ||| |||||||| ||||||||||| |
|
|
| T |
6222 |
gggttccggcggcggttggccggccggtgcggcggcgccaccgtgccagaacccta--aacttatattt |
6156 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0435 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0435
Description:
Target: scaffold0435; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 7563 - 7619
Alignment:
| Q |
191 |
gggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaa |
247 |
Q |
| |
|
||||||||||||| |||||||| || || ||||||||||||| |||||||||||||| |
|
|
| T |
7563 |
gggttccggcggcggttggccgaccggtacggcggcaccaccacgccggaaccctaa |
7619 |
T |
 |
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Target: scaffold0034 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0034
Description:
Target: scaffold0034; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 118645 - 118701
Alignment:
| Q |
191 |
gggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaa |
247 |
Q |
| |
|
|||||| | |||| ||||||||||| || |||||||||||||||||||||||||||| |
|
|
| T |
118645 |
gggttctgacggcggttggccggccggtacggcggcaccaccgcgccggaaccctaa |
118701 |
T |
 |
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Target: scaffold1855 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold1855
Description:
Target: scaffold1855; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 327 - 261
Alignment:
| Q |
191 |
gggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaacaacttatattt |
259 |
Q |
| |
|
||||||||||| | ||||||||||| |||||||||| |||||| ||||||||| || ||||||||||| |
|
|
| T |
327 |
gggttccggcgacggttggccggccggtgcggcggcgccaccgtgccggaacctta--aacttatattt |
261 |
T |
 |
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Target: scaffold0362 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0362
Description:
Target: scaffold0362; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 3809 - 3866
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaaccctaa |
247 |
Q |
| |
|
|||||||||| ||| | ||||||||| || |||||||||| ||||||||||||||||| |
|
|
| T |
3809 |
ggggttccggtggcggctggccggccggtacggcggcacctccgcgccggaaccctaa |
3866 |
T |
 |
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Target: scaffold0101 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0101
Description:
Target: scaffold0101; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 365
Target Start/End: Original strand, 15923 - 15976
Alignment:
| Q |
310 |
acctttggatgaacccggttgtttgctgttgtttgcgacggcaacagatgtgttgt |
365 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |||||| || |||||||||| |
|
|
| T |
15923 |
acctttggatgaacccggttg--tgctgttgtttgtgacggccacggatgtgttgt |
15976 |
T |
 |
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Target: scaffold0101; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 15735 - 15771
Alignment:
| Q |
190 |
ggggttccggcggcagttggccggccagtgcggcggc |
226 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
15735 |
ggggttccggcggcggttggccggccggtgcggcggc |
15771 |
T |
 |
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Target: scaffold1761 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1761
Description:
Target: scaffold1761; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 574 - 629
Alignment:
| Q |
191 |
gggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaacccta |
246 |
Q |
| |
|
|||||||||||| |||||||| || |||||||||| |||||||| |||||||||| |
|
|
| T |
574 |
gggttccggcggtggttggccgaccggtgcggcggcgccaccgcgtcggaacccta |
629 |
T |
 |
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Target: scaffold0422 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0422
Description:
Target: scaffold0422; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 5671 - 5723
Alignment:
| Q |
191 |
gggttccggcggcagttggccggccagtgcggcggcaccaccgcgccggaacc |
243 |
Q |
| |
|
|||||| |||||| ||||||||||| |||| |||||||| ||||| ||||||| |
|
|
| T |
5671 |
gggttctggcggcggttggccggccggtgcagcggcaccgccgcgtcggaacc |
5723 |
T |
 |
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