View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10201A_low_286 (Length: 229)

Name: NF10201A_low_286
Description: NF10201A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10201A_low_286
NF10201A_low_286
[»] chr2 (51 HSPs)
chr2 (1-224)||(35449365-35449589)
chr2 (32-101)||(21782832-21782901)
chr2 (24-97)||(37411250-37411323)
chr2 (29-101)||(21616738-21616810)
chr2 (33-121)||(30404865-30404953)
chr2 (23-101)||(18276497-18276575)
chr2 (23-90)||(23718013-23718080)
chr2 (23-90)||(24105685-24105752)
chr2 (31-101)||(29663985-29664056)
chr2 (31-104)||(18420447-18420520)
chr2 (32-121)||(36409641-36409730)
chr2 (33-104)||(21624239-21624311)
chr2 (31-99)||(36756357-36756425)
chr2 (23-90)||(896198-896265)
chr2 (33-120)||(18841028-18841115)
chr2 (29-80)||(28677906-28677957)
chr2 (31-85)||(19573970-19574024)
chr2 (32-90)||(31284035-31284093)
chr2 (23-77)||(44860320-44860374)
chr2 (32-101)||(4332902-4332971)
chr2 (29-90)||(15909643-15909704)
chr2 (33-90)||(21091710-21091767)
chr2 (33-90)||(21374714-21374771)
chr2 (29-90)||(31808064-31808125)
chr2 (31-79)||(42832289-42832337)
chr2 (23-70)||(5367199-5367246)
chr2 (54-120)||(12224177-12224244)
chr2 (23-90)||(20242732-20242799)
chr2 (23-90)||(30527600-30527667)
chr2 (35-101)||(10535776-10535842)
chr2 (33-99)||(15972851-15972917)
chr2 (31-69)||(23921261-23921299)
chr2 (23-69)||(44605144-44605190)
chr2 (33-90)||(11223878-11223935)
chr2 (31-88)||(12668436-12668493)
chr2 (29-78)||(19613624-19613673)
chr2 (33-98)||(20473301-20473366)
chr2 (33-90)||(24894376-24894433)
chr2 (33-90)||(30717545-30717602)
chr2 (33-90)||(37419730-37419787)
chr2 (33-90)||(37558964-37559021)
chr2 (33-90)||(38117174-38117231)
chr2 (33-78)||(39323263-39323308)
chr2 (30-99)||(41942083-41942152)
chr2 (61-121)||(6290113-6290173)
chr2 (23-71)||(18889596-18889644)
chr2 (33-101)||(20539689-20539757)
chr2 (23-71)||(34691810-34691858)
chr2 (23-71)||(34714222-34714270)
chr2 (30-94)||(37497103-37497167)
chr2 (23-87)||(39279665-39279729)
[»] chr7 (51 HSPs)
chr7 (23-119)||(15902780-15902876)
chr7 (23-104)||(7328696-7328777)
chr7 (23-97)||(20549771-20549845)
chr7 (23-101)||(26329387-26329465)
chr7 (29-90)||(32308107-32308168)
chr7 (33-101)||(27945017-27945085)
chr7 (23-90)||(5835234-5835301)
chr7 (23-98)||(22484004-22484079)
chr7 (23-102)||(22602715-22602794)
chr7 (23-105)||(3721066-3721147)
chr7 (33-99)||(7438684-7438750)
chr7 (29-90)||(22868029-22868090)
chr7 (32-80)||(29787383-29787431)
chr7 (33-101)||(30813788-30813856)
chr7 (30-101)||(5235962-5236033)
chr7 (23-90)||(9482921-9482988)
chr7 (23-121)||(19206005-19206104)
chr7 (34-101)||(30731013-30731080)
chr7 (31-90)||(43249980-43250039)
chr7 (24-90)||(6630918-6630984)
chr7 (32-121)||(12289069-12289159)
chr7 (29-99)||(18013085-18013155)
chr7 (33-107)||(24105648-24105722)
chr7 (23-101)||(26733280-26733358)
chr7 (23-104)||(1433427-1433508)
chr7 (29-82)||(5548671-5548724)
chr7 (29-66)||(17307904-17307941)
chr7 (33-90)||(23191883-23191940)
chr7 (33-86)||(24339633-24339686)
chr7 (33-86)||(25481893-25481946)
chr7 (1-69)||(27732221-27732290)
chr7 (33-101)||(32094035-32094104)
chr7 (30-103)||(48246825-48246898)
chr7 (41-101)||(11722121-11722181)
chr7 (24-76)||(12278836-12278888)
chr7 (33-101)||(13770667-13770735)
chr7 (29-77)||(16341496-16341544)
chr7 (23-79)||(27093418-27093474)
chr7 (23-79)||(27184827-27184883)
chr7 (32-71)||(2424620-2424659)
chr7 (33-96)||(21880133-21880196)
chr7 (33-80)||(28155567-28155614)
chr7 (23-101)||(2425738-2425816)
chr7 (29-71)||(17851437-17851479)
chr7 (31-77)||(19992001-19992047)
chr7 (23-88)||(2948672-2948737)
chr7 (36-121)||(8090043-8090128)
chr7 (31-71)||(1401031-1401071)
chr7 (29-77)||(8160416-8160464)
chr7 (28-80)||(10377504-10377556)
chr7 (23-79)||(24146814-24146870)
[»] chr6 (61 HSPs)
chr6 (23-90)||(7996383-7996450)
chr6 (23-90)||(8022351-8022418)
chr6 (24-103)||(13851710-13851789)
chr6 (23-121)||(34073352-34073451)
chr6 (23-90)||(7265598-7265665)
chr6 (30-101)||(9658855-9658926)
chr6 (29-88)||(19040341-19040400)
chr6 (24-91)||(26562675-26562742)
chr6 (29-104)||(1532211-1532288)
chr6 (23-101)||(7086771-7086849)
chr6 (23-77)||(9025499-9025553)
chr6 (23-101)||(9027154-9027232)
chr6 (33-118)||(16833267-16833352)
chr6 (32-97)||(34290091-34290156)
chr6 (33-101)||(12696300-12696368)
chr6 (33-120)||(10770689-10770776)
chr6 (23-86)||(13364710-13364773)
chr6 (31-104)||(3398592-3398664)
chr6 (32-101)||(8805586-8805655)
chr6 (33-90)||(16766684-16766741)
chr6 (56-101)||(18803549-18803594)
chr6 (23-80)||(21924940-21924997)
chr6 (33-101)||(8776988-8777056)
chr6 (24-80)||(8931608-8931664)
chr6 (33-101)||(9107385-9107453)
chr6 (33-104)||(1681731-1681802)
chr6 (23-90)||(5732515-5732582)
chr6 (33-88)||(7977845-7977900)
chr6 (23-78)||(9195759-9195814)
chr6 (23-86)||(9629374-9629437)
chr6 (23-90)||(19044451-19044518)
chr6 (23-86)||(33001294-33001357)
chr6 (31-89)||(17341677-17341735)
chr6 (29-101)||(10339136-10339209)
chr6 (33-90)||(17841604-17841661)
chr6 (23-76)||(30866149-30866202)
chr6 (23-79)||(7377977-7378033)
chr6 (29-101)||(13360383-13360455)
chr6 (53-119)||(20370515-20370585)
chr6 (33-97)||(31959139-31959203)
chr6 (33-101)||(34595110-34595178)
chr6 (53-96)||(677818-677861)
chr6 (31-90)||(7938103-7938162)
chr6 (23-86)||(20371115-20371178)
chr6 (32-99)||(32839660-32839727)
chr6 (31-69)||(7569181-7569219)
chr6 (23-69)||(9617442-9617488)
chr6 (23-101)||(10294083-10294161)
chr6 (24-90)||(10842519-10842585)
chr6 (23-80)||(30851599-30851654)
chr6 (31-77)||(32511679-32511725)
chr6 (29-90)||(7723261-7723322)
chr6 (24-65)||(11591876-11591917)
chr6 (29-90)||(24833244-24833305)
chr6 (33-90)||(28152086-28152142)
chr6 (32-69)||(31579239-31579276)
chr6 (33-101)||(426529-426597)
chr6 (33-101)||(8365534-8365602)
chr6 (31-79)||(12686408-12686455)
chr6 (33-77)||(28715295-28715339)
chr6 (42-90)||(33135395-33135443)
[»] chr5 (53 HSPs)
chr5 (23-90)||(3966490-3966557)
chr5 (31-120)||(28588687-28588775)
chr5 (23-104)||(16203800-16203881)
chr5 (33-101)||(21191071-21191139)
chr5 (33-90)||(43001787-43001844)
chr5 (23-118)||(11685898-11685993)
chr5 (33-101)||(21522726-21522794)
chr5 (33-101)||(21533292-21533360)
chr5 (29-97)||(27144443-27144511)
chr5 (33-120)||(41633692-41633779)
chr5 (29-99)||(18592051-18592121)
chr5 (43-101)||(26716120-26716178)
chr5 (43-101)||(26985860-26985918)
chr5 (29-90)||(12264840-12264901)
chr5 (24-77)||(41091263-41091316)
chr5 (30-90)||(6035470-6035529)
chr5 (33-101)||(6326312-6326380)
chr5 (29-77)||(6471900-6471948)
chr5 (33-101)||(21542006-21542074)
chr5 (33-101)||(24906316-24906384)
chr5 (33-80)||(27932232-27932279)
chr5 (23-77)||(18421846-18421900)
chr5 (33-120)||(21576760-21576849)
chr5 (31-101)||(22013390-22013460)
chr5 (29-95)||(38749574-38749640)
chr5 (33-90)||(6247609-6247666)
chr5 (33-90)||(14674256-14674313)
chr5 (23-76)||(30502393-30502446)
chr5 (23-76)||(30542736-30542789)
chr5 (33-90)||(31084310-31084367)
chr5 (23-76)||(36838544-36838597)
chr5 (33-90)||(39698528-39698585)
chr5 (29-101)||(15410459-15410531)
chr5 (27-91)||(35017023-35017087)
chr5 (37-104)||(19552562-19552629)
chr5 (35-77)||(2419857-2419899)
chr5 (53-99)||(5873548-5873594)
chr5 (31-101)||(14574062-14574132)
chr5 (30-104)||(22423824-22423898)
chr5 (29-79)||(32766954-32767004)
chr5 (33-86)||(8420018-8420071)
chr5 (30-71)||(17593734-17593775)
chr5 (33-90)||(19579688-19579745)
chr5 (29-66)||(24273041-24273078)
chr5 (29-66)||(24389136-24389173)
chr5 (29-90)||(26312756-26312817)
chr5 (23-104)||(37328849-37328930)
chr5 (29-78)||(39205879-39205928)
chr5 (38-99)||(40000555-40000616)
chr5 (23-120)||(2436878-2436976)
chr5 (31-91)||(7997179-7997239)
chr5 (53-101)||(19820429-19820477)
chr5 (23-87)||(23220973-23221037)
[»] chr1 (69 HSPs)
chr1 (31-120)||(36878417-36878507)
chr1 (23-120)||(5898271-5898368)
chr1 (33-120)||(19058871-19058959)
chr1 (33-121)||(27471581-27471669)
chr1 (33-120)||(14359537-14359623)
chr1 (29-96)||(19562632-19562699)
chr1 (33-120)||(48450602-48450689)
chr1 (31-101)||(398778-398848)
chr1 (23-101)||(9709796-9709874)
chr1 (4-89)||(31015031-31015116)
chr1 (33-101)||(5376515-5376583)
chr1 (33-104)||(13011230-13011302)
chr1 (30-90)||(15641042-15641102)
chr1 (29-77)||(40181871-40181919)
chr1 (23-101)||(10572594-10572672)
chr1 (24-90)||(17831537-17831603)
chr1 (32-90)||(25452162-25452220)
chr1 (29-75)||(34712394-34712440)
chr1 (37-90)||(2896140-2896193)
chr1 (33-90)||(3490405-3490462)
chr1 (29-90)||(6427337-6427398)
chr1 (29-78)||(19324561-19324610)
chr1 (33-101)||(1262860-1262928)
chr1 (23-79)||(1864885-1864941)
chr1 (29-101)||(7918222-7918294)
chr1 (29-85)||(12443471-12443527)
chr1 (23-119)||(23636054-23636150)
chr1 (29-85)||(25098566-25098622)
chr1 (35-79)||(26238129-26238173)
chr1 (33-101)||(41877485-41877553)
chr1 (29-80)||(13436455-13436506)
chr1 (37-104)||(21366039-21366106)
chr1 (33-87)||(113289-113343)
chr1 (29-99)||(17754289-17754359)
chr1 (31-101)||(34298412-34298482)
chr1 (33-121)||(51409980-51410069)
chr1 (31-88)||(1486722-1486779)
chr1 (31-101)||(5944257-5944329)
chr1 (29-85)||(14332653-14332709)
chr1 (30-102)||(16927197-16927269)
chr1 (29-85)||(30847731-30847787)
chr1 (33-97)||(38078676-38078740)
chr1 (23-79)||(38503318-38503374)
chr1 (23-67)||(44482240-44482284)
chr1 (42-101)||(609482-609541)
chr1 (22-101)||(10577739-10577818)
chr1 (23-90)||(13997870-13997937)
chr1 (23-78)||(20157355-20157410)
chr1 (29-80)||(25361883-25361934)
chr1 (33-120)||(28273103-28273190)
chr1 (31-90)||(37598819-37598877)
chr1 (23-78)||(38075975-38076030)
chr1 (23-85)||(9828036-9828098)
chr1 (55-97)||(20999588-20999630)
chr1 (31-69)||(24176380-24176418)
chr1 (23-77)||(34371714-34371767)
chr1 (29-119)||(36905955-36906045)
chr1 (31-69)||(39101195-39101233)
chr1 (29-70)||(10233260-10233301)
chr1 (33-90)||(22881631-22881688)
chr1 (33-90)||(31672910-31672967)
chr1 (33-74)||(37055871-37055912)
chr1 (23-80)||(39953151-39953208)
chr1 (33-90)||(42359464-42359521)
chr1 (33-90)||(46348398-46348455)
chr1 (33-101)||(6612186-6612254)
chr1 (59-120)||(35702629-35702691)
chr1 (31-79)||(40747786-40747834)
chr1 (33-101)||(47989474-47989541)
[»] chr3 (57 HSPs)
chr3 (1-120)||(26492182-26492307)
chr3 (23-101)||(25093478-25093556)
chr3 (36-104)||(16000034-16000102)
chr3 (9-86)||(32804529-32804608)
chr3 (31-90)||(25948900-25948959)
chr3 (33-120)||(26508067-26508154)
chr3 (33-91)||(4987306-4987364)
chr3 (31-101)||(8383233-8383303)
chr3 (29-79)||(11313811-11313861)
chr3 (34-120)||(14979138-14979224)
chr3 (29-79)||(16192761-16192811)
chr3 (31-101)||(24205054-24205124)
chr3 (31-101)||(30994895-30994965)
chr3 (33-90)||(21479105-21479162)
chr3 (23-79)||(7928448-7928504)
chr3 (29-77)||(9624641-9624689)
chr3 (35-116)||(10954911-10954994)
chr3 (33-104)||(4990982-4991053)
chr3 (23-86)||(8039840-8039903)
chr3 (23-119)||(8789555-8789652)
chr3 (34-101)||(9800016-9800083)
chr3 (23-102)||(28678278-28678357)
chr3 (23-101)||(11665920-11665998)
chr3 (29-101)||(2731790-2731860)
chr3 (32-101)||(5441045-5441114)
chr3 (32-77)||(11251978-11252023)
chr3 (32-101)||(25064885-25064954)
chr3 (32-77)||(27277852-27277897)
chr3 (33-101)||(3610609-3610677)
chr3 (29-85)||(12703999-12704055)
chr3 (23-91)||(20691305-20691373)
chr3 (33-101)||(28917977-28918045)
chr3 (33-85)||(49651801-49651853)
chr3 (30-77)||(10690274-10690321)
chr3 (29-122)||(1438765-1438852)
chr3 (35-85)||(1830335-1830385)
chr3 (31-85)||(5407260-5407314)
chr3 (28-70)||(11493371-11493413)
chr3 (36-82)||(16789668-16789714)
chr3 (32-86)||(24633757-24633811)
chr3 (31-77)||(34307793-34307839)
chr3 (29-71)||(49505165-49505207)
chr3 (53-90)||(6525715-6525752)
chr3 (33-90)||(10268501-10268558)
chr3 (24-101)||(11658791-11658868)
chr3 (29-90)||(15812832-15812893)
chr3 (33-90)||(20503452-20503509)
chr3 (33-86)||(34185138-34185191)
chr3 (33-86)||(35994753-35994805)
chr3 (23-76)||(45451554-45451607)
chr3 (29-101)||(10455766-10455838)
chr3 (53-101)||(12674536-12674584)
chr3 (33-97)||(14829670-14829733)
chr3 (33-101)||(15796309-15796377)
chr3 (34-90)||(21720751-21720807)
chr3 (33-85)||(34910309-34910361)
chr3 (42-90)||(40052319-40052367)
[»] chr8 (50 HSPs)
chr8 (29-119)||(29775994-29776084)
chr8 (23-90)||(13844601-13844668)
chr8 (33-121)||(22595949-22596038)
chr8 (29-79)||(4611532-4611582)
chr8 (33-119)||(20873027-20873113)
chr8 (29-99)||(24362213-24362283)
chr8 (23-85)||(31236582-31236644)
chr8 (23-85)||(27213539-27213601)
chr8 (24-78)||(34897084-34897138)
chr8 (29-102)||(11803234-11803307)
chr8 (23-80)||(11927091-11927148)
chr8 (33-90)||(36450769-36450826)
chr8 (29-90)||(39954290-39954351)
chr8 (33-101)||(4673440-4673508)
chr8 (29-77)||(14731712-14731760)
chr8 (33-101)||(24669409-24669477)
chr8 (33-101)||(29510319-29510387)
chr8 (23-90)||(4786343-4786410)
chr8 (23-78)||(12606834-12606889)
chr8 (30-101)||(13203617-13203688)
chr8 (31-90)||(20679408-20679467)
chr8 (31-90)||(44067503-44067562)
chr8 (30-80)||(7658460-7658510)
chr8 (32-90)||(37283824-37283882)
chr8 (31-72)||(3025556-3025597)
chr8 (23-80)||(11944662-11944719)
chr8 (30-70)||(14134706-14134746)
chr8 (33-101)||(22651952-22652020)
chr8 (23-103)||(28384999-28385079)
chr8 (33-77)||(40332191-40332235)
chr8 (29-76)||(8798842-8798889)
chr8 (31-90)||(15816142-15816201)
chr8 (31-90)||(25192360-25192419)
chr8 (36-91)||(41831958-41832013)
chr8 (31-101)||(926801-926871)
chr8 (43-120)||(27067323-27067403)
chr8 (33-90)||(7442832-7442889)
chr8 (24-77)||(12570514-12570567)
chr8 (33-90)||(18407706-18407763)
chr8 (23-88)||(25172703-25172768)
chr8 (33-90)||(30271306-30271363)
chr8 (29-90)||(31109529-31109590)
chr8 (29-102)||(36934645-36934718)
chr8 (29-69)||(3508060-3508100)
chr8 (42-90)||(13436988-13437036)
chr8 (33-101)||(22197757-22197825)
chr8 (33-77)||(25566841-25566885)
chr8 (33-89)||(31556985-31557040)
chr8 (29-69)||(34201057-34201097)
chr8 (29-69)||(37225754-37225794)
[»] chr4 (50 HSPs)
chr4 (33-121)||(21945458-21945547)
chr4 (11-86)||(40613441-40613516)
chr4 (31-101)||(16402224-16402294)
chr4 (31-101)||(14126124-14126194)
chr4 (29-90)||(35723395-35723457)
chr4 (29-90)||(15029752-15029813)
chr4 (29-90)||(36635311-36635372)
chr4 (33-101)||(3947781-3947849)
chr4 (31-79)||(8423731-8423779)
chr4 (35-91)||(20743295-20743351)
chr4 (32-91)||(32910537-32910596)
chr4 (31-85)||(24343499-24343553)
chr4 (59-101)||(28720852-28720894)
chr4 (29-90)||(903909-903970)
chr4 (29-90)||(13783268-13783329)
chr4 (30-121)||(21539879-21539976)
chr4 (29-78)||(22440611-22440660)
chr4 (33-121)||(49430981-49431070)
chr4 (32-77)||(56257933-56257978)
chr4 (33-101)||(847927-847995)
chr4 (53-101)||(5832729-5832777)
chr4 (24-80)||(13134447-13134503)
chr4 (33-101)||(19482644-19482712)
chr4 (33-101)||(23293001-23293069)
chr4 (2-70)||(7214504-7214574)
chr4 (29-76)||(15659771-15659818)
chr4 (23-78)||(26504304-26504359)
chr4 (54-105)||(31638068-31638119)
chr4 (29-68)||(46180947-46180986)
chr4 (35-85)||(5654608-5654658)
chr4 (23-69)||(5775363-5775409)
chr4 (29-79)||(9996838-9996888)
chr4 (33-119)||(12797353-12797438)
chr4 (31-69)||(19230322-19230360)
chr4 (33-90)||(30298933-30298991)
chr4 (33-90)||(30327801-30327859)
chr4 (33-111)||(40481603-40481680)
chr4 (23-80)||(4672090-4672147)
chr4 (29-97)||(7970501-7970567)
chr4 (29-90)||(9299066-9299126)
chr4 (23-76)||(16189710-16189763)
chr4 (32-85)||(17425403-17425456)
chr4 (29-74)||(18576048-18576093)
chr4 (29-101)||(5414183-5414255)
chr4 (38-90)||(7012053-7012105)
chr4 (54-90)||(17345451-17345487)
chr4 (31-79)||(35161034-35161082)
chr4 (29-85)||(35952628-35952684)
chr4 (30-70)||(37698719-37698759)
chr4 (34-78)||(38148741-38148785)
[»] scaffold0020 (1 HSPs)
scaffold0020 (23-104)||(135317-135398)
[»] scaffold0004 (1 HSPs)
scaffold0004 (33-90)||(92794-92851)
[»] scaffold0008 (1 HSPs)
scaffold0008 (31-99)||(263385-263453)
[»] scaffold0652 (1 HSPs)
scaffold0652 (33-104)||(477-548)
[»] scaffold0050 (1 HSPs)
scaffold0050 (31-116)||(70238-70324)
[»] scaffold0103 (1 HSPs)
scaffold0103 (33-90)||(51798-51855)
[»] scaffold0223 (1 HSPs)
scaffold0223 (33-101)||(20148-20216)
[»] scaffold0136 (1 HSPs)
scaffold0136 (33-101)||(3864-3932)
[»] scaffold0066 (1 HSPs)
scaffold0066 (33-85)||(33378-33430)
[»] scaffold0306 (1 HSPs)
scaffold0306 (23-90)||(13387-13454)
[»] scaffold0152 (1 HSPs)
scaffold0152 (23-90)||(21873-21940)
[»] scaffold0036 (1 HSPs)
scaffold0036 (23-90)||(9752-9819)
[»] scaffold1528 (1 HSPs)
scaffold1528 (29-99)||(1013-1083)
[»] scaffold0168 (1 HSPs)
scaffold0168 (23-101)||(21019-21097)
[»] scaffold0123 (1 HSPs)
scaffold0123 (23-77)||(44530-44584)
[»] scaffold0007 (1 HSPs)
scaffold0007 (31-101)||(225281-225351)
[»] scaffold0003 (1 HSPs)
scaffold0003 (32-121)||(241549-241639)
[»] scaffold0022 (2 HSPs)
scaffold0022 (29-90)||(99880-99941)
scaffold0022 (30-101)||(90819-90890)
[»] scaffold0018 (2 HSPs)
scaffold0018 (33-90)||(192264-192321)
scaffold0018 (33-101)||(178833-178902)
[»] scaffold0044 (1 HSPs)
scaffold0044 (31-87)||(53170-53226)
[»] scaffold0027 (1 HSPs)
scaffold0027 (33-101)||(46658-46726)
[»] scaffold0376 (1 HSPs)
scaffold0376 (23-77)||(6312-6366)
[»] scaffold0246 (1 HSPs)
scaffold0246 (33-111)||(19542-19619)
[»] scaffold0171 (1 HSPs)
scaffold0171 (31-101)||(23396-23466)
[»] scaffold0361 (1 HSPs)
scaffold0361 (33-85)||(14522-14574)
[»] scaffold0110 (1 HSPs)
scaffold0110 (23-91)||(28836-28904)
[»] scaffold0085 (1 HSPs)
scaffold0085 (24-121)||(26348-26446)
[»] scaffold0053 (1 HSPs)
scaffold0053 (53-101)||(8774-8822)
[»] scaffold0021 (1 HSPs)
scaffold0021 (33-101)||(130458-130526)
[»] scaffold0019 (1 HSPs)
scaffold0019 (33-90)||(71710-71769)


Alignment Details
Target: chr2 (Bit Score: 181; Significance: 6e-98; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 35449589 - 35449365
Alignment:
Q  1 tggtgtcagacatgtgtcgtgcccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtg 100  Q
    ||||||| ||||||||||||| | ||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  35449589 tggtgtcggacatgtgtcgtgtctgacacatataattacactgaattctgtgattttctcaaattattaacagtgttggcttgtcagtgtttgtgtcgtg 35449490  T
Q  101 ttcgtattcgtgcttcatagaagcaaagtaagcattatgaatggaaatagtt-gaaggttgaagaatataggtacctttccttggcagaagtaagcccaa 199  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  35449489 ttcgtattcgtgcttcatagaagtaaagtaagcattatgaatggaaatagttggaaggttgaagaatataggtacctttccttggcagaagtaagcccaa 35449390  T
Q  200 ttaagaagagagttagattgattgt 224  Q
    |||||||||||||||||||||||||    
T  35449389 ttaagaagagagttagattgattgt 35449365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 21782832 - 21782901
Alignment:
Q  32 ataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21782832 ataattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgt 21782901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 37411250 - 37411323
Alignment:
Q  24 cgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc 97  Q
    |||| |||||||| |||||||||| ||| ||||||||||||||||||| ||||||||||||||| || ||||||    
T  37411250 cgacacatataatcacactgaattatgtgattttctcaaattattagcggtgtcggcatgtcagcgtctgtgtc 37411323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 21616810 - 21616738
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| |||||||| |||| ||||  |||||||||    
T  21616810 catataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgt 21616738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 30404865 - 30404953
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcataga 121  Q
    ||||||||||||||| ||| ||||| ||||||||||| | |||||||| |||||||||  ||||| ||| ||||| |||||||||||||    
T  30404865 taattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtcatgtccgtatccgtgcttcataga 30404953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 101
Target Start/End: Complemental strand, 18276575 - 18276497
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||| || ||||||||||||||||  || ||||||||||||||||||| |||||||||| ||||||| ||| ||||||    
T  18276575 ccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgt 18276497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 23718080 - 23718013
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||| ||||||||||||||||||| ||| | ||||||||||||||||| |||||||  |||||||||    
T  23718080 ccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgt 23718013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 24105752 - 24105685
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||| ||||||||||||||||||| ||| | ||||||||||||||||| |||||||  |||||||||    
T  24105752 ccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgt 24105685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 29664056 - 29663985
Alignment:
Q  31 tataattacactgaattctgt-tattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||||| | | |||||| |||||||||||||| ||||| ||||||||||| ||||||||||    
T  29664056 tataattacactgaattatatatattttttcaaattattagcactgtcgacatgtcagtgtctgtgtcgtgt 29663985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 18420447 - 18420520
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 104  Q
    ||||||| || |||||| ||| |||||||||||||||||||||||| ||| ||||||| | ||| |||||||||    
T  18420447 tataattgcattgaattatgtgattttctcaaattattagcagtgttggcgtgtcagtatatgtctcgtgttcg 18420520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 36409641 - 36409730
Alignment:
Q  32 ataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcataga 121  Q
    ||||||||||| |||| ||| ||||| ||||||||| ||| |||||||||||| ||| |  |||||||||  |||| |||||||||||||    
T  36409641 ataattacactaaattatgtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgtctgtatccgtgcttcataga 36409730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 21624311 - 21624239
Alignment:
Q  33 taattacactgaattctgttattttctcaaa-ttattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 104  Q
    ||||||||||||||| || |||||| | ||| |||||||| |||||||| ||||||||| |||||||||||||    
T  21624311 taattacactgaattatgctatttttttaaaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgttcg 21624239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 36756357 - 36756425
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 99  Q
    ||||||||||||||||| ||||||||  ||||||||||||  |||||| | ||||||||| ||||||||    
T  36756357 tataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgtctgtgtcgt 36756425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 896265 - 896198
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||| ||||| |||||| |||| | ||| ||||||||||| |||||||||||||||| |||||||||    
T  896265 ccgacacatatgattacattgaaatatgtgattttctcaaactattagcagtgtcggcgtgtcagtgt 896198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 18841028 - 18841115
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcatag 120  Q
    |||||||||| |||| ||| ||||| ||||||||||||  ||||| || |||||||||   |||||||| ||||| ||||||||||||    
T  18841028 taattacacttaattatgtaattttttcaaattattagttgtgtcagcgtgtcagtgtccatgtcgtgtccgtatacgtgcttcatag 18841115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 28677957 - 28677906
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggc 80  Q
    ||||||||||||||||||| ||| ||||| ||||||||||||| ||||||||    
T  28677957 catataattacactgaattatgtgattttttcaaattattagcggtgtcggc 28677906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 19574024 - 19573970
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtc 85  Q
    ||||||||||||||||| ||||||||||| ||||||||| | |||||||| ||||    
T  19574024 tataattacactgaattatgttattttcttaaattattatcggtgtcggcgtgtc 19573970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 31284093 - 31284035
Alignment:
Q  32 ataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||| || ||| ||| |||||||||||||||||||||||||||| ||| |||||    
T  31284093 ataattacaatggattatgtgattttctcaaattattagcagtgtcggcgtgtaagtgt 31284035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 44860374 - 44860320
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtc 77  Q
    ||||| ||||||||||||||||||| ||  ||||||||||||||||||| |||||    
T  44860374 ccgacacatataattacactgaattatgcgattttctcaaattattagcggtgtc 44860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 4332971 - 4332902
Alignment:
Q  32 ataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||| |||||| ||| |||||| |||||||||| |||||||||||||| ||| | |||| |||||    
T  4332971 ataattacattgaattatgtgattttcccaaattattatcagtgtcggcatgtaagtatctgtgccgtgt 4332902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 15909643 - 15909704
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||||||| ||| ||||||||||| | ||||| || ||||| |||||||||    
T  15909643 catataattacactgaattatgtaattttctcaaaattttagctgtatcggcgtgtcagtgt 15909704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 21091767 - 21091710
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||| | ||||||||||| ||||||||||| |||||||  |||||||||    
T  21091767 taattacactgaagtatgttattttcttaaattattagcggtgtcggtgtgtcagtgt 21091710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 21374714 - 21374771
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||| ||| ||||| ||||||||||||| |||||||| ||| |||||    
T  21374714 taattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgt 21374771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 31808125 - 31808064
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||||||| ||| ||||| | ||||||||||| |||||||  |||||||||    
T  31808125 catataattacactgaattatgtgattttgttaaattattagcggtgtcggtgtgtcagtgt 31808064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 42832289 - 42832337
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcgg 79  Q
    ||||||||||||||| | ||| ||||||||||||||||||| |||||||    
T  42832289 tataattacactgaaatatgtaattttctcaaattattagcggtgtcgg 42832337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 5367246 - 5367199
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattag 70  Q
    ||||| ||||||||||||||||||| ||| |||| |||||||||||||    
T  5367246 ccgacacatataattacactgaattatgtgatttcctcaaattattag 5367199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 120
Target Start/End: Complemental strand, 12224244 - 12224177
Alignment:
Q  54 ttttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttc-gtattcgtgcttcatag 120  Q
    |||| |||||||||||||  ||| ||| ||||| |||||||||||||||| |||| ||||||||||||    
T  12224244 ttttttcaaattattagctatgttggcgtgtcaatgtttgtgtcgtgttcggtatccgtgcttcatag 12224177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 20242732 - 20242799
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||| ||||||||||||||||||| ||| ||||||| |||  |||||  |||||||| |||||||||    
T  20242732 ccgacacatataattacactgaattatgtgattttctaaaaaaattagttgtgtcggcgtgtcagtgt 20242799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 30527600 - 30527667
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||| |||||||||||||| |||| | | ||||||||||||||||| |||||| ||  |||||||||    
T  30527600 ccgacacatataattacactaaattatatgattttctcaaattattaacagtgtgggtgtgtcagtgt 30527667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 10535776 - 10535842
Alignment:
Q  35 attacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||| ||| ||||||||||||||||| | |||||||| | | ||| | ||||||||||    
T  10535776 attacactgaattatgtcattttctcaaattattatcggtgtcggcgtattagtatctgtgtcgtgt 10535842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 15972917 - 15972851
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 99  Q
    ||||||||||||||| ||| ||||| |||||||||||   |||||||| |||||||||  |||||||    
T  15972917 taattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccgtgtcgt 15972851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 69
Target Start/End: Complemental strand, 23921299 - 23921261
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattatta 69  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  23921299 tataattacactgaattatgtaattttctcaaattatta 23921261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 44605144 - 44605190
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattatta 69  Q
    ||||| ||| |||||||| |||||| |||||||||||||||||||||    
T  44605144 ccgacacatgtaattacattgaattatgttattttctcaaattatta 44605190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 11223878 - 11223935
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||| ||||||||| ||||| ||||||| ||||| || |||| ||||    
T  11223878 taattacactgaattatgttattttttcaaaatattagctgtgtcagcgtgtctgtgt 11223935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 12668436 - 12668493
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagt 88  Q
    ||||||||||||||||| ||| ||||| ||||||||||||   ||||||| |||||||    
T  12668436 tataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgtcagt 12668493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 19613624 - 19613673
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcg 78  Q
    ||||| |||||| |||||| |||||||||||||||||||||  |||||||    
T  19613624 catatcattacattgaattatgttattttctcaaattattatgagtgtcg 19613673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 20473366 - 20473301
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcg 98  Q
    ||||||||||||||| | | | ||| | ||||||||||  |||||||||||||||||| |||||||    
T  20473366 taattacactgaattatatgagttttttaaattattagttgtgtcggcatgtcagtgtctgtgtcg 20473301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 24894433 - 24894376
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||| ||||||||| ||| ||||| | ||||||||||| |||||||| |||||||||    
T  24894433 taattgcactgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtgt 24894376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 30717545 - 30717602
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||| ||| ||||| |||||||||||||  ||||||  |||||||||    
T  30717545 taattacactgaattatgtgattttttcaaattattagctttgtcggtttgtcagtgt 30717602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 37419787 - 37419730
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||| ||| ||||| |||||||||| ||  ||||||| |||||||||    
T  37419787 taattacactgaattttgtgattttttcaaattatttgccatgtcggcgtgtcagtgt 37419730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 37559021 - 37558964
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||||| |||||| ||| |||||  |||||||||||| |||||||| |||||||||    
T  37559021 taattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgt 37558964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 38117174 - 38117231
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||| ||| | ||| ||||| ||||||||||||| |||||||| |||||||||    
T  38117174 taattacaccgaagtatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 38117231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 39323308 - 39323263
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcg 78  Q
    ||||||||||||||| ||| ||||| ||||||||||||| ||||||    
T  39323308 taattacactgaattatgtaattttgtcaaattattagcggtgtcg 39323263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 41942152 - 41942083
Alignment:
Q  30 atataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 99  Q
    ||||||||| |||||||| ||| ||||||||||||| ||| | ||| | || ||||||||| ||||||||    
T  41942152 atataattatactgaattatgtaattttctcaaatttttaacggtgactgcgtgtcagtgtctgtgtcgt 41942083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 121
Target Start/End: Complemental strand, 6290173 - 6290113
Alignment:
Q  61 aaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcataga 121  Q
    ||||||||||| ||| || | || ||||||| |||||||||  ||||||||||||||||||    
T  6290173 aaattattagcggtgccgacgtgccagtgttcgtgtcgtgtctgtattcgtgcttcataga 6290113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 18889596 - 18889644
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagc 71  Q
    ||||| ||||| ||||||||||||| ||| |||||||||| ||||||||    
T  18889596 ccgacacatatgattacactgaattatgtgattttctcaatttattagc 18889644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 20539689 - 20539757
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    |||||||||| |||| | | ||||| ||||||||||||| |||||| | |||||||||  |||||||||    
T  20539689 taattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgt 20539757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 34691810 - 34691858
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagc 71  Q
    ||||| ||||||||||||||||||| | | ||||| |||||||||||||    
T  34691810 ccgacacatataattacactgaattatatgattttatcaaattattagc 34691858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 34714222 - 34714270
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagc 71  Q
    ||||| ||||||||||||||||||| | | ||||| |||||||||||||    
T  34714222 ccgacacatataattacactgaattatatgattttatcaaattattagc 34714270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 37497167 - 37497103
Alignment:
Q  30 atataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgt 94  Q
    |||| |||||| |||||| ||  ||||||||||||||||| ||||||||   |||||||||||||    
T  37497167 atattattacattgaattgtggcattttctcaaattattatcagtgtcgatgtgtcagtgtttgt 37497103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 39279729 - 39279665
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcag 87  Q
    ||||| ||||||||||||||||||| | | ||||||||| ||||||| | |||| ||| ||||||    
T  39279729 ccgacacatataattacactgaattatttgattttctcatattattaacggtgttggcgtgtcag 39279665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 6e-24; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 23 - 119
Target Start/End: Complemental strand, 15902876 - 15902780
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcata 119  Q
    ||||| |||||||||||||| |||| ||| ||||| |||||||||||   |||||||||||||||||| |||||||||| |||||||||||||||||    
T  15902876 ccgacacatataattacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagtgtctgtgtcgtgtccgtattcgtgcttcata 15902780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 7328696 - 7328777
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 104  Q
    ||||| |||||||||||||| |||| |||||||||||||||||||||||||| ||| | ||| | ||| |||||||||||||    
T  7328696 ccgacacatataattacactaaattatgttattttctcaaattattagcagtatcgacgtgttaatgtctgtgtcgtgttcg 7328777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 20549845 - 20549771
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc 97  Q
    ||||| |||||||||||||||||||  || ||||||||||||||||||| |||||||  ||||||||| ||||||    
T  20549845 ccgacacatataattacactgaattacgtgattttctcaaattattagcggtgtcggtgtgtcagtgtatgtgtc 20549771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 26329387 - 26329465
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||| ||||||||||||||||||| |||  |||||||||||||||| |  ||||||| ||||||||| ||||||||||    
T  26329387 ccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtgtctgtgtcgtgt 26329465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 32308168 - 32308107
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||| |||||||||||||| ||| ||||||||||||||||||| |||||||| |||||||||    
T  32308168 catacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgt 32308107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 27945085 - 27945017
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||| ||| ||||||||||||||||||  |||||||| |||||||||  |||||||||    
T  27945085 taattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgt 27945017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 5835301 - 5835234
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||| ||||||||||||||||||| ||||||||||||||| ||||||  |||||||| | |||||||    
T  5835301 ccgacacatataattacactgaattatgttattttctcaaactattagtggtgtcggcgtatcagtgt 5835234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 22484079 - 22484004
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcg 98  Q
    ||||| |||||||||| |||||||| ||  ||||||| ||||||||||| |||||||| ||||||||| |||||||    
T  22484079 ccgacacatataattatactgaattatgcaattttctaaaattattagcggtgtcggcgtgtcagtgtctgtgtcg 22484004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 22602715 - 22602794
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgtt 102  Q
    ||||| ||||||||||||||||||| ||| |||||||||||| |||  | |||||||| ||||||||  |||||||||||    
T  22602715 ccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtcagtgcctgtgtcgtgtt 22602794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 3721147 - 3721066
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgt 105  Q
    ||||| |||||||||| ||| |||| ||| |||||||||||||||||||| |||||  ||||||||||  |||||||||||||    
T  3721147 ccgacacatataattatactaaattatgtgattttctcaaattattagca-tgtcgaaatgtcagtgtccgtgtcgtgttcgt 3721066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 7438750 - 7438684
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 99  Q
    |||||||| |||||| ||| ||||| ||||||||||| | |||||||||||||||||||| ||||||    
T  7438750 taattacattgaattatgtgattttttcaaattattaactgtgtcggcatgtcagtgtttatgtcgt 7438684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 22868090 - 22868029
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||  |||||||| |||||||||    
T  22868090 catataattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgt 22868029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 29787383 - 29787431
Alignment:
Q  32 ataattacactgaattctgttattttctcaaattattagcagtgtcggc 80  Q
    |||||||||||||||| ||| ||||||||||||||||||| ||||||||    
T  29787383 ataattacactgaattatgtgattttctcaaattattagcggtgtcggc 29787431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 30813856 - 30813788
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||| ||| |||||||||||||||||||| ||||||  | ||||||| ||| ||||||    
T  30813856 taattacactgaattatgtaattttctcaaattattagcaatgtcggagtatcagtgtctgtctcgtgt 30813788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 5236033 - 5235962
Alignment:
Q  30 atataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||| |||| | | ||||||| ||||||||||| |||||| | ||||||||| ||||||||||    
T  5236033 atataattacactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 5235962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 9482988 - 9482921
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||| ||||||||||||||||||| ||| ||||||||||||||| |||  ||||||  |||||||||    
T  9482988 ccgacacatataattacactgaattgtgtgattttctcaaattatcagcgatgtcggtgtgtcagtgt 9482921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 19206104 - 19206005
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt-tcgtattcgtgcttcataga 121  Q
    ||||| |||||||||| | |||||| ||| ||||||||||||||||||| |||||||| |||  ||||  ||||||||| | |||| ||||||| |||||    
T  19206104 ccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtctggtatccgtgcttaataga 19206005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 30731080 - 30731013
Alignment:
Q  34 aattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    |||||||||||||| ||| |||||||||||||||| || |||||||| || || ||| ||||||||||    
T  30731080 aattacactgaattatgtgattttctcaaattattcgcggtgtcggcgtgccactgtatgtgtcgtgt 30731013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 43250039 - 43249980
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||| ||| ||| ||||||||||||||||| | |||||||| |||||||||    
T  43250039 tataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgt 43249980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 6630918 - 6630984
Alignment:
Q  24 cgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||| |||||||||||||||||||  || | ||||||||||||||||  |||||||| |||||||||    
T  6630918 cgacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagtgt 6630984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 12289159 - 12289069
Alignment:
Q  32 ataattacactgaattctgttattttctcaaattattagcagt-gtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcataga 121  Q
    |||||| ||||||||| ||| |||||||||||||||||||||| | |||| |||| ||||  |||| ||||  |||| |||||||||||||    
T  12289159 ataattccactgaattatgtgattttctcaaattattagcagtggccggcgtgtcggtgtccgtgttgtgtctgtatccgtgcttcataga 12289069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 18013085 - 18013155
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 99  Q
    ||||||||||||||||||| ||| ||||| | |||||||||| |||||| | ||||||||||  |||||||    
T  18013085 catataattacactgaattatgtaatttttttaaattattagtagtgtcagaatgtcagtgtccgtgtcgt 18013155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 24105722 - 24105648
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtat 107  Q
    ||||||||||||||  ||  ||||| ||||||||||||| |||||||| |||||||||  ||||||||| |||||    
T  24105722 taattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgtat 24105648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 101
Target Start/End: Complemental strand, 26733358 - 26733280
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||| ||| |||||| |||||||| ||| ||||| ||||||||||||| |||||| | |||||||||  |||||||||    
T  26733358 ccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 26733280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 1433508 - 1433427
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 104  Q
    ||||| |||||||||||||  |||  ||| ||||||||||||||||| | |||||||| ||||| |||  ||||||||||||    
T  1433508 ccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcg 1433427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 5548724 - 5548671
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcat 82  Q
    ||||||||||||||||||| | | ||||||||||||||| ||| ||||||||||    
T  5548724 catataattacactgaattatttgattttctcaaattatcagcggtgtcggcat 5548671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 17307941 - 17307904
Alignment:
Q  29 catataattacactgaattctgttattttctcaaatta 66  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  17307941 catataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 23191940 - 23191883
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||| | ||| ||||||||||||||||||| |||||||| | |||||||    
T  23191940 taattacactgaaatatgtgattttctcaaattattagcggtgtcggcgtatcagtgt 23191883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 24339686 - 24339633
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtca 86  Q
    ||||||||||||||| ||| ||||| ||||||||||||| |||||||| |||||    
T  24339686 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtca 24339633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 25481946 - 25481893
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtca 86  Q
    ||||||||||||||| ||| ||||| ||||||||||||| |||||||| |||||    
T  25481946 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtca 25481893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 27732221 - 27732290
Alignment:
Q  1 tggtgtcagacatgtgtcgtgc-ccgacccatataattacactgaattctgttattttctcaaattatta 69  Q
    ||||||| ||||| |||||||  ||||| ||||||||||||||||||| ||| ||||||| |||||||||    
T  27732221 tggtgtcggacatatgtcgtgtaccgacacatataattacactgaattatgtaattttcttaaattatta 27732290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 32094035 - 32094104
Alignment:
Q  33 taattacactgaattctgttattttct-caaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||| ||| ||||| | |||||||||||  |||| ||||||| ||||||||||||||||    
T  32094035 taattacactgaattatgtgatttttttcaaattattagttgtgttggcatgttagtgtttgtgtcgtgt 32094104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 48246825 - 48246898
Alignment:
Q  30 atataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttc 103  Q
    ||||||||||| ||| || ||| |||||||||||||| || |||||||| | ||||| ||| ||||||||||||    
T  48246825 atataattacattgagttgtgtgattttctcaaattaataacagtgtcgacgtgtcattgtctgtgtcgtgttc 48246898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 11722121 - 11722181
Alignment:
Q  41 ctgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||| ||| ||||||||||||| ||||| |||||||| |||||||||  |||||||||    
T  11722121 ctgaattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgt 11722181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 12278888 - 12278836
Alignment:
Q  24 cgacccatataattacactgaattctgttattttctcaaattattagcagtgt 76  Q
    |||| ||||||||||||||||||| ||| ||||||| ||||||||| ||||||    
T  12278888 cgacacatataattacactgaattatgtcattttcttaaattattatcagtgt 12278836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 13770735 - 13770667
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||| ||| ||||| | ||||||||||| |||||||| | |||||||  |||||||||    
T  13770735 taattacactgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtccgtgtcgtgt 13770667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 16341544 - 16341496
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtc 77  Q
    |||||||||||||| |||| ||| ||||||||||||||||| |||||||    
T  16341544 catataattacacttaattatgtgattttctcaaattattatcagtgtc 16341496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 27093418 - 27093474
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcgg 79  Q
    ||||| |||||||||||||| |||| ||| ||||||| ||||||||||| |||||||    
T  27093418 ccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtcgg 27093474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 27184883 - 27184827
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcgg 79  Q
    ||||| |||||||||||||| |||| ||| ||||||| ||||||||||| |||||||    
T  27184883 ccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtcgg 27184827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 71
Target Start/End: Complemental strand, 2424659 - 2424620
Alignment:
Q  32 ataattacactgaattctgttattttctcaaattattagc 71  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  2424659 ataattacactgaattatgtgattttctcaaattattagc 2424620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 21880196 - 21880133
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgt 96  Q
    ||||||||||||||| ||| |||||||||||||||||||  ||||  ||||| |||||| ||||    
T  21880196 taattacactgaattatgtaattttctcaaattattagcgatgtccacatgttagtgttcgtgt 21880133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 28155614 - 28155567
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggc 80  Q
    ||||||||| ||||| ||| ||||||||||||||||||| ||||||||    
T  28155614 taattacaccgaattatgtaattttctcaaattattagcggtgtcggc 28155567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 2425738 - 2425816
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||| |||||| || |||| |||| ||| ||||||||||||||||| | ||| |||| ||||||| | ||||||||||    
T  2425738 ccgacacatatagttccacttaattatgtgattttctcaaattattaacggtgccggcgtgtcagtatctgtgtcgtgt 2425816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 17851479 - 17851437
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagc 71  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||    
T  17851479 catataattacactgaattatgtgattttctaaaattattagc 17851437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 19992047 - 19992001
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtc 77  Q
    ||||||||||||||| | ||| ||||||||||||||||||| |||||    
T  19992047 tataattacactgaaatatgtgattttctcaaattattagctgtgtc 19992001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 2948737 - 2948672
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagt 88  Q
    ||||| |||||||||||||| ||||  || ||||||| ||||||| ||| |||||||| |||||||    
T  2948737 ccgacacatataattacactaaattacgtgattttctaaaattatcagcggtgtcggcgtgtcagt 2948672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 8090043 - 8090128
Alignment:
Q  36 ttacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcataga 121  Q
    ||||||||||||  || || ||||||||||| |||  ||||| || ||||| |||||||||||||| | |||| ||| ||||||||    
T  8090043 ttacactgaattacgtgatattctcaaattactagtggtgtctgcgtgtcattgtttgtgtcgtgtccctatttgtgattcataga 8090128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 1401071 - 1401031
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagc 71  Q
    ||||||||||||||||| ||| | |||||||||||||||||    
T  1401071 tataattacactgaattatgtgagtttctcaaattattagc 1401031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 8160464 - 8160416
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtc 77  Q
    |||||||||||||| |||| ||| ||||||| ||||||||||| |||||    
T  8160464 catataattacactaaattatgtaattttcttaaattattagcggtgtc 8160416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 10377556 - 10377504
Alignment:
Q  28 ccatataattacactgaattctgttattttctcaaattattagcagtgtcggc 80  Q
    |||||||||||||||||||| | | ||||||| | ||||||| ||||||||||    
T  10377556 ccatataattacactgaattatatgattttcttatattattaacagtgtcggc 10377504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 24146870 - 24146814
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcgg 79  Q
    ||||| |||||||||| | |||||| ||| ||||||| |||||||||||| ||||||    
T  24146870 ccgacacatataattatattgaattatgtgattttctaaaattattagcattgtcgg 24146814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 6e-21; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 7996383 - 7996450
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||| ||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||    
T  7996383 ccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgt 7996450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 8022418 - 8022351
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||| ||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||    
T  8022418 ccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgt 8022351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 103
Target Start/End: Complemental strand, 13851789 - 13851710
Alignment:
Q  24 cgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttc 103  Q
    |||| |||||||||||||||||||  |||||||||||||||||||||| |||||| | |||||||||  |||||||||||    
T  13851789 cgacacatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgttc 13851710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 34073352 - 34073451
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttc-gtattcgtgcttcataga 121  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||||  ||| |||||||||||||  ||||||||| | || | |||||||||||||    
T  34073352 ccgacccatataattacactgaattatgagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtccagtgtccgtgcttcataga 34073451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 7265598 - 7265665
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||| ||||||||||||||||||| ||| ||||||||||||||||||| |||| ||| |||||||||    
T  7265598 ccgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgt 7265665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 9658926 - 9658855
Alignment:
Q  30 atataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    |||||||||||||||||| ||| ||||||| ||||||||||| |||||||| |||||||||  |||||||||    
T  9658926 atataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgt 9658855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 19040400 - 19040341
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagt 88  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| |||||||| |||||||    
T  19040400 catataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 19040341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 26562742 - 26562675
Alignment:
Q  24 cgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtt 91  Q
    |||| ||||||||||||||||||| ||| ||||||||||||| |||||||||||||| |||| |||||    
T  26562742 cgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtccgtgtt 26562675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 1532288 - 1532211
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagc--agtgtcggcatgtcagtgtttgtgtcgtgttcg 104  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||   |||||| | |||||||||||||||||||||||    
T  1532288 catataattacactgaattatgtaattttatcaaattattagcggtgtgtcgacgtgtcagtgtttgtgtcgtgttcg 1532211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 101
Target Start/End: Complemental strand, 7086849 - 7086771
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||| |||||||||||||| |||| ||| ||||||||||||||||||||||| || | |||| |||| ||||||||||    
T  7086849 ccgacacatataattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgt 7086771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 9025499 - 9025553
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtc 77  Q
    ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  9025499 ccgacacatataattacactgaattatgtgattttctcaaattattagcagtgtc 9025553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 101
Target Start/End: Complemental strand, 9027232 - 9027154
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||| ||||||||||||| ||||| ||| ||| ||||||||||||||| |||||||| |||||||||  |||||||||    
T  9027232 ccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgt 9027154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 16833352 - 16833267
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcat 118  Q
    ||||||||||||| | ||| ||||| ||||||||||||  |||||||| ||||||||| |||||||||| |||||  |||||||||    
T  16833352 taattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtccgtatcagtgcttcat 16833267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 34290091 - 34290156
Alignment:
Q  32 ataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc 97  Q
    |||||||||||||||| ||| ||| || |||||||||||  |||||||||||||||||||||||||    
T  34290091 ataattacactgaattatgtgattctcgcaaattattagttgtgtcggcatgtcagtgtttgtgtc 34290156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 12696368 - 12696300
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||| ||| ||||| ||||||||||||| |||||||| |||||||||  |||||||||    
T  12696368 taattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 12696300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 10770689 - 10770776
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcatag 120  Q
    ||||||||||||||| ||| ||||| ||||||||||||  |||| ||| |||||||||   |||||||| ||||| ||||||||||||    
T  10770689 taattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtccatgtcgtgtccgtatccgtgcttcatag 10770776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 13364710 - 13364773
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtca 86  Q
    ||||| ||||| ||||||||||||| | | ||||||||||||||| ||||||||||||||||||    
T  13364710 ccgacacatatgattacactgaattatatgattttctcaaattataagcagtgtcggcatgtca 13364773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 3398664 - 3398592
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 104  Q
    ||||||||||||||||| | | ||||| ||||||||||||| |||||||| |||||||||  ||||||||||||    
T  3398664 tataattacactgaattatatgatttt-tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgttcg 3398592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 8805586 - 8805655
Alignment:
Q  32 ataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||| |||| ||| ||||||||||||||||||||||| || | |||| |||| ||||||||||    
T  8805586 ataattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgt 8805655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 16766741 - 16766684
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||| ||| ||||| ||||||||||||| |||||||| |||||||||    
T  16766741 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 16766684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 18803549 - 18803594
Alignment:
Q  56 ttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||    
T  18803549 ttctcgaattattagcggtgtcggcatgtcagtgtttgtgtcgtgt 18803594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 21924940 - 21924997
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggc 80  Q
    ||||| ||||||||||||||||||| | | || |||||||||||||||||||||||||    
T  21924940 ccgacacatataattacactgaattatttgatattctcaaattattagcagtgtcggc 21924997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 8776988 - 8777056
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||| ||| ||||| ||||||||||||  |||||||| |||||||||  |||||||||    
T  8776988 taattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgt 8777056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 8931608 - 8931664
Alignment:
Q  24 cgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggc 80  Q
    |||| |||||||||| |||||||| ||||||||||||||||| ||||| ||||||||    
T  8931608 cgacacatataattatactgaattatgttattttctcaaatttttagctgtgtcggc 8931664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 9107385 - 9107453
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||| ||| ||||| ||||||||||||| |||||||| ||| |||||  |||||||||    
T  9107385 taattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgt 9107453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 1681802 - 1681731
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 104  Q
    |||||||||||||||  || ||||| ||||||||||||  |||||||| ||| ||||| |||||||||||||    
T  1681802 taattacactgaattacgtgattttttcaaattattagttgtgtcggcgtgttagtgtatgtgtcgtgttcg 1681731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 5732515 - 5732582
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||| |||||||||||||| || | ||| ||||||||||||||||| | |||||||| |||||||||    
T  5732515 ccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgt 5732582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 7977845 - 7977900
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagt 88  Q
    ||||||||||||||| ||| ||||| ||||||||||||| |||||||| |||||||    
T  7977845 taattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagt 7977900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 9195759 - 9195814
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcg 78  Q
    ||||| |||||||||||||| |||| ||| |||||||||||||||||| |||||||    
T  9195759 ccgacacatataattacactaaattatgtcattttctcaaattattaggagtgtcg 9195814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 9629437 - 9629374
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtca 86  Q
    ||||| |||||||||||| |||||| ||| |||||||||||||||| || |||||||| |||||    
T  9629437 ccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgtca 9629374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 19044518 - 19044451
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||| |||||||| |||||||||| ||| || |||||||||||||||  |||||||| |||||||||    
T  19044518 ccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgt 19044451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 33001294 - 33001357
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtca 86  Q
    ||||| |||||||||||| | |||| ||| ||||| |||||||||||||||||||||| |||||    
T  33001294 ccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgtca 33001357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 17341677 - 17341735
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtg 89  Q
    ||||||||||||||||| ||| ||||| ||||||||||| | |||||||| ||||||||    
T  17341677 tataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagtg 17341735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 10339136 - 10339209
Alignment:
Q  29 catataatta-cactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    |||||||||| ||||||||| ||| |||||||||||||| | || |||||||| ||||||||||  ||||||||    
T  10339136 catataattaacactgaattatgtgattttctcaaattaatcgcggtgtcggcgtgtcagtgttcatgtcgtgt 10339209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 17841604 - 17841661
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||||||| |||| ||| ||||| ||||||||||||| |||||||| |||||||||    
T  17841604 taattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 17841661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 30866149 - 30866202
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgt 76  Q
    ||||| |||||||||||| |||||| ||| ||||||||||||||||||| ||||    
T  30866149 ccgacacatataattacattgaattatgtgattttctcaaattattagcggtgt 30866202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 7378033 - 7377977
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcgg 79  Q
    ||||| |||||||||||| |||||| ||| ||||||||||||| ||||| |||||||    
T  7378033 ccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgtcgg 7377977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 13360383 - 13360455
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||||||| ||| |||||||||||||| |||  |||||| | |||| ||||| || ||||||    
T  13360383 catataattacactgaattatgtgattttctcaaattactagtggtgtcgacgtgtctgtgttcgtatcgtgt 13360455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 20370515 - 20370585
Alignment:
Q  53 attttctcaaattattagcagtgtcggcatgtcagtgt---ttgtgt-cgtgttcgtattcgtgcttcata 119  Q
    ||||||||||||||||||||| ||||||||||| ||||   | |||| ||||| |||||||||||||||||    
T  20370515 attttctcaaattattagcagagtcggcatgtcggtgtctatagtgtccgtgtccgtattcgtgcttcata 20370585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 31959203 - 31959139
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc 97  Q
    ||||||||||| ||| ||| ||||| ||||||||||||| ||| |||| |||||||||| |||||    
T  31959203 taattacactgcattatgtgattttttcaaattattagctgtgacggcgtgtcagtgttcgtgtc 31959139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 34595178 - 34595110
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||| ||| ||||| ||||||||||||  |||||||| ||||| |||  |||||||||    
T  34595178 taattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgt 34595110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 677861 - 677818
Alignment:
Q  53 attttctcaaattattagcagtgtcggcatgtcagtgtttgtgt 96  Q
    ||||||||||||||||| |||||||||| ||||||||| |||||    
T  677861 attttctcaaattattaacagtgtcggcgtgtcagtgtctgtgt 677818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 7938162 - 7938103
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||||||||| |||| | | ||||| ||||||||||||| |||||||| |||||||||    
T  7938162 tataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgt 7938103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 20371115 - 20371178
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtca 86  Q
    ||||| |||||||| ||| ||| || ||| ||||||||||||||||||| |||||||| |||||    
T  20371115 ccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtgtca 20371178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 32839660 - 32839727
Alignment:
Q  32 ataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 99  Q
    ||||||| |||| ||| ||| ||||||||||||||||| ||||||| |||||||  ||| ||||||||    
T  32839660 ataattatactggattatgtgattttctcaaattattaacagtgtcagcatgtcgatgtctgtgtcgt 32839727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 69
Target Start/End: Original strand, 7569181 - 7569219
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattatta 69  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  7569181 tataattacactgaattatgtaattttctcaaattatta 7569219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 9617488 - 9617442
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattatta 69  Q
    ||||| |||||||||||| |||||| ||| |||||||||||||||||    
T  9617488 ccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 101
Target Start/End: Complemental strand, 10294161 - 10294083
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||| |||||||||||| |||| | ||  ||| ||||||||||||||| || ||||||||||||| |  |||||||||    
T  10294161 ccgacacatataattacattgaaatatgcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtcgtgt 10294083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 10842585 - 10842519
Alignment:
Q  24 cgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||| ||||| |||||||| |||| ||| ||||| ||||||||||||| |||||||| |||| ||||    
T  10842585 cgacacatatgattacactaaattatgtgattttttcaaattattagcggtgtcggcgtgtccgtgt 10842519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 30851654 - 30851599
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggc 80  Q
    ||||| |||||||||||| |||||| ||  ||||||| ||||||||||||||||||||    
T  30851654 ccgacacatataattacattgaattgtg--attttcttaaattattagcagtgtcggc 30851599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 32511679 - 32511725
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtc 77  Q
    ||||||||||||||||| ||| ||||||| ||||||||||| |||||    
T  32511679 tataattacactgaattatgtgattttcttaaattattagcggtgtc 32511725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 7723261 - 7723322
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||  ||||||| | | |||||||||||||||||||||||||  | |||||||||    
T  7723261 catataattatgctgaattatatgattttctcaaattattagcagtgtccacgtgtcagtgt 7723322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 11591876 - 11591917
Alignment:
Q  24 cgacccatataattacactgaattctgttattttctcaaatt 65  Q
    |||| ||||||||||||||||||| ||| |||||||||||||    
T  11591876 cgacacatataattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 24833244 - 24833305
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||||||||||| |||| ||  ||||||| || ||||||| ||||||||| |||||||||    
T  24833244 catataattacactaaattatgcgattttcttaacttattagtagtgtcggcgtgtcagtgt 24833305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 28152142 - 28152086
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||| ||| ||||| |||||||||||||  ||||||| |||||||||    
T  28152142 taattacactgaattatgtgatttt-tcaaattattagctttgtcggcgtgtcagtgt 28152086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 69
Target Start/End: Original strand, 31579239 - 31579276
Alignment:
Q  32 ataattacactgaattctgttattttctcaaattatta 69  Q
    |||||||||||||||| ||| |||||||||||||||||    
T  31579239 ataattacactgaattatgtgattttctcaaattatta 31579276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 426529 - 426597
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    |||||||| | |||| ||| ||||| ||||||||||| | |||||||| |||||||||  |||||||||    
T  426529 taattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgt 426597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 8365534 - 8365602
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||| ||||| ||| || || ||||||||||||  |||||||| |||||||||  |||||||||    
T  8365534 taattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgt 8365602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 12686408 - 12686455
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcgg 79  Q
    ||||||||||||||||  ||| ||||||| |||||||||||||||||||    
T  12686408 tataattacactgaata-tgtgattttcttaaattattagcagtgtcgg 12686455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 28715339 - 28715295
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtc 77  Q
    ||||||||||||||| ||| ||||| ||||||||||||| |||||    
T  28715339 taattacactgaattatgtcattttttcaaattattagccgtgtc 28715295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 33135443 - 33135395
Alignment:
Q  42 tgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||| |||||||||| |||||||||| ||| |||| |||||||||||    
T  33135443 tgaattgtgttattttcacaaattattatcagagtcgacatgtcagtgt 33135395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 3966557 - 3966490
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||| ||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||    
T  3966557 ccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtcagtgt 3966490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 31 - 120
Target Start/End: Original strand, 28588687 - 28588775
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcatag 120  Q
    ||||||||||||||||| ||| ||||||||||||||||| | |||||||| ||||| || || |||||||| ||||||||||||||||||    
T  28588687 tataattacactgaattatgtgattttctcaaattattaccggtgtcggcgtgtcaatg-ttatgtcgtgtccgtattcgtgcttcatag 28588775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 16203800 - 16203881
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 104  Q
    ||||| |||||||||||||| |||| ||  |||||||||||||||||||||||||||||||| |||||  ||||| ||||||    
T  16203800 ccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcggcatgttagtgtccgtgtcatgttcg 16203881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 21191071 - 21191139
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||| ||| ||||| ||||||||||||| ||||||||||||||||||  |||||||||    
T  21191071 taattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgt 21191139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 43001844 - 43001787
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||| ||| ||||| |||||||||||||||||||| |||||||||||    
T  43001844 taattacactgaattatgtaattttttcaaattattagcagtgtcgacatgtcagtgt 43001787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 11685993 - 11685898
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgt-cgtgttcgtattcgtgcttcat 118  Q
    ||||| |||||||||||||| |||| ||  | ||||||||||||||||| ||||||||||||||||| | |||| ||||| ||||| ||||||||||    
T  11685993 ccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcggcatgtcagtg-tcgtgtccgtgtccgtatccgtgcttcat 11685898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 21522794 - 21522726
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||| ||||||||| | ||||||||||| |||||||| |||||||||  |||||||||    
T  21522794 taattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 21522726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 21533360 - 21533292
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||| ||||||||| | ||||||||||| |||||||| |||||||||  |||||||||    
T  21533360 taattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 21533292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 27144511 - 27144443
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc 97  Q
    |||||||||||||| |||| ||| |||| |||||||||||||| |||||||| ||||||||| ||||||    
T  27144511 catataattacactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtcagtgtctgtgtc 27144443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 120
Target Start/End: Complemental strand, 41633779 - 41633692
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcatag 120  Q
    ||||||||||||||| ||| | ||| ||||||||||||| |||||||  ||||||| | ||||| |||| |||||||||| |||||||    
T  41633779 taattacactgaattatgtaaatttttcaaattattagctgtgtcggagtgtcagtatctgtgtggtgtccgtattcgtgtttcatag 41633692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 18592121 - 18592051
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 99  Q
    |||||||||||| |||||| ||| ||||||| ||| ||||||| |||||||||| ||||||||| ||||||    
T  18592121 catataattacattgaattatgtaattttcttaaaatattagcggtgtcggcatatcagtgtttatgtcgt 18592051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 26716178 - 26716120
Alignment:
Q  43 gaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||| | ||||||||    
T  26716178 gaattatgtgattttctcaaattattagcagtgtcggcatgtcaatgtctatgtcgtgt 26716120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 26985918 - 26985860
Alignment:
Q  43 gaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||| | ||||||||    
T  26985918 gaattatgtgattttctcaaattattagcagtgtcggcatgtcaatgtctatgtcgtgt 26985860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 12264840 - 12264901
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||||||  ||| |||||||||||| |||||| |||| |||||||||||||    
T  12264840 catataattacactgaatcatgtaattttctcaaataattagcggtgttggcatgtcagtgt 12264901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 41091263 - 41091316
Alignment:
Q  24 cgacccatataattacactgaattctgttattttctcaaattattagcagtgtc 77  Q
    |||| ||||||||||||||||||| ||| |||||||||||| ||||||||||||    
T  41091263 cgacacatataattacactgaattatgtgattttctcaaatcattagcagtgtc 41091316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 6035529 - 6035470
Alignment:
Q  30 atataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||||||||||||||| | |||||| |||||||||||||| |||||||| |||||||||    
T  6035529 atataattacactgaattatattattt-ctcaaattattagcggtgtcggcgtgtcagtgt 6035470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 6326312 - 6326380
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||| ||| |||||||||||||| ||||  ||||||| |||||||||  |||||||||    
T  6326312 taattacactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgt 6326380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 6471900 - 6471948
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtc 77  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| |||||    
T  6471900 catataattacactgaattatgtgattttctcaaattattagccgtgtc 6471948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 21542074 - 21542006
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||| |||||| || | ||||||||||  |||||||||||||| ||| ||||||||||    
T  21542074 taattacactgaattatgttatctttttaaattattagttgtgtcggcatgtcaatgtctgtgtcgtgt 21542006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 24906316 - 24906384
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||| ||| ||||| ||||||||||| | |||| ||| |||||||||| |||||||||    
T  24906316 taattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgttcgtgtcgtgt 24906384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 27932279 - 27932232
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggc 80  Q
    ||||||||||||||| ||| ||||||||||||||||||| ||||||||    
T  27932279 taattacactgaattatgtaattttctcaaattattagcggtgtcggc 27932232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 18421846 - 18421900
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtc 77  Q
    ||||| ||||||||||||||| ||| ||| ||||||||||||||| |||||||||    
T  18421846 ccgacacatataattacactggattatgtgattttctcaaattatcagcagtgtc 18421900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 21576760 - 21576849
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc--gtgttcgtattcgtgcttcatag 120  Q
    ||||||||||||||| ||| ||||| ||||||||||||| |||| ||| | |||||||| |||||  ||||  |||| ||||||||||||    
T  21576760 taattacactgaattatgtgattttttcaaattattagctgtgttggcgtatcagtgttcgtgtccagtgtctgtatccgtgcttcatag 21576849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 22013460 - 22013390
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    |||||||||||| |||| ||| |||||  |||||||||||| |||||||| |||||||||  |||||||||    
T  22013460 tataattacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 22013390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 38749574 - 38749640
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtg 95  Q
    |||||||||||| |||||| ||| ||||| ||||||||||| | |||||| |||||| |||||||||    
T  38749574 catataattacattgaattatgtcattttttcaaattattatcggtgtcgacatgtccgtgtttgtg 38749640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 6247666 - 6247609
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||| ||| ||||| ||||||||||||  |||||||| |||||||||    
T  6247666 taattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgt 6247609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 14674313 - 14674256
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||||||| |||| ||| ||||| ||||||||||||| |||||||| |||||||||    
T  14674313 taattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 14674256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 30502393 - 30502446
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgt 76  Q
    ||||| |||||||||||||||||||  || ||||||||||||||||||| ||||    
T  30502393 ccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30502446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 30542736 - 30542789
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgt 76  Q
    ||||| |||||||||||||||||||  || ||||||||||||||||||| ||||    
T  30542736 ccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30542789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 31084367 - 31084310
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||||| |||||| ||| ||||| ||||||||||||| |||||||| |||||||||    
T  31084367 taattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 31084310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 36838597 - 36838544
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgt 76  Q
    ||||| |||||||||||||| |||| ||| ||||||||||||||||||| ||||    
T  36838597 ccgacacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 39698585 - 39698528
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||| ||| ||||| ||||||||||||| ||||| || |||||||||    
T  39698585 taattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgt 39698528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 15410459 - 15410531
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||| ||||||||||||  | | ||||||| ||||||||||| |||||||| |||||||||  |||||||||    
T  15410459 catatgattacactgaatcatataattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgt 15410531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 35017087 - 35017023
Alignment:
Q  27 cccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtt 91  Q
    |||||||||||||||| |||| ||| ||||||||||||||||||  || ||||| |||| |||||    
T  35017087 cccatataattacactaaattatgtgattttctcaaattattagtggtttcggcgtgtcggtgtt 35017023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 104
Target Start/End: Original strand, 19552562 - 19552629
Alignment:
Q  37 tacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 104  Q
    |||||| |||| ||| ||||| ||||||||||| | |||||||| |||||||||  ||||||||||||    
T  19552562 tacacttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgttcg 19552629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 77
Target Start/End: Complemental strand, 2419899 - 2419857
Alignment:
Q  35 attacactgaattctgttattttctcaaattattagcagtgtc 77  Q
    ||||||||||||| ||| ||||||||||||||||| |||||||    
T  2419899 attacactgaattgtgtaattttctcaaattattatcagtgtc 2419857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 5873548 - 5873594
Alignment:
Q  53 attttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 99  Q
    ||||||||||||||||||  ||||||||||||||||||  |||||||    
T  5873548 attttctcaaattattagaggtgtcggcatgtcagtgtccgtgtcgt 5873594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 14574062 - 14574132
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||||| | | ||||  |||||||||||   |||||||| |||| |||||||||||||||    
T  14574062 tataattacactgaattatatcatttcatcaaattattactcgtgtcggcgtgtcggtgtttgtgtcgtgt 14574132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 22423824 - 22423898
Alignment:
Q  30 atataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 104  Q
    ||||||||| | |||||| ||| |||||||||||||||||| |||||| |  ||||||| |  ||||||||||||    
T  22423824 atataattatattgaattatgtgattttctcaaattattagtagtgtcagggtgtcagtatccgtgtcgtgttcg 22423898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 32766954 - 32767004
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcgg 79  Q
    |||||||||||| |||||| ||  ||||||||||||||||||| |||||||    
T  32766954 catataattacattgaattgtgcgattttctcaaattattagcggtgtcgg 32767004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 8420071 - 8420018
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtca 86  Q
    |||||||| |||||| ||||||||| |||||||||||||  ||||||| |||||    
T  8420071 taattacattgaattatgttattttttcaaattattagctatgtcggcgtgtca 8420018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 17593734 - 17593775
Alignment:
Q  30 atataattacactgaattctgttattttctcaaattattagc 71  Q
    ||||||||||||||||||  || |||||||||||||||||||    
T  17593734 atataattacactgaattacgtgattttctcaaattattagc 17593775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 19579745 - 19579688
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||| |||| |||| ||| ||||||||||||||||||| |||||||| | |||||||    
T  19579745 taattgcactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgt 19579688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 24273041 - 24273078
Alignment:
Q  29 catataattacactgaattctgttattttctcaaatta 66  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  24273041 catataattacactgaattatgtgattttctcaaatta 24273078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 24389173 - 24389136
Alignment:
Q  29 catataattacactgaattctgttattttctcaaatta 66  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  24389173 catataattacactgaattatgtgattttctcaaatta 24389136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 26312817 - 26312756
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||||||||||||||||   | |||||||||||||||| || || ||||||| |||||||    
T  26312817 catataattacactgaattaattgattttctcaaattatttgcggtatcggcatatcagtgt 26312756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 37328849 - 37328930
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 104  Q
    ||||| ||| ||||||||||||||| ||| |||||  ||||||||| || |||||||  | |||||||  ||||||||||||    
T  37328849 ccgacacatgtaattacactgaattttgtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtcgtgttcg 37328930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 39205928 - 39205879
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcg 78  Q
    |||||||||||||  |||| | | ||||||||||||||||||||||||||    
T  39205928 catataattacacctaattatatgattttctcaaattattagcagtgtcg 39205879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 40000555 - 40000616
Alignment:
Q  38 acactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 99  Q
    |||||||||| ||| ||||| |||||||||||  ||||||| |||||||||||  |||||||    
T  40000555 acactgaattatgtgattttttcaaattattaagagtgtcgacatgtcagtgtccgtgtcgt 40000616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 2436976 - 2436878
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc--gtgttcgtattcgtgcttcatag 120  Q
    ||||| |||||||| |||  ||||| ||| |||||  |||||||||||| |||||||| |||||||| | |||||  |||| ||||| ||||||||||||    
T  2436976 ccgacacatataatcacaacgaattatgtgatttttgcaaattattagcggtgtcggcgtgtcagtg-tcgtgtccggtgtccgtatccgtgcttcatag 2436878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 7997179 - 7997239
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtt 91  Q
    ||||||||||||| ||| | | ||||||||||||||||| | |||| ||| ||||||||||    
T  7997179 tataattacactgtattatatcattttctcaaattattatccgtgttggcgtgtcagtgtt 7997239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 19820429 - 19820477
Alignment:
Q  53 attttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||||||| |||||||  |||||||||  |||||||||    
T  19820429 attttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgt 19820477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 23221037 - 23220973
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcag 87  Q
    ||||| ||||| || ||||| |||| ||| ||||| ||||||||||||| |||||| ||||||||    
T  23221037 ccgacacatatgataacactaaattatgtgattttatcaaattattagcggtgtcgacatgtcag 23220973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 2e-20; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 120
Target Start/End: Complemental strand, 36878507 - 36878417
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgt-cgtgttcgtattcgtgcttcatag 120  Q
    ||||||||||||||||| ||| ||||||||||||||||||| |||||||| ||||||||| | ||| ||||| ||||| ||||||||||||    
T  36878507 tataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtctatgtccgtgtccgtatccgtgcttcatag 36878417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 5898271 - 5898368
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcatag 120  Q
    ||||| ||||||||||||||||||| ||| ||||| ||| ||||||||| |||||||| | ||||||| |||||| ||| ||||| |||||| |||||    
T  5898271 ccgacgcatataattacactgaattatgtgattttttcagattattagcggtgtcggcgtctcagtgtctgtgtcatgtccgtatccgtgctacatag 5898368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 19058871 - 19058959
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtc-agtgtttgtgtcgtgttcgtattcgtgcttcatag 120  Q
    ||||||||||||||| |||||| || | ||||||||||| |||||||| |||| ||||| |||||||||| ||||| ||||||||||||    
T  19058871 taattacactgaattatgttatctttttaaattattagctgtgtcggcgtgtcaagtgtgtgtgtcgtgtccgtatccgtgcttcatag 19058959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 27471581 - 27471669
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcataga 121  Q
    ||||||||||||||| |||  |||||||||||||||||| || ||||  ||||||||||||||||| || |||||  ||||||||||||    
T  27471581 taattacactgaattatgtgcttttctcaaattattagcggtatcggtgtgtcagtgtttgtgtcgcgtccgtatatgtgcttcataga 27471669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 14359537 - 14359623
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcatag 120  Q
    |||||||||| |||| ||| ||||| ||||||||||||| |||||||| |||| |||| |||||||||| ||||| ||||||||||||    
T  14359537 taattacactaaattatgtgatttt-tcaaattattagctgtgtcggcgtgtccgtgtctgtgtcgtgtccgtatccgtgcttcatag 14359623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 19562632 - 19562699
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgt 96  Q
    ||||||||||||||||| | ||  |||||||||||||||||||||||||||| |||||||||| ||||    
T  19562632 catataattacactgaactatgagattttctcaaattattagcagtgtcggcgtgtcagtgttcgtgt 19562699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 48450602 - 48450689
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcatag 120  Q
    |||||||||| |||| ||||||||| ||||||||||||| |||| ||| |||||||||  ||||||||| ||||| | ||||||||||    
T  48450602 taattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtccgtatccatgcttcatag 48450689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 398778 - 398848
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||||| ||| ||||| ||||||||||||| |||||||| |||||||||  |||||||||    
T  398778 tataattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgt 398848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 101
Target Start/End: Complemental strand, 9709874 - 9709796
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||| ||||||||||||  ||||| ||| ||||||||||||||||||| |||| |||||||||||||  |||||||||    
T  9709874 ccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgt 9709796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 31015116 - 31015031
Alignment:
Q  4 tgtcagacatgtgtcgtgcccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtg 89  Q
    ||||||||| |||||||| ||||| | | ||||||||||||||| ||| ||||||||||||||||||| |||| |||  |||||||    
T  31015116 tgtcagacacgtgtcgtgtccgacacttgtaattacactgaattatgtgattttctcaaattattagctgtgtaggcgcgtcagtg 31015031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 5376515 - 5376583
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||| ||||||||||| ||||||||||| |||||||| ||| |||||  |||||||||    
T  5376515 taattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgt 5376583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 13011230 - 13011302
Alignment:
Q  33 taattacactgaattctgttattttct-caaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 104  Q
    |||||||||| |||| ||| ||||| | |||||||||||| ||||||||||||||||||| ||||||||||||    
T  13011230 taattacacttaattatgtgatttttttcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgttcg 13011302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 15641042 - 15641102
Alignment:
Q  30 atataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||| |||||||||||  ||| ||||||| ||||||||||||||||||||||||||||||    
T  15641042 atatagttacactgaatcatgtgattttcttaaattattagcagtgtcggcatgtcagtgt 15641102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 40181919 - 40181871
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtc 77  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  40181919 catataattacactgaattatgtgattttctcaaattattagcagtgtc 40181871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 10572594 - 10572672
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||| ||| ||||||||| ||||| ||| ||||||||||||||||||  |||||||| ||||||||||  ||||||||    
T  10572594 ccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgttcatgtcgtgt 10572672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 17831537 - 17831603
Alignment:
Q  24 cgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||| ||||| ||||||||||||  ||| ||||||||||||||||||| |||||||| |||||||||    
T  17831537 cgacacatatgattacactgaataatgtgattttctcaaattattagcggtgtcggcgtgtcagtgt 17831603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 25452162 - 25452220
Alignment:
Q  32 ataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||||||||||||| ||  |||||||||||||||||||||||| |||||||| ||||    
T  25452162 ataattacactgaattatgagattttctcaaattattagcagtgttggcatgtcggtgt 25452220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 34712394 - 34712440
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtg 75  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||    
T  34712394 catataattacactaaattatgttattttctcaaattattagcagtg 34712440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 2896140 - 2896193
Alignment:
Q  37 tacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||| ||| ||||||||||||||||||| |||||||| |||||||||    
T  2896140 tacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgt 2896193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 3490405 - 3490462
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||  |||  ||||||||||||||||||||||||||| |||||||||    
T  3490405 taattacactgaataatgtagttttctcaaattattagcagtgtcggcgtgtcagtgt 3490462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 6427398 - 6427337
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||||||||| |||||| ||| ||||||||||||||||||| |||| ||| |||||||||    
T  6427398 catataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgt 6427337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 19324610 - 19324561
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcg 78  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  19324610 catataattacactgaattatgtgattttctcaaattatcagcagtgtcg 19324561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 1262928 - 1262860
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    |||||| | |||||| ||| ||||||||||||||||||| |||||||| |||| ||||| |||||||||    
T  1262928 taattatattgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgt 1262860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 1864885 - 1864941
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcgg 79  Q
    ||||| ||||||||||||||||||| ||| ||||||||||||||||| | |||||||    
T  1864885 ccgacacatataattacactgaattatgtgattttctcaaattattaactgtgtcgg 1864941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 7918222 - 7918294
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||||||| ||| ||||||||||||||||||   |||| || ||||| ||| ||||||||||    
T  7918222 catataattacactgaattatgtgattttctcaaattattagtgatgtcagcgtgtcattgtctgtgtcgtgt 7918294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 12443471 - 12443527
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtc 85  Q
    |||| |||||||||||||| ||| ||||||||||||||||||| |||||||| ||||    
T  12443471 catacaattacactgaattatgtgattttctcaaattattagctgtgtcggcgtgtc 12443527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 119
Target Start/End: Original strand, 23636054 - 23636150
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcata 119  Q
    ||||| |||| |||||||||||||| ||| ||||||||||||| || || || ||||| ||||| |||  ||||||||| |||||  ||||||||||    
T  23636054 ccgacacatacaattacactgaattatgtaattttctcaaatttttggcggtttcggcgtgtcaatgtccgtgtcgtgtgcgtatctgtgcttcata 23636150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 25098566 - 25098622
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtc 85  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||| |||||||| ||||    
T  25098566 catataattacactgaattatgtgattttctcaaattatcagcggtgtcggcttgtc 25098622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 26238129 - 26238173
Alignment:
Q  35 attacactgaattctgttattttctcaaattattagcagtgtcgg 79  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||    
T  26238129 attacactgaattatgttattttctcaaattattagcggtgtcgg 26238173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 41877485 - 41877553
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    |||||||||| |||| ||| ||||||||||||||||||| |||||||| |  |||||| ||||||||||    
T  41877485 taattacactaaattatgtaattttctcaaattattagcggtgtcggcgtaccagtgtctgtgtcgtgt 41877553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 13436506 - 13436455
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggc 80  Q
    ||||||||||||||||||| ||| |||| || ||||||||||||||||||||    
T  13436506 catataattacactgaattatgtgatttccttaaattattagcagtgtcggc 13436455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 104
Target Start/End: Original strand, 21366039 - 21366106
Alignment:
Q  37 tacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 104  Q
    ||||||||||| ||||||||| | ||||||||||| ||| |||| |||| ||||| ||||||||||||    
T  21366039 tacactgaattatgttattttttaaaattattagctgtgccggcgtgtcggtgttcgtgtcgtgttcg 21366106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 113343 - 113289
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcag 87  Q
    ||||||||||||||| ||| ||||| ||||||||||||| |||||||| ||||||    
T  113343 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 17754359 - 17754289
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 99  Q
    |||||| |||||||||||| ||| ||||| ||||||||||||| |||||||  |||||| || ||||||||    
T  17754359 catatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcagcgtctgtgtcgt 17754289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 34298482 - 34298412
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||||| ||| ||||||||||||||||||  |||||||  ||||||| |  |||||||||    
T  34298482 tataattacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgt 34298412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 51410069 - 51409980
Alignment:
Q  33 taattacactgaattctgttattttct-caaattattagcagtgtcggcatgtcagtgtttgtgt-cgtgttcgtattcgtgcttcataga 121  Q
    ||||||||||||||| ||| ||||| | |||||||||||  ||||||||||||| || ||||||| ||||| ||||| |||||||||||||    
T  51410069 taattacactgaattatgtgatttttttcaaattattagatgtgtcggcatgtccgt-tttgtgtccgtgtccgtatccgtgcttcataga 51409980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 1486722 - 1486779
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagt 88  Q
    ||||||||||||||||| ||| ||||| ||||||||||||| ||||| || |||||||    
T  1486722 tataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagt 1486779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 5944329 - 5944257
Alignment:
Q  31 tataattacactgaattctgttattttct--caaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||||| ||| ||||| |  |||||||||||| ||| |||| ||||||||| ||||||||||    
T  5944329 tataattacactgaattatgtgattttttttcaaattattagctgtggcggcgtgtcagtgtctgtgtcgtgt 5944257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 14332653 - 14332709
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtc 85  Q
    |||||||||||||| |||| ||| ||||||||||||||||||  |||| ||||||||    
T  14332653 catataattacactaaattatgtgattttctcaaattattagtggtgtgggcatgtc 14332709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 16927197 - 16927269
Alignment:
Q  30 atataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgtt 102  Q
    |||||||||||||||||| | | ||||| |||||||||||||  || || | ||||||||| |||||||||||    
T  16927197 atataattacactgaattatatgattttttcaaattattagctatgccgacgtgtcagtgtctgtgtcgtgtt 16927269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 30847731 - 30847787
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtc 85  Q
    ||||| |||||| |||||| ||| ||||| ||||||||||||||||||| |||||||    
T  30847731 catatgattacattgaattatgtcattttttcaaattattagcagtgtcagcatgtc 30847787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 38078676 - 38078740
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc 97  Q
    |||||||| |||||| ||| ||||| ||||||||||||| |||||| | |||||||||| |||||    
T  38078676 taattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgttcgtgtc 38078740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 38503374 - 38503318
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcgg 79  Q
    ||||| ||||||||||||||||| | | | ||||||||||||||||||| |||||||    
T  38503374 ccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcgg 38503318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 44482284 - 44482240
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattat 67  Q
    ||||| ||||||||||||||||||| ||| |||||||||||||||    
T  44482284 ccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 609482 - 609541
Alignment:
Q  42 tgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    |||||| ||| ||||||||||||||||||  |||||||| ||||||||||  ||||||||    
T  609482 tgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgttgatgtcgtgt 609541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 10577739 - 10577818
Alignment:
Q  22 cccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    |||||| ||||||||||||||| ||| ||| ||||||| |||  |||||| |||||||| |||| ||||  |||||||||    
T  10577739 cccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccgtgtcgtgt 10577818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 13997937 - 13997870
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||| ||||||||||||||||||| ||| ||||| | |||| |||| | |||||||| |||||||||    
T  13997937 ccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtcggcgtgtcagtgt 13997870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 20157355 - 20157410
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcg 78  Q
    ||||| ||||| ||||||||||||| ||| ||||||||| ||||||||| ||||||    
T  20157355 ccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtcg 20157410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 25361934 - 25361883
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggc 80  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||  ||||||||    
T  25361934 catataattacactgaattatgtgattttctcaaattatcagtggtgtcggc 25361883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 28273103 - 28273190
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcatag 120  Q
    ||||||||||||||| | | ||||| |||||| |||||  ||||| ||||||||||||   |||| ||| ||||| ||||||||||||    
T  28273103 taattacactgaattatatgattttttcaaatgattagttgtgtcagcatgtcagtgtccttgtcatgtccgtatccgtgcttcatag 28273190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 37598877 - 37598819
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||||| ||| ||||| ||||||||||||  |||||||| |||||||||    
T  37598877 tataattacactgaatt-tgtgattttttcaaattattagttgtgtcggcgtgtcagtgt 37598819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 38075975 - 38076030
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcg 78  Q
    ||||| ||||| |||||||||| || ||| |||| |||||||||||||||||||||    
T  38075975 ccgacacatatgattacactgacttatgtgatttactcaaattattagcagtgtcg 38076030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 9828098 - 9828036
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtc 85  Q
    ||||| |||| |||||||||||||| ||| ||||| ||||||||||||  |||||||| ||||    
T  9828098 ccgacacataaaattacactgaattatgtgattttatcaaattattagtggtgtcggcgtgtc 9828036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 20999630 - 20999588
Alignment:
Q  55 tttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc 97  Q
    ||||||||||||||| |||||||| ||| ||||||||||||||    
T  20999630 tttctcaaattattatcagtgtcgacatatcagtgtttgtgtc 20999588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 69
Target Start/End: Original strand, 24176380 - 24176418
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattatta 69  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  24176380 tataattacactgaatgatgttattttctcaaattatta 24176418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 34371767 - 34371714
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtc 77  Q
    ||||| ||||||||||||||||||| ||| |||||||| |||||||||| |||||    
T  34371767 ccgacacatataattacactgaattatgtgattttctc-aattattagcggtgtc 34371714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 119
Target Start/End: Complemental strand, 36906045 - 36905955
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcata 119  Q
    ||||||||||| ||||||| ||| ||||||||| ||||||||| |||| ||  |||||||||   || | ||| |||||| ||||||||||    
T  36906045 catataattactctgaattatgtgattttctcagattattagcggtgttggtgtgtcagtgtccttgacatgtccgtatttgtgcttcata 36905955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 69
Target Start/End: Original strand, 39101195 - 39101233
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattatta 69  Q
    |||||||||||| |||| |||||||||||||||||||||    
T  39101195 tataattacacttaattatgttattttctcaaattatta 39101233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 10233301 - 10233260
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattag 70  Q
    ||||||||||||||||||| ||| |||||||||| |||||||    
T  10233301 catataattacactgaattatgtgattttctcaatttattag 10233260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 22881631 - 22881688
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||||||| |||| ||| ||||| ||||||||||||  |||||||| |||||||||    
T  22881631 taattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgt 22881688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 31672910 - 31672967
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||||||||||||  || ||||| ||||||||||||| |||||||  |||||||||    
T  31672910 taattacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagtgt 31672967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 37055871 - 37055912
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagt 74  Q
    |||||||||| |||| ||| ||||||||||||||||||||||    
T  37055871 taattacactaaattatgtaattttctcaaattattagcagt 37055912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 39953151 - 39953208
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggc 80  Q
    ||||| |||| ||||||||| |||| ||| ||||||| ||||||||||| ||||||||    
T  39953151 ccgacacatacaattacactaaattatgtgattttctaaaattattagcggtgtcggc 39953208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 42359464 - 42359521
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||| ||| ||||| ||||||||||||  ||||| || |||||||||    
T  42359464 taattacactgaattttgtgattttttcaaattattagatgtgtcagcgtgtcagtgt 42359521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 46348398 - 46348455
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||||||| |||| | | ||||| ||||||||||||| |||||||| |||||||||    
T  46348398 taattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgt 46348455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 6612186 - 6612254
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||| ||| ||||| ||||||||||| | || ||||| ||||| |||  |||||||||    
T  6612186 taattacactgaattatgtaattttttcaaattattaactgtatcggcgtgtcattgtccgtgtcgtgt 6612254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 35702629 - 35702691
Alignment:
Q  59 tcaaattattagcagtgtcggcatgtcagtgtttgtgtc--gtgttcgtattcgtgcttcatag 120  Q
    ||||||||||||| ||||||||||||||||| | |||||  |||| ||||| ||||||||||||    
T  35702629 tcaaattattagctgtgtcggcatgtcagtg-tcgtgtccggtgtccgtatccgtgcttcatag 35702691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 40747786 - 40747834
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcgg 79  Q
    |||||||||| |||||| ||| ||||||||||||||||| | |||||||    
T  40747786 tataattacattgaattatgtcattttctcaaattattatccgtgtcgg 40747834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 47989541 - 47989474
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||| ||| ||||| | |||||||||   |||||||| ||||||||| ||||||||||    
T  47989541 taattacactgaattatgtgatttttttaaattatta-ttgtgtcggcgtgtcagtgtctgtgtcgtgt 47989474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 9e-20; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 26492182 - 26492307
Alignment:
Q  1 tggtgtcagacatgtgtcgtgcccgaccc--ata----taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgt 94  Q
    ||||||||||||||||||||| ||||| |  |||    ||||||||||||||| | | ||||| |||||||||||||  ||||||| |||||||||  ||    
T  26492182 tggtgtcagacatgtgtcgtgtccgacaccgatacttgtaattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgt 26492281  T
Q  95 gtcgtgttcgtattcgtgcttcatag 120  Q
    ||||||| ||||||||||||||||||    
T  26492282 gtcgtgtccgtattcgtgcttcatag 26492307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 101
Target Start/End: Complemental strand, 25093556 - 25093478
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||| ||||||||||||||||||| ||| |||||||||||| |||| |||||||||| ||| |||||  |||||||||    
T  25093556 ccgacacatataattacactgaattgtgtgattttctcaaatcattaacagtgtcggcgtgttagtgtcagtgtcgtgt 25093478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 16000034 - 16000102
Alignment:
Q  36 ttacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 104  Q
    |||||||||||| ||||||||| | ||||||||||  |||||||| ||||||||| |||||||||||||    
T  16000034 ttacactgaattatgttatttttttaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgttcg 16000102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 32804529 - 32804608
Alignment:
Q  9 gacatgtgtcgtgcccga--cccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtca 86  Q
    ||||||||||||| ||||  | |||||||||||||| |||| ||| ||||||||||||||||| | ||||||||||||||    
T  32804529 gacatgtgtcgtgtccgagacacatataattacactaaattatgtgattttctcaaattattaacggtgtcggcatgtca 32804608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 25948900 - 25948959
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||||| ||| ||||| ||||||||||||| || |||||||||||||||    
T  25948900 tataattacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagtgt 25948959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 120
Target Start/End: Complemental strand, 26508154 - 26508067
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcatag 120  Q
    ||||||||||||||| ||| ||||| ||||||||||||| ||||| || ||||||| | ||| |||||| ||||| ||| ||||||||    
T  26508154 taattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatctgtatcgtgtccgtatccgttcttcatag 26508067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 4987306 - 4987364
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtt 91  Q
    ||||||||||||||| ||| ||||| ||||||||||||| |||||||| ||||||||||    
T  4987306 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtt 4987364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 8383303 - 8383233
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||||| | | ||||||||||||||||||| |||||||| ||||| |||  |||||||||    
T  8383303 tataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgt 8383233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 11313811 - 11313861
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcgg 79  Q
    |||||||||||||| |||| ||| |||||||||||||||||||||||||||    
T  11313811 catataattacactaaattatgtgattttctcaaattattagcagtgtcgg 11313861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 120
Target Start/End: Complemental strand, 14979224 - 14979138
Alignment:
Q  34 aattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcatag 120  Q
    |||||||||||||| ||| ||||| ||||||||||||| |||||||| || || |||   |||||||| ||||| ||||||||||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgccattgtccttgtcgtgtccgtatccgtgcttcatag 14979138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 16192761 - 16192811
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcgg 79  Q
    ||||||||||||||||||| ||||||||||||||||||||| | |||||||    
T  16192761 catataattacactgaattatgttattttctcaaattattaacggtgtcgg 16192811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 24205054 - 24205124
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||| ||| ||| ||||||||||||||||| | |||||||| |||||||||  |||||||||    
T  24205054 tataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgt 24205124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 30994895 - 30994965
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||||| ||| ||||||| ||||||||||||||||   | ||||| ||||||||||||||    
T  30994895 tataattacactgaattgtgtgattttcttaaattattagcagtgtgaacgtgtcaatgtttgtgtcgtgt 30994965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 21479162 - 21479105
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||| ||| ||||| ||||||||||||| |||||||| |||||||||    
T  21479162 taattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 21479105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 7928504 - 7928448
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcgg 79  Q
    ||||| ||||||||||||||||||| ||| ||||| ||||||||||||| |||||||    
T  7928504 ccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcgg 7928448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 9624689 - 9624641
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtc 77  Q
    |||||||||||| |||||| ||| |||||||||||||||||||||||||    
T  9624689 catataattacattgaattatgtgattttctcaaattattagcagtgtc 9624641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 10954994 - 10954911
Alignment:
Q  35 attacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc--gtgttcgtattcgtgcttc 116  Q
    ||||||||||||| ||| ||||| ||||||||||||  |||||||| |||||||||| |||||  |||| ||||| ||||||||    
T  10954994 attacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgttcgtgtccggtgtccgtatccgtgcttc 10954911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 4990982 - 4991053
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 104  Q
    ||||||||||||||| ||| ||||||||||| ||||||| |||||||  ||||||| |  ||||||||||||    
T  4990982 taattacactgaattatgtaattttctcaaactattagcggtgtcggagtgtcagtctccgtgtcgtgttcg 4991053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 8039840 - 8039903
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtca 86  Q
    ||||| ||||||||||||||||||| | | ||||||||||||||||||| |||| ||| |||||    
T  8039840 ccgacacatataattacactgaattatataattttctcaaattattagcggtgttggcgtgtca 8039903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 119
Target Start/End: Original strand, 8789555 - 8789652
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc--gtgttcgtattcgtgcttcata 119  Q
    ||||| ||||||||||||| ||||| ||| ||||||||||||||| ||| |||||||  |||| ||| |||||||  |||| ||||| |||||||||||    
T  8789555 ccgacacatataattacacggaattatgtgattttctcaaattataagccgtgtcggtgtgtctgtg-ttgtgtccggtgtccgtatccgtgcttcata 8789652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 9800083 - 9800016
Alignment:
Q  34 aattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    |||||||| ||||| ||| ||||||||||||||||||  |||||||| |||||||||  |||||||||    
T  9800083 aattacacggaattatgtaattttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgt 9800016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 28678357 - 28678278
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgtt 102  Q
    ||||| |||| ||||| ||| |||| ||| ||||| | ||||||||||||| |||||||||||||||| | |||||||||    
T  28678357 ccgacacatacaattatactaaattatgtgattttattaaattattagcagcgtcggcatgtcagtgtctatgtcgtgtt 28678278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 101
Target Start/End: Complemental strand, 11665998 - 11665920
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||| |||||||||||||| |||| ||| ||||| |||||||||||||  ||||||  ||| ||||| ||||||||||    
T  11665998 ccgacacatataattacactaaattgtgtgattttatcaaattattagcgttgtcggtgtgttagtgtgtgtgtcgtgt 11665920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 2731860 - 2731790
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    |||||||||||||| |||| ||| ||||||| ||| |||||  ||| ||||||||||||||| ||||||||||    
T  2731860 catataattacacttaattatgtgattttcttaaagtatta--agtatcggcatgtcagtgtatgtgtcgtgt 2731790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 5441045 - 5441114
Alignment:
Q  32 ataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    |||||| || |||||| ||| ||||||||||||| ||||| ||| |||| ||||||||| ||||||||||    
T  5441045 ataattccattgaattatgtgattttctcaaatttttagcggtgacggcgtgtcagtgtctgtgtcgtgt 5441114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 11252023 - 11251978
Alignment:
Q  32 ataattacactgaattctgttattttctcaaattattagcagtgtc 77  Q
    |||||||||||||||| ||| |||||||||||||||||||| ||||    
T  11252023 ataattacactgaattatgtgattttctcaaattattagcaatgtc 11251978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 25064954 - 25064885
Alignment:
Q  32 ataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||| |||| ||| ||||| |||||| |||||| |||||||| ||||| ||| ||||||||||    
T  25064954 ataattacactaaattatgtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgt 25064885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 27277852 - 27277897
Alignment:
Q  32 ataattacactgaattctgttattttctcaaattattagcagtgtc 77  Q
    ||||||||||| |||| ||| |||||||||||||||||||||||||    
T  27277852 ataattacactaaattatgtgattttctcaaattattagcagtgtc 27277897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 3610677 - 3610609
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    |||||||||||| || ||||||||| | ||||||||| | |||| ||| ||||||||| ||||||||||    
T  3610677 taattacactgagttatgttatttttttaaattattaactgtgttggcgtgtcagtgtctgtgtcgtgt 3610609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 12704055 - 12703999
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtc 85  Q
    ||||||||||||||||||| |||  |||||||||||||||||  |||||||| ||||    
T  12704055 catataattacactgaattatgtgcttttctcaaattattagtggtgtcggcgtgtc 12703999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 20691373 - 20691305
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtt 91  Q
    ||||| ||||| ||||||||||||| ||| ||||||||||||||||| |||| ||  | ||||||||||    
T  20691373 ccgacacatatgattacactgaattatgtcattttctcaaattattatcagtttctacgtgtcagtgtt 20691305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 28918045 - 28917977
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||| ||| ||||| |||||||||||||  ||||||| ||||||| |  |||||||||    
T  28918045 taattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgt 28917977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 49651801 - 49651853
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtc 85  Q
    |||||||| |||||| ||| ||||| ||||||||||||| |||||||||||||    
T  49651801 taattacagtgaattatgtgattttttcaaattattagccgtgtcggcatgtc 49651853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 10690274 - 10690321
Alignment:
Q  30 atataattacactgaattctgttattttctcaaattattagcagtgtc 77  Q
    |||||||||||||||||| ||| ||||||||| ||||||||| |||||    
T  10690274 atataattacactgaattatgtgattttctcagattattagcggtgtc 10690321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 1438852 - 1438765
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcatagaa 122  Q
    |||||||||| |||||||| ||| ||||||||||||| |||||  ||||||  |||||      ||||||||| | ||||||||||||||||||    
T  1438852 catataattatactgaattatgtgattttctcaaattgttagcgatgtcggtgtgtca------gtgtcgtgtccatattcgtgcttcatagaa 1438765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 85
Target Start/End: Complemental strand, 1830385 - 1830335
Alignment:
Q  35 attacactgaattctgttattttctcaaattattagcagtgtcggcatgtc 85  Q
    ||||||||||||| ||| ||||||| |||||||||  ||||||||||||||    
T  1830385 attacactgaattatgtcattttcttaaattattaaaagtgtcggcatgtc 1830335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 5407260 - 5407314
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtc 85  Q
    |||||||||| |||||| ||| ||||||||||||| ||||| |||||||| ||||    
T  5407260 tataattacaatgaattatgtgattttctcaaatttttagcggtgtcggcgtgtc 5407314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 11493371 - 11493413
Alignment:
Q  28 ccatataattacactgaattctgttattttctcaaattattag 70  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||    
T  11493371 ccatataattacactgaattatgtgattttctcacattattag 11493413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 16789668 - 16789714
Alignment:
Q  36 ttacactgaattctgttattttctcaaattattagcagtgtcggcat 82  Q
    |||||||||||| ||| ||||||||||||||||| | ||||||||||    
T  16789668 ttacactgaattatgtcattttctcaaattattatctgtgtcggcat 16789714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 24633811 - 24633757
Alignment:
Q  32 ataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtca 86  Q
    |||||| ||| ||||| ||| ||||||||||||||||||  ||||||||||||||    
T  24633811 ataattgcaccgaattatgtgattttctcaaattattagtggtgtcggcatgtca 24633757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 34307793 - 34307839
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtc 77  Q
    ||||||||||||||| | ||| ||||||||||||||||||| |||||    
T  34307793 tataattacactgaaatatgtgattttctcaaattattagcggtgtc 34307839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 49505165 - 49505207
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagc 71  Q
    |||||||||||||| |||| ||| |||||||||||||||||||    
T  49505165 catataattacactaaattatgtgattttctcaaattattagc 49505207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 90
Target Start/End: Original strand, 6525715 - 6525752
Alignment:
Q  53 attttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  6525715 attttctcaaattattagcggtgtcgacatgtcagtgt 6525752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 10268501 - 10268558
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||||||| |||| ||| ||||| ||||||||||| | |||||||| |||||||||    
T  10268501 taattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgt 10268558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 11658868 - 11658791
Alignment:
Q  24 cgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    |||| |||||||| |||||||||| ||  ||||||||||||||||| |  ||| ||  ||||||||| ||||||||||    
T  11658868 cgacacatataatcacactgaattatgcgattttctcaaattattaacgatgttggtgtgtcagtgtctgtgtcgtgt 11658791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 15812832 - 15812893
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||||||||||||| || ||| |||||||||||||||| || | ||| ||||| ||||||    
T  15812832 catataattacactgagttatgtgattttctcaaattatttgcggcgtcagcatgccagtgt 15812893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 20503509 - 20503452
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||| ||| ||||| |||||||||| |  |||||||| |||||||||    
T  20503509 taattacactgaattatgtcattttttcaaattatttgttgtgtcggcgtgtcagtgt 20503452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 34185138 - 34185191
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtca 86  Q
    ||||||||||||||| ||| ||||| | ||||||||||| |||||||| |||||    
T  34185138 taattacactgaattgtgtgattttttgaaattattagccgtgtcggcgtgtca 34185191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 35994753 - 35994805
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtca 86  Q
    ||||||||||||||| ||| ||||| ||||||||||||| |||||||| |||||    
T  35994753 taattacactgaattatgtgatttt-tcaaattattagctgtgtcggcttgtca 35994805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 45451607 - 45451554
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgt 76  Q
    ||||| ||||| |||| |||||| | ||| ||||||||||||||||||||||||    
T  45451607 ccgacacatattattatactgaagtatgtgattttctcaaattattagcagtgt 45451554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 10455838 - 10455766
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    |||||||||||||| | || | | ||||||||| |||||||||||||| ||| ||||| ||  ||||||||||    
T  10455838 catataattacacttagttatatgattttctcatattattagcagtgttggcgtgtcaatgcctgtgtcgtgt 10455766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 12674536 - 12674584
Alignment:
Q  53 attttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    |||||||||||||||||||||||||||  ||||| |||  |||||||||    
T  12674536 attttctcaaattattagcagtgtcggtgtgtcaatgtccgtgtcgtgt 12674584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 14829733 - 14829670
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc 97  Q
    |||||||  |||||| ||| ||||| ||||||||||||| |||||||| ||||||||| ||||||    
T  14829733 taattaccatgaattatgtgatttt-tcaaattattagctgtgtcggcgtgtcagtgtctgtgtc 14829670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 15796309 - 15796377
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||| | | ||||| ||||||||||| | |||||||| ||||| |||  |||||||||    
T  15796309 taattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgt 15796377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 21720807 - 21720751
Alignment:
Q  34 aattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||||||||||| ||  || |||||||||||||| | |||||||| |||||||||    
T  21720807 aattacactgaattatgagatattctcaaattattatcggtgtcggcgtgtcagtgt 21720751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 34910361 - 34910309
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtc 85  Q
    ||||||||||||||| ||| ||||| ||||||||||||  |||||||| ||||    
T  34910361 taattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtc 34910309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 40052367 - 40052319
Alignment:
Q  42 tgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||| ||| ||||| ||||||||||||| |||||||| |||||||||    
T  40052367 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 40052319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 119
Target Start/End: Complemental strand, 29776084 - 29775994
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcata 119  Q
    |||||||||| ||||||||  || |||||||||||||||||||||||||| | ||||| |||  ||||||||  |||||||||||||||||    
T  29776084 catataattatactgaattacgtgattttctcaaattattagcagtgtcgacttgtcaatgtccgtgtcgtgaccgtattcgtgcttcata 29775994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 13844601 - 13844668
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||| |||||||||||||| |||| ||| |||||||||||||||||||||||||||| |||| ||||    
T  13844601 ccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtgt 13844668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 22596038 - 22595949
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc--gtgttcgtattcgtgcttcataga 121  Q
    ||||||||||||||| ||||||||| | ||||||||||| |||||||| |||||||| |||||||  |||| ||||| |||||||||||||    
T  22596038 taattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtg-ttgtgtccggtgtccgtatccgtgcttcataga 22595949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 4611582 - 4611532
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcgg 79  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  4611582 catataattacactgaattatgttattttctcaaattattagcggtgtcgg 4611532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 119
Target Start/End: Complemental strand, 20873113 - 20873027
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcata 119  Q
    |||||||||| |||| ||| ||||| ||||||||||| |  ||||||| |||||||||  ||||||||| |||||||||||||||||    
T  20873113 taattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgtccgtattcgtgcttcata 20873027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 24362213 - 24362283
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 99  Q
    ||||||||||||||||||| ||| ||| ||||||||||||||| |||||||| |||| |||| ||||||||    
T  24362213 catataattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtcgt 24362283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 31236582 - 31236644
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtc 85  Q
    ||||| |||||||||||| |||||| ||| |||||||||||||||||||||||||||| ||||    
T  31236582 ccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtgtc 31236644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 27213601 - 27213539
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtc 85  Q
    ||||| |||||||||||| |||||| ||| ||||||| |||||||||||||||||||| ||||    
T  27213601 ccgacacatataattacagtgaattatgtgattttctgaaattattagcagtgtcggcgtgtc 27213539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 34897138 - 34897084
Alignment:
Q  24 cgacccatataattacactgaattctgttattttctcaaattattagcagtgtcg 78  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  34897138 cgacacatataattacactgaattatgtgattttctcaaattattagcggtgtcg 34897084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 11803307 - 11803234
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgtt 102  Q
    ||||||||||||||||||| ||| ||||||| ||||||||| ||||||| |  | |||||||| ||||||||||    
T  11803307 catataattacactgaattatgtgattttcttaaattattaacagtgtcagtgtatcagtgttcgtgtcgtgtt 11803234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 11927091 - 11927148
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggc 80  Q
    ||||| ||||||||||||||||||| ||| ||||| ||||||||||| ||||||||||    
T  11927091 ccgacacatataattacactgaattatgtgattttatcaaattattaacagtgtcggc 11927148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 36450769 - 36450826
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||||||| ||||| ||||||||||||  |||||||| |||||||||    
T  36450769 taattacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtcagtgt 36450826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 39954290 - 39954351
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||||||||||| |||| ||| ||||||||||||||||||| |||||||| |||| ||||    
T  39954290 catataattacactaaattatgtgattttctcaaattattagcggtgtcggcgtgtcggtgt 39954351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 4673440 - 4673508
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||| | | ||||| ||||||||||| | |||||||| ||||||||| ||||||||||    
T  4673440 taattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgt 4673508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 14731760 - 14731712
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtc 77  Q
    |||||||||||||| |||| ||| |||||||||||||||||||||||||    
T  14731760 catataattacactaaattatgtgattttctcaaattattagcagtgtc 14731712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 24669477 - 24669409
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||| ||| |||| |||||||||||| | ||||| || ||||||||| ||||||||||    
T  24669477 taattacactgaattatgtaatttcctcaaattattaacggtgtcagcgtgtcagtgtctgtgtcgtgt 24669409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 29510319 - 29510387
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    |||||| |||||||| ||| ||||| ||||||||||||| |||||||| |||||||||  |||||||||    
T  29510319 taattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 29510387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 4786343 - 4786410
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||| ||||||||||||||||||| ||| ||||||| |||||||||   |||||||| |||||||||    
T  4786343 ccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagtgt 4786410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 12606834 - 12606889
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcg 78  Q
    ||||| |||||||||||| |||||| | | ||||||||||||||||||||||||||    
T  12606834 ccgacacatataattacattgaattatatgattttctcaaattattagcagtgtcg 12606889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 13203688 - 13203617
Alignment:
Q  30 atataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    |||||||||||||||||| ||| ||||||||||||||||||   ||| | | | ||||||||||||||||||    
T  13203688 atataattacactgaattatgtaattttctcaaattattagtgttgttgacgtatcagtgtttgtgtcgtgt 13203617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 20679408 - 20679467
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||| | ||| ||||||||||||||||||  |||||| |||||||||||    
T  20679408 tataattacactgaactatgtgattttctcaaattattaggggtgtcgacatgtcagtgt 20679467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 44067562 - 44067503
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||| ||| ||| ||||||||||||||||| | |||||||| |||||||||    
T  44067562 tataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgt 44067503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 7658510 - 7658460
Alignment:
Q  30 atataattacactgaattctgttattttctcaaattattagcagtgtcggc 80  Q
    |||||||||||||||||| ||| ||||||||||||||||||  ||||||||    
T  7658510 atataattacactgaattatgtaattttctcaaattattagtggtgtcggc 7658460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 37283824 - 37283882
Alignment:
Q  32 ataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||||||||||||| ||| ||||||||| ||||||||| ||| | ||||||||||||    
T  37283824 ataattacactgaattatgtgattttctcagattattagcggtgcccgcatgtcagtgt 37283882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 3025597 - 3025556
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagca 72  Q
    ||||||||||||||||| ||| ||||||||||||||||||||    
T  3025597 tataattacactgaattatgtgattttctcaaattattagca 3025556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 11944719 - 11944662
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggc 80  Q
    ||||| |||||||||||||||| || ||| ||||| ||||||||||| ||||||||||    
T  11944719 ccgacacatataattacactgagttatgtgattttatcaaattattaacagtgtcggc 11944662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 14134746 - 14134706
Alignment:
Q  30 atataattacactgaattctgttattttctcaaattattag 70  Q
    |||||||||||||||||| ||| ||||||||||||||||||    
T  14134746 atataattacactgaattatgtgattttctcaaattattag 14134706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 22652020 - 22651952
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    |||||| | |||||| ||| ||||| ||||||||||||| |||||||| |||||||||  |||||||||    
T  22652020 taattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 22651952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 28384999 - 28385079
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttc 103  Q
    ||||| ||||||||||||||||||| ||  ||||  ||| ||||||| | ||||||| ||||||||||  |||||||||||    
T  28384999 ccgacacatataattacactgaattatgagatttattcatattattaacggtgtcggtatgtcagtgtccgtgtcgtgttc 28385079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 40332235 - 40332191
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtc 77  Q
    ||||||||||||||| ||| |||||||||||||||| ||||||||    
T  40332235 taattacactgaattatgtgattttctcaaattatttgcagtgtc 40332191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 8798842 - 8798889
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgt 76  Q
    |||||||||| | |||||| ||||||||||||||||||||| ||||||    
T  8798842 catataattatattgaattatgttattttctcaaattattaacagtgt 8798889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 15816142 - 15816201
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||||||||| |||| ||| ||||| ||||||||||||  |||||||| |||||||||    
T  15816142 tataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgt 15816201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 25192360 - 25192419
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||||| |||||||| ||| | ||| ||||||||||||| |||||||| |||||||||    
T  25192360 tataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgt 25192419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 41831958 - 41832013
Alignment:
Q  36 ttacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtt 91  Q
    |||||||||||| ||| ||||| ||||||||||| | ||||||||||||| |||||    
T  41831958 ttacactgaattatgtgattttttcaaattattaactgtgtcggcatgtctgtgtt 41832013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 926801 - 926871
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    |||||||||||||||   ||  |||||||||||||||||| ||||| ||| |||||||||  |||||||||    
T  926801 tataattacactgaacaatgagattttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgt 926871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 120
Target Start/End: Original strand, 27067323 - 27067403
Alignment:
Q  43 gaattctgttattttctcaaattattagcagtgtcggca---tgtcagtgtttgtgtcgtgttcgtattcgtgcttcatag 120  Q
    ||||| ||| |||||||||||| |||||  |||||||||   ||||||||  |||||||||| ||||| ||||||||||||    
T  27067323 gaattatgtaattttctcaaatcattagtggtgtcggcagtgtgtcagtgactgtgtcgtgtccgtatccgtgcttcatag 27067403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 7442889 - 7442832
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||| ||| ||||| | ||||||||||| |||| ||||||| |||||    
T  7442889 taattacactgaattatgtaattttatgaaattattagcggtgttggcatgttagtgt 7442832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 12570514 - 12570567
Alignment:
Q  24 cgacccatataattacactgaattctgttattttctcaaattattagcagtgtc 77  Q
    |||| |||||||||||||| |||| |||  |||||| |||||||||||||||||    
T  12570514 cgacacatataattacacttaattatgtgtttttcttaaattattagcagtgtc 12570567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 18407763 - 18407706
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||| ||| ||||| |  |||||||||| ||||||||||||| ||||    
T  18407763 taattacactgaattatgtgatttttttgaattattagctgtgtcggcatgtctgtgt 18407706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 25172703 - 25172768
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagt 88  Q
    ||||| |||||||||||| | || | ||| ||||| ||||||||||||||||||| |||| |||||    
T  25172703 ccgacacatataattacattaaaatatgtaattttatcaaattattagcagtgtcagcatatcagt 25172768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 30271306 - 30271363
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||| ||| ||| ||||| |||||| |||||| |||||||| |||||||||    
T  30271306 taattacactgcattatgtgattttttcaaatgattagctgtgtcggcgtgtcagtgt 30271363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 31109529 - 31109590
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||| ||| |||||||| | | ||||||||||||||||| | |||||||| |||||||||    
T  31109529 catatagttagactgaattgtttgattttctcaaattattaacggtgtcggcgtgtcagtgt 31109590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 36934718 - 36934645
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgtt 102  Q
    |||||||||||| |||||| ||| ||||| || |||||||||| |||||| | ||| |||||  ||||||||||    
T  36934718 catataattacaatgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtgtcgtgtt 36934645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 3508100 - 3508060
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattatta 69  Q
    ||||| |||||| |||||| |||||||||||||||||||||    
T  3508100 catatgattacattgaattatgttattttctcaaattatta 3508060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 13436988 - 13437036
Alignment:
Q  42 tgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||| ||| ||||| ||||||||||||| |||||||| |||||||||    
T  13436988 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 13437036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 22197757 - 22197825
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    |||||||||| |||| ||| | ||| ||||||||||||| |||| ||| ||| ||||| ||||||||||    
T  22197757 taattacactaaattatgtgaatttttcaaattattagctgtgttggcgtgttagtgtctgtgtcgtgt 22197825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 25566885 - 25566841
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtc 77  Q
    ||||||||||||||| ||| ||||| ||||||||||||| |||||    
T  25566885 taattacactgaattatgtgattttttcaaattattagctgtgtc 25566841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 31557040 - 31556985
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtg 89  Q
    ||||||||||||||| ||| ||||| ||||||||||| | |||||||| ||||||||    
T  31557040 taattacactgaattatgtgatttt-tcaaattattaactgtgtcggcgtgtcagtg 31556985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 34201057 - 34201097
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattatta 69  Q
    |||||||||||| |||||| ||| |||||||||||||||||    
T  34201057 catataattacattgaattatgtcattttctcaaattatta 34201097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 37225754 - 37225794
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattatta 69  Q
    ||||| |||||| |||||| |||||||||||||||||||||    
T  37225754 catatgattacattgaattatgttattttctcaaattatta 37225794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 21945547 - 21945458
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttc-gtattcgtgcttcataga 121  Q
    ||||||||||||||| ||| ||||| ||||||||||||| |||||||||||||||||| |||||| ||| | || | |||||||||||||    
T  21945547 taattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtctgtgtcatgtccggtgtccgtgcttcataga 21945458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 40613516 - 40613441
Alignment:
Q  11 catgtgtcgtgcccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtca 86  Q
    ||||||| ||| ||||| ||||||||||||||||||| ||| ||||||||||| ||||||| |||||||| |||||    
T  40613516 catgtgttgtgtccgacacatataattacactgaattatgtgattttctcaaaatattagcggtgtcggcgtgtca 40613441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 16402224 - 16402294
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||| ||  ||||||||||||||||||||| | |||||||||||||||||||  ||||||||    
T  16402224 tataattacactgtatcatgttattttctcaaattattatccgtgtcggcatgtcagtgttcatgtcgtgt 16402294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 14126124 - 14126194
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||||| ||| | ||| ||||||||||| |||||||||| ||| ||||| ||||||||||    
T  14126124 tataattacactgaattatgtgactttatcaaattattaacagtgtcggcgtgttagtgtctgtgtcgtgt 14126194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 35723395 - 35723457
Alignment:
Q  29 catataattacactgaattctgt-tattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||||||||| |||||| ||| |||||||||||||||||||| |||||||| |||||||||    
T  35723395 catataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcagtgt 35723457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 15029813 - 15029752
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||||||| ||| || || ||||||||||||||||||| || |||||||||    
T  15029813 catataattacactgaattatgtgatattttcaaattattagcagtgtctgcgtgtcagtgt 15029752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 36635372 - 36635311
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||||||| ||| ||||||||||||||||||  |||| ||| |||||||||    
T  36635372 catataattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgt 36635311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 3947781 - 3947849
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||| ||  ||||| ||||||||||||| ||||||||||||| |||| ||||| ||||    
T  3947781 taattacactgaattatgcgattttttcaaattattagctgtgtcggcatgtccgtgtctgtgtggtgt 3947849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 8423731 - 8423779
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcgg 79  Q
    ||||||||||||||||| ||| ||||||||||||||||||| |||||||    
T  8423731 tataattacactgaattatgtgattttctcaaattattagcggtgtcgg 8423779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 20743295 - 20743351
Alignment:
Q  35 attacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtt 91  Q
    ||||||||||||| ||| ||||||||||||||||| | |||||||| ||||||||||    
T  20743295 attacactgaattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtt 20743351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 32910596 - 32910537
Alignment:
Q  32 ataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtt 91  Q
    |||||||||||||||| ||| ||||||||||||||||| | ||||||| ||||| |||||    
T  32910596 ataattacactgaattatgtcattttctcaaattattatccgtgtcggtatgtcggtgtt 32910537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 24343553 - 24343499
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtc 85  Q
    ||||||||||||||||| ||| ||||||||||||||||| | |||||||| ||||    
T  24343553 tataattacactgaattatgtaattttctcaaattattatccgtgtcggcgtgtc 24343499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 101
Target Start/End: Complemental strand, 28720894 - 28720852
Alignment:
Q  59 tcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||| ||||||||||||||||||| |||||||||    
T  28720894 tcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgt 28720852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 903970 - 903909
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||||||| ||| ||||||||||||||||| | ||| |||  |||||||||    
T  903970 catataattacactgaattatgtgattttctcaaattattaacggtgccggtgtgtcagtgt 903909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 13783329 - 13783268
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||||||| ||| || ||||||||| |||||| |||||||  |||||||||    
T  13783329 catataattacactgaattttgtgatcttctcaaataattagcggtgtcggtgtgtcagtgt 13783268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 21539879 - 21539976
Alignment:
Q  30 atataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt-----ttgtgt-cgtgttcgtattcgtgcttcataga 121  Q
    ||||||||||||| |||| | | ||||||| |||||||||   ||||||||||||||||||     |||||| ||||||||||| |||||||||||||    
T  21539879 atataattacactaaattatatgattttcttaaattattaatggtgtcggcatgtcagtgtctatgttgtgtccgtgttcgtatacgtgcttcataga 21539976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 22440611 - 22440660
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcg 78  Q
    ||||||||||||||||||| ||| ||||||||||||||||| | ||||||    
T  22440611 catataattacactgaattatgtgattttctcaaattattaacggtgtcg 22440660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 49431070 - 49430981
Alignment:
Q  33 taattacactgaattctgttattttct-caaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcataga 121  Q
    ||||||||||||||| ||| ||||| | |||||||||||| |||||||| ||||| |||  | ||||||| ||| | |||||||||||||    
T  49431070 taattacactgaattatgtgatttttttcaaattattagctgtgtcggcgtgtcactgtccgagtcgtgtccgtgtccgtgcttcataga 49430981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 56257978 - 56257933
Alignment:
Q  32 ataattacactgaattctgttattttctcaaattattagcagtgtc 77  Q
    |||||||||||||||| | | |||||||||||||||||||||||||    
T  56257978 ataattacactgaattatatgattttctcaaattattagcagtgtc 56257933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 847995 - 847927
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    |||||| | |||||| ||| ||||||||||||||||||| |  ||||| ||||||||| ||||||||||    
T  847995 taattatagtgaattatgtaattttctcaaattattagcggcatcggcgtgtcagtgtctgtgtcgtgt 847927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 5832729 - 5832777
Alignment:
Q  53 attttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    |||||||||||||||||||||||||| | ||| | ||||||||||||||    
T  5832729 attttctcaaattattagcagtgtcgacgtgttaatgtttgtgtcgtgt 5832777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 13134503 - 13134447
Alignment:
Q  24 cgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggc 80  Q
    |||| |||||||||||||| |||| ||| ||||||| ||||||| ||||||||||||    
T  13134503 cgacacatataattacactaaattatgtgattttcttaaattataagcagtgtcggc 13134447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 19482712 - 19482644
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||| ||||| ||| || || ||||||||||||  |||||||| ||||||||| ||||||||||    
T  19482712 taattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgt 19482644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 23293001 - 23293069
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    |||||| |||||||| ||| ||||| ||||||||||||| |||||||| ||||| |||  |||||||||    
T  23293001 taattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgt 23293069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 7214504 - 7214574
Alignment:
Q  2 ggtgtcagacatgtgtcgtgcc--cgacccatataattacactgaattctgttattttctcaaattattag 70  Q
    |||||| ||||||||||||| |  |||| |||||||||||| | |||| ||| ||||||||||||||||||    
T  7214504 ggtgtcggacatgtgtcgtgacaccgacgcatataattacattaaattatgtgattttctcaaattattag 7214574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 15659771 - 15659818
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgt 76  Q
    ||||||||||||| ||||| ||  ||||||||||||||||||||||||    
T  15659771 catataattacaccgaattatgagattttctcaaattattagcagtgt 15659818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 26504304 - 26504359
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcg 78  Q
    ||||| ||||||||||||||||| | | | ||||||| ||||||||||||||||||    
T  26504304 ccgacacatataattacactgaactatttgattttcttaaattattagcagtgtcg 26504359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 105
Target Start/End: Original strand, 31638068 - 31638119
Alignment:
Q  54 ttttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgt 105  Q
    ||||||||||||||||||   |||||||| ||||| ||||||||||||||||    
T  31638068 ttttctcaaattattagcgtcgtcggcatatcagtatttgtgtcgtgttcgt 31638119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 46180947 - 46180986
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattatt 68  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  46180947 catatgattacactgaattatgttattttctcaaattatt 46180986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 5654608 - 5654658
Alignment:
Q  35 attacactgaattctgttattttctcaaattattagcagtgtcggcatgtc 85  Q
    |||||| |||||| ||| ||||||||||||||||| |||||||| ||||||    
T  5654608 attacattgaattatgtcattttctcaaattattatcagtgtcgacatgtc 5654658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 5775363 - 5775409
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattatta 69  Q
    ||||| |||||||||||||| |||| ||| |||||||||||||||||    
T  5775363 ccgacacatataattacacttaattatgtgattttctcaaattatta 5775409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 9996888 - 9996838
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcgg 79  Q
    |||||||||| |||||||| ||| ||||||||||||||||  |||||||||    
T  9996888 catataattatactgaattatgtgattttctcaaattattgtcagtgtcgg 9996838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 119
Target Start/End: Original strand, 12797353 - 12797438
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcata 119  Q
    ||||||||||||||| ||| ||||| ||||||||||||   || |||| |||||||||  ||||||| | ||||| |||||||||||    
T  12797353 taattacactgaattatgtgatttt-tcaaattattagttttgccggcgtgtcagtgtccgtgtcgtatccgtatccgtgcttcata 12797438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 69
Target Start/End: Original strand, 19230322 - 19230360
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattatta 69  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  19230322 tataattacattgaattatgttattttctcaaattatta 19230360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 30298991 - 30298933
Alignment:
Q  33 taattacactgaattctgttattttct-caaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||| ||| ||||| | |||||||||||| |||||||| |||||||||    
T  30298991 taattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgt 30298933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 30327859 - 30327801
Alignment:
Q  33 taattacactgaattctgttattttct-caaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||| ||| ||||| | |||||||||||| |||||||| |||||||||    
T  30327859 taattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgt 30327801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 111
Target Start/End: Complemental strand, 40481680 - 40481603
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgt 111  Q
    ||||||||||||||| ||| ||||| ||||||||||||  || ||||| |||||||||  ||||||||| ||| |||||    
T  40481680 taattacactgaattatgtgatttt-tcaaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtccgtgttcgt 40481603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 4672090 - 4672147
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggc 80  Q
    ||||| ||||||  ||||||||||| ||| |||||| |||||||||||| ||||||||    
T  4672090 ccgacacatatagctacactgaattatgtaattttcccaaattattagctgtgtcggc 4672147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 7970567 - 7970501
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc 97  Q
    ||||||||||||||||||| | | ||||||||  |||||| || ||||| |||||||||||| ||||||    
T  7970567 catataattacactgaattatatgattttctc--attattggcggtgtcagcatgtcagtgtctgtgtc 7970501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 9299066 - 9299126
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||||||||||| |||  | |||||||||||||||||||||| ||| ||| |||||||||    
T  9299066 catataattacacttaata-tattattttctcaaattattagcaatgttggcgtgtcagtgt 9299126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 16189763 - 16189710
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgt 76  Q
    ||||| || |||||||||||||||| ||| ||||||||||||| ||||| ||||    
T  16189763 ccgacacacataattacactgaattatgtgattttctcaaatttttagcggtgt 16189710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 17425403 - 17425456
Alignment:
Q  32 ataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtc 85  Q
    |||||||||||||||| ||  |||||||||||||||||| ||||| || |||||    
T  17425403 ataattacactgaattatgcgattttctcaaattattaggagtgttggtatgtc 17425456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 18576048 - 18576093
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagt 74  Q
    ||||||||||||| ||||| ||| ||||||||||||||| ||||||    
T  18576048 catataattacaccgaattatgtgattttctcaaattatcagcagt 18576093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 5414183 - 5414255
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||| ||| ||| ||||||| |||  |||||| |||||||| |||| ||||  |||||||||    
T  5414183 catataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtccgtgtccgtgtcgtgt 5414255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 7012105 - 7012053
Alignment:
Q  38 acactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||||||| ||| ||||||||||||||||| | |||||||| |||| ||||    
T  7012105 acactgaattatgtcattttctcaaattattatcggtgtcggcgtgtcggtgt 7012053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 17345451 - 17345487
Alignment:
Q  54 ttttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||||||||||||||| |||||||| |||||||||    
T  17345451 ttttctcaaattattagcggtgtcggcgtgtcagtgt 17345487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 35161082 - 35161034
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcgg 79  Q
    ||||||||||||||||| ||| |||||||  ||||| ||||||||||||    
T  35161082 tataattacactgaattatgtgattttcttgaattagtagcagtgtcgg 35161034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 35952628 - 35952684
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtc 85  Q
    |||||||||||| |||||| | | ||||| ||||||||||||||||| |||| ||||    
T  35952628 catataattacattgaattatatgattttatcaaattattagcagtggcggcgtgtc 35952684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 37698759 - 37698719
Alignment:
Q  30 atataattacactgaattctgttattttctcaaattattag 70  Q
    |||||||||||||||||| | | ||||||||||||||||||    
T  37698759 atataattacactgaattatataattttctcaaattattag 37698719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 38148741 - 38148785
Alignment:
Q  34 aattacactgaattctgttattttctcaaattattagcagtgtcg 78  Q
    |||||||||||||| ||| ||||||||||| ||||||| ||||||    
T  38148741 aattacactgaattatgtgattttctcaaactattagcggtgtcg 38148785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 135317 - 135398
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 104  Q
    ||||| ||||||||||||| ||||| ||| |||||||||||||||||||||||||||  |||  |||| |||||||| ||||    
T  135317 ccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcggtgtgttggtgtctgtgtcgtattcg 135398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 92851 - 92794
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||| ||| ||||||||||||||||||| |||||||| |||||||||    
T  92851 taattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgt 92794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 263385 - 263453
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 99  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||| | |||||||||||  |||||||    
T  263385 tataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcagtgtccgtgtcgt 263453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 477 - 548
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 104  Q
    ||||||||||||||| ||| ||||| |||||||||||||||||||||| | |||||||  ||| ||||||||    
T  477 taattacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcg 548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 70324 - 70238
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtg-tcgtgttcgtattcgtgcttc 116  Q
    ||||||||||||||||| ||||||||| ||||||||||| | |||||| |||||| |||| |||| | |||| ||||| ||||||||    
T  70324 tataattacactgaattatgttattttttcaaattattaactgtgtcgacatgtctgtgtctgtgtttgtgtccgtatccgtgcttc 70238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 51855 - 51798
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||| ||| ||||| ||||||||||||| |||||||| |||||||||    
T  51855 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 51798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 20216 - 20148
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||| ||| ||||| ||||||||||||| |||||||| ||||| |||  |||||||||    
T  20216 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgt 20148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 3864 - 3932
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||| ||| ||||| | ||||||||| | |||||||||| ||||||| ||||||||||    
T  3864 taattacactgaattatgtgatttttttaaattattaaccgtgtcggcatatcagtgtctgtgtcgtgt 3932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 33378 - 33430
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtc 85  Q
    ||||||||||||||| ||||||||| ||||||||||||| |||||||| ||||    
T  33378 taattacactgaattatgttattttttcaaattattagctgtgtcggcgtgtc 33430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 13454 - 13387
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||| | ||||| ||||||||| ||| ||||||||||||||||||  |||||||| |||||||||    
T  13454 ccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgt 13387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 21873 - 21940
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||| | ||||| ||||||||| ||| ||||||||||||||||||  |||||||| |||||||||    
T  21873 ccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgt 21940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 9752 - 9819
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||| |||||||||||||||||||  || ||||||||||||||||||  | ||||||||||| ||||    
T  9752 ccgacacatataattacactgaattaagtgattttctcaaattattagtggcgtcggcatgtctgtgt 9819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 1083 - 1013
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 99  Q
    |||||| |||||||||||| ||| ||||| ||||||||||||| |||||||  |||||| || ||||||||    
T  1083 catatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcagcgtctgtgtcgt 1013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 101
Target Start/End: Complemental strand, 21097 - 21019
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||| |||||||||| || || || ||| ||||||||||||||||| | ||||| ||||||||||||  |||||||||    
T  21097 ccgacacatataattataccgacttatgtgattttctcaaattattaaccgtgtcagcatgtcagtgtccgtgtcgtgt 21019  T

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Target: scaffold0123 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 44530 - 44584
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtc 77  Q
    ||||| ||||||||||||||||||| ||| ||||||||||||| ||||| |||||    
T  44530 ccgacacatataattacactgaattatgtgattttctcaaatttttagcggtgtc 44584  T

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Target: scaffold0007 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 225281 - 225351
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    |||||||||| || ||| ||| ||||||||||||||||| | |||||||| |||||||||  |||||||||    
T  225281 tataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgt 225351  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 241639 - 241549
Alignment:
Q  32 ataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttc-gtattcgtgcttcataga 121  Q
    ||||||||||| |||| ||| |||||  |||||||||||| |||||||| |||||||||  ||||||||| | || | |||||||||||||    
T  241639 ataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgcttcataga 241549  T

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Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 99941 - 99880
Alignment:
Q  29 catataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    |||||||||||| |||||| ||||||||||| ||||||||| | |||||| |||||| ||||    
T  99941 catataattacattgaattatgttattttctaaaattattatcggtgtcgacatgtccgtgt 99880  T

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Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 90890 - 90819
Alignment:
Q  30 atataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    |||||||||||||||||| | | |||||||||||||||||   |||| ||  ||||||||| ||||||||||    
T  90890 atataattacactgaattatatgattttctcaaattattaatggtgttggtgtgtcagtgtctgtgtcgtgt 90819  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 192264 - 192321
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||| ||||| ||| ||||||||||||||||| | |||||||| |||||||||    
T  192264 taattacaccgaattatgtaattttctcaaattattaacggtgtcggcgtgtcagtgt 192321  T

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Target: scaffold0018; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 178833 - 178902
Alignment:
Q  33 taattacactgaattctgtt-attttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||| || | ||||| ||||||||||||  |||||||| |||||||||  |||||||||    
T  178833 taattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgt 178902  T

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Target: scaffold0044 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 53226 - 53170
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcag 87  Q
    ||||||||||||||||| ||| |||||||||||||||| || || ||||| ||||||    
T  53226 tataattacactgaattatgtgattttctcaaattattggcggtatcggcgtgtcag 53170  T

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Target: scaffold0027 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 46726 - 46658
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||| ||| ||||| ||||||||||| | |||||||| ||||| |||  |||||||||    
T  46726 taattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgt 46658  T

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Target: scaffold0376 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 6366 - 6312
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtc 77  Q
    ||||| |||||||||||| |||||| ||  ||||| |||||||||||||||||||    
T  6366 ccgacacatataattacattgaattatgcaattttgtcaaattattagcagtgtc 6312  T

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Target: scaffold0246 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 111
Target Start/End: Complemental strand, 19619 - 19542
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgt 111  Q
    ||||||||||||||| ||| ||||| ||||||||||||  || ||||| |||||||||  ||||||||| ||| |||||    
T  19619 taattacactgaattatgtgatttt-tcaaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtccgtgttcgt 19542  T

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Target: scaffold0171 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 23466 - 23396
Alignment:
Q  31 tataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||||| ||| ||||| |  | |||||| | |||||||| ||||||||| ||||||||||    
T  23466 tataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtctgtgtcgtgt 23396  T

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Target: scaffold0361 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 14574 - 14522
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtc 85  Q
    ||||||||||||||| ||| ||||| ||||||||||||  |||||||| ||||    
T  14574 taattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtc 14522  T

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Target: scaffold0110 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 28904 - 28836
Alignment:
Q  23 ccgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtt 91  Q
    ||||| |||||||||||| |||||| ||  ||||||| ||||||||| | |||||||| ||| ||||||    
T  28904 ccgacacatataattacattgaattatgcgattttcttaaattattaacggtgtcggcgtgttagtgtt 28836  T

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Target: scaffold0085 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 26446 - 26348
Alignment:
Q  24 cgacccatataattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc--gtgttcgtattcgtgcttcataga 121  Q
    |||| |||||||  ||| |||||| ||| ||||||||||||||||||  |||||| | ||||| ||| ||||||  |||| |||| ||||||||||||||    
T  26446 cgacacatataacgacattgaattatgtgattttctcaaattattagtggtgtcgacgtgtcactgtctgtgtctagtgtccgta-tcgtgcttcataga 26348  T

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Target: scaffold0053 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 8822 - 8774
Alignment:
Q  53 attttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||| ||||||||||||| |||||||| |||||||||  |||||||||    
T  8822 attttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 8774  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 130526 - 130458
Alignment:
Q  33 taattacactgaattctgttattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 101  Q
    ||||||||||||||| ||| ||||| ||||| ||||| | |||||||| ||||| |||  |||||||||    
T  130526 taattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgtgtcgtgt 130458  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 71769 - 71710
Alignment:
Q  33 taattacactgaattctgttattttct--caaattattagcagtgtcggcatgtcagtgt 90  Q
    ||||||||||||||| ||| ||||| |  |||||||||||| |||||||| |||||||||    
T  71769 taattacactgaattgtgtgattttttttcaaattattagctgtgtcggcgtgtcagtgt 71710  T

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