View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10201A_low_104 (Length: 296)

Name: NF10201A_low_104
Description: NF10201A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10201A_low_104
NF10201A_low_104
[»] chr8 (37 HSPs)
chr8 (73-290)||(29104329-29104546)
chr8 (169-248)||(32798538-32798617)
chr8 (169-245)||(32797169-32797245)
chr8 (174-248)||(26697838-26697912)
chr8 (169-251)||(28418837-28418919)
chr8 (169-251)||(28420177-28420259)
chr8 (171-248)||(30787606-30787683)
chr8 (171-248)||(42872195-42872272)
chr8 (169-261)||(26696563-26696655)
chr8 (169-237)||(42870844-42870912)
chr8 (169-248)||(22551038-22551116)
chr8 (172-234)||(13197961-13198023)
chr8 (169-243)||(32695286-32695360)
chr8 (171-247)||(30786709-30786785)
chr8 (174-249)||(212717-212792)
chr8 (174-249)||(239462-239537)
chr8 (174-249)||(726340-726415)
chr8 (174-249)||(792817-792892)
chr8 (174-249)||(798841-798916)
chr8 (173-260)||(8570153-8570240)
chr8 (169-248)||(41629739-41629818)
chr8 (169-248)||(44076369-44076448)
chr8 (174-248)||(6397819-6397893)
chr8 (14-51)||(29104568-29104605)
chr8 (173-260)||(211630-211717)
chr8 (173-260)||(240539-240626)
chr8 (173-260)||(725253-725340)
chr8 (173-260)||(793894-793981)
chr8 (174-248)||(6398503-6398577)
chr8 (178-248)||(29103527-29103597)
chr8 (171-248)||(32693863-32693940)
chr8 (169-248)||(4810500-4810579)
chr8 (173-248)||(13116365-13116440)
chr8 (173-248)||(17338076-17338151)
chr8 (169-220)||(45437516-45437567)
chr8 (174-248)||(41630130-41630204)
chr8 (171-203)||(45395000-45395032)
[»] chr3 (31 HSPs)
chr3 (171-285)||(37735339-37735453)
chr3 (173-285)||(37736051-37736162)
chr3 (169-265)||(41544693-41544789)
chr3 (169-248)||(53187590-53187668)
chr3 (169-250)||(18458661-18458742)
chr3 (169-229)||(34819309-34819369)
chr3 (169-248)||(38242522-38242601)
chr3 (169-251)||(50809452-50809534)
chr3 (169-251)||(50866328-50866410)
chr3 (169-245)||(12107992-12108068)
chr3 (169-248)||(18197178-18197257)
chr3 (169-248)||(34818117-34818196)
chr3 (169-248)||(38240937-38241016)
chr3 (169-248)||(40364350-40364429)
chr3 (169-248)||(53194876-53194955)
chr3 (169-251)||(50810837-50810919)
chr3 (169-251)||(50864945-50865027)
chr3 (174-248)||(53420352-53420426)
chr3 (173-260)||(53421755-53421842)
chr3 (169-248)||(53624367-53624446)
chr3 (174-248)||(3208520-3208594)
chr3 (174-248)||(23443463-23443537)
chr3 (173-265)||(36176495-36176588)
chr3 (169-245)||(40244218-40244294)
chr3 (173-244)||(35370948-35371019)
chr3 (173-260)||(42686139-42686226)
chr3 (169-227)||(55328332-55328390)
chr3 (169-228)||(18442283-18442342)
chr3 (169-228)||(19487357-19487416)
chr3 (172-250)||(28909609-28909687)
chr3 (217-290)||(40364829-40364902)
[»] scaffold0078 (1 HSPs)
scaffold0078 (171-284)||(18845-18958)
[»] chr7 (30 HSPs)
chr7 (169-273)||(32602964-32603068)
chr7 (169-249)||(4300053-4300133)
chr7 (169-248)||(40508409-40508488)
chr7 (169-248)||(40509740-40509819)
chr7 (169-250)||(43459486-43459567)
chr7 (169-248)||(22115170-22115249)
chr7 (169-248)||(30333316-30333395)
chr7 (171-248)||(4298746-4298823)
chr7 (169-249)||(11344538-11344615)
chr7 (171-248)||(43460829-43460906)
chr7 (169-250)||(47456379-47456460)
chr7 (169-248)||(6173456-6173535)
chr7 (169-248)||(30310152-30310231)
chr7 (173-248)||(45454073-45454148)
chr7 (171-248)||(47059141-47059218)
chr7 (173-248)||(13564245-13564320)
chr7 (169-248)||(45455378-45455457)
chr7 (169-227)||(30311496-30311554)
chr7 (169-247)||(32256402-32256480)
chr7 (169-250)||(46835706-46835787)
chr7 (171-248)||(47060481-47060558)
chr7 (169-248)||(32255020-32255099)
chr7 (169-248)||(33096900-33096979)
chr7 (173-250)||(22538852-22538929)
chr7 (169-233)||(33779105-33779169)
chr7 (169-248)||(47454368-47454447)
chr7 (173-248)||(22336014-22336089)
chr7 (173-202)||(22337422-22337451)
chr7 (169-206)||(30334685-30334722)
chr7 (208-248)||(24844331-24844371)
[»] chr2 (20 HSPs)
chr2 (175-285)||(36011611-36011721)
chr2 (169-247)||(17459284-17459362)
chr2 (169-248)||(11315964-11316043)
chr2 (169-249)||(43034476-43034556)
chr2 (169-248)||(32470581-32470660)
chr2 (169-248)||(43033113-43033192)
chr2 (169-248)||(17460690-17460769)
chr2 (171-247)||(28561401-28561477)
chr2 (169-236)||(7437779-7437846)
chr2 (169-248)||(11317374-11317453)
chr2 (169-248)||(28562815-28562894)
chr2 (173-260)||(34468993-34469080)
chr2 (169-205)||(32469179-32469215)
chr2 (169-248)||(11547690-11547769)
chr2 (173-248)||(18617012-18617087)
chr2 (173-248)||(29219420-29219495)
chr2 (173-248)||(29332719-29332794)
chr2 (173-290)||(36010612-36010725)
chr2 (171-211)||(6030513-6030553)
chr2 (172-248)||(34512848-34512924)
[»] chr4 (45 HSPs)
chr4 (169-266)||(44501549-44501646)
chr4 (169-247)||(1829784-1829862)
chr4 (171-247)||(49342652-49342728)
chr4 (171-266)||(1190180-1190275)
chr4 (169-248)||(2312488-2312567)
chr4 (169-248)||(42871126-42871205)
chr4 (169-248)||(42810209-42810288)
chr4 (169-248)||(390248-390327)
chr4 (169-248)||(1188874-1188953)
chr4 (173-248)||(4871370-4871445)
chr4 (169-247)||(6348186-6348264)
chr4 (169-287)||(24426370-24426487)
chr4 (169-250)||(52963600-52963681)
chr4 (171-247)||(1588096-1588172)
chr4 (169-248)||(393644-393723)
chr4 (169-248)||(2310954-2311033)
chr4 (169-236)||(6349571-6349638)
chr4 (169-248)||(27847709-27847788)
chr4 (169-248)||(37882865-37882944)
chr4 (179-248)||(49344015-49344085)
chr4 (169-234)||(27850952-27851017)
chr4 (169-248)||(1794442-1794521)
chr4 (169-248)||(1831269-1831348)
chr4 (169-248)||(4129024-4129103)
chr4 (174-245)||(42872308-42872379)
chr4 (173-248)||(54865140-54865214)
chr4 (174-248)||(1587218-1587292)
chr4 (174-248)||(31968398-31968472)
chr4 (173-249)||(15450080-15450156)
chr4 (173-248)||(10168789-10168864)
chr4 (173-260)||(53204396-53204483)
chr4 (169-248)||(54485551-54485630)
chr4 (173-247)||(52241162-52241236)
chr4 (171-248)||(40792784-40792861)
chr4 (173-281)||(10167460-10167568)
chr4 (173-248)||(7707623-7707698)
chr4 (174-237)||(14524867-14524930)
chr4 (169-248)||(31965866-31965945)
chr4 (174-249)||(33232702-33232777)
chr4 (169-248)||(44503685-44503763)
chr4 (173-248)||(50548229-50548304)
chr4 (169-248)||(53432093-53432172)
chr4 (169-247)||(11968542-11968620)
chr4 (169-211)||(52239908-52239950)
chr4 (174-248)||(53205489-53205563)
[»] chr1 (24 HSPs)
chr1 (171-248)||(14477797-14477874)
chr1 (169-248)||(14470887-14470966)
chr1 (169-248)||(41872607-41872686)
chr1 (169-248)||(15071373-15071452)
chr1 (169-251)||(52628876-52628958)
chr1 (169-265)||(44278338-44278434)
chr1 (169-248)||(15072796-15072875)
chr1 (169-248)||(45585015-45585094)
chr1 (171-248)||(16123320-16123397)
chr1 (169-248)||(24499661-24499740)
chr1 (171-242)||(34351968-34352039)
chr1 (169-287)||(52627546-52627665)
chr1 (174-247)||(16965134-16965207)
chr1 (173-248)||(15234047-15234122)
chr1 (169-248)||(46111494-46111573)
chr1 (169-248)||(46467177-46467256)
chr1 (169-248)||(50444704-50444783)
chr1 (173-247)||(16963869-16963943)
chr1 (174-247)||(51042350-51042422)
chr1 (173-248)||(49802901-49802976)
chr1 (169-248)||(27814323-27814402)
chr1 (169-248)||(35943454-35943532)
chr1 (174-248)||(23091387-23091461)
chr1 (173-249)||(50442659-50442735)
[»] scaffold0118 (1 HSPs)
scaffold0118 (171-245)||(43584-43658)
[»] chr5 (15 HSPs)
chr5 (169-245)||(30859181-30859257)
chr5 (169-248)||(22047763-22047842)
chr5 (169-248)||(39603884-39603963)
chr5 (169-248)||(22049142-22049221)
chr5 (171-245)||(15941306-15941380)
chr5 (171-249)||(30857833-30857911)
chr5 (169-248)||(325191-325270)
chr5 (169-248)||(39605475-39605554)
chr5 (173-260)||(22307543-22307630)
chr5 (169-247)||(27705323-27705401)
chr5 (173-248)||(22308805-22308880)
chr5 (173-248)||(30912168-30912243)
chr5 (173-248)||(33173966-33174041)
chr5 (173-250)||(30910776-30910853)
chr5 (174-287)||(34898919-34899031)
[»] chr6 (21 HSPs)
chr6 (169-248)||(6452517-6452596)
chr6 (174-228)||(27082170-27082224)
chr6 (169-248)||(6452315-6452394)
chr6 (171-250)||(7310309-7310388)
chr6 (169-248)||(232207-232284)
chr6 (172-260)||(27080958-27081046)
chr6 (169-245)||(34024073-34024149)
chr6 (173-248)||(23392249-23392324)
chr6 (174-261)||(15730022-15730110)
chr6 (173-248)||(2687265-2687340)
chr6 (173-248)||(17839145-17839220)
chr6 (173-248)||(23397360-23397435)
chr6 (173-248)||(29380226-29380301)
chr6 (174-248)||(6701416-6701490)
chr6 (174-250)||(12669759-12669835)
chr6 (173-256)||(29722698-29722781)
chr6 (173-248)||(32507032-32507107)
chr6 (171-234)||(34023919-34023982)
chr6 (171-201)||(7311777-7311807)
chr6 (174-248)||(29381736-29381810)
chr6 (214-247)||(5077874-5077907)
[»] scaffold0031 (2 HSPs)
scaffold0031 (169-248)||(124000-124079)
scaffold0031 (169-248)||(125239-125318)
[»] scaffold0077 (2 HSPs)
scaffold0077 (169-248)||(52623-52702)
scaffold0077 (169-248)||(54191-54270)
[»] scaffold0034 (2 HSPs)
scaffold0034 (169-227)||(109772-109830)
scaffold0034 (178-248)||(108553-108623)
[»] scaffold0019 (1 HSPs)
scaffold0019 (173-260)||(61886-61973)


Alignment Details
Target: chr8 (Bit Score: 182; Significance: 2e-98; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 73 - 290
Target Start/End: Complemental strand, 29104546 - 29104329
Alignment:
Q  73 cactgttttcctaaatgtatctttgtacgaataattttatggtaatctctaatcttgagtttaatttctttttaggcttatttgatctattgatcctcaa 172  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  29104546 cactgttttcctaaatgtatctttgcacgaataattttatggtaatctctaatcttgagtttaatttctttttaggcttatttgatcaattggtcctcaa 29104447  T
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaaataattggtttt 272  Q
     |||| ||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||| ||||||||||    
T  29104446 atttttattttgatcccacaattaataaaacgtatgtttaagtccctcattttttcctctgtttgtcaaataaatctcatctgtcaaaacaattggtttt 29104347  T
Q  273 ccgttagtatgagcccac 290  Q
    ||||||||||||||||||    
T  29104346 ccgttagtatgagcccac 29104329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 32798617 - 32798538
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||| |||||||||||||||||||||  ||| ||||||||| |||||  |||||||||||||||||||    
T  32798617 tcaagttttcattttggtcccacaattaataaaacgtaccttttagtccctcaattttttctccgtttgtcaaataaatc 32798538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 169 - 245
Target Start/End: Original strand, 32797169 - 32797245
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataa 245  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||  ||||| |||||||  |||||||    
T  32797169 tcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcaggttttcctccgtttaccaaataa 32797245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 248
Target Start/End: Complemental strand, 26697912 - 26697838
Alignment:
Q  174 ttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||||  ||||| ||||||||||||||| |||| |||||||||||||||||||| |||||| ||||||||    
T  26697912 ttttcattttagtcccataattaataaaacgtacgttttagtccctcactttttcttccttttgtcgaataaatc 26697838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 251
Target Start/End: Original strand, 28418837 - 28418919
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctca 251  Q
    |||| ||||||||||| ||||| ||||||||||||  | |||| |||||||||||||||| |||||||| |||||||||||||    
T  28418837 tcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctccgtttgccaaataaatctca 28418919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 251
Target Start/End: Complemental strand, 28420259 - 28420177
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctca 251  Q
    |||| ||||||||||| ||||| ||||||||||||  | |||| ||||||||| |||||| ||||||||||||||||||||||    
T  28420259 tcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccgtttgtcaaataaatctca 28420177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 248
Target Start/End: Complemental strand, 30787683 - 30787606
Alignment:
Q  171 aagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||| ||||| |||||||||||  ||| |||  |||||||||||||||||||||||| ||||||||||    
T  30787683 aagttttcattttggtcccataattaataaaatatatattttggtccctcactttttcttccgtttgccaaataaatc 30787606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 248
Target Start/End: Complemental strand, 42872272 - 42872195
Alignment:
Q  171 aagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||||||| ||| || ||| ||||||||||| |||| ||||| |||||||||| |||||||||||||||||||    
T  42872272 aagttttcattttaatctcataatgaataaaacgtacgttttagtccttcactttttcctccgtttgtcaaataaatc 42872195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 261
Target Start/End: Original strand, 26696563 - 26696655
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaaa 261  Q
    |||||||||||||||| |||||||||||||||||| ||  |||  ||||||||||||||| ||| |||| ||||||||||   ||||||||||    
T  26696563 tcaagttttcattttggtcccacaattaataaaacatacattttggtccctcactttttcctccatttgccaaataaatcctttctgtcaaaa 26696655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 42870844 - 42870912
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttg 237  Q
    |||||||||||||||| ||||||||||||||||||||| |||| ||||||| |||||||| || |||||    
T  42870844 tcaagttttcattttggtcccacaattaataaaacgtacgttttagtcccttactttttcgtctgtttg 42870912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 22551038 - 22551116
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||| |||||| |||||||||||||||||||||| |||  ||||||||||||||| ||| |||| ||||||||||    
T  22551038 tcaagtttttattttggtcccacaattaataaaacgtatcttttggtccctcactttttc-tccatttgccaaataaatc 22551116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 234
Target Start/End: Complemental strand, 13198023 - 13197961
Alignment:
Q  172 agttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgt 234  Q
    ||||||| ||||| ||||||||||||||||| ||| ||||||||||||||||||||| |||||    
T  13198023 agttttcgttttggtcccacaattaataaaaggtacgtttaagtccctcactttttcctccgt 13197961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 32695360 - 32695286
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaat 243  Q
    |||||||||||||||| || |||||||||||||||||| |||||||||| |||| ||||| || ||||| |||||    
T  32695360 tcaagttttcattttggtctcacaattaataaaacgtacgtttaagtccttcacgttttcctctgtttgccaaat 32695286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 247
Target Start/End: Original strand, 30786709 - 30786785
Alignment:
Q  171 aagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaat 247  Q
    ||||||||||||||||| || |||||||||||||||| |||   |||||||||||||  |||||||| |||||||||    
T  30786709 aagttttcattttgatcacataattaataaaacgtatattttgatccctcacttttttctccgtttgccaaataaat 30786785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 212792 - 212717
Alignment:
Q  174 ttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatct 249  Q
    ||||||||||  |||||||||||| |||||   ||||| |||||||||||||||| | ||||||||||||||||||    
T  212792 ttttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtttgtcaaataaatct 212717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 239462 - 239537
Alignment:
Q  174 ttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatct 249  Q
    ||||||||||  |||||||||||| |||||   ||||| |||||||||||||||| | ||||||||||||||||||    
T  239462 ttttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtttgtcaaataaatct 239537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 726415 - 726340
Alignment:
Q  174 ttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatct 249  Q
    ||||||||||  |||||||||||| |||||   ||||| |||||||||||||||| | ||||||||||||||||||    
T  726415 ttttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtttgtcaaataaatct 726340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 792817 - 792892
Alignment:
Q  174 ttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatct 249  Q
    ||||||||||  |||||||||||| |||||   ||||| |||||||||||||||| | ||||||||||||||||||    
T  792817 ttttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtttgtcaaataaatct 792892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 798916 - 798841
Alignment:
Q  174 ttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatct 249  Q
    ||||||||||  |||||||||||| |||||   ||||| |||||||||||||||| | ||||||||||||||||||    
T  798916 ttttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtttgtcaaataaatct 798841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 260
Target Start/End: Original strand, 8570153 - 8570240
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaa 260  Q
    |||||||||||| ||| ||||||||||||||||| ||||  |||||||||||||   || ||||| |||||||||| | |||||||||    
T  8570153 gttttcattttggtcctacaattaataaaacgtacgttttggtccctcacttttgtctctgtttgccaaataaatcccttctgtcaaa 8570240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 41629739 - 41629818
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||| |||||| || ||||||||||||||||||| |||   |||||||  |||||||||||||| ||||||||||    
T  41629739 tcaagtttttattttggtctcacaattaataaaacgtatattttgatccctcaagttttcttccgtttgccaaataaatc 41629818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 44076448 - 44076369
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||| |||| |||||| |||||||||||||||||||||| |||  || ||||| |||||| |||||||| ||||||||||    
T  44076448 tcaaatttttattttggtcccacaattaataaaacgtatcttttggtgcctcaatttttcctccgtttgccaaataaatc 44076369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 6397819 - 6397893
Alignment:
Q  174 ttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||||| |||||||||||||||||| ||  ||| ||||||||| |||||  |||||||| ||||||||||    
T  6397819 ttttcattttggtcccacaattaataaaacttacattttagtccctcatttttttctccgtttgccaaataaatc 6397893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 29104605 - 29104568
Alignment:
Q  14 agaagtgattgtgatccaaactattcaagcataagttg 51  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29104605 agaagtgattgtgatccaaactattcaagcataagttg 29104568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 260
Target Start/End: Original strand, 211630 - 211717
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaa 260  Q
    |||||||||||| ||||||||||||||||||  | |||| ||||||| | |||||  |||||||  |||||||||| | |||||||||    
T  211630 gttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgtttaccaaataaatcccttctgtcaaa 211717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 260
Target Start/End: Complemental strand, 240626 - 240539
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaa 260  Q
    |||||||||||| ||||||||||||||||||  | |||| ||||||| | |||||  |||||||  |||||||||| | |||||||||    
T  240626 gttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgtttaccaaataaatcccttctgtcaaa 240539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 260
Target Start/End: Original strand, 725253 - 725340
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaa 260  Q
    |||||||||||| ||||||||||||||||||  | |||| ||||||| | |||||  |||||||  |||||||||| | |||||||||    
T  725253 gttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgtttaccaaataaatcccttctgtcaaa 725340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 260
Target Start/End: Complemental strand, 793981 - 793894
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaa 260  Q
    |||||||||||| ||||||||||||||||||  | |||| ||||||| | |||||  |||||||  |||||||||| | |||||||||    
T  793981 gttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgtttaccaaataaatcccttctgtcaaa 793894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 248
Target Start/End: Complemental strand, 6398577 - 6398503
Alignment:
Q  174 ttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||||| || || ||||||||||||    |||| ||||||||| |||||| |||||||||||||||||||    
T  6398577 ttttcattttggtctcataattaataaaacaagcgttttagtccctcattttttcctccgtttgtcaaataaatc 6398503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 29103527 - 29103597
Alignment:
Q  178 cattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||| |||||||||||||||||||||  ||| ||||||||| |||||| |||| |||  |||||||||    
T  29103527 cattttggtcccacaattaataaaacgtacatttgagtccctcattttttcctccgattgctaaataaatc 29103597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 248
Target Start/End: Original strand, 32693863 - 32693940
Alignment:
Q  171 aagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||| |||||||||||||||||| || | ||  |||| |||  ||||| |||||||| ||||||||||    
T  32693863 aagttttcattttggtcccacaattaataaaacatacgctttggtccttcagattttcctccgtttgccaaataaatc 32693940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 4810500 - 4810579
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||| |||| |||||| ||||| ||||||||||||||||||||  |||| |||  ||||  |||||||| ||||||||||    
T  4810500 tcaaatttttattttggtcccataattaataaaacgtatgttttggtccttcaaatttttctccgtttgccaaataaatc 4810579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 13116365 - 13116440
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||| |||||||||||||||||     |||| ||||| |||| ||||| |||||||| ||||||||||    
T  13116365 gttttcattttggtcccacaattaataaaagtggcgttttagtccttcacattttcctccgtttgccaaataaatc 13116440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 17338076 - 17338151
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||| |||||||||||||||||     |||| |||||||||| ||||  |||||||| ||||||||||    
T  17338076 gttttcattttggtcccacaattaataaaaatggcgttttagtccctcacatttttctccgtttgccaaataaatc 17338151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 45437567 - 45437516
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctc 220  Q
    |||||||||||||||||||||| ||||||||||||  ||||||  |||||||    
T  45437567 tcaagttttcattttgatcccataattaataaaactcatgttttggtccctc 45437516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 248
Target Start/End: Complemental strand, 41630204 - 41630130
Alignment:
Q  174 ttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||||  || ||||||||||||||||||  ||||||||||||| |||||  |  |||||| |||||||||    
T  41630204 ttttcattttagtctcacaattaataaaacgtacctttaagtccctcaattttttctatgtttgttaaataaatc 41630130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 45395000 - 45395032
Alignment:
Q  171 aagttttcattttgatcccacaattaataaaac 203  Q
    |||||||||||||||||||| ||||||||||||    
T  45395000 aagttttcattttgatcccataattaataaaac 45395032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 171 - 285
Target Start/End: Original strand, 37735339 - 37735453
Alignment:
Q  171 aagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaaataattggtt 270  Q
    |||||||||||||| ||||| |||||||||||||||||||| ||||||||| |||||  | |||||||||||||||||||||| ||||||| ||||| ||    
T  37735339 aagttttcattttggtcccataattaataaaacgtatgttttagtccctcatttttttcttcgtttgtcaaataaatctcatccgtcaaaacaattgatt 37735438  T
Q  271 ttccgttagtatgag 285  Q
    |||||||||||||||    
T  37735439 ttccgttagtatgag 37735453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 173 - 285
Target Start/End: Complemental strand, 37736162 - 37736051
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaaataattggtttt 272  Q
    |||||||||||| || |||||||||||||||||| |||| |||||||||||||||  |||||||| |||||||| |||||| ||||||| ||||||||||    
T  37736162 gttttcattttggtctcacaattaataaaacgtacgttttagtccctcacttttttctccgtttgccaaataaacctcatc-gtcaaaacaattggtttt 37736064  T
Q  273 ccgttagtatgag 285  Q
    |||||||||||||    
T  37736063 ccgttagtatgag 37736051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 41544693 - 41544789
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaaataat 265  Q
    |||||||||||||||| ||| | |||||||| |||||| ||||||||||||||||||||| || ||||| ||||||||||  ||| |||||||||||    
T  41544693 tcaagttttcattttggtcctataattaatataacgtacgtttaagtccctcactttttcctctgtttgccaaataaatccaatccgtcaaaataat 41544789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 53187590 - 53187668
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||||||  ||||||||||||| ||||||||  |||||||||||||||||||||||| ||||||||||    
T  53187590 tcaagttttcattttgatcttacaattaataaaatgtatgttt-ggtccctcactttttcttccgtttgccaaataaatc 53187668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 250
Target Start/End: Complemental strand, 18458742 - 18458661
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctc 250  Q
    ||||||||| |||||| |||||||||||||||||| |  |||| |||||||||||||||| |||||||| ||||||||||||    
T  18458742 tcaagtttttattttggtcccacaattaataaaacttgcgttttagtccctcactttttcctccgtttgccaaataaatctc 18458661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 34819369 - 34819309
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttct 229  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||    
T  34819369 tcaagttttcattttgatcctacaattaataaaacgtacgtttaagtccttcactttttct 34819309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 38242601 - 38242522
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||||||||||||||||||||||||||||||||  |||  ||||||||||||||  || ||||| ||||||||||    
T  38242601 tcaagttttcattttgatcccacaattaataaaacgtaccttttggtccctcacttttttatctgtttgccaaataaatc 38242522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 251
Target Start/End: Original strand, 50809452 - 50809534
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctca 251  Q
    |||| ||||||||||| ||||| ||||||||||||  | |||| |||||||||||||||| |||||||| |||||||||||||    
T  50809452 tcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctccgtttgccaaataaatctca 50809534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 251
Target Start/End: Complemental strand, 50866410 - 50866328
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctca 251  Q
    |||| ||||||||||| ||||| ||||||||||||  | |||| |||||||||||||||| |||||||| |||||||||||||    
T  50866410 tcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctccgtttgccaaataaatctca 50866328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 12108068 - 12107992
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataa 245  Q
    |||||||||||||||| |||||||| ||||||||| ||| |||  ||||||||||||||| |||||||| |||||||    
T  12108068 tcaagttttcattttggtcccacaactaataaaacatatattttggtccctcactttttcctccgtttgccaaataa 12107992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 18197178 - 18197257
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||| ||||||||||| |||||||||||||||||||||  |||  |||||||| |||||| |||||||| ||||||||||    
T  18197178 tcaaattttcattttggtcccacaattaataaaacgtaccttttggtccctcattttttcctccgtttgccaaataaatc 18197257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 34818117 - 34818196
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||| ||||||||||||||||||||||| ||  ||||||||  ||||| ||| |||| ||||||||||    
T  34818117 tcaagttttcattttggtcccacaattaataaaacgtatgatttggtccctcagattttcctccatttgccaaataaatc 34818196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 38240937 - 38241016
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||| |||| |||||| ||||||||||||||||||||| |||||||||| |||  ||||| |||||||| ||||||||||    
T  38240937 tcaaatttttattttggtcccacaattaataaaacgtacgtttaagtccttcagattttcctccgtttgccaaataaatc 38241016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 40364350 - 40364429
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||| ||| | ||||||||||| ||| |||||||||||||| |||||  |||||||| ||||||||||    
T  40364350 tcaagttttcattttggtcctaaaattaataaaatgtacgtttaagtccctcatttttttctccgtttgccaaataaatc 40364429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 53194955 - 53194876
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||| ||||| ||||||||||||||| ||||  ||||||||||||||| ||  |||| ||||||||||    
T  53194955 tcaagttttcattttggtcccataattaataaaacgtacgttttggtccctcactttttcctctatttgccaaataaatc 53194876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 251
Target Start/End: Complemental strand, 50810919 - 50810837
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctca 251  Q
    |||| ||||||||||| ||||| ||||||||||||  | |||| ||||||||| |||||| |||||||| |||||||||||||    
T  50810919 tcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccgtttgccaaataaatctca 50810837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 251
Target Start/End: Original strand, 50864945 - 50865027
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctca 251  Q
    |||| ||||||||||| ||||| ||||||||||||  | |||| ||||||||| |||||| |||||||| |||||||||||||    
T  50864945 tcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccgtttgccaaataaatctca 50865027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 53420352 - 53420426
Alignment:
Q  174 ttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||||| ||| ||||||||||||||||| ||||  ||||||||||||||  ||||||| |||||||||||    
T  53420352 ttttcattttggtcctacaattaataaaacgtacgttttggtccctcacttttttctccgtttatcaaataaatc 53420426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 260
Target Start/End: Complemental strand, 53421842 - 53421755
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaa 260  Q
    |||||||||||  ||| ||||||||||||||||| ||||  ||||||||||||||  || ||||| |||||||||| | |||||||||    
T  53421842 gttttcattttagtcctacaattaataaaacgtacgttttggtccctcacttttttctctgtttgccaaataaatcccttctgtcaaa 53421755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 53624446 - 53624367
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||||||||||||| ||||||||||||||||||  |||  ||| ||||||||||  || ||||| ||||||||||    
T  53624446 tcaagttttcattttgatctcacaattaataaaacgtacattttggtcactcacttttttctcggtttgccaaataaatc 53624367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 3208520 - 3208594
Alignment:
Q  174 ttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||||| ||||| ||||||||||||||| ||||   ||||| | |||||| |||||||||||||||||||    
T  3208520 ttttcattttggtcccataattaataaaacgtacgttttgatcccttattttttcctccgtttgtcaaataaatc 3208594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 248
Target Start/End: Complemental strand, 23443537 - 23443463
Alignment:
Q  174 ttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||||| ||||| |||||||||||||||  ||||||||| |||  |||||||| ||||| ||||||||||    
T  23443537 ttttcattttggtcccaaaattaataaaacgtacctttaagtccttcatcttttcttctgtttgccaaataaatc 23443463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 265
Target Start/End: Complemental strand, 36176588 - 36176495
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctca-ctttttcttccgtttgtcaaataaatctcatctgtcaaaataat 265  Q
    |||||||||||| ||||||||||||||||| ||||||||  ||||||||  |||||| || ||||| ||||||||||   |||||| |||||||    
T  36176588 gttttcattttggtcccacaattaataaaatgtatgttttggtccctcatttttttcctctgtttgccaaataaatcatttctgtcgaaataat 36176495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 245
Target Start/End: Original strand, 40244218 - 40244294
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataa 245  Q
    |||||||||||||||| || ||||||||||||||||||  |||  ||||||||  ||||| |||||||| |||||||    
T  40244218 tcaagttttcattttggtctcacaattaataaaacgtacattttggtccctcaaattttcctccgtttgccaaataa 40244294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 35370948 - 35371019
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaata 244  Q
    ||||||||||||||||||||||||||||||    ||||| ||||| |||| ||||| || ||||||||||||    
T  35370948 gttttcattttgatcccacaattaataaaaatggtgttttagtccttcaccttttcctctgtttgtcaaata 35371019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 260
Target Start/End: Complemental strand, 42686226 - 42686139
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaa 260  Q
    ||||| |||||||||| ||||||||||||||     ||| |||||||||||||||  || |||||||||||||||||| || ||||||    
T  42686226 gtttttattttgatcctacaattaataaaacaggcattttagtccctcacttttttctctgtttgtcaaataaatctcttcagtcaaa 42686139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 227
Target Start/End: Complemental strand, 55328390 - 55328332
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcacttttt 227  Q
    ||||||||||||||||||| || |||||||||||   |||||| |||||||||||||||    
T  55328390 tcaagttttcattttgatctcataattaataaaattcatgttttagtccctcacttttt 55328332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 18442283 - 18442342
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttc 228  Q
    |||||||||||||||| ||||||||||||||||||  | |||| ||||| ||| ||||||    
T  18442283 tcaagttttcattttggtcccacaattaataaaacccacgttttagtccatcattttttc 18442342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 19487357 - 19487416
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttc 228  Q
    |||||||||||||||| ||||||||||||||||||  | |||| ||||| ||| ||||||    
T  19487357 tcaagttttcattttggtcccacaattaataaaacccacgttttagtccatcattttttc 19487416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 28909687 - 28909609
Alignment:
Q  172 agttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctc 250  Q
    ||||||||||||| ||||| || |||||||||  ||||||  ||||||||| |||   |||||| ||||||||||||||    
T  28909687 agttttcattttggtcccataactaataaaactcatgttttggtccctcacgtttgtctccgttggtcaaataaatctc 28909609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 290
Target Start/End: Complemental strand, 40364902 - 40364829
Alignment:
Q  217 cctcactttttcttccgtttgtcaaataaatctcatctgtcaaaataattggttttccgttagtatgagcccac 290  Q
    |||||||||||  || |||||||||||||||||| || ||||||| ||| |  |||||||||||| ||| ||||    
T  40364902 cctcacttttttctctgtttgtcaaataaatctcttccgtcaaaacaatagcctttccgttagtaagagtccac 40364829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 18845 - 18958
Alignment:
Q  171 aagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaaataattggtt 270  Q
    |||||||||||||| ||||| | |||||||||| ||||||| |||||||||||||||  |||||||| |||||||||| |||| ||||||| ||||||||    
T  18845 aagttttcattttggtcccatatttaataaaacttatgttttagtccctcactttttactccgtttgccaaataaatcccatccgtcaaaacaattggtt 18944  T
Q  271 ttccgttagtatga 284  Q
    ||||||||||||||    
T  18945 ttccgttagtatga 18958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 169 - 273
Target Start/End: Original strand, 32602964 - 32603068
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaaataattgg 268  Q
    ||||||||| |||||| ||||| ||||||||||||||| |||| |||||||||||||||  |||||||| ||||||||||||||| ||||||| ||||||    
T  32602964 tcaagtttttattttggtcccataattaataaaacgtacgttttagtccctcactttttactccgtttgccaaataaatctcatccgtcaaaacaattgg 32603063  T
Q  269 ttttc 273  Q
    |||||    
T  32603064 ttttc 32603068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 169 - 249
Target Start/End: Complemental strand, 4300133 - 4300053
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatct 249  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| || ||||| |||||||||||    
T  4300133 tcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcactttttcctctgtttgccaaataaatct 4300053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 40508409 - 40508488
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| |||||| | ||||||||||    
T  40508409 tcaagttttcatttttgtcccacaattaataaaacgtacgtttaagtccctcactttttcctccgttagccaaataaatc 40508488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 40509819 - 40509740
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||| |||||||  ||||||||||    
T  40509819 tcaagttttcattttggtcccacaattaataaaacgtacgtttaagttcctcactttttcctccgtttaccaaataaatc 40509740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 169 - 250
Target Start/End: Original strand, 43459486 - 43459567
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctc 250  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||||||||||  ||||| |||||||| ||||||||||||    
T  43459486 tcaagttttcattttggtcccacaattaataaaacgtgcgtttaagtccctcatgttttcctccgtttgccaaataaatctc 43459567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 22115249 - 22115170
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||| ||||||   ||||||||||    
T  22115249 tcaagttttcattttggtcccacaattaataaaacgtacgtttaagttcctcactttttcctccgttnaccaaataaatc 22115170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 30333316 - 30333395
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||| |||||||||||||||||||||| |||  |||||||| |||||  |||||||||||||||||||    
T  30333316 tcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcatttttttctccgtttgtcaaataaatc 30333395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 248
Target Start/End: Original strand, 4298746 - 4298823
Alignment:
Q  171 aagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||| |||||||||||||||||||||||| ||  ||||||||||||||||||||| || ||||| ||||||||||    
T  4298746 aagtttttattttgatcccacaattaataaaatgtgggtttaagtccctcactttttcctctgtttgccaaataaatc 4298823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 249
Target Start/End: Original strand, 11344538 - 11344615
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatct 249  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||| |||  ||||| ||||||||||||||||||||    
T  11344538 tcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccttca--ttttc-tccgtttgtcaaataaatct 11344615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 248
Target Start/End: Complemental strand, 43460906 - 43460829
Alignment:
Q  171 aagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||| |||||||||||||||||||||  ||| |||||||||||||||| ||| |||| ||||||||||    
T  43460906 aagttttcattttggtcccacaattaataaaacgtacattttagtccctcactttttcctccatttgccaaataaatc 43460829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 250
Target Start/End: Complemental strand, 47456460 - 47456379
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctc 250  Q
    |||||||||||||||| |||||||||||||||||||||  |||  |||||||| ||||||||| ||||| ||||||||||||    
T  47456460 tcaagttttcattttggtcccacaattaataaaacgtactttttggtccctcattttttcttctgtttgccaaataaatctc 47456379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 6173535 - 6173456
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||||||||||  |||| |||||||||||||||  |||  ||||||||||||||| |||||||| ||||||||||    
T  6173535 tcaagttttcattttgtacccataattaataaaacgtacattttggtccctcactttttcctccgtttgccaaataaatc 6173456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 30310152 - 30310231
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||  |||||||||||||||||||||  ||| ||| ||||| |||||| |||||||| ||||||||||    
T  30310152 tcaagttttcatttttgtcccacaattaataaaacgtacatttgagttcctcattttttcctccgtttgccaaataaatc 30310231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 45454073 - 45454148
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||| || || |||||||||||| || |||| |||||||||||||||| |||||||| ||||||||||    
T  45454073 gttttcattttggtctcataattaataaaacatacgttttagtccctcactttttcctccgtttgccaaataaatc 45454148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 248
Target Start/End: Original strand, 47059141 - 47059218
Alignment:
Q  171 aagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||| ||| ||||||||||||| ||| ||||   |||||||||||||| |||||||| ||||||||||    
T  47059141 aagttttcattttggtcctacaattaataaaatgtacgttttgatccctcactttttcctccgtttgccaaataaatc 47059218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 13564320 - 13564245
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||| ||||||||||||||||||    |||| |||||||||| ||||| |||||||| ||||||||||    
T  13564320 gttttcattttggtcccacaattaataaaactggcgttttagtccctcacattttcctccgtttgccaaataaatc 13564245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 45455457 - 45455378
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||| ||||||||||| |||||||||||||||||||||  |||   |||||||||||||  |||||||| ||||||||||    
T  45455457 tcaaattttcattttggtcccacaattaataaaacgtacattttgatccctcacttttttctccgtttgccaaataaatc 45455378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 227
Target Start/End: Complemental strand, 30311554 - 30311496
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcacttttt 227  Q
    |||| ||||||||||| |||||||||||||||||| || |||||||||||||| |||||    
T  30311554 tcaaattttcattttggtcccacaattaataaaacatacgtttaagtccctcatttttt 30311496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 247
Target Start/End: Complemental strand, 32256480 - 32256402
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaat 247  Q
    |||||||||||||||| ||||| ||||||||||| |||  |||  ||||||||||||||| ||| |||| |||||||||    
T  32256480 tcaagttttcattttggtcccataattaataaaatgtaccttttggtccctcactttttcctccatttgccaaataaat 32256402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 250
Target Start/End: Original strand, 46835706 - 46835787
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctc 250  Q
    |||| ||||| ||||  ||| ||||||||||||| |||| |||||||| |||| |||||| || ||||||||||||||||||    
T  46835706 tcaaattttctttttagtcctacaattaataaaatgtatttttaagtctctcaatttttcctctgtttgtcaaataaatctc 46835787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 248
Target Start/End: Complemental strand, 47060558 - 47060481
Alignment:
Q  171 aagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||| ||| | ||||||||||||||| ||||  |||||||||  ||| ||||||||| ||||||||||    
T  47060558 aagttttcattttggtcctataattaataaaacgtacgttttggtccctcacccttttttccgtttgccaaataaatc 47060481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 32255020 - 32255099
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||| |||| |||||| ||||| |||||||||||||||  |||   |||||||||||||| |||||||| ||||||||||    
T  32255020 tcaaatttttattttggtcccataattaataaaacgtacattttgatccctcactttttcctccgtttgccaaataaatc 32255099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 33096900 - 33096979
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||| |||||||   ||||||||||||||||| ||  |||  ||||||||||||||| |||||||| ||||||||||    
T  33096900 tcaagttctcattttaggcccacaattaataaaacttaccttttggtccctcactttttcctccgtttgccaaataaatc 33096979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 22538929 - 22538852
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctc 250  Q
    |||||| ||||| |||||||||||||||||   | |||| |||||||||  ||||| |||||||| ||||||||||||    
T  22538929 gttttctttttggtcccacaattaataaaaatgacgttttagtccctcatcttttcctccgtttgccaaataaatctc 22538852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 33779169 - 33779105
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccg 233  Q
    ||||||||||||||||  |||||||||||||||||  | |||| |||||||| ||||||| ||||    
T  33779169 tcaagttttcattttggccccacaattaataaaactcacgttttagtccctcgctttttcctccg 33779105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 47454368 - 47454447
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctc-actttttcttccgtttgtcaaataaatc 248  Q
    ||||| |||||||||| |||||||||||||||||||||  |||  ||||||| | |||||||| |||||| ||||||||||    
T  47454368 tcaagctttcattttggtcccacaattaataaaacgtacattttggtccctcaagtttttctt-cgtttgccaaataaatc 47454447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 22336014 - 22336089
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||| |||||||||||||||||     |||| |||||||||| ||||| || ||||| ||||||||||    
T  22336014 gttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctcagtttgccaaataaatc 22336089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 202
Target Start/End: Complemental strand, 22337451 - 22337422
Alignment:
Q  173 gttttcattttgatcccacaattaataaaa 202  Q
    ||||||||||||||||||||||||||||||    
T  22337451 gttttcattttgatcccacaattaataaaa 22337422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 206
Target Start/End: Complemental strand, 30334722 - 30334685
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgta 206  Q
    |||||||||||||||  |||||||||||||||||||||    
T  30334722 tcaagttttcattttagtcccacaattaataaaacgta 30334685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 24844331 - 24844371
Alignment:
Q  208 gtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||| |||||||||| |||||||||||||| ||||||||||    
T  24844331 gttttagtccctcacattttcttccgtttgccaaataaatc 24844371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 175 - 285
Target Start/End: Complemental strand, 36011721 - 36011611
Alignment:
Q  175 tttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaaataattggttttcc 274  Q
    ||||||||| |||||| ||||||||||| ||| |||| ||||||||| |||||  |||||||| ||||||||||||||| ||||||| ||||| ||||||    
T  36011721 tttcattttaatcccataattaataaaatgtacgttttagtccctcattttttaatccgtttgccaaataaatctcatccgtcaaaacaattgattttcc 36011622  T
Q  275 gttagtatgag 285  Q
    |||||||||||    
T  36011621 gttagtatgag 36011611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 169 - 247
Target Start/End: Original strand, 17459284 - 17459362
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaat 247  Q
    |||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||    
T  17459284 tcaagttttcattttggtcacacaattaataaaacgtacgtttaagtccctcactttttcctccgtttgccaaataaat 17459362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 11315964 - 11316043
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||  ||||| |||||||| ||||||||||    
T  11315964 tcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcaggttttcctccgtttgccaaataaatc 11316043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 249
Target Start/End: Complemental strand, 43034556 - 43034476
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatct 249  Q
    ||||||||||||||| ||| ||||||||||||||||||  |||  ||||||||||||||| ||||||||||||||||||||    
T  43034556 tcaagttttcattttaatctcacaattaataaaacgtaccttttggtccctcactttttcctccgtttgtcaaataaatct 43034476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 32470660 - 32470581
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||| |||||| ||||||||||||||||||||| |||||||| |||||  ||||| |||||||||||||||||||    
T  32470660 tcaagtttttattttggtcccacaattaataaaacgtacgtttaagttcctcatgttttcctccgtttgtcaaataaatc 32470581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 43033113 - 43033192
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||| |||||||||||||||||||||  |||  ||||||||||||||| |||||||| ||||||||||    
T  43033113 tcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcactttttcctccgtttgccaaataaatc 43033192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 17460769 - 17460690
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||||||||||||||||||||||||| ||||  ||||||||  ||||| |||||||  ||||||||||    
T  17460769 tcaagttttcattttgatcccacaattaataaaacgtacgttttggtccctcaaattttcctccgtttcccaaataaatc 17460690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 247
Target Start/End: Original strand, 28561401 - 28561477
Alignment:
Q  171 aagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaat 247  Q
    |||||||||||||| || ||||||||||||||||||| |||  ||||||||| ||||| | ||||||||||||||||    
T  28561401 aagttttcattttggtctcacaattaataaaacgtatcttttggtccctcaccttttcctacgtttgtcaaataaat 28561477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 236
Target Start/End: Complemental strand, 7437846 - 7437779
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgttt 236  Q
    |||||||||||||||| |||||||||||||||||||||| |||  |||||||| |||||| |||||||    
T  7437846 tcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcaatttttcctccgttt 7437779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 11317453 - 11317374
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||| ||||||||||| |||||||||||||||||| ||| |||  |||||||| |||||| |||||||| ||||||||||    
T  11317453 tcaaattttcattttggtcccacaattaataaaacatatattttggtccctcaatttttcctccgtttggcaaataaatc 11317374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 28562894 - 28562815
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||| ||||||||||| ||||| |||||||||||| ||  |||  ||||||||||||||| |||||||||||||||||||    
T  28562894 tcaaattttcattttggtcccataattaataaaacataccttttggtccctcactttttcctccgtttgtcaaataaatc 28562815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 260
Target Start/End: Original strand, 34468993 - 34469080
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaa 260  Q
    |||||||||||| || ||||||||||||||   | |||| |||||||||| |||||||| ||||| |||||||||||| || ||||||    
T  34468993 gttttcattttggtcgcacaattaataaaaatgacgttttagtccctcacattttcttctgtttgccaaataaatctcttccgtcaaa 34469080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 32469179 - 32469215
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgt 205  Q
    |||||||||||||||||||||||||||||||||||||    
T  32469179 tcaagttttcattttgatcccacaattaataaaacgt 32469215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 11547690 - 11547769
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||| || || ||||||||||||  |||||| |  |||||| |||||| | |||||||||||||||||    
T  11547690 tcaagttttcattttggtctcataattaataaaacacatgttttaacccctcattttttccttcgtttgtcaaataaatc 11547769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 18617087 - 18617012
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||| |||||||||||||||||     |||| |||||||||| ||||| |||||||| ||||||||||    
T  18617087 gttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatc 18617012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 29219420 - 29219495
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||| |||||||||||||||||     |||| |||||||||| ||||| |||||||| ||||||||||    
T  29219420 gttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatc 29219495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 29332719 - 29332794
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||| |||||||||||||||||     |||| |||||||||| ||||| |||||||| ||||||||||    
T  29332719 gttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatc 29332794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 290
Target Start/End: Original strand, 36010612 - 36010725
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaaataattggtttt 272  Q
    |||||||||||| ||  || ||||||||||||||| ||| |||||||||||||||| | |||||| ||   || || |||| ||||||| ||||| ||||    
T  36010612 gttttcattttggtcttacgattaataaaacgtatattttagtccctcactttttccttcgtttgcca---aactc-catccgtcaaaacaattgatttt 36010707  T
Q  273 ccgttagtatgagcccac 290  Q
    || |||||||||| ||||    
T  36010708 ccattagtatgagtccac 36010725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 6030553 - 6030513
Alignment:
Q  171 aagttttcattttgatcccacaattaataaaacgtatgttt 211  Q
    |||||||||||||||||||||||||||| ||| ||| ||||    
T  6030553 aagttttcattttgatcccacaattaattaaaagtacgttt 6030513  T

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Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 248
Target Start/End: Original strand, 34512848 - 34512924
Alignment:
Q  172 agttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||||||| ||||| ||||||||||||  ||||||   |||||||  ||| | |||||| ||||||||||||    
T  34512848 agttttcattttggtcccataattaataaaactcatgttttgatccctcaaatttgcctccgttagtcaaataaatc 34512924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 8e-27; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 44501549 - 44501646
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaaataatt 266  Q
    ||||||||||||| || ||||| ||||||||||||||| ||||||||||||||||||||  || ||||| ||||||||||||||| ||||||||||||    
T  44501549 tcaagttttcattctggtcccataattaataaaacgtacgtttaagtccctcacttttttctctgtttgccaaataaatctcatccgtcaaaataatt 44501646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 169 - 247
Target Start/End: Original strand, 1829784 - 1829862
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaat 247  Q
    |||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||| | ||||||||||||||||    
T  1829784 tcaagttttcattttggtcccacaattaataaaacgtatcttttagtccctcactttttcctacgtttgtcaaataaat 1829862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 171 - 247
Target Start/End: Original strand, 49342652 - 49342728
Alignment:
Q  171 aagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaat 247  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||| ||||| ||||||||    
T  49342652 aagttttcattttgatcccacaattaataaaatgtacgtttaagtccctcactttttcctccatttgttaaataaat 49342728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 171 - 266
Target Start/End: Complemental strand, 1190275 - 1190180
Alignment:
Q  171 aagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaaataatt 266  Q
    |||||||||||||| ||||| ||||||||||||||| |||||||| |||||||||||  || ||||| |||||||||| |||| ||||||||||||    
T  1190275 aagttttcattttggtcccataattaataaaacgtacgtttaagtacctcacttttttctctgtttgccaaataaatcccatccgtcaaaataatt 1190180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 2312567 - 2312488
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||| ||||||  ||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||    
T  2312567 tcaagtttccattttagtcccacaattaataaaacgtacgtttaagtccctcactttttcctccgtttgccaaataaatc 2312488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 42871126 - 42871205
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||| ||||||||||||||||||||||||||||||||| ||||  ||||||||||||||| |||||||| ||||||||||    
T  42871126 tcaaattttcattttgatcccacaattaataaaacgtacgttttggtccctcactttttcctccgtttgccaaataaatc 42871205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 42810288 - 42810209
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||| ||||||||||| |||||||||||||||||||||  |||||||||||||| ||||| |||||||| ||||||||||    
T  42810288 tcaacttttcattttggtcccacaattaataaaacgtacttttaagtccctcacattttcctccgtttgccaaataaatc 42810209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 390248 - 390327
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||| |||||||||||||||||||||| |||  |||||||| || ||| |||||||| ||||||||||    
T  390248 tcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcatttcttcctccgtttgccaaataaatc 390327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 1188874 - 1188953
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||| |||||| |||||||||||||||||||||  |||  ||||||||||||||| |||||||| ||||||||||    
T  1188874 tcaagtttttattttggtcccacaattaataaaacgtacattttggtccctcactttttcctccgtttgccaaataaatc 1188953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 4871445 - 4871370
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||| | | ||||||||||||||||||||||||||||| ||| ||||  |||||||||||||||||||    
T  4871445 gttttcattttggttctacaattaataaaacgtatgtttaagtcccccacgtttttctccgtttgtcaaataaatc 4871370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 247
Target Start/End: Original strand, 6348186 - 6348264
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaat 247  Q
    |||||||||||||||| |||||||||||||||||||||  |||  || |||||||||||| || |||||||||||||||    
T  6348186 tcaagttttcattttggtcccacaattaataaaacgtaccttttggttcctcactttttcctctgtttgtcaaataaat 6348264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 24426370 - 24426487
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaaataattgg 268  Q
    |||||||||||||||| || ||||||||||||||||||  |||  ||||||||||||||| |||||||| |||| |||| |||||  |||||| |||||     
T  24426370 tcaagttttcattttggtctcacaattaataaaacgtaccttttggtccctcactttttcctccgtttgccaaaaaaatttcatccatcaaaa-aattgc 24426468  T
Q  269 ttttccgttagtatgagcc 287  Q
    ||| | |||||| ||||||    
T  24426469 tttcctgttagtttgagcc 24426487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 250
Target Start/End: Original strand, 52963600 - 52963681
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctc 250  Q
    |||||||||||||||| || ||||||||||||| |||||||||  ||||||||  ||||  |||||||||||||||||||||    
T  52963600 tcaagttttcattttggtctcacaattaataaatcgtatgttttggtccctcaagtttttctccgtttgtcaaataaatctc 52963681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 247
Target Start/End: Complemental strand, 1588172 - 1588096
Alignment:
Q  171 aagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaat 247  Q
    |||||||||||||  ||||||||||||||||| ||| |||||| |||||||||||||| |||||||  |||||||||    
T  1588172 aagttttcattttagtcccacaattaataaaatgtacgtttaaatccctcactttttcctccgtttaccaaataaat 1588096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 393723 - 393644
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||| ||||||||||| ||||||||||||||||| |||| |||  ||||||||||||||  |||||||| ||||||||||    
T  393723 tcaaattttcattttggtcccacaattaataaaaagtatcttttggtccctcacttttttctccgtttgccaaataaatc 393644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 2310954 - 2311033
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||| ||||||||||||||||||||| ||||  ||||||||  ||||| |||| ||| ||||||||||    
T  2310954 tcaagttttcattttggtcccacaattaataaaacgtacgttttggtccctcagattttcctccgattgccaaataaatc 2311033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 236
Target Start/End: Complemental strand, 6349638 - 6349571
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgttt 236  Q
    |||||||||||||||| |||||||||||||||||||||  |||  ||||||||| |||||||||||||    
T  6349638 tcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcaccttttcttccgttt 6349571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 27847709 - 27847788
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||| |||||| ||||||||||||||||| |||| |||  |||||| | ||||||||||||||| ||||||||||    
T  27847709 tcaagtttttattttggtcccacaattaataaaatgtatttttcggtcccttaatttttcttccgtttgccaaataaatc 27847788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 37882865 - 37882944
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||  |||||||||||||||||||||  |||  ||||||||| ||||| |||||||| ||||||||||    
T  37882865 tcaagttttcattttagtcccacaattaataaaacgtaccttttggtccctcaccttttcctccgtttgccaaataaatc 37882944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 49344085 - 49344015
Alignment:
Q  179 attttgatcccacaattaataaaacgtatgtttaagtccc-tcactttttcttccgtttgtcaaataaatc 248  Q
    |||||| ||||||||||||||||||||  ||||||||||| |||||||||| |||||||| ||||||||||    
T  49344085 attttggtcccacaattaataaaacgtgggtttaagtcccttcactttttcctccgtttgccaaataaatc 49344015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 27851017 - 27850952
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgt 234  Q
    |||||||||||||||| |||||||||||||||||||||| |||  |||||||| |||||| |||||    
T  27851017 tcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcaatttttcctccgt 27850952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 1794442 - 1794521
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||||||||||||| ||||||||||||||  ||  |||   |||||||||||||| || ||||||||||||||||    
T  1794442 tcaagttttcattttgatctcacaattaataaaatataccttttgatccctcactttttcctctgtttgtcaaataaatc 1794521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 1831348 - 1831269
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||  |||||||||||||||||||||  |||  |||||||| |||||| ||| ||| |||||||||||    
T  1831348 tcaagttttcattttagtcccacaattaataaaacgtacattttggtccctcattttttcctccatttttcaaataaatc 1831269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 4129024 - 4129103
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||| ||||||||||||||||| |||  |||  |||||| |||||||  |||||||| ||||||||||    
T  4129024 tcaagttttcattttggtcccacaattaataaaatgtacattttggtcccttacttttttctccgtttgccaaataaatc 4129103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 245
Target Start/End: Complemental strand, 42872379 - 42872308
Alignment:
Q  174 ttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataa 245  Q
    ||||||||||| ||||| ||||||||||| ||| ||||  ||||||||||||||| |||||||| |||||||    
T  42872379 ttttcattttggtcccataattaataaaatgtacgttttggtccctcactttttcctccgtttgccaaataa 42872308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 54865140 - 54865214
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||| ||||| |||||||||||  | ||||| |||||||||| ||||| |||||||||||||||||||    
T  54865140 gttttcattttggtcccataattaataaaat-tgtgttttagtccctcacattttcctccgtttgtcaaataaatc 54865214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 1587218 - 1587292
Alignment:
Q  174 ttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||||  || ||||||||||||||||||  |||  ||||||||||||||| |||||||| ||||||||||    
T  1587218 ttttcattttagtctcacaattaataaaacgtaccttttggtccctcactttttcctccgtttgccaaataaatc 1587292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 248
Target Start/End: Complemental strand, 31968472 - 31968398
Alignment:
Q  174 ttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||||| ||| ||||||||||||||||| ||||  |||| |||||||||| || ||||| ||||||||||    
T  31968472 ttttcattttggtcctacaattaataaaacgtacgttttggtccttcactttttcctctgtttgccaaataaatc 31968398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 15450156 - 15450080
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatct 249  Q
    ||||||||| |||||||  | ||||||||||||| ||||||||| || || ||||| |||||||| |||||||||||    
T  15450156 gttttcattatgatcccttagttaataaaacgtacgtttaagtcgcttaccttttcctccgtttgccaaataaatct 15450080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 10168864 - 10168789
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||| |||||||||||||||||     |||| |||||||||| ||||| |||||||| ||||||||||    
T  10168864 gttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctccgtttgccaaataaatc 10168789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 260
Target Start/End: Original strand, 53204396 - 53204483
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaa 260  Q
    ||||||||||||||| |||||||||||||||    |||| ||| ||||| |||||  |||||||| |||||||||| | |||||||||    
T  53204396 gttttcattttgatctcacaattaataaaacaggcgttttagttcctcaattttttctccgtttgccaaataaatcccttctgtcaaa 53204483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 54485630 - 54485551
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||||||||| |||||||||||| |  ||||   |||||||  ||||| |||||||| ||||||||||    
T  54485630 tcaagttttcattttgatcccataattaataaaacattcgttttgatccctcaagttttcatccgtttgccaaataaatc 54485551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 52241236 - 52241162
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaat 247  Q
    |||||||||||||| ||||||||||||||||||| ||||   | |||||  ||||| |||||||| |||||||||    
T  52241236 gttttcattttgattccacaattaataaaacgtacgttttgattcctcatcttttcctccgtttgccaaataaat 52241162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 248
Target Start/End: Original strand, 40792784 - 40792861
Alignment:
Q  171 aagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||| |||||||||||||||||| ||  |||  ||||||||  ||||  |||||||| ||||||||||    
T  40792784 aagttttcattttggtcccacaattaataaaacatacattttggtccctcagatttttctccgtttgccaaataaatc 40792861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 281
Target Start/End: Original strand, 10167460 - 10167568
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaaataattggtttt 272  Q
    |||||||||||| | |||||||||||||||  |   ||| |||||||||  ||||| ||||||||||||||||||| | || ||||||  |||   ||||    
T  10167460 gttttcattttggtaccacaattaataaaaattgcattttagtccctcatattttcctccgtttgtcaaataaatcccttccgtcaaataaatctctttt 10167559  T
Q  273 ccgttagta 281  Q
    |||||||||    
T  10167560 ccgttagta 10167568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 7707623 - 7707698
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||| |||||||||||||||||   | |||| ||||| |||| ||||| || ||||| ||||||||||    
T  7707623 gttttcattttggtcccacaattaataaaaatgacgttttagtccatcacattttcctctgtttgccaaataaatc 7707698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 14524930 - 14524867
Alignment:
Q  174 ttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttg 237  Q
    ||||||||||||||||| ||||||||||||  |||||| |||| || |||||| | ||||||||    
T  14524930 ttttcattttgatcccataattaataaaactcatgttttagtctcttacttttccctccgtttg 14524867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 31965866 - 31965945
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||| ||| || ||| |||||||| |||| |||  |||  ||||||||||||||| |||||||| ||||||||||    
T  31965866 tcaagtttttattctggtcctacaattaagaaaatgtacattttggtccctcactttttcctccgtttgccaaataaatc 31965945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 33232777 - 33232702
Alignment:
Q  174 ttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatct 249  Q
    |||| |||||| |||||||||||||||||     |||| |||||||||| ||||| |||||||| |||||||||||    
T  33232777 tttttattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctccgtttgccaaataaatct 33232702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 44503763 - 44503685
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||| |||||| || ||||||||||||| ||||  |||  ||||||||||||||| || ||||| ||||||||||    
T  44503763 tcaagtttttattttggtctcacaattaataaa-cgtacattttggtccctcactttttcctctgtttgccaaataaatc 44503685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 50548304 - 50548229
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||| ||||||||||||||| |   | |||| |||||||||| ||||| || ||||| ||||||||||    
T  50548304 gttttcattttggtcccacaattaataagaataacgttttagtccctcacattttcctctgtttgccaaataaatc 50548229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 53432093 - 53432172
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||| ||||| || ||||||||| |||||||  ||||||||  ||| | | |||| ||||||||||||    
T  53432093 tcaagttttcattttggtcccataagtaataaaacttatgttttggtccctcaagtttgccttcgttggtcaaataaatc 53432172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 247
Target Start/End: Original strand, 11968542 - 11968620
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaat 247  Q
    |||||||||||||||| || ||||||||||||||| ||  |||  ||||||||  ||||  ||||||||| ||||||||    
T  11968542 tcaagttttcattttggtctcacaattaataaaacatactttttggtccctcagattttgctccgtttgtaaaataaat 11968620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 52239908 - 52239950
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgttt 211  Q
    |||| |||| |||||||||||||||||||||||||||| ||||    
T  52239908 tcaaatttttattttgatcccacaattaataaaacgtacgttt 52239950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 248
Target Start/End: Complemental strand, 53205563 - 53205489
Alignment:
Q  174 ttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||||  |||||||||||| ||||     |||| |||||||||||||||| |||||||| ||||||||||    
T  53205563 ttttcattttcgtcccacaattaaaaaaataggcgttttagtccctcactttttcctccgtttgccaaataaatc 53205489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 171 - 248
Target Start/End: Complemental strand, 14477874 - 14477797
Alignment:
Q  171 aagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||  |||||||| ||||||||||    
T  14477874 aagttttcactttgatcccacaattaataaaacgtacgtttaagtccctcacttttttctccgtttgccaaataaatc 14477797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 14470887 - 14470966
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||| | |||||| ||||||||||    
T  14470887 tcaagttttcattttggtcccacaattaataaaacgtacggttaagtccctcactttttccttcgtttgccaaataaatc 14470966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 41872607 - 41872686
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||| ||||||||||||||  ||||||||||||||||| ||||||||| ||||||||||| |||||||| ||||||||||    
T  41872607 tcaacttttcattttgatcatacaattaataaaacgtacgtttaagtctctcactttttcctccgtttgccaaataaatc 41872686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 15071373 - 15071452
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||| || || ||||||||||||||||||||  ||||||||||||||| |||||||  ||||||||||    
T  15071373 tcaagttttcattttggtcacataattaataaaacgtatgttttggtccctcactttttcctccgtttaccaaataaatc 15071452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 251
Target Start/End: Complemental strand, 52628958 - 52628876
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctca 251  Q
    ||||||||| |||||| |||||||||||||||||||||  |||  |||||||| |||||| |||||||| |||||||||||||    
T  52628958 tcaagttttaattttggtcccacaattaataaaacgtaccttttggtccctcattttttcctccgtttgccaaataaatctca 52628876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 265
Target Start/End: Complemental strand, 44278434 - 44278338
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaaataat 265  Q
    |||||||||||||||| |||||| |||||||||||||| ||||  |||||||| |||||  |||||||| |||||| |||   ||||||||||||||    
T  44278434 tcaagttttcattttggtcccacgattaataaaacgtacgttttggtccctcatttttttctccgtttgccaaatagatcctttctgtcaaaataat 44278338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 15072875 - 15072796
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||| |||||||||||||||||||||  |||  |||||| | |||||| |||||||| ||||||||||    
T  15072875 tcaagttttcattttggtcccacaattaataaaacgtacattttggtcccttattttttcctccgtttgccaaataaatc 15072796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 45585094 - 45585015
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||| || ||||||||||||||||||  |||  |||| |||||||||| |||||||| ||||||||||    
T  45585094 tcaagttttcattttggtctcacaattaataaaacgtaccttttggtccttcactttttcctccgtttgccaaataaatc 45585015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 248
Target Start/End: Original strand, 16123320 - 16123397
Alignment:
Q  171 aagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||| | |||||||||||||||   | |||| ||||||||| ||||||||||||||| ||||||||||    
T  16123320 aagttttcattttggttccacaattaataaaattcacgttttagtccctcattttttcttccgtttgccaaataaatc 16123397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 24499740 - 24499661
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||| || |||||||||||||||  | ||||  ||||||||||||||| |||||||  ||||||||||    
T  24499740 tcaagttttcattttggtctcacaattaataaaactcacgttttggtccctcactttttcctccgtttaccaaataaatc 24499661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 34352039 - 34351968
Alignment:
Q  171 aagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaa 242  Q
    |||||||||||||| ||||||||||||||||| |||  |||  ||||||||||||||| | |||||||||||    
T  34352039 aagttttcattttggtcccacaattaataaaatgtaccttttggtccctcactttttcctacgtttgtcaaa 34351968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 52627546 - 52627665
Alignment:
Q  169 tcaagttttcattttgatcccacaattaat-aaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaaataattg 267  Q
    |||||||||||||||| ||||||||||||| ||||| ||  |||  | || | | |||||| |||||||| |||| |||| ||||| ||||||| |||||    
T  52627546 tcaagttttcattttggtcccacaattaataaaaacatacattttggacctttaatttttcctccgtttgccaaaaaaatatcatccgtcaaaaaaattg 52627645  T
Q  268 gttttccgttagtatgagcc 287  Q
    ||||| ||||||| ||||||    
T  52627646 gtttttcgttagtttgagcc 52627665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 16965207 - 16965134
Alignment:
Q  174 ttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaat 247  Q
    ||||||||||| |||||||||||||||||   | |||| ||||||| || ||||||||||||| ||||||||||    
T  16965207 ttttcattttggtcccacaattaataaaaatgacgttttagtcccttacattttcttccgtttatcaaataaat 16965134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 15234122 - 15234047
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||| |||||||||||||||||     |||| |||||||||| ||||| |||||||| ||||||||||    
T  15234122 gttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctccgtttgccaaataaatc 15234047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 46111573 - 46111494
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||| |||||| |||||||||||||||||||||  |||  || ||||| |||||| | |||||| ||||||||||    
T  46111573 tcaagtttttattttggtcccacaattaataaaacgtaccttttggttcctcattttttccttcgtttgccaaataaatc 46111494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 46467177 - 46467256
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||| ||||| || |||||||||  ||||||  ||||||||  ||| | |||||||||||||||||||    
T  46467177 tcaagttttcattttggtcccataactaataaaactcatgtttcggtccctcaggtttgcctccgtttgtcaaataaatc 46467256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 50444783 - 50444704
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||| ||||||||||  |||||||||||||||||||||  |||  |||||||| |||||| |||| ||| ||||||||||    
T  50444783 tcaaattttcattttagtcccacaattaataaaacgtacattttggtccctcattttttcctccgattgccaaataaatc 50444704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 16963869 - 16963943
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaat 247  Q
    |||||||||||| |||||||||||||||||    ||||| |||||||||  ||||| |||||||| |||||||||    
T  16963869 gttttcattttggtcccacaattaataaaaatggtgttttagtccctcatcttttcctccgtttgccaaataaat 16963943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 51042422 - 51042350
Alignment:
Q  174 ttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaat 247  Q
    ||||||||||| ||||||||||||||||||  | |||| ||||||||  |||||| |||||||| |||||||||    
T  51042422 ttttcattttggtcccacaattaataaaactcacgttttagtccctctttttttc-tccgtttgccaaataaat 51042350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 49802976 - 49802901
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctca-ctttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||| |||||||||||||||||   | |||| ||||||||| ||||||| |||||||| ||||||||||    
T  49802976 gttttcattttggtcccacaattaataaaaatgacgttttagtccctcatctttttc-tccgtttgccaaataaatc 49802901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 27814323 - 27814402
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||  ||| | |||||||||||||||  |||  |||||||| |||||| || ||||| ||||||||||    
T  27814323 tcaagttttcattttagtcctataattaataaaacgtaccttttggtccctcattttttcctctgtttgccaaataaatc 27814402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 35943532 - 35943454
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||| |||| |||||| |||||||||||||||||||||  |||  || |||||||||||| | |||||| ||||||||||    
T  35943532 tcaaatttttattttggtcccacaattaataaaacgtacattttggt-cctcactttttccttcgtttgccaaataaatc 35943454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 23091387 - 23091461
Alignment:
Q  174 ttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||||| |   ||||||||||||||||| ||||  ||| ||||||||||  |||||||| ||||||||||    
T  23091387 ttttcattttggttttacaattaataaaacgtacgttttggtcactcacttttttctccgtttgccaaataaatc 23091461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 50442659 - 50442735
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatct 249  Q
    ||||| |||||| || ||||||||||||||||||  |||   | |||||| ||||| || |||||||||||||||||    
T  50442659 gtttttattttggtctcacaattaataaaacgtacattttgattcctcaccttttcctctgtttgtcaaataaatct 50442735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 43658 - 43584
Alignment:
Q  171 aagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataa 245  Q
    ||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  43658 aagtttttattttggtcccataattaataaaacgtatgtttaagtccctcactttttcctccgtttgccaaataa 43584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 30859257 - 30859181
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataa 245  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||| || ||||| |||||||    
T  30859257 tcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcacattttcctctgtttgccaaataa 30859181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 22047763 - 22047842
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||| ||||||||||||||||||||| ||||  |||||||| |||||| |||||||| ||||||||||    
T  22047763 tcaagttttcattttggtcccacaattaataaaacgtacgttttggtccctcattttttcctccgtttgccaaataaatc 22047842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 39603884 - 39603963
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||||||||||||||||||||||||| ||||  ||||||||  ||||| |||||||| ||||||||||    
T  39603884 tcaagttttcattttgatcccacaattaataaaacgtacgttttggtccctcaaattttcctccgtttgccaaataaatc 39603963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 22049221 - 22049142
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||| ||||| ||||||||||||||| ||||  ||||||||||||||| || ||||| ||||||||||    
T  22049221 tcaagttttcattttggtcccataattaataaaacgtacgttttggtccctcactttttcctctgtttggcaaataaatc 22049142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 15941306 - 15941380
Alignment:
Q  171 aagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataa 245  Q
    |||||||||||||||| ||| |||||||||||||||   ||  ||||||||||||||||||||||||||||||||    
T  15941306 aagttttcattttgattccataattaataaaacgtaccatttggtccctcactttttcttccgtttgtcaaataa 15941380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 249
Target Start/End: Original strand, 30857833 - 30857911
Alignment:
Q  171 aagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatct 249  Q
    |||||||||||||| ||||||||||||||||||||||||||  |||| |||  ||||| ||| ||||||||||||||||    
T  30857833 aagttttcattttggtcccacaattaataaaacgtatgttttggtccttcagattttcctccttttgtcaaataaatct 30857911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 325270 - 325191
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||| |||||||||||||||||||||  |||  ||||||||  ||||| |||||||| ||||||||||    
T  325270 tcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcaagttttcctccgtttgccaaataaatc 325191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 39605554 - 39605475
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||| |||||||||||||||||| || ||||  ||||||||  ||||| |||||||| ||||||||||    
T  39605554 tcaagttttcattttggtcccacaattaataaaacatacgttttggtccctcagattttcctccgtttgccaaataaatc 39605475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 260
Target Start/End: Original strand, 22307543 - 22307630
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaa 260  Q
    |||||||||||| | ||| ||||||||||||   ||||| |||||||||||||||  || ||||| |||||||||| | |||||||||    
T  22307543 gttttcattttggttccataattaataaaacaggtgttttagtccctcactttttgctctgtttgccaaataaatcccttctgtcaaa 22307630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 247
Target Start/End: Complemental strand, 27705401 - 27705323
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaat 247  Q
    |||||||||||||||| ||  ||||||||||||||||| ||||  ||||||||  ||||| ||| |||| |||||||||    
T  27705401 tcaagttttcattttggtcatacaattaataaaacgtacgttttggtccctcagattttcctccttttgccaaataaat 27705323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 22308880 - 22308805
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||| ||||| ||||||||||||    |||| |||||||||| ||||  |||||||| ||||||||||    
T  22308880 gttttcattttggtcccataattaataaaacaggcgttttagtccctcacattttgctccgtttgccaaataaatc 22308805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 30912243 - 30912168
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||| |||||||||||||||||     |||| |||||||||| ||||  |||||||| ||||||||||    
T  30912243 gttttcattttggtcccacaattaataaaagtggcgttttagtccctcacctttttctccgtttgccaaataaatc 30912168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 33174041 - 33173966
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||||||| |||||||||     |||| |||||||||| ||||| || ||||| ||||||||||    
T  33174041 gttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctctgtttgccaaataaatc 33173966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 30910776 - 30910853
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctc 250  Q
    |||||||||||| |||||||||||||||||     |||| |||||||||| ||||| || ||||  ||||||||||||    
T  30910776 gttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctctgtttaccaaataaatctc 30910853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 287
Target Start/End: Complemental strand, 34899031 - 34898919
Alignment:
Q  174 ttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaaataattggttttc 273  Q
    ||||||||||| ||||| || |||||||| |||  |||  |||||| | ||||   |||||||| |||| |||||||||| ||||||| ||||| ||| |    
T  34899031 ttttcattttggtcccataagtaataaaaagtacattttggtcccttagttttgtctccgtttgccaaa-aaatctcatccgtcaaaaaaattgatttcc 34898933  T
Q  274 cgttagtatgagcc 287  Q
    ||||||| ||||||    
T  34898932 cgttagtttgagcc 34898919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 8e-21; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 6452596 - 6452517
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||| ||||| ||||||||||||||| |||| ||||||||| |||||| |||||||| ||||||||||    
T  6452596 tcaagttttcattttggtcccataattaataaaacgtacgtttgagtccctcattttttcctccgtttgccaaataaatc 6452517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 27082224 - 27082170
Alignment:
Q  174 ttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttc 228  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  27082224 ttttcattttggtcccacaattaataaaaagtatgtttaagtccctcactttttc 27082170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 6452315 - 6452394
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||| ||||| ||| | ||||||||||| ||| |||| |||||||||||||||| |||||||| ||||||||||    
T  6452315 tcaagttttcgttttggtcctataattaataaaaggtacgttttagtccctcactttttcctccgtttgccaaataaatc 6452394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 171 - 250
Target Start/End: Original strand, 7310309 - 7310388
Alignment:
Q  171 aagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctc 250  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||| |||  ||||  |||||||  ||||||||||||    
T  7310309 aagttttcattttggtcccataattaataaaacgtatgtttaagtccttcaggtttttctccgtttaccaaataaatctc 7310388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 232207 - 232284
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||| ||||||||||| ||||| ||||||||||||  | |||| |||||||||||||||| |||||||| ||||||||||    
T  232207 tcaatttttcattttggtcccataattaataaaac--acgttttagtccctcactttttcctccgtttgccaaataaatc 232284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 260
Target Start/End: Original strand, 27080958 - 27081046
Alignment:
Q  172 agttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaa 260  Q
    ||||||||||||| ||  |||||||||||||  ||  |||||||||||||||||||  ||||||||  |||||||||||||| ||||||    
T  27080958 agttttcattttggtcttacaattaataaaatttacatttaagtccctcacttttttctccgtttgcgaaataaatctcatccgtcaaa 27081046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 34024149 - 34024073
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataa 245  Q
    |||| ||||||||||| ||||||||||||||||| |||  |||   |||||||||||||| ||||||||||||||||    
T  34024149 tcaaattttcattttggtcccacaattaataaaatgtacattttgatccctcactttttcctccgtttgtcaaataa 34024073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 23392249 - 23392324
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||| |||||||||||||||||     ||||||||||||||| ||||| |||||||| ||||||||||    
T  23392249 gttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatc 23392324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 261
Target Start/End: Complemental strand, 15730110 - 15730022
Alignment:
Q  174 ttttcattttgatcccacaattaataaaacg-tatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaaa 261  Q
    ||||||||||| |||||||||||||||||   ||  |||  ||||||||||||||||||||||||  |||||||| ||||| |||||||    
T  15730110 ttttcattttggtcccacaattaataaaaaaatacattttggtccctcactttttcttccgtttgctaaataaatgtcatccgtcaaaa 15730022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 2687265 - 2687340
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||||||||||||||||||||||||     |||| ||||| |||| ||||| |||||||| ||||||||||    
T  2687265 gttttcattttgatcccacaattaataaaaatggcgttttagtccttcacattttcctccgtttgccaaataaatc 2687340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 17839220 - 17839145
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||| |||||||||||||||||     |||| |||||||||| ||||| |||||||| ||||||||||    
T  17839220 gttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatc 17839145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 23397435 - 23397360
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||| |||||||||||||||||     |||| |||||||||| ||||| |||||||| ||||||||||    
T  23397435 gttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatc 23397360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 29380226 - 29380301
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||| |||||||||||| ||||     |||| |||||||||| |||||||||||||| ||||||||||    
T  29380226 gttttcattttggtcccacaattaacaaaaatggcgttttagtccctcaccttttcttccgtttgccaaataaatc 29380301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 6701416 - 6701490
Alignment:
Q  174 ttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||||| |||||||||||||||||    | ||| |||||||||| ||||| |||||||| ||||||||||    
T  6701416 ttttcattttggtcccacaattaataaaaatggtattttagtccctcacattttcctccgtttgccaaataaatc 6701490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 12669759 - 12669835
Alignment:
Q  174 ttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctc 250  Q
    |||| |||||| || |||||||||||||||  | |||| ||||| |||||||||| ||||||||  |||||||||||    
T  12669759 tttttattttggtctcacaattaataaaactcaagttttagtccgtcactttttcctccgtttgctaaataaatctc 12669835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 29722698 - 29722781
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgt 256  Q
    |||||||||||||||||| |||||||||||     |||| |||||||||| ||||| ||| |||  ||||||||||||| ||||    
T  29722698 gttttcattttgatcccataattaataaaaatggcgttttagtccctcacattttcctccattttgcaaataaatctcaactgt 29722781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 32507107 - 32507032
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||||||| |||||||||    ||||| |||||||||| ||||  || ||||| ||||||||||    
T  32507107 gttttcattttgatcccacatttaataaaaatggtgttttagtccctcacatttttctcagtttgccaaataaatc 32507032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 34023919 - 34023982
Alignment:
Q  171 aagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgt 234  Q
    |||||||||||||| | |||||||||||||||||||  |||  ||||||||| ||||| |||||    
T  34023919 aagttttcattttggtaccacaattaataaaacgtaccttttggtccctcaccttttcctccgt 34023982  T

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Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 201
Target Start/End: Complemental strand, 7311807 - 7311777
Alignment:
Q  171 aagttttcattttgatcccacaattaataaa 201  Q
    |||||||||||||||||||||||||||||||    
T  7311807 aagttttcattttgatcccacaattaataaa 7311777  T

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Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 248
Target Start/End: Complemental strand, 29381810 - 29381736
Alignment:
Q  174 ttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||||||||||||||||   | |||| ||||| |||  ||||| |||||||  ||||||||||    
T  29381810 ttttcattttgatcccacaattaataaaaatgacgttttagtccttcatcttttcctccgtttaccaaataaatc 29381736  T

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Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 247
Target Start/End: Complemental strand, 5077907 - 5077874
Alignment:
Q  214 gtccctcactttttcttccgtttgtcaaataaat 247  Q
    ||||||||| ||||||||||||||||||||||||    
T  5077907 gtccctcacgttttcttccgtttgtcaaataaat 5077874  T

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Target: scaffold0031 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 124000 - 124079
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||| |||||||||||||||||||||  |||  ||||||||||||||| || ||||| ||||||||||    
T  124000 tcaagttttcattttggtcccacaattaataaaacgtacattttggtccctcactttttcctctgtttgccaaataaatc 124079  T

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Target: scaffold0031; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 125318 - 125239
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||| ||||||||||| |||||||||||||||||||||  |||  ||||||||||||||| |||||||| ||||||||||    
T  125318 tcaaattttcattttggtcccacaattaataaaacgtaccttttggtccctcactttttcctccgtttgccaaataaatc 125239  T

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Target: scaffold0077 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 52623 - 52702
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    |||||||||||||||||||||||||||||||||| ||| ||||  ||||||||  ||||  |||||||| ||||||||||    
T  52623 tcaagttttcattttgatcccacaattaataaaatgtacgttttggtccctcagatttttctccgtttgccaaataaatc 52702  T

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Target: scaffold0077; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 54270 - 54191
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||| |||||| || |||||||||||||||||  ||||  ||||||||  ||||| |||||||| ||||||||||    
T  54270 tcaagttttaattttggtcgcacaattaataaaacgtgcgttttggtccctcaaattttcctccgtttgccaaataaatc 54191  T

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Target: scaffold0034 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 227
Target Start/End: Complemental strand, 109830 - 109772
Alignment:
Q  169 tcaagttttcattttgatcccacaattaataaaacgtatgtttaagtccctcacttttt 227  Q
    |||||||||||||||| ||| |||||||||||||||||  ||| |||||||||||||||    
T  109830 tcaagttttcattttggtcctacaattaataaaacgtacattttagtccctcacttttt 109772  T

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Target: scaffold0034; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 108553 - 108623
Alignment:
Q  178 cattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatc 248  Q
    ||||||||||||| ||||||||||||||| ||||   ||||||| |||||| ||| |||| ||||||||||    
T  108553 cattttgatcccataattaataaaacgtacgttttgatccctcattttttcctccatttgccaaataaatc 108623  T

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Target: scaffold0019 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 260
Target Start/End: Original strand, 61886 - 61973
Alignment:
Q  173 gttttcattttgatcccacaattaataaaacgtatgtttaagtccctcactttttcttccgtttgtcaaataaatctcatctgtcaaa 260  Q
    |||||||||||| || || |||||||||||     |||| |||||||||  |||||||||||||| |||||||||||  |||||||||    
T  61886 gttttcattttggtctcataattaataaaaatggcgttttagtccctcatcttttcttccgtttgccaaataaatcttttctgtcaaa 61973  T

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