View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10201A_low_162 (Length: 259)
Name: NF10201A_low_162
Description: NF10201A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10201A_low_162 |
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Alignment Details
Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 6 - 247
Target Start/End: Original strand, 41062279 - 41062520
Alignment:
| Q |
6 |
aaggaggcgaagggaacgaaggagatggaattggaggtgatgcttcacaagaagtgtttgtgttgttgtattggggtggaggtataggaacaccatggtt |
105 |
Q |
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| T |
41062279 |
aaggaggcgaagggaacgaaggagatggaattggaggtgatgcttcacaagaagtgtttgtgttgttgtattggggtggaggtataggaacaccatggtt |
41062378 |
T |
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| Q |
106 |
atagttattctctaatgtacatgtttgtgacaggaccccatctataccatgacatcgaattgaagatccagacacacatatgtttgggctaataatcttt |
205 |
Q |
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| T |
41062379 |
atggttattctctaatgtacatgtttgtgacaagaccccatctataccatgacatcgaattgaagatccagacacacatatgtttgggctaataatcttt |
41062478 |
T |
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| Q |
206 |
acattgttgacaacaaaattcttcctaccattgttagatatt |
247 |
Q |
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| T |
41062479 |
acattgttgacaacaaaattcttcctaccattgttagatatt |
41062520 |
T |
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