View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10201A_low_115 (Length: 289)
Name: NF10201A_low_115
Description: NF10201A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10201A_low_115 |
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Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 6 - 273
Target Start/End: Original strand, 8240142 - 8240408
Alignment:
| Q |
6 |
atatatacatagcattagtaaacggtttcaaaagcatatatattctttcattctttaataactaacatcgcagagaaaccatgtgttgtttgtgttgttt |
105 |
Q |
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| T |
8240142 |
atatatacatagcattagtaaacggttccaaaagcatatatattattttattctttaataactaacatcgcagagaaaccatgtgttgtttgtgttgttt |
8240241 |
T |
|
| Q |
106 |
aaatagtgtattaggtctaaccgattcaattggatgcttccctcaaccattattggctcttgattgttggatttgaattgttcctttttagtaatccata |
205 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |
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| T |
8240242 |
aaatagtgtattaggtcaaaccgattcaattggatgcttccctcaaccattattggcccttgattgttggatttgaattgttcctttttagtaatcgata |
8240341 |
T |
|
| Q |
206 |
gatatacaaagtctatttaaattgagtatccttcatgcacaaccggtagaggtaaattctgaaagtga |
273 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |
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| T |
8240342 |
gatatacaaagtctatttaaattgagtatccttcatgtacaacc-gtagaggtaaattctgaaagtga |
8240408 |
T |
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