View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10201A_low_127 (Length: 280)
Name: NF10201A_low_127
Description: NF10201A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10201A_low_127 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 5 - 280
Target Start/End: Original strand, 28550887 - 28551162
Alignment:
| Q |
5 |
cacatgcaccgtcccaacaaaaaggaaagtgaagtattattgatgtttaaaaatcacaaggttcatgccatattaaacacatttcaataaaactgaatta |
104 |
Q |
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| T |
28550887 |
cacatgcaccgtcccaacaaaaaggaaagtgaagtattattgatgtttaaaaatcacaaggttcatgccatattaaacacatttcaataaaactgaatta |
28550986 |
T |
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| Q |
105 |
atgtgctagagactctatctcatcttcacgccaattgcgaatttcctctaagatcccagatggttgtcttgttggatcgttcgtagactcattcttgcac |
204 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28550987 |
atgtgctagagaatctatctcatcttcacgccaattgcgaatttcctctaagatcccagatggttgtcttgttggatcgttcgtagactcattcttgcac |
28551086 |
T |
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| Q |
205 |
ataagacatgatctcttttcacaggtgataatcttacacgagatattcatacggttcaatagattacgatgactcg |
280 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28551087 |
ataagacatgatctcttttcacaggtgataatcttacacgagatattcatacggttcaatagattacgatgactcg |
28551162 |
T |
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