View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10201A_low_33 (Length: 393)

Name: NF10201A_low_33
Description: NF10201A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10201A_low_33
NF10201A_low_33
[»] chr5 (32 HSPs)
chr5 (9-323)||(14356329-14356641)
chr5 (13-221)||(14357792-14358000)
chr5 (13-225)||(30916028-30916240)
chr5 (13-226)||(33362477-33362690)
chr5 (100-226)||(30912307-30912433)
chr5 (13-82)||(30915634-30915703)
chr5 (163-226)||(19525348-19525411)
chr5 (163-226)||(41905168-41905231)
chr5 (9-226)||(42962016-42962232)
chr5 (163-228)||(328214-328279)
chr5 (163-224)||(19523978-19524039)
chr5 (164-225)||(19825868-19825929)
chr5 (159-223)||(40059384-40059448)
chr5 (95-186)||(42963207-42963298)
chr5 (163-226)||(4568034-4568097)
chr5 (163-226)||(12936162-12936225)
chr5 (163-225)||(6629725-6629787)
chr5 (163-224)||(18677971-18678032)
chr5 (173-225)||(5382936-5382988)
chr5 (163-226)||(224650-224713)
chr5 (163-222)||(1273086-1273145)
chr5 (172-223)||(8762469-8762520)
chr5 (163-226)||(12950320-12950383)
chr5 (163-226)||(15510323-15510386)
chr5 (165-224)||(19050744-19050803)
chr5 (9-80)||(38603656-38603727)
chr5 (172-226)||(1273409-1273463)
chr5 (172-226)||(32411957-32412011)
chr5 (163-228)||(5384406-5384471)
chr5 (163-224)||(20988685-20988746)
chr5 (360-388)||(14356258-14356286)
chr5 (172-224)||(19827209-19827261)
[»] chr8 (38 HSPs)
chr8 (13-226)||(11080942-11081155)
chr8 (16-225)||(42307490-42307698)
chr8 (96-221)||(42314809-42314934)
chr8 (163-226)||(38589814-38589876)
chr8 (163-225)||(16363872-16363934)
chr8 (163-225)||(31623900-31623962)
chr8 (163-225)||(36756058-36756120)
chr8 (13-74)||(35462899-35462960)
chr8 (163-224)||(38591067-38591128)
chr8 (163-224)||(41867976-41868037)
chr8 (163-226)||(24068323-24068386)
chr8 (163-226)||(37472396-37472459)
chr8 (14-80)||(12820010-12820076)
chr8 (163-221)||(21267162-21267220)
chr8 (163-225)||(36070172-36070234)
chr8 (163-225)||(43275744-43275806)
chr8 (163-225)||(43386762-43386824)
chr8 (163-224)||(35945497-35945558)
chr8 (163-224)||(37323343-37323404)
chr8 (163-223)||(36940093-36940153)
chr8 (165-229)||(41178470-41178534)
chr8 (163-226)||(10053804-10053867)
chr8 (163-210)||(19913501-19913548)
chr8 (181-224)||(39544925-39544968)
chr8 (163-226)||(43277981-43278044)
chr8 (14-80)||(12818892-12818958)
chr8 (163-225)||(19914966-19915028)
chr8 (8-74)||(22012287-22012352)
chr8 (163-225)||(29739703-29739765)
chr8 (173-226)||(1570276-1570329)
chr8 (172-229)||(35943897-35943954)
chr8 (165-225)||(39265-39325)
chr8 (165-225)||(3237702-3237762)
chr8 (190-226)||(3271891-3271927)
chr8 (172-224)||(7561794-7561846)
chr8 (190-226)||(30864542-30864578)
chr8 (160-224)||(38790310-38790374)
chr8 (165-225)||(41178732-41178792)
[»] chr4 (57 HSPs)
chr4 (20-224)||(54372741-54372945)
chr4 (20-225)||(54373869-54374074)
chr4 (20-226)||(37642457-37642664)
chr4 (13-211)||(49923675-49923873)
chr4 (13-201)||(49922525-49922713)
chr4 (13-196)||(5546940-5547119)
chr4 (163-223)||(27408759-27408819)
chr4 (163-224)||(11115040-11115101)
chr4 (163-228)||(37560359-37560424)
chr4 (172-225)||(49923865-49923918)
chr4 (9-224)||(21570330-21570544)
chr4 (163-225)||(6616271-6616333)
chr4 (163-226)||(39590934-39590997)
chr4 (163-225)||(33377424-33377486)
chr4 (163-225)||(37558992-37559054)
chr4 (163-224)||(96741-96802)
chr4 (17-138)||(20945391-20945512)
chr4 (172-225)||(29688043-29688096)
chr4 (163-228)||(30682711-30682776)
chr4 (163-224)||(44126591-44126652)
chr4 (163-224)||(47668657-47668718)
chr4 (163-226)||(12396934-12396997)
chr4 (163-225)||(31711086-31711148)
chr4 (163-225)||(39592349-39592411)
chr4 (163-225)||(40143648-40143710)
chr4 (165-210)||(23752025-23752070)
chr4 (165-210)||(28370703-28370748)
chr4 (167-228)||(29833363-29833424)
chr4 (163-227)||(46796086-46796150)
chr4 (163-214)||(35787801-35787852)
chr4 (164-227)||(44305040-44305103)
chr4 (150-225)||(52981197-52981272)
chr4 (163-221)||(1273493-1273550)
chr4 (155-205)||(5548675-5548725)
chr4 (163-225)||(11113736-11113798)
chr4 (163-225)||(15786946-15787008)
chr4 (135-225)||(31205741-31205831)
chr4 (166-224)||(38370277-38370335)
chr4 (164-226)||(38371866-38371928)
chr4 (163-221)||(38553927-38553985)
chr4 (163-225)||(44128394-44128456)
chr4 (165-210)||(306586-306631)
chr4 (163-224)||(937158-937219)
chr4 (160-209)||(5417314-5417363)
chr4 (167-228)||(15446734-15446795)
chr4 (17-74)||(20944421-20944478)
chr4 (163-224)||(29686251-29686312)
chr4 (163-224)||(29834492-29834553)
chr4 (172-225)||(30672133-30672186)
chr4 (176-225)||(38695540-38695589)
chr4 (163-224)||(43894100-43894161)
chr4 (165-210)||(46794849-46794894)
chr4 (163-224)||(52658906-52658967)
chr4 (158-226)||(86796-86864)
chr4 (165-229)||(3217671-3217735)
chr4 (177-225)||(33376212-33376260)
chr4 (190-226)||(43895684-43895720)
[»] chr6 (19 HSPs)
chr6 (13-210)||(682274-682471)
chr6 (13-224)||(683452-683661)
chr6 (163-224)||(8412376-8412437)
chr6 (163-227)||(5311271-5311335)
chr6 (163-223)||(18139547-18139607)
chr6 (163-227)||(31738355-31738419)
chr6 (163-224)||(19368578-19368639)
chr6 (163-223)||(33802077-33802137)
chr6 (163-225)||(33807683-33807745)
chr6 (163-225)||(8447215-8447277)
chr6 (163-225)||(8456019-8456081)
chr6 (167-225)||(22298598-22298656)
chr6 (163-221)||(27438788-27438846)
chr6 (163-225)||(31740332-31740394)
chr6 (163-224)||(13173032-13173093)
chr6 (9-74)||(13561423-13561488)
chr6 (9-74)||(29477890-29477954)
chr6 (171-224)||(34084200-34084253)
chr6 (291-323)||(7312219-7312251)
[»] chr1 (43 HSPs)
chr1 (13-225)||(49619728-49619941)
chr1 (13-224)||(52439195-52439406)
chr1 (13-226)||(49618424-49618637)
chr1 (16-210)||(40779556-40779750)
chr1 (13-208)||(40778383-40778578)
chr1 (116-224)||(38451547-38451655)
chr1 (94-224)||(38451699-38451829)
chr1 (94-222)||(52437905-52438033)
chr1 (163-227)||(14071263-14071327)
chr1 (163-227)||(25787224-25787288)
chr1 (163-226)||(52181365-52181428)
chr1 (163-225)||(25785962-25786024)
chr1 (163-224)||(44977216-44977277)
chr1 (163-211)||(13930735-13930783)
chr1 (174-224)||(21276989-21277039)
chr1 (163-224)||(47411508-47411569)
chr1 (163-226)||(2236806-2236869)
chr1 (163-222)||(13929292-13929351)
chr1 (163-210)||(34531672-34531719)
chr1 (163-222)||(52741485-52741544)
chr1 (163-225)||(47560133-47560195)
chr1 (163-208)||(9119813-9119858)
chr1 (163-224)||(34653430-34653491)
chr1 (163-224)||(35683050-35683111)
chr1 (163-228)||(48935170-48935235)
chr1 (163-211)||(48467269-48467317)
chr1 (15-82)||(45042746-45042813)
chr1 (167-210)||(48467595-48467638)
chr1 (163-229)||(1873914-1873980)
chr1 (163-225)||(2238038-2238100)
chr1 (163-225)||(3978038-3978100)
chr1 (163-225)||(3979373-3979435)
chr1 (167-225)||(13642621-13642679)
chr1 (163-225)||(14390252-14390314)
chr1 (163-225)||(16218538-16218600)
chr1 (163-225)||(47136747-47136809)
chr1 (163-225)||(48974466-48974528)
chr1 (167-224)||(33793774-33793831)
chr1 (165-210)||(38458095-38458140)
chr1 (165-206)||(40135399-40135440)
chr1 (163-224)||(52743036-52743097)
chr1 (163-223)||(47410980-47411040)
chr1 (190-226)||(50678359-50678395)
[»] chr3 (52 HSPs)
chr3 (20-224)||(48336342-48336546)
chr3 (20-225)||(48338034-48338239)
chr3 (13-225)||(14206691-14206902)
chr3 (13-225)||(14214439-14214650)
chr3 (94-206)||(14213145-14213257)
chr3 (13-178)||(8895197-8895362)
chr3 (163-226)||(41387493-41387556)
chr3 (163-226)||(19579213-19579276)
chr3 (163-226)||(41386123-41386186)
chr3 (163-226)||(42633946-42634009)
chr3 (160-226)||(25585890-25585956)
chr3 (163-229)||(54752606-54752672)
chr3 (164-229)||(17345301-17345366)
chr3 (163-224)||(17350162-17350223)
chr3 (163-224)||(42632701-42632762)
chr3 (163-227)||(8372676-8372740)
chr3 (164-224)||(32980513-32980573)
chr3 (9-228)||(50003129-50003348)
chr3 (163-223)||(53808314-53808374)
chr3 (163-226)||(32973132-32973195)
chr3 (163-226)||(53047890-53047953)
chr3 (163-225)||(8371214-8371276)
chr3 (163-225)||(11483047-11483109)
chr3 (163-209)||(39287480-39287526)
chr3 (14-80)||(46690205-46690271)
chr3 (163-225)||(52292588-52292650)
chr3 (163-224)||(10987713-10987774)
chr3 (163-224)||(32974283-32974344)
chr3 (163-224)||(48035384-48035445)
chr3 (165-225)||(2225086-2225146)
chr3 (167-223)||(13078015-13078071)
chr3 (160-224)||(25583109-25583173)
chr3 (163-227)||(39288499-39288563)
chr3 (167-211)||(43101902-43101946)
chr3 (165-225)||(53809555-53809615)
chr3 (163-210)||(5416207-5416254)
chr3 (163-210)||(5417108-5417155)
chr3 (163-226)||(51825681-51825744)
chr3 (163-210)||(52293583-52293630)
chr3 (163-226)||(53049097-53049160)
chr3 (163-226)||(53342709-53342772)
chr3 (163-221)||(39133015-39133073)
chr3 (163-229)||(55442584-55442650)
chr3 (163-225)||(55443610-55443672)
chr3 (163-224)||(7583465-7583526)
chr3 (163-224)||(7820385-7820446)
chr3 (163-224)||(19579354-19579415)
chr3 (163-224)||(26798966-26799027)
chr3 (163-208)||(51401411-51401456)
chr3 (163-224)||(54654026-54654087)
chr3 (190-226)||(30838557-30838593)
chr3 (190-226)||(43103383-43103419)
[»] chr7 (58 HSPs)
chr7 (9-224)||(29658520-29658734)
chr7 (9-210)||(22794228-22794428)
chr7 (13-210)||(29656998-29657196)
chr7 (16-225)||(4973507-4973716)
chr7 (13-226)||(4973959-4974172)
chr7 (20-205)||(32893470-32893656)
chr7 (20-229)||(32894713-32894923)
chr7 (159-225)||(43006379-43006445)
chr7 (163-229)||(22061855-22061921)
chr7 (163-224)||(25153653-25153714)
chr7 (163-226)||(7148118-7148180)
chr7 (163-226)||(41126232-41126295)
chr7 (163-224)||(22060458-22060519)
chr7 (163-228)||(33459603-33459668)
chr7 (172-225)||(44114724-44114777)
chr7 (163-223)||(4858404-4858464)
chr7 (28-80)||(29408385-29408437)
chr7 (163-226)||(22746380-22746443)
chr7 (163-226)||(33458303-33458366)
chr7 (171-222)||(35128230-35128281)
chr7 (163-226)||(38406011-38406074)
chr7 (9-80)||(47536757-47536827)
chr7 (163-225)||(43007709-43007771)
chr7 (160-222)||(43930316-43930378)
chr7 (163-225)||(43936200-43936262)
chr7 (163-224)||(22744741-22744802)
chr7 (163-224)||(40926579-40926640)
chr7 (163-224)||(41616619-41616680)
chr7 (163-227)||(36673896-36673960)
chr7 (163-210)||(7146790-7146836)
chr7 (163-222)||(18802449-18802508)
chr7 (163-210)||(19279672-19279719)
chr7 (19-82)||(29409154-29409217)
chr7 (163-210)||(30224036-30224083)
chr7 (163-210)||(34558361-34558408)
chr7 (163-226)||(35480201-35480263)
chr7 (163-210)||(38001513-38001560)
chr7 (163-222)||(38408334-38408393)
chr7 (163-210)||(43935194-43935241)
chr7 (163-226)||(46674994-46675057)
chr7 (163-225)||(2904107-2904169)
chr7 (163-221)||(25154996-25155054)
chr7 (95-224)||(35045886-35046015)
chr7 (163-225)||(41127231-41127293)
chr7 (135-225)||(43704484-43704574)
chr7 (163-220)||(4857200-4857257)
chr7 (165-210)||(21171548-21171593)
chr7 (164-225)||(26407464-26407524)
chr7 (163-224)||(38002574-38002635)
chr7 (160-225)||(43931923-43931988)
chr7 (174-226)||(13446729-13446781)
chr7 (163-211)||(14109129-14109177)
chr7 (163-211)||(14419086-14419134)
chr7 (172-224)||(19278348-19278400)
chr7 (165-225)||(21171289-21171349)
chr7 (172-224)||(36702772-36702824)
chr7 (163-203)||(45721826-45721866)
chr7 (174-226)||(48672846-48672898)
[»] scaffold0065 (3 HSPs)
scaffold0065 (13-229)||(35353-35568)
scaffold0065 (94-223)||(36737-36866)
scaffold0065 (16-80)||(36625-36689)
[»] scaffold0034 (2 HSPs)
scaffold0034 (92-209)||(98670-98787)
scaffold0034 (93-229)||(98039-98175)
[»] chr2 (33 HSPs)
chr2 (9-203)||(12364206-12364400)
chr2 (9-142)||(12365924-12366055)
chr2 (28-185)||(20921544-20921702)
chr2 (148-225)||(20921475-20921552)
chr2 (9-80)||(370906-370976)
chr2 (163-225)||(3665218-3665280)
chr2 (163-224)||(37867751-37867812)
chr2 (163-211)||(23178942-23178990)
chr2 (163-211)||(23590199-23590247)
chr2 (164-236)||(28108820-28108892)
chr2 (160-224)||(42596555-42596619)
chr2 (163-226)||(37869100-37869163)
chr2 (163-225)||(33837815-33837877)
chr2 (173-222)||(28109939-28109988)
chr2 (164-225)||(42027187-42027248)
chr2 (163-224)||(42029018-42029079)
chr2 (163-227)||(29424672-29424736)
chr2 (163-226)||(3666328-3666390)
chr2 (163-206)||(4630144-4630187)
chr2 (163-226)||(11575515-11575578)
chr2 (95-201)||(1257507-1257613)
chr2 (163-225)||(6706920-6706982)
chr2 (163-225)||(7038392-7038454)
chr2 (163-225)||(32614379-32614441)
chr2 (163-225)||(41312494-41312556)
chr2 (172-220)||(1257622-1257671)
chr2 (163-224)||(12854164-12854225)
chr2 (165-210)||(30202945-30202990)
chr2 (172-225)||(34147133-34147186)
chr2 (95-186)||(371959-372050)
chr2 (172-224)||(23177668-23177720)
chr2 (172-224)||(23588925-23588977)
chr2 (172-228)||(35061381-35061437)
[»] scaffold0013 (2 HSPs)
scaffold0013 (163-225)||(96154-96216)
scaffold0013 (166-225)||(96878-96937)
[»] scaffold0046 (2 HSPs)
scaffold0046 (163-228)||(23397-23462)
scaffold0046 (167-227)||(24879-24939)
[»] scaffold1974 (1 HSPs)
scaffold1974 (163-225)||(688-750)
[»] scaffold1878 (1 HSPs)
scaffold1878 (163-225)||(524-586)
[»] scaffold0290 (2 HSPs)
scaffold0290 (163-225)||(9538-9600)
scaffold0290 (163-226)||(8372-8435)
[»] scaffold0177 (1 HSPs)
scaffold0177 (167-227)||(1747-1807)
[»] scaffold0178 (1 HSPs)
scaffold0178 (167-226)||(2329-2388)
[»] scaffold0024 (1 HSPs)
scaffold0024 (166-225)||(73049-73108)
[»] scaffold2127 (1 HSPs)
scaffold2127 (163-225)||(575-637)
[»] scaffold0011 (1 HSPs)
scaffold0011 (171-225)||(128656-128710)
[»] scaffold0003 (1 HSPs)
scaffold0003 (163-221)||(48516-48574)
[»] scaffold0041 (1 HSPs)
scaffold0041 (13-82)||(1034-1103)
[»] scaffold0839 (1 HSPs)
scaffold0839 (190-226)||(18-54)


Alignment Details
Target: chr5 (Bit Score: 223; Significance: 1e-123; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 9 - 323
Target Start/End: Complemental strand, 14356641 - 14356329
Alignment:
Q  9 gaagaaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaa 108  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||         | | ||||||||||||||    
T  14356641 gaagaaagtaaaataaatcaggtgttggtgatacacaattagatgtgatagacctcattcatccaatggtctctttttttttgag-ttaaaatgaataaa 14356543  T
Q  109 ataggatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggacca 208  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||  |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14356542 ataggatcaaattgaatgatggaaagaagataaacgaccaatttagaacatttaatagttagaggaccaaattgaaaactgaaaataagttaagg-acca 14356444  T
Q  209 aataatctattaagccttaatcatttgatctcctttttgttttcattttggttttataatttggtcaaattggttccagcaaaccaacattgtaggtggt 308  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  14356443 aataatgtattaagccttgatcatttgatctcctttttgttttcattttggttttataatttggtcaaattggttccggcaaaccaacattgtagatggt 14356344  T
Q  309 tcaccgtaaatctta 323  Q
    ||||| |||||||||    
T  14356343 tcaccataaatctta 14356329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 13 - 221
Target Start/End: Original strand, 14357792 - 14358000
Alignment:
Q  13 aaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaaatag 112  Q
    |||||||||||| ||||||||||||||||||||  ||||| ||||||| ||||||||||||| |||||||        ||||||||||| ||||||||||    
T  14357792 aaagtaaaataattcaggtgttggtgatacacagttagatatgatagatctcatttatccaacggtctcctttttttgggggttaaaattaataaaatag 14357891  T
Q  113 gatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaata 212  Q
    || ||||||||||||||||||||||||||| |||  ||||||| || ||||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  14357892 gaccaaattgaatgatggaaagaagataaatgaccgatttggagcgtttaatagttaggggaccaaattaaaaactgaaaataagttaaaggaccaaata 14357991  T
Q  213 atctattaa 221  Q
    || ||||||    
T  14357992 atatattaa 14358000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 13 - 225
Target Start/End: Original strand, 30916028 - 30916240
Alignment:
Q  13 aaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaaatag 112  Q
    ||||||||||||||||||||||||| |||||||  ||||| |||||||||| ||||||||||||||||||        | ||||||||||||| |||||     
T  30916028 aaagtaaaataaatcaggtgttggtaatacacagttagatctgatagacctaatttatccaatggtctcctttttttggaggttaaaatgaatgaaatat 30916127  T
Q  113 gatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaata 212  Q
    || ||||||||||||||||||||||||||| ||| | ||| ||||| ||||||||||| |||| |||||||||||  ||||||||||||||||||||||     
T  30916128 gaccaaattgaatgatggaaagaagataaaagaccactttagaacgtttaatagttaggggactaaattgaaaacataaaataagttaagggaccaaatg 30916227  T
Q  213 atctattaagcct 225  Q
    || ||||||||||    
T  30916228 atgtattaagcct 30916240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 13 - 226
Target Start/End: Original strand, 33362477 - 33362690
Alignment:
Q  13 aaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnngg-ggttaaaatgaataaaata 111  Q
    |||||||||||||| |||| |||||||||||||  ||||| |||||||||||||||||||||||||||||         | ||||||||||||| |||||    
T  33362477 aaagtaaaataaataaggtattggtgatacacagttagatctgatagacctcatttatccaatggtctcctttttttttgaggttaaaatgaatgaaata 33362576  T
Q  112 ggatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaat 211  Q
    ||| ||||||||||||||||||||||||||| ||| ||||| ||| | |||||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  33362577 ggaccaaattgaatgatggaaagaagataaaggaccaattt-gaaagtttaatagttagaggaccaaattaaaaacaaaaaataagttaagggaccaaat 33362675  T
Q  212 aatctattaagcctt 226  Q
     || |||||| ||||    
T  33362676 gatatattaaacctt 33362690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 100 - 226
Target Start/End: Complemental strand, 30912433 - 30912307
Alignment:
Q  100 atgaataaaataggatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagtt 199  Q
    |||||| |||||||| |||||||||||||| |||||||||||| ||| | ||||||||| |||||||||||||||| ||||||||||| |||||||||||    
T  30912433 atgaatgaaataggaccaaattgaatgatgtaaagaagataaaggactactttggaacgtttaatagttagaggactaaattgaaaacagaaaataagtt 30912334  T
Q  200 aagggaccaaataatctattaagcctt 226  Q
    |||| ||||||| || |||||||||||    
T  30912333 aaggaaccaaatgatgtattaagcctt 30912307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 30915703 - 30915634
Alignment:
Q  13 aaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctcc 82  Q
    |||||||||||||||||||||||||||||||||  ||||| ||||||||||||| |||||||||||||||    
T  30915703 aaagtaaaataaatcaggtgttggtgatacacagttagatctgatagacctcatatatccaatggtctcc 30915634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 19525348 - 19525411
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||| || |||||||||||    
T  19525348 atagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaagcctt 19525411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 41905231 - 41905168
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||| |||||||| |||||||  |||||||||||||||||||||| || |||||||||||    
T  41905231 atagttaggggaccaaaatgaaaaccaaaaataagttaagggaccaaatgatgtattaagcctt 41905168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 226
Target Start/End: Complemental strand, 42962232 - 42962016
Alignment:
Q  9 gaagaaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaa 108  Q
    ||||||||||| |||| | ||||||||||||||||| | ||||| | ||||||||| ||||||||| ||||| |         || ||||||| ||||||    
T  42962232 gaagaaagtaatataatt-aggtgttggtgatacaccattagatcttatagacctcctttatccaacggtcttctttttgagaggtttaaaattaataaa 42962134  T
Q  109 ataggatcaaattgaatgatggaaa-gaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggacc 207  Q
    |||||| ||||||| |||||| |||  |||||||| ||| |||||  | || ||||||||||| ||||||| | |||||    || |||||||||||||     
T  42962133 ataggaccaaattg-atgatgaaaacaaagataaaggaccaatttaaagcgtttaatagttaggggaccaattcgaaaaaaagaattaagttaagggaca 42962035  T
Q  208 aaataatctattaagcctt 226  Q
    |||  || |||||||||||    
T  42962034 aaacgatgtattaagcctt 42962016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 328214 - 328279
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagccttaa 228  Q
    |||||||| ||||||||||||||||  ||||||||||||| || ||||| || |||||||||||||    
T  328214 atagttaggggaccaaattgaaaacaaaaaataagttaagtgatcaaatgatgtattaagccttaa 328279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 19524039 - 19523978
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||  ||||||||||||||||  |||||||||||||||||||||| || |||||||||    
T  19524039 atagttaagggaccaaattgaaaaccaaaaataagttaagggaccaaatgatatattaagcc 19523978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 19825929 - 19825868
Alignment:
Q  164 tagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    ||||||| ||| ||||||||||||  |||||||||||||||||||||| || ||||||||||    
T  19825929 tagttaggggatcaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaagcct 19825868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 40059384 - 40059448
Alignment:
Q  159 cttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagc 223  Q
    |||||||||||| ||| |||| |||||||  |||||||||||||||||||||| || ||||||||    
T  40059384 cttaatagttaggggatcaaaatgaaaaccaaaaataagttaagggaccaaattatatattaagc 40059448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 95 - 186
Target Start/End: Original strand, 42963207 - 42963298
Alignment:
Q  95 ttaaaatgaataaaataggatcaaattgaatgatggaaagaa-gataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaa 186  Q
    ||||||| ||||||||||||| ||||||| ||||| ||| || |||||| ||| || ||| |||| ||||||||||||||||||| |||||||    
T  42963207 ttaaaattaataaaataggattaaattga-tgatgaaaacaaagataaatgaccaaattgaaacgtttaatagttagaggaccaatttgaaaa 42963298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 4568034 - 4568097
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||| |||||||| ||||| | ||||||||||||||||||||||  || |||||||||||    
T  4568034 atagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcctt 4568097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 12936162 - 12936225
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||| |||||||| |||||||  ||||||||||||||||| |||| || |||||||||||    
T  12936162 atagttaggggaccaaaatgaaaaccaaaaataagttaagggactaaatgatgtattaagcctt 12936225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 6629787 - 6629725
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| |||||||| |||||||   ||||||||||||||||||||| || ||||||||||    
T  6629787 atagttaggggaccaaagtgaaaaccacaaataagttaagggaccaaatgatgtattaagcct 6629725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 18678032 - 18677971
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| ||| |||| |||||||  |||||||||||||||||||||| || |||||||||    
T  18678032 atagttaggggatcaaagtgaaaaccaaaaataagttaagggaccaaatgatgtattaagcc 18677971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 5382988 - 5382936
Alignment:
Q  173 gaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| ||||||  |||||||||||||||||||||| || ||||||||||    
T  5382988 gaccaaatagaaaaccaaaaataagttaagggaccaaatgatgtattaagcct 5382936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 224650 - 224713
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||| |||||||| |||||||  ||||||||||||||||||| || || |||||| ||||    
T  224650 atagttaggggaccaaaatgaaaacataaaataagttaagggaccagatgatgtattaaacctt 224713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 1273145 - 1273086
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaag 222  Q
    ||||||| ||||||||| |||||||  ||||||| |||||||||||||| || |||||||    
T  1273145 atagttaaaggaccaaaatgaaaaccaaaaataaattaagggaccaaatgatgtattaag 1273086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 8762469 - 8762520
Alignment:
Q  172 ggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagc 223  Q
    ||||||||||||||| | |||||||||||||||||||||  || ||||||||    
T  8762469 ggaccaaattgaaaattaaaaataagttaagggaccaaacgatatattaagc 8762520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 12950320 - 12950383
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||| |||||||| |||||||   |||||||||||||||| |||| || |||||||||||    
T  12950320 atagttaggggaccaaaatgaaaaccataaataagttaagggactaaatgatgtattaagcctt 12950383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 15510323 - 15510386
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||| ||| |||| ||||| | ||||||||||||||||||||||  || |||||||||||    
T  15510323 atagttaggggatcaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcctt 15510386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 165 - 224
Target Start/End: Complemental strand, 19050803 - 19050744
Alignment:
Q  165 agttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||| |||||||||||||| |  |||||||||||||||||||||  || |||||||||    
T  19050803 agttaggggaccaaattgaaatccaaaaataagttaagggaccaaaacatgtattaagcc 19050744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 38603656 - 38603727
Alignment:
Q  9 gaagaaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtct 80  Q
    ||||||||| | |||||| ||||||||||||||||| | ||||| |||| |||||  ||||||||| |||||    
T  38603656 gaagaaagtgatataaatgaggtgttggtgatacactattagatctgatggaccttctttatccaacggtct 38603727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 1273409 - 1273463
Alignment:
Q  172 ggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||| |||||||  |||||||||||||||||||||  || |||||||||||    
T  1273409 ggaccaaaatgaaaaccaaaaataagttaagggaccaaacgatatattaagcctt 1273463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 32412011 - 32411957
Alignment:
Q  172 ggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||||||||| |  |||||||||||||||||||||  || |||||||||||    
T  32412011 ggaccaaattgaaatccaaaaataagttaagggaccaaaacatgtattaagcctt 32411957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 5384406 - 5384471
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagccttaa 228  Q
    |||||||| ||| |||||||||||   ||||||| |||||| ||||||| || |||||||||||||    
T  5384406 atagttaggggatcaaattgaaaatcaaaaataaattaaggaaccaaatgatgtattaagccttaa 5384471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 20988746 - 20988685
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| |||||||| |||||   ||||||||||||||||||||||  || |||||||||    
T  20988746 atagttaggggaccaaaatgaaattcgaaaataagttaagggaccaaagcatgtattaagcc 20988685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 360 - 388
Target Start/End: Complemental strand, 14356286 - 14356258
Alignment:
Q  360 caaaacaaggatcgttgtatcacaaaagt 388  Q
    |||||||||||||||||||||||||||||    
T  14356286 caaaacaaggatcgttgtatcacaaaagt 14356258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 19827209 - 19827261
Alignment:
Q  172 ggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    ||||||||||||||||  ||||||||||||| ||| |||| || |||||||||    
T  19827209 ggaccaaattgaaaaccaaaaataagttaagagactaaatgatgtattaagcc 19827261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 134; Significance: 1e-69; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 13 - 226
Target Start/End: Original strand, 11080942 - 11081155
Alignment:
Q  13 aaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaaatag 112  Q
    |||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||| |||||||        | ||||||||||||| ||||||    
T  11080942 aaagtaaaataaatcaggtgttggtgatacacagttagatctgatagacctcatttatccaaaggtctccttttttttgaggttaaaatgaatgaaatag 11081041  T
Q  113 gatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaata 212  Q
    || ||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||     
T  11081042 gaccaaattgaatgatggaaagaagataaaggaccaatttggaacgtttaatagttagaggaccaaattgaaaacagaaaataagttaagggatcaaatg 11081141  T
Q  213 atctattaagcctt 226  Q
    || |||||||||||    
T  11081142 atgtattaagcctt 11081155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 225
Target Start/End: Complemental strand, 42307698 - 42307490
Alignment:
Q  16 gtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaaataggat 115  Q
    |||||||||||||| |||| ||||||||||| ||||| |||||||||| |||||||||||| ||||         ||  |||||||||||||||||||      
T  42307698 gtaaaataaatcagatgttagtgatacacaattagatatgatagaccttatttatccaatgatctcattttttgtgga-ttaaaatgaataaaataggtc 42307600  T
Q  116 caaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatc 215  Q
     ||||| |||||||||||||||||||| ||| |||||| ||   ||||||||||| |||||||||||||||| |||||||||||||| || | ||| ||     
T  42307599 taaattaaatgatggaaagaagataaatgactaatttgaaatatttaatagttaggggaccaaattgaaaacagaaaataagttaagagatcgaatgatg 42307500  T
Q  216 tattaagcct 225  Q
    ||||||||||    
T  42307499 tattaagcct 42307490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 42314809 - 42314934
Alignment:
Q  96 taaaatgaataaaataggatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaata 195  Q
    |||||||||||||||  || |||||||||||| ||||||||||||||  || |||||| |||| ||||||||||| | | |||||||||||  |||||||    
T  42314809 taaaatgaataaaatgagaccaaattgaatgaaggaaagaagataaagaaccaatttgaaacgtttaatagttagggaatcaaattgaaaatagaaaata 42314908  T
Q  196 agttaagggaccaaataatctattaa 221  Q
    | |||||| | ||||| || ||||||    
T  42314909 aattaaggaatcaaatgatgtattaa 42314934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 38589876 - 38589814
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||| || |||||||||||    
T  38589876 atagttagaggaccaaattgaaaaca-aaaataagttaagggaccaaatgatgtattaagcctt 38589814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 16363872 - 16363934
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    ||||||||||||||||| |||||||  |||||||||||||||||||||| || ||||||||||    
T  16363872 atagttagaggaccaaagtgaaaaccaaaaataagttaagggaccaaattatatattaagcct 16363934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 31623962 - 31623900
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||| || ||||||||||    
T  31623962 atagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaagcct 31623900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 36756120 - 36756058
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||  |||||||||| |||||| |||||||||||||||||||||| || ||||||||||    
T  36756120 atagttatgggaccaaattaaaaactaaaaataagttaagggaccaaatgatgtattaagcct 36756058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 35462899 - 35462960
Alignment:
Q  13 aaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaa 74  Q
    |||||||||||||| |||||||||||||||||   |||||  ||||||||||||||||||||    
T  35462899 aaagtaaaataaattaggtgttggtgatacactgttagatcagatagacctcatttatccaa 35462960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 38591067 - 38591128
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| |||||||||||||||   |||||||||||||||||||||| || |||||||||    
T  38591067 atagttaggggaccaaattgaaaatcaaaaataagttaagggaccaaatgatgtattaagcc 38591128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 41867976 - 41868037
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| |||||||| |||||||| ||||||| |||||||||||||| || |||||||||    
T  41867976 atagttaggggaccaaagtgaaaactaaaaataaattaagggaccaaatgatgtattaagcc 41868037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 24068386 - 24068323
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||| |||||||| |||||||  |||||||||||||||||||||  || |||||||||||    
T  24068386 atagttaggggaccaaaatgaaaaccaaaaataagttaagggaccaaagcatgtattaagcctt 24068323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 37472459 - 37472396
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    ||||||||||||||||||| |||||  |||||||||||| |||| |||| || |||||||||||    
T  37472459 atagttagaggaccaaattaaaaaccaaaaataagttaaaggacgaaatgatgtattaagcctt 37472396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 12820010 - 12820076
Alignment:
Q  14 aagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtct 80  Q
    ||||||||||||| ||||||||||||||||||  ||||| ||||  ||||| ||||||||| |||||    
T  12820010 aagtaaaataaattaggtgttggtgatacacagttagatatgatgaacctcctttatccaacggtct 12820076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 21267220 - 21267162
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaa 221  Q
    ||||||||||||||||| |||||||  ||||||||||||| ||||||| ||| ||||||    
T  21267220 atagttagaggaccaaagtgaaaaccaaaaataagttaagcgaccaaacaatgtattaa 21267162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 36070234 - 36070172
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| ||||||||||||||||  ||||||| |||||||| ||||| || ||||||||||    
T  36070234 atagttaggggaccaaattgaaaaccaaaaataaattaagggatcaaatgatgtattaagcct 36070172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 43275806 - 43275744
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| | ||||||||||||||  ||||||||||||| |||||||| || ||||||||||    
T  43275806 atagttagggaaccaaattgaaaacaaaaaataagttaagagaccaaatgatgtattaagcct 43275744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 43386762 - 43386824
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| |||||||| |||||||  ||||||||||||||||||| || || ||||||||||    
T  43386762 atagttaggggaccaaactgaaaaccaaaaataagttaagggaccatatgatgtattaagcct 43386824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 35945497 - 35945558
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||  |||| ||| |||||||  ||||||||||||||||||||||||| |||||||||    
T  35945497 atagttaagggactaaaatgaaaacaaaaaataagttaagggaccaaataatgtattaagcc 35945558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 37323404 - 37323343
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| | ||||||||||||||  ||||||| |||||||||||||| || |||||||||    
T  37323404 atagttagggaaccaaattgaaaaccaaaaataaattaagggaccaaatgatgtattaagcc 37323343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 36940093 - 36940153
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagc 223  Q
    |||||||| ||| |||| |||||||  |||||||||||||||||||||| || ||||||||    
T  36940093 atagttaggggatcaaagtgaaaaccaaaaataagttaagggaccaaatgatgtattaagc 36940153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 41178534 - 41178470
Alignment:
Q  165 agttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagccttaat 229  Q
    |||||||||| ||||||||||    |||||||||||||||||||||  || ||||||||||||||    
T  41178534 agttagaggatcaaattgaaataaaaaaataagttaagggaccaaaacatatattaagccttaat 41178470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 10053804 - 10053867
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||  |||||||| |||||||  ||||||||||||||||| |||| || |||||||||||    
T  10053804 atagttaagggaccaaagtgaaaaccaaaaataagttaagggactaaatgatgtattaagcctt 10053867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 210
Target Start/End: Complemental strand, 19913548 - 19913501
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaa 210  Q
    |||||||||||||||||||||||    |||||||||||||||||||||    
T  19913548 atagttagaggaccaaattgaaattcaaaaataagttaagggaccaaa 19913501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 224
Target Start/End: Complemental strand, 39544968 - 39544925
Alignment:
Q  181 tgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    ||||||| ||||||||||||||||||||||| || |||||||||    
T  39544968 tgaaaacagaaaataagttaagggaccaaatgatgtattaagcc 39544925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 43277981 - 43278044
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||| |||||||||| ||||   |||||||||||||||| ||||| || |||||||||||    
T  43277981 atagttaggggaccaaattaaaaataaaaaataagttaagggatcaaatgatatattaagcctt 43278044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 12818958 - 12818892
Alignment:
Q  14 aagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtct 80  Q
    ||||||||||||| |||||||||||||||| |  ||||| ||||  ||||| ||||||||| |||||    
T  12818958 aagtaaaataaattaggtgttggtgatacagagttagatatgatgaacctcctttatccaacggtct 12818892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 19914966 - 19915028
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||  ||||||||||||||||  |||||||||||| ||||||||  || ||||||||||    
T  19914966 atagttaagggaccaaattgaaaacccaaaataagttaaaggaccaaaccatgtattaagcct 19915028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 22012352 - 22012287
Alignment:
Q  8 agaagaaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaa 74  Q
    ||||||||||||| ||||||||||||||||||||||| |  | || || ||||||||| ||||||||    
T  22012352 agaagaaagtaaa-taaatcaggtgttggtgatacactataaaatctggtagacctcacttatccaa 22012287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 29739703 - 29739765
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| ||| ||||||||||||  ||||||| ||||| |||||||| || ||||||||||    
T  29739703 atagttaggggatcaaattgaaaaccaaaaataaattaagagaccaaatgatgtattaagcct 29739765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 1570276 - 1570329
Alignment:
Q  173 gaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    ||||||||||||||   |||||||||||| |||||||| ||| |||||||||||    
T  1570276 gaccaaattgaaaatgaaaaataagttaaaggaccaaacaatgtattaagcctt 1570329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 35943954 - 35943897
Alignment:
Q  172 ggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagccttaat 229  Q
    |||||||| |||||||  |||||||||||||||||||||  || ||||||||| ||||    
T  35943954 ggaccaaaatgaaaaccaaaaataagttaagggaccaaacgatgtattaagccgtaat 35943897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 39265 - 39325
Alignment:
Q  165 agttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||| |||||||||||||| || | ||||||||||||||| |||  || ||||||||||    
T  39265 agttaggggaccaaattgaaatctaataataagttaagggactaaagtatgtattaagcct 39325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 3237702 - 3237762
Alignment:
Q  165 agttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||| |||| ||| ||||| |  |||||||||||||||||||||| || ||||||||||    
T  3237702 agttaggggactaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaagcct 3237762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 3271927 - 3271891
Alignment:
Q  190 aaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||||||||||||||||| || |||||||||||    
T  3271927 aaaataagttaagggaccaaatcatgtattaagcctt 3271891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 7561846 - 7561794
Alignment:
Q  172 ggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||||||||| |  |||||||||||||||||||||  || |||||||||    
T  7561846 ggaccaaattgaaatccaaaaataagttaagggaccaaagcatgtattaagcc 7561794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 30864542 - 30864578
Alignment:
Q  190 aaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||||||||||||||||| || |||||||||||    
T  30864542 aaaataagttaagggaccaaatcatgtattaagcctt 30864578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 38790310 - 38790374
Alignment:
Q  160 ttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    ||||||||||| | |||||| ||||||  ||||||||||||||||| ||| | || |||||||||    
T  38790310 ttaatagttagggaaccaaaatgaaaaacgaaaataagttaagggatcaactgatgtattaagcc 38790374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 41178732 - 41178792
Alignment:
Q  165 agttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||| ||||||||||||||    |||||||||||||||||||||  || ||||||||||    
T  41178732 agttaggggaccaaattgaaattcaaaaataagttaagggaccaaagcatgtattaagcct 41178792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 133; Significance: 5e-69; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 20 - 224
Target Start/End: Complemental strand, 54372945 - 54372741
Alignment:
Q  20 aataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaaataggatcaaa 119  Q
    ||||||||||||||||||||||||||  ||||| | ||||||||||||||||||| |||||||        |||||||||||||||||||||||| ||||    
T  54372945 aataaatcaggtgttggtgatacacagttagatctaatagacctcatttatccaacggtctccttttcttgggggttaaaatgaataaaataggaccaaa 54372846  T
Q  120 ttgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctatt 219  Q
    ||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||    
T  54372845 ttgaatgatggaaagaagataaaggaccaatttggaacgtttaatagttagaggaccaaattgaaaacggaaaataagttaagggaccaaatgatgtatt 54372746  T
Q  220 aagcc 224  Q
    |||||    
T  54372745 aagcc 54372741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 20 - 225
Target Start/End: Original strand, 54373869 - 54374074
Alignment:
Q  20 aataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaaataggatcaaa 119  Q
    ||||||||||||||||||||||||||  ||||| | |||||||||||||||||| ||||||||        |||||||||||||||||||||||| ||||    
T  54373869 aataaatcaggtgttggtgatacacagttagatcttatagacctcatttatccagtggtctccttttcttgggggttaaaatgaataaaataggaccaaa 54373968  T
Q  120 ttgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctatt 219  Q
    ||||||||||||||||||||||| ||| ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||| || ||||    
T  54373969 ttgaatgatggaaagaagataaaggaccaatttagaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggatcaaatgatgtatt 54374068  T
Q  220 aagcct 225  Q
    ||||||    
T  54374069 aagcct 54374074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 37642457 - 37642664
Alignment:
Q  20 aataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnngg-ggttaaaatgaataaaataggatcaa 118  Q
    ||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||        || ||||||||||||| |||||||| |||    
T  37642457 aataaatcaggtgttggtgatacacaattagatctgataaacctcatttatccaatggtctccttttttttggaggttaaaatgaatgaaataggaccaa 37642556  T
Q  119 attgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctat 218  Q
    |||||||||||||||||||||||| ||| | |||| |||| ||||||||||| |||| ||||||||||| |||||||||||||||||||||||||| |||    
T  37642557 attgaatgatggaaagaagataaaggactattttgaaacgtttaatagttaggggactaaattgaaaacagaaaataagttaagggaccaaataatgtat 37642656  T
Q  219 taagcctt 226  Q
    ||||||||    
T  37642657 taagcctt 37642664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 13 - 211
Target Start/End: Original strand, 49923675 - 49923873
Alignment:
Q  13 aaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaaatag 112  Q
    |||||||||||||||| ||||||||||||||||  ||||| ||||||||||||| ||||||| |||||||         |||||||||| ||||||||||    
T  49923675 aaagtaaaataaatcacgtgttggtgatacacagttagatctgatagacctcatctatccaacggtctccttttcttgagggttaaaataaataaaatag 49923774  T
Q  113 gatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaat 211  Q
    |  |||||||||||||| |||||||||||| ||| |||||| |||| ||||||||||  |||||||||| |||||||||||||||||||||||||||||    
T  49923775 ggccaaattgaatgatgaaaagaagataaaggaccaatttgaaacgtttaatagttaagggaccaaattaaaaactgaaaataagttaagggaccaaat 49923873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 13 - 201
Target Start/End: Complemental strand, 49922713 - 49922525
Alignment:
Q  13 aaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaaatag 112  Q
    |||||||||||||||| ||||||||| ||||||  ||||| ||||||||||||| ||||||| ||||||          |||||||||||||||||||||    
T  49922713 aaagtaaaataaatcatgtgttggtgctacacagttagatctgatagacctcatctatccaacggtctcattttcttgagggttaaaatgaataaaatag 49922614  T
Q  113 gatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaa 201  Q
    | |||||||||||||  ||||||||||||| ||| |||||| || | |||||| ||| | ||||||||| |||||| ||||||| ||||    
T  49922613 ggtcaaattgaatgacagaaagaagataaaagaccaatttgaaatgtttaataattaaaagaccaaattaaaaactaaaaataaattaa 49922525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 196
Target Start/End: Complemental strand, 5547119 - 5546940
Alignment:
Q  13 aaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaaatag 112  Q
    ||||||||||||||| |||||||||||| ||||  ||||| |||||||| |||||||||||| |||||||        || |||||||||||||||||      
T  5547119 aaagtaaaataaatctggtgttggtgattcacacttagatctgatagacgtcatttatccaacggtctcctttttttgggtgttaaaatgaataaaat-- 5547022  T
Q  113 gatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataa 196  Q
     || ||||| ||||||| |||||||||||| ||| ||||||  ||| ||||||||||| || |||||||||||||  |||||||    
T  5547021 -attaaattaaatgatgaaaagaagataaaggaccaatttgatacgtttaatagttag-gggccaaattgaaaacataaaataa 5546940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 27408819 - 27408759
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagc 223  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  27408819 atagttagatgaccaaattgaaaactgaaaataagttaagggaccaaatgatgtattaagc 27408759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 11115040 - 11115101
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||| || |||||||||    
T  11115040 atagttaggggaccaaaatgaaaactgaaaataagttaagggaccaaatgatgtattaagcc 11115101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 37560359 - 37560424
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagccttaa 228  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||| || |||||||||||||    
T  37560359 atagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaagccttaa 37560424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 49923865 - 49923918
Alignment:
Q  172 ggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  49923865 ggaccaaattgaaaactgaaaataagttaagggaccaaatgatatattaagcct 49923918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 224
Target Start/End: Original strand, 21570330 - 21570544
Alignment:
Q  9 gaagaaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaa 108  Q
    ||||||||||| |||| | ||| | ||||||||||| | ||||| ||||||||||| ||||||||| ||||| |         || ||||||| ||||||    
T  21570330 gaagaaagtaatataatt-aggcgctggtgatacacgattagatctgatagacctcctttatccaacggtcttctttttgagaggtttaaaattaataaa 21570428  T
Q  109 ataggatcaaattgaatgatggaaa-gaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggacc 207  Q
    |||||||||||||| |||||| |||  |||||||| ||| || ||| |||| ||||||||||| ||||||| | |||||    || ||||||||||||||    
T  21570429 ataggatcaaattg-atgatgaaaacaaagataaatgaccaaattgaaacgtttaatagttaggggaccaattcgaaaaaaagaattaagttaagggacc 21570527  T
Q  208 aaataatctattaagcc 224  Q
    |||  || |||||||||    
T  21570528 aaacgatgtattaagcc 21570544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 6616271 - 6616333
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| |||||||| ||||||| ||||||||||||||||||||||| || ||||||||||    
T  6616271 atagttaggggaccaaagtgaaaacggaaaataagttaagggaccaaatgatgtattaagcct 6616333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 39590997 - 39590934
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||| |||||||| |||||||  |||||||||||||||||||||| || |||||||||||    
T  39590997 atagttaggggaccaaagtgaaaaccaaaaataagttaagggaccaaatgatgtattaagcctt 39590934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 33377424 - 33377486
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| |||||||||||||||   |||||||||||||||||||||| || ||||||||||    
T  33377424 atagttaggggaccaaattgaaaatcaaaaataagttaagggaccaaatgatgtattaagcct 33377486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 37559054 - 37558992
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| ||||||||||||||||  |||||||||||||| ||||||| || ||||||||||    
T  37559054 atagttaggggaccaaattgaaaaccaaaaataagttaaggaaccaaatgatgtattaagcct 37558992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 96741 - 96802
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| |||||||| |||||||  ||||||||||||||||||||| ||| |||||||||    
T  96741 atagttaggggaccaaagtgaaaacataaaataagttaagggaccaaacaatgtattaagcc 96802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 20945391 - 20945512
Alignment:
Q  17 taaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaaataggatc 116  Q
    |||||||||| ||||||||||||||||||  ||||| | ||||| ||||||||||||| ||||  |        | ||||||||| ||| |||||||| |    
T  20945391 taaaataaattaggtgttggtgatacacagttagatctaatagaactcatttatccaacggtcctcttttttaggaggttaaaattaatgaaataggacc 20945490  T
Q  117 aaattgaatgatggaaagaaga 138  Q
    || |||||||||||||| ||||    
T  20945491 aagttgaatgatggaaataaga 20945512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 29688043 - 29688096
Alignment:
Q  172 ggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| |||||||  ||||||||||||||||||||||||| ||||||||||    
T  29688043 ggaccaaagtgaaaaccaaaaataagttaagggaccaaataatgtattaagcct 29688096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 30682776 - 30682711
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagccttaa 228  Q
    |||||||  |||||||| |||||||| |||||||||||||||||||||| || |||||||| ||||    
T  30682776 atagttaagggaccaaaatgaaaactaaaaataagttaagggaccaaattatgtattaagctttaa 30682711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 44126652 - 44126591
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    ||||||||| ||||||||||||||   ||||||||||||||||||||| ||| |||||||||    
T  44126652 atagttagaagaccaaattgaaaatgaaaaataagttaagggaccaaacaatgtattaagcc 44126591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 47668657 - 47668718
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| |||||||| ||||||| ||||||||||||| ||||||||| || |||||||||    
T  47668657 atagttaggggaccaaagtgaaaacagaaaataagttaaaggaccaaatgatgtattaagcc 47668718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 12396934 - 12396997
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||| |||||||| ||||| | ||||||||||||||||||||||  || |||||||||||    
T  12396934 atagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaaacatgtattaagcctt 12396997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 31711148 - 31711086
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    ||||||| ||||||||| ||||| |  |||||||||||||||||||||| || ||||||||||    
T  31711148 atagttaaaggaccaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaagcct 31711086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 39592349 - 39592411
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| |||| ||| |||||||  |||||||||||||||||||||| || ||||||||||    
T  39592349 atagttaggggactaaagtgaaaacataaaataagttaagggaccaaatgatatattaagcct 39592411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 40143710 - 40143648
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| |||| ||| |||||||| ||||||||||||| ||||||||||| |||| |||||    
T  40143710 atagttaggggactaaaatgaaaactaaaaataagttaagagaccaaataatgtattgagcct 40143648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 23752070 - 23752025
Alignment:
Q  165 agttagaggaccaaattgaaaactgaaaataagttaagggaccaaa 210  Q
    |||||| |||||||||||||| || |||||||||||||||||||||    
T  23752070 agttaggggaccaaattgaaatctaaaaataagttaagggaccaaa 23752025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 28370703 - 28370748
Alignment:
Q  165 agttagaggaccaaattgaaaactgaaaataagttaagggaccaaa 210  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||    
T  28370703 agttagaggaccaaattgaaatccaaaaataagttaagggaccaaa 28370748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 29833424 - 29833363
Alignment:
Q  167 ttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagccttaa 228  Q
    |||| |||||||| ||||| | ||||||||||||||||||||||  || |||||||||||||    
T  29833424 ttaggggaccaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagccttaa 29833363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 46796086 - 46796150
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctta 227  Q
    |||||||| |||||||| | |||||  |||||||||||||||||||||  || ||||||||||||    
T  46796086 atagttaggggaccaaaattaaaaccaaaaataagttaagggaccaaacgatgtattaagcctta 46796150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 35787852 - 35787801
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataat 214  Q
    ||||||||||||||||| |||||||  ||||||||||| | |||||||||||    
T  35787852 atagttagaggaccaaagtgaaaaccaaaaataagttatgagaccaaataat 35787801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 227
Target Start/End: Original strand, 44305040 - 44305103
Alignment:
Q  164 tagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctta 227  Q
    ||||||| ||||||||||||||||  |||||||||||| | | ||||| || ||||||||||||    
T  44305040 tagttaggggaccaaattgaaaacaaaaaataagttaatgaatcaaatgatatattaagcctta 44305103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 52981197 - 52981272
Alignment:
Q  150 tttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||| ||| ||| |||||| | |||||||| |||||||| |||||||||||||| | |||||||| || |||||||    
T  52981197 tttgaaacacttgatagtttggggaccaaaatgaaaactaaaaataagttaaggaatcaaataatgtagtaagcct 52981272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 1273493 - 1273550
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaa 221  Q
    |||||||| |||||||||| |||||  |||||||||||||||||||||| || ||||||    
T  1273493 atagttaggggaccaaatt-aaaaccaaaaataagttaagggaccaaatgatatattaa 1273550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 5548675 - 5548725
Alignment:
Q  155 aacgcttaatagttagaggaccaaattgaaaactgaaaataagttaaggga 205  Q
    |||| ||||||||||| |||  ||||||||||| |||||||||||||||||    
T  5548675 aacgtttaatagttaggggattaaattgaaaacggaaaataagttaaggga 5548725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 11113798 - 11113736
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||  |||| ||| ||||||| |||||||||||||| |||||||| || ||||||||||    
T  11113798 atagttaagggactaaaatgaaaaccgaaaataagttaagtgaccaaatgatgtattaagcct 11113736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 15787008 - 15786946
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| ||| |||| |||||||  |||||||||||| ||||||||| || ||||||||||    
T  15787008 atagttaggggaacaaaatgaaaacaaaaaataagttaatggaccaaatgatgtattaagcct 15786946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 31205741 - 31205831
Alignment:
Q  135 aagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| ||| | |||| |||| ||||||||||| ||||||| | |||||    || |||||||||||||||||||||  |||||||||    
T  31205741 aagataaaggaccattttgaaacgtttaatagttaggggaccaattcgaaaaaaagaattaagttaagggaccaaataattaattaagcct 31205831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 38370335 - 38370277
Alignment:
Q  166 gttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||| ||||||||||||||   |||||||||||||||||||||  || |||||||||    
T  38370335 gttagatgaccaaattgaaaatgaaaaataagttaagggaccaaacgatgtattaagcc 38370277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 38371866 - 38371928
Alignment:
Q  164 tagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    ||||||| ||| |||| ||||||| |||||||||||||| |||| ||| || |||||||||||    
T  38371866 tagttaggggatcaaactgaaaacagaaaataagttaagagaccgaatgatgtattaagcctt 38371928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 38553985 - 38553927
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaa 221  Q
    ||||||||| ||||||| | ||||| |||||||| |||||||||||||| || ||||||    
T  38553985 atagttagaagaccaaaataaaaacagaaaataaattaagggaccaaatgatgtattaa 38553927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 44128394 - 44128456
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| |||||||||||||||   |||||||||||| ||||||||  || ||||||||||    
T  44128394 atagttaggggaccaaattgaaaatgaaaaataagttaaaggaccaaacgatgtattaagcct 44128456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 306631 - 306586
Alignment:
Q  165 agttagaggaccaaattgaaaactgaaaataagttaagggaccaaa 210  Q
    |||||| |||||||||||||| |  |||||||||||||||||||||    
T  306631 agttaggggaccaaattgaaatccaaaaataagttaagggaccaaa 306586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 937158 - 937219
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| |||||||| ||||| | |||||||| |||||||||||||  || |||||||||    
T  937158 atagttaggggaccaaaatgaaatccgaaaataaattaagggaccaaagcatgtattaagcc 937219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 5417363 - 5417314
Alignment:
Q  160 ttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaa 209  Q
    ||||||||||  |||||||| |||||| | ||||||||||||||||||||    
T  5417363 ttaatagttaagggaccaaactgaaaaattaaaataagttaagggaccaa 5417314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 15446734 - 15446795
Alignment:
Q  167 ttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagccttaa 228  Q
    ||||| ||||||| ||||| |  |||||||||||||||||||||  || |||||||||||||    
T  15446734 ttagatgaccaaaatgaaatccaaaaataagttaagggaccaaagcatgtattaagccttaa 15446795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 20944478 - 20944421
Alignment:
Q  17 taaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaa 74  Q
    |||||||||| |||||||||||||||||   ||||| | ||||| |||||||||||||    
T  20944478 taaaataaattaggtgttggtgatacacggttagatctaatagatctcatttatccaa 20944421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 29686312 - 29686251
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||  |||||||| |||||||  ||||||||||||||||| |||| || |||||||||    
T  29686312 atagttaagggaccaaagtgaaaaccaaaaataagttaagggactaaatgatgtattaagcc 29686251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 29834492 - 29834553
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| ||| |||| ||||| | ||||||||||||||||||||||  || |||||||||    
T  29834492 atagttaggggatcaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcc 29834553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 30672133 - 30672186
Alignment:
Q  172 ggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| ||||| | ||||||||||||||||||||||  || ||||||||||    
T  30672133 ggaccaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcct 30672186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 38695589 - 38695540
Alignment:
Q  176 caaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||| |||||| ||||||| | |||||||||||||||| |||||||||||    
T  38695589 caaaatgaaaattgaaaattatttaagggaccaaataacctattaagcct 38695540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 43894161 - 43894100
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| |||||||| |||||||  ||||||||||||||||| | || || |||||||||    
T  43894161 atagttaggggaccaaactgaaaaccaaaaataagttaagggactatatgatgtattaagcc 43894100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 46794894 - 46794849
Alignment:
Q  165 agttagaggaccaaattgaaaactgaaaataagttaagggaccaaa 210  Q
    |||||| |||||||||||||| |  |||||||||||||||||||||    
T  46794894 agttaggggaccaaattgaaatccaaaaataagttaagggaccaaa 46794849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 52658967 - 52658906
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| |||||||| ||||||   |||||||||||||||||||||  || |||||||||    
T  52658967 atagttaggggaccaaagtgaaaataaaaaataagttaagggaccaaaacatgtattaagcc 52658906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 86864 - 86796
Alignment:
Q  158 gcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||| |||||||| | |||||| |||||||| ||||||| ||||| ||| |||| || |||||||||||    
T  86864 gctttatagttagggaaccaaagtgaaaactaaaaataaattaagagactaaatgatgtattaagcctt 86796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 3217671 - 3217735
Alignment:
Q  165 agttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagccttaat 229  Q
    ||||| ||||||||| |||||    |||||||||||||||| |||| ||| ||||||||||||||    
T  3217671 agttaaaggaccaaagtgaaattcaaaaataagttaagggatcaaagaatgtattaagccttaat 3217735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 33376260 - 33376212
Alignment:
Q  177 aaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||||||  ||||||||||||| |||||||| || ||||||||||    
T  33376260 aaattgaaaaccaaaaataagttaagagaccaaatgatgtattaagcct 33376212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 43895684 - 43895720
Alignment:
Q  190 aaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||||||||||||||||  ||||||||||||||    
T  43895684 aaaataagttaagggaccaaactatctattaagcctt 43895720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 122; Significance: 2e-62; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 13 - 210
Target Start/End: Complemental strand, 682471 - 682274
Alignment:
Q  13 aaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaaatag 112  Q
    |||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||| |||||||         || |||||||||||||||||     
T  682471 aaagtaaaataaatcaagtgttggtgatacacagctagatctgatagacctcatttatccaacggtctcctttttttgtggattaaaatgaataaaataa 682372  T
Q  113 gatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaa 210  Q
    || ||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  682371 gaccaaattgaatgatggaaagaagataaatgaccaatttggaacgtttaatagttagaggaccaaattgaaaacagaaaataagttaaggaaccaaa 682274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 13 - 224
Target Start/End: Original strand, 683452 - 683661
Alignment:
Q  13 aaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaaatag 112  Q
    |||||||||||||||||||||||| |||| |||  ||||| ||||||||||||||||| ||| ||||||          || |||||||||||||||| |    
T  683452 aaagtaaaataaatcaggtgttggagatatacagttagatctgatagacctcatttattcaacggtctctttttttt--ggattaaaatgaataaaatgg 683549  T
Q  113 gatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaata 212  Q
    || |||||||||||| |||||||||||||| ||| |||||| |||| ||||||| ||| |||||||||||||||| ||||||||||||| |||||||||     
T  683550 gaccaaattgaatgaaggaaagaagataaaagaccaatttgaaacgtttaataggtaggggaccaaattgaaaacagaaaataagttaaaggaccaaatg 683649  T
Q  213 atctattaagcc 224  Q
    || |||||||||    
T  683650 atatattaagcc 683661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 8412376 - 8412437
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| |||| |||||||||||  ||||||||||||||||||||||||| |||||||||    
T  8412376 atagttaggggactaaattgaaaacaaaaaataagttaagggaccaaataatgtattaagcc 8412437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 5311335 - 5311271
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctta 227  Q
    |||||||| |||| |||||||||||  |||||||||||||||||||||| || ||||||||||||    
T  5311335 atagttaggggactaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaagcctta 5311271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 18139547 - 18139607
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagc 223  Q
    |||||||||||| |||| ||||||| ||||||||||||||||||||||| || ||||||||    
T  18139547 atagttagaggatcaaagtgaaaacggaaaataagttaagggaccaaatgatgtattaagc 18139607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 31738419 - 31738355
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctta 227  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||  || ||||||||||||    
T  31738419 atagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaaggatgtattaagcctta 31738355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 19368578 - 19368639
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    ||||||||||||||||| ||||| | ||||||||||||||||||||||  || |||||||||    
T  19368578 atagttagaggaccaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcc 19368639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 33802077 - 33802137
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagc 223  Q
    |||||||| |||||||| |||||||  |||||||||||||||||||||| || ||||||||    
T  33802077 atagttaggggaccaaagtgaaaaccaaaaataagttaagggaccaaatgatgtattaagc 33802137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 33807745 - 33807683
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||  |||||||| |||||||  |||||||||||||||| |||||||| ||||||||||    
T  33807745 atagttaagggaccaaagtgaaaaccaaaaataagttaagggatcaaataatgtattaagcct 33807683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 8447277 - 8447215
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| |||||||| ||||| | |||||||||||||||||| |||  || ||||||||||    
T  8447277 atagttaggggaccaaaatgaaatccgaaaataagttaagggactaaagcatatattaagcct 8447215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 8456081 - 8456019
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| |||||||| ||||| | |||||||||||||||||| |||  || ||||||||||    
T  8456081 atagttaggggaccaaaatgaaatccgaaaataagttaagggactaaagcatatattaagcct 8456019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 22298656 - 22298598
Alignment:
Q  167 ttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    ||||||||||||| |||||||  |||||||||||| ||||||||  || ||||||||||    
T  22298656 ttagaggaccaaaatgaaaaccaaaaataagttaaaggaccaaagcatgtattaagcct 22298598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 27438846 - 27438788
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaa 221  Q
    ||||||| ||||||||| ||||| |  |||||||||||||||||||||| || ||||||    
T  27438846 atagttaaaggaccaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaa 27438788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 31740332 - 31740394
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||  ||||||||||||||||  |||||||||||| ||||||||  || ||||||||||    
T  31740332 atagttaagggaccaaattgaaaacaaaaaataagttaaaggaccaaaccatgtattaagcct 31740394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 13173093 - 13173032
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| |||||||| | ||| | ||||||||||||||||||||||  || |||||||||    
T  13173093 atagttaggggaccaaaataaaatccgaaaataagttaagggaccaaagcatgtattaagcc 13173032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 13561488 - 13561423
Alignment:
Q  9 gaagaaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaa 74  Q
    ||||||||| | |||||| ||||||||||||||||| | ||||| |||| |||||  |||||||||    
T  13561488 gaagaaagtgatataaattaggtgttggtgatacactattagatctgatggaccttctttatccaa 13561423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 29477954 - 29477890
Alignment:
Q  9 gaagaaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaa 74  Q
    |||||||||||| ||||||||||||||||||||||| |  | || || ||||||||| ||||||||    
T  29477954 gaagaaagtaaa-taaatcaggtgttggtgatacaccataaaatctggtagacctcacttatccaa 29477890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 34084200 - 34084253
Alignment:
Q  171 aggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    ||||||||| |||||||   ||||||||||||||||||||| || |||||||||    
T  34084200 aggaccaaagtgaaaaccagaaataagttaagggaccaaatgatgtattaagcc 34084253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 323
Target Start/End: Complemental strand, 7312251 - 7312219
Alignment:
Q  291 accaacattgtaggtggttcaccgtaaatctta 323  Q
    |||||||||||||||||||||||||| ||||||    
T  7312251 accaacattgtaggtggttcaccgtagatctta 7312219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 2e-62; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 13 - 225
Target Start/End: Original strand, 49619728 - 49619941
Alignment:
Q  13 aaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaaata- 111  Q
    |||||||||||||||||||||||||||||||||  || || |||||||||||||||||| ||||||||||         |||||||||||||||||| |     
T  49619728 aaagtaaaataaatcaggtgttggtgatacacagttaaatctgatagacctcatttatctaatggtctccttttttttagggttaaaatgaataaaaaaa 49619827  T
Q  112 ggatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaat 211  Q
    ||| ||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  49619828 ggaccaaattgaatgatggaaagaagataaaggaccaatttggaacgtttaatagttaggggaccaaattgaaaactgaaaataaattaagggaccaaat 49619927  T
Q  212 aatctattaagcct 225  Q
     || ||||||||||    
T  49619928 gatgtattaagcct 49619941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 13 - 224
Target Start/End: Original strand, 52439195 - 52439406
Alignment:
Q  13 aaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaaatag 112  Q
    |||||||| ||||| ||||||||||||||||||  ||||| |||||||| |||||||||||| | |||||        || |||||||||||||||||||    
T  52439195 aaagtaaagtaaattaggtgttggtgatacacagttagatctgatagacttcatttatccaacgatctcctttttatgggtgttaaaatgaataaaatag 52439294  T
Q  113 gatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaata 212  Q
     | ||||||||||||||||||||||||||| ||  |||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  52439295 aaccaaattgaatgatggaaagaagataaaggatcaatttgaaacgtttaatagttagaggaccaaattgaaaacagaaaataagttaagggaccaaatg 52439394  T
Q  213 atctattaagcc 224  Q
    || |||||||||    
T  52439395 atgtattaagcc 52439406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 13 - 226
Target Start/End: Complemental strand, 49618637 - 49618424
Alignment:
Q  13 aaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaaatag 112  Q
    |||||||||||||||| ||||||||||||| ||  ||||| ||||||||||||||||||||| |||||||        |||||||||||||||||||||     
T  49618637 aaagtaaaataaatcaagtgttggtgatactcagttagatctgatagacctcatttatccaacggtctcctttttttgggggttaaaatgaataaaatat 49618538  T
Q  113 gatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaata 212  Q
    || |||||||||||||||||||||||||||  || |||||  |||| ||||||||||| |||||||| |||||||||||||||||||||| |||  |||     
T  49618537 gaccaaattgaatgatggaaagaagataaaacaccaatttaaaacgtttaatagttaggggaccaaaatgaaaactgaaaataagttaagagactgaatg 49618438  T
Q  213 atctattaagcctt 226  Q
    || |||||||||||    
T  49618437 atttattaagcctt 49618424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 16 - 210
Target Start/End: Original strand, 40779556 - 40779750
Alignment:
Q  16 gtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaaataggat 115  Q
    ||||||||||||||||||||||||||||||| | ||| |||||||||||| |||||||| |||||||        ||||||||||||||||||||||||     
T  40779556 gtaaaataaatcaggtgttggtgatacacaaattgatatgatagacctcacttatccaacggtctcctttttttgggggttaaaatgaataaaataggac 40779655  T
Q  116 caaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaa 210  Q
    ||| |||||| ||| ||| |||||||| ||| |||||  |||| |||||| ||||| ||| |||||||||||||||||||| |||||||||||||    
T  40779656 caacttgaataatgaaaataagataaatgaccaatttaaaacgtttaataattagatgactaaattgaaaactgaaaataaattaagggaccaaa 40779750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 13 - 208
Target Start/End: Complemental strand, 40778578 - 40778383
Alignment:
Q  13 aaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaaatag 112  Q
    ||||||||||||||||||||  |||||||||||  ||||| | ||||||||||||||||||| |||||||         |||||||||| ||||||||||    
T  40778578 aaagtaaaataaatcaggtgccggtgatacacagttagatctaatagacctcatttatccaacggtctccttttcttgagggttaaaataaataaaatag 40778479  T
Q  113 gatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggacca 208  Q
    || |||||||||||| ||||||||||||||  || ||||| ||||| ||||||||||  |||||||||| ||||||||||||||||||||| ||||    
T  40778478 gaccaaattgaatgaaggaaagaagataaagaaccaatttagaacgtttaatagttaagggaccaaattaaaaactgaaaataagttaaggaacca 40778383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 116 - 224
Target Start/End: Complemental strand, 38451655 - 38451547
Alignment:
Q  116 caaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatc 215  Q
    |||||||||||||||||||||||||||  || ||||||||||| ||||||||||| ||||||||||||||||  |||||||||||||||||||||| ||     
T  38451655 caaattgaatgatggaaagaagataaagtaccaatttggaacgtttaatagttaggggaccaaattgaaaacataaaataagttaagggaccaaatgatg 38451556  T
Q  216 tattaagcc 224  Q
    |||||||||    
T  38451555 tattaagcc 38451547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 94 - 224
Target Start/End: Original strand, 38451699 - 38451829
Alignment:
Q  94 gttaaaatgaataaaataggatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaa 193  Q
    |||||||||||||||||| || |||||||||||||| ||||||||| || ||| ||||| ||||| |||||||||||   ||||||||||||||  ||||    
T  38451699 gttaaaatgaataaaatatgaccaaattgaatgatgaaaagaagatgaaggaccaatttagaacgtttaatagttaggataccaaattgaaaacaaaaaa 38451798  T
Q  194 taagttaagggaccaaataatctattaagcc 224  Q
    ||||||||  |||||||| || |||||||||    
T  38451799 taagttaaatgaccaaatgatgtattaagcc 38451829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 94 - 222
Target Start/End: Complemental strand, 52438033 - 52437905
Alignment:
Q  94 gttaaaatgaataaaataggatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaa 193  Q
    |||||||| |||||||||||| |||||| ||||||| |||||||||||| ||| |||||  |||  ||||||||||   ||||||||||||||| |||||    
T  52438033 gttaaaataaataaaataggaccaaattaaatgatgtaaagaagataaatgaccaatttaaaacatttaatagttaagagaccaaattgaaaacagaaaa 52437934  T
Q  194 taagttaagggaccaaataatctattaag 222  Q
    ||||||||  ||||| || || |||||||    
T  52437933 taagttaaaagaccatatgatgtattaag 52437905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 14071263 - 14071327
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctta 227  Q
    |||||||||||||||||||||||||  ||||||| |||||||||||||| || ||||||||||||    
T  14071263 atagttagaggaccaaattgaaaaccaaaaataaattaagggaccaaatgatgtattaagcctta 14071327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 25787224 - 25787288
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctta 227  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||| || ||||||||||||    
T  25787224 atagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaagcctta 25787288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 52181365 - 52181428
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    ||||||||||||||||||||||||   |||||||||||| ||||||||| ||||||||||||||    
T  52181365 atagttagaggaccaaattgaaaataaaaaataagttaaaggaccaaattatctattaagcctt 52181428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 25786024 - 25785962
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||| || ||||||||||    
T  25786024 atagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaagcct 25785962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 44977277 - 44977216
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| |||||||| |||||||  ||||||||||||||||||||||||| |||||||||    
T  44977277 atagttaggggaccaaagtgaaaaccaaaaataagttaagggaccaaataatgtattaagcc 44977216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 13930735 - 13930783
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaat 211  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  13930735 atagttagaggaccaaattgaaaaccaaaaataagttaagggaccaaat 13930783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 21277039 - 21276989
Alignment:
Q  174 accaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    ||||||||||||||  ||||||||||||||||||||||||| |||||||||    
T  21277039 accaaattgaaaaccaaaaataagttaagggaccaaataatgtattaagcc 21276989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 47411508 - 47411569
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| | ||||||| |||||| ||||||||||||||||||||||| || |||||||||    
T  47411508 atagttagggaaccaaatggaaaaccgaaaataagttaagggaccaaatgatgtattaagcc 47411569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 2236869 - 2236806
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||| |||||||| ||||| | ||||||||||||||||||||||  || |||||||||||    
T  2236869 atagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcctt 2236806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 13929351 - 13929292
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaag 222  Q
    |||||||  ||||||||||||||||  |||||||||||||||||||||| || |||||||    
T  13929351 atagttaagggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaag 13929292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 210
Target Start/End: Complemental strand, 34531719 - 34531672
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaa 210  Q
    ||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  34531719 atagttagaggaccaaaatgaaatccgaaaataagttaagggaccaaa 34531672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 52741544 - 52741485
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaag 222  Q
    ||||||||||||||||| | |||||  |||||||||||||||||||||| || |||||||    
T  52741544 atagttagaggaccaaaataaaaacgaaaaataagttaagggaccaaatgatatattaag 52741485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 47560195 - 47560133
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| |||||||| ||||||  ||||||||| ||||||||||||| || ||||||||||    
T  47560195 atagttaggggaccaaagtgaaaatcgaaaataaggtaagggaccaaatgatgtattaagcct 47560133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 9119858 - 9119813
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggacca 208  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||||    
T  9119858 atagttagaggaccaaattaaaatccgaaaataagttaagggacca 9119813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 34653491 - 34653430
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||  |||||||| ||||||| ||||||||||||||||||||||| || |||| ||||    
T  34653491 atagttaagggaccaaagtgaaaaccgaaaataagttaagggaccaaatgatgtattgagcc 34653430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 35683111 - 35683050
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| |||||||| ||||| | ||||||||||||||||||||||  || |||||||||    
T  35683111 atagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcc 35683050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 48935170 - 48935235
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagccttaa 228  Q
    |||||||| |||||||| ||||| | |||||||||||||||||| |||  || |||||||||||||    
T  48935170 atagttaggggaccaaaatgaaatccgaaaataagttaagggacgaaagcatatattaagccttaa 48935235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 48467317 - 48467269
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaat 211  Q
    |||||||| | ||||||||||||||  ||||||||||||||||||||||    
T  48467317 atagttagggaaccaaattgaaaacaaaaaataagttaagggaccaaat 48467269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 45042813 - 45042746
Alignment:
Q  15 agtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctcc 82  Q
    |||||||||||| || ||||| ||||||||   ||||| ||||| ||||||||||||||| |||||||    
T  45042813 agtaaaataaattagatgttgatgatacacggttagatctgatatacctcatttatccaacggtctcc 45042746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 48467595 - 48467638
Alignment:
Q  167 ttagaggaccaaattgaaaactgaaaataagttaagggaccaaa 210  Q
    |||| |||||||||||||||  ||||||||||||||||||||||    
T  48467595 ttaggggaccaaattgaaaatagaaaataagttaagggaccaaa 48467638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 1873914 - 1873980
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagccttaat 229  Q
    |||||||| |||||||| | |||  |||||||||||||||||| ||||  || ||||||||||||||    
T  1873914 atagttaggggaccaaaataaaatttgaaaataagttaagggatcaaagcatgtattaagccttaat 1873980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 2238038 - 2238100
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||  |||||||| ||||| | ||||||||||||||||||||||  || ||||||||||    
T  2238038 atagttatgggaccaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcct 2238100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 3978100 - 3978038
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    ||||||| ||||||||| |||||    |||||||||||||||||||||| || ||||||||||    
T  3978100 atagttaaaggaccaaaatgaaattcaaaaataagttaagggaccaaatgatgtattaagcct 3978038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 3979373 - 3979435
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||  |||||||| ||||| |  ||||||||||||||||||||||||| ||| ||||||    
T  3979373 atagttaagggaccaaaatgaaatccaaaaataagttaagggaccaaataatgtatcaagcct 3979435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 13642621 - 13642679
Alignment:
Q  167 ttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    ||||||||||||| |||||||  |||||||||||| ||||||||  || ||||||||||    
T  13642621 ttagaggaccaaaatgaaaaccaaaaataagttaaaggaccaaagcatgtattaagcct 13642679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 14390314 - 14390252
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    ||||||||||||||||| |||||    |||||||||||||||||||||  || ||||||||||    
T  14390314 atagttagaggaccaaaatgaaattaaaaaataagttaagggaccaaagcatgtattaagcct 14390252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 16218538 - 16218600
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| ||| || || ||||||| ||||||| ||||||||| |||| |||||||||||||    
T  16218538 atagttaggggatcagatagaaaactaaaaataaattaagggactaaatgatctattaagcct 16218600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 47136747 - 47136809
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| ||||| ||||||||||  |||||||||||| ||| ||||| || ||||||||||    
T  47136747 atagttaggggacctaattgaaaaccaaaaataagttaatggatcaaatgatgtattaagcct 47136809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 48974466 - 48974528
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| | |||||| ||||| | ||||||||||||||||||||||  || ||||||||||    
T  48974466 atagttagggaaccaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcct 48974528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 33793831 - 33793774
Alignment:
Q  167 ttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||| |||||||| |||||||  |||||||||||||||| ||||| || |||||||||    
T  33793831 ttaggggaccaaagtgaaaaccaaaaataagttaagggatcaaatgatgtattaagcc 33793774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 38458140 - 38458095
Alignment:
Q  165 agttagaggaccaaattgaaaactgaaaataagttaagggaccaaa 210  Q
    |||||| |||||||||||||| |  |||||||||||||||||||||    
T  38458140 agttaggggaccaaattgaaatccaaaaataagttaagggaccaaa 38458095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 40135399 - 40135440
Alignment:
Q  165 agttagaggaccaaattgaaaactgaaaataagttaagggac 206  Q
    ||||||||||||||| ||||| || |||||||||||||||||    
T  40135399 agttagaggaccaaaatgaaatctaaaaataagttaagggac 40135440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 52743036 - 52743097
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| |||||||| ||||||   |||||||| ||||||||||||| || |||||||||    
T  52743036 atagttaggggaccaaagtgaaaatgaaaaataagctaagggaccaaatgatgtattaagcc 52743097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 47411040 - 47410980
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagc 223  Q
    |||||||| ||| |||||||||||   ||||||| |||||||||||||| || ||||||||    
T  47411040 atagttaggggatcaaattgaaaatcaaaaataatttaagggaccaaattatgtattaagc 47410980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 50678395 - 50678359
Alignment:
Q  190 aaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||||||||||||||||| || |||||||||||    
T  50678395 aaaataagttaagggaccaaatcatgtattaagcctt 50678359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 121; Significance: 7e-62; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 20 - 224
Target Start/End: Complemental strand, 48336546 - 48336342
Alignment:
Q  20 aataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaaataggatcaaa 119  Q
    |||||||| |||||||||||||||||  ||||| | ||| ||||||||||||||| |||||||        |||||||||||||||||||||||| ||||    
T  48336546 aataaatccggtgttggtgatacacagttagatctaataaacctcatttatccaacggtctccttttcttgggggttaaaatgaataaaataggaccaaa 48336447  T
Q  120 ttgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctatt 219  Q
    ||||||||||||||||||||||| ||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||    
T  48336446 ttgaatgatggaaagaagataaatgatcaatttggaacgtttaatagttagaggaccaaattgaaaactgaaaataagttaagggagcaaatgatgtatt 48336347  T
Q  220 aagcc 224  Q
    |||||    
T  48336346 aagcc 48336342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 20 - 225
Target Start/End: Original strand, 48338034 - 48338239
Alignment:
Q  20 aataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaaataggatcaaa 119  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||||| ||||||  |||||||        | |||||||||||||||||||||| ||||    
T  48338034 aataaatcaggtgttggtgatacacagttagatctgatagacctcatatatccagcggtctccttttcttggtggttaaaatgaataaaataggaccaaa 48338133  T
Q  120 ttgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctatt 219  Q
    ||||||||||||||||||||||| ||| ||||| ||||| |||||||| || | |||||||||||||||||||||||||||||||||||||| || ||||    
T  48338134 ttgaatgatggaaagaagataaaggaccaatttagaacgtttaatagtcagggaaccaaattgaaaactgaaaataagttaagggaccaaatgatgtatt 48338233  T
Q  220 aagcct 225  Q
    ||||||    
T  48338234 aagcct 48338239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 13 - 225
Target Start/End: Original strand, 14206691 - 14206902
Alignment:
Q  13 aaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaaatag 112  Q
    |||||||||||||| || | |||||||||||||  ||||| ||||||||||||||||||||| | ||||         |  |||||||||||||||||||    
T  14206691 aaagtaaaataaattagatattggtgatacacagttagatctgatagacctcatttatccaacg-tctcatttttatggatgttaaaatgaataaaatag 14206789  T
Q  113 gatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaata 212  Q
    || ||||||||||||||||||||||||||| ||| |||||  |||| |||||||||||||||||||||| ||||| |||||||| |||||||||||||||    
T  14206790 gaccaaattgaatgatggaaagaagataaatgaccaatttaaaacgtttaatagttagaggaccaaattaaaaacagaaaataaattaagggaccaaata 14206889  T
Q  213 atctattaagcct 225  Q
    || ||||||||||    
T  14206890 atgtattaagcct 14206902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 13 - 225
Target Start/End: Original strand, 14214439 - 14214650
Alignment:
Q  13 aaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaaatag 112  Q
    |||||||||||||| || | |||||||||||||  ||||| ||||||||||||||||||||| | ||||         |  |||||||||||||||||||    
T  14214439 aaagtaaaataaattagatattggtgatacacagttagatctgatagacctcatttatccaacg-tctcatttttatggatgttaaaatgaataaaatag 14214537  T
Q  113 gatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaata 212  Q
    || ||||||||||||||||||||||||||| ||| |||||  |||| |||||||||||||||||||||| ||||| |||||||| |||||||||||||||    
T  14214538 gaccaaattgaatgatggaaagaagataaatgaccaatttaaaacgtttaatagttagaggaccaaattaaaaacagaaaataaattaagggaccaaata 14214637  T
Q  213 atctattaagcct 225  Q
    || ||||||||||    
T  14214638 atgtattaagcct 14214650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 94 - 206
Target Start/End: Complemental strand, 14213257 - 14213145
Alignment:
Q  94 gttaaaatgaataaaataggatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaa 193  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||||| ||| |||||  |||| || |||||||| |||||||||||||||| |||||    
T  14213257 gttaaaataaataaaatagaatcaaattgaatgatggaaggaagataaaggaccaatttaaaacgtttgatagttaggggaccaaattgaaaacagaaaa 14213158  T
Q  194 taagttaagggac 206  Q
    ||| |||||||||    
T  14213157 taaattaagggac 14213145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 178
Target Start/End: Complemental strand, 8895362 - 8895197
Alignment:
Q  13 aaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaaatag 112  Q
    |||||||||||||| | |||||||||||||||   ||||| |||||||||| |||||||| ||| |||||        ||||||||||| ||| ||||||    
T  8895362 aaagtaaaataaattacgtgttggtgatacacggttagatctgatagacctaatttatccgatgatctccttttttagggggttaaaattaatgaaatag 8895263  T
Q  113 gatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaa 178  Q
    || |||||||||||| ||||| || | ||| ||| || ||| |||| ||| ||||||| |||||||    
T  8895262 gaccaaattgaatgaaggaaacaataaaaatgaccaaattgaaacgtttagtagttagtggaccaa 8895197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 41387493 - 41387556
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||| || |||||||||||    
T  41387493 atagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaagcctt 41387556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 19579276 - 19579213
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||| |||||||| ||||| ||||||||||||||||||||||||  || |||||||||||    
T  19579276 atagttaggggaccaaaatgaaatctgaaaataagttaagggaccaaagcatgtattaagcctt 19579213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 41386186 - 41386123
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||  || |||||||||||    
T  41386186 atagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaacgatgtattaagcctt 41386123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 42633946 - 42634009
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||| |||||||||||||||   |||||||||||||||||||||| || |||||||||||    
T  42633946 atagttaggggaccaaattgaaaatcaaaaataagttaagggaccaaatgatgtattaagcctt 42634009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 25585890 - 25585956
Alignment:
Q  160 ttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||||||||||||| | ||||||   ||||||| ||||||||||||||||| |||||||||||    
T  25585890 ttaatagttagaggaccagagtgaaaataaaaaataaattaagggaccaaataatatattaagcctt 25585956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 54752672 - 54752606
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagccttaat 229  Q
    |||||||| |||| ||||||||||   |||||||||||||||||||||| || ||||||||||||||    
T  54752672 atagttaggggactaaattgaaaatgaaaaataagttaagggaccaaatgatgtattaagccttaat 54752606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 229
Target Start/End: Complemental strand, 17345366 - 17345301
Alignment:
Q  164 tagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagccttaat 229  Q
    ||||||| |||||||  |||||||  ||||||||||||||||||||||||| ||||||||| ||||    
T  17345366 tagttaggggaccaacctgaaaaccaaaaataagttaagggaccaaataatgtattaagccataat 17345301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 17350162 - 17350223
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| ||| ||||||||||||  |||||||||||||||||||||| || |||||||||    
T  17350162 atagttaggggaacaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaagcc 17350223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 42632762 - 42632701
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| ||||||||||||||||  ||| |||||||||||||||||| || |||||||||    
T  42632762 atagttaggggaccaaattgaaaaccaaaagtaagttaagggaccaaatgatgtattaagcc 42632701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 8372676 - 8372740
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctta 227  Q
    |||||||| |||||||| |||||||  |||||||||||||||||||||  || ||||||||||||    
T  8372676 atagttaggggaccaaaatgaaaaccaaaaataagttaagggaccaaacgatatattaagcctta 8372740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 164 - 224
Target Start/End: Original strand, 32980513 - 32980573
Alignment:
Q  164 tagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    ||||||| |||||||||||||||| ||||||||||||| ||| ||||| || |||||||||    
T  32980513 tagttaggggaccaaattgaaaacagaaaataagttaatggatcaaatgatatattaagcc 32980573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 9 - 228
Target Start/End: Original strand, 50003129 - 50003348
Alignment:
Q  9 gaagaaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaa 108  Q
    ||||||||||| |||||| | |||||||||||||||   ||||| |||| |||||| ||||||||| |||||          | | ||||||| ||||||    
T  50003129 gaagaaagtaatataaattatgtgttggtgatacaccgttagatctgattgacctcctttatccaacggtcttatttttaaggagtttaaaattaataaa 50003228  T
Q  109 ataggatcaaattgaatgatggaaa-gaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggacc 207  Q
    |||||| ||||||| |||||  |||  || ||||| ||| | |||| |||| ||||||||||| ||||||| | ||||     || ||||||||||||||    
T  50003229 ataggaccaaattg-atgattaaaacaaacataaaggaccattttgaaacgtttaatagttaggggaccaattcgaaataaagaattaagttaagggacc 50003327  T
Q  208 aaataatctattaagccttaa 228  Q
    |||| ||| ||||||||||||    
T  50003328 aaatgatcaattaagccttaa 50003348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 53808374 - 53808314
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagc 223  Q
    ||||||||  ||||||||| ||||| ||||||||||||||||||||||| || ||||||||    
T  53808374 atagttaggagaccaaattcaaaaccgaaaataagttaagggaccaaatgatgtattaagc 53808314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 32973195 - 32973132
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||| |||||||| ||||| | ||||||||||||||||||||||  || |||||||||||    
T  32973195 atagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcctt 32973132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 53047953 - 53047890
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||| |||||||| ||||| | ||||||||||||||||||||||  || |||||||||||    
T  53047953 atagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcctt 53047890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 8371276 - 8371214
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| |||||||| |||||||  |||||||||||||||| ||||| || ||||||||||    
T  8371276 atagttaggggaccaaaatgaaaacaaaaaataagttaagggatcaaatgatgtattaagcct 8371214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 11483047 - 11483109
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||  |||||||| ||||| ||||||||||||||||||||||||  || ||||||||||    
T  11483047 atagttaagggaccaaaatgaaatctgaaaataagttaagggaccaaagcatatattaagcct 11483109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 209
Target Start/End: Complemental strand, 39287526 - 39287480
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaa 209  Q
    ||||||||||||||||| ||||| | |||||||||||||||||||||    
T  39287526 atagttagaggaccaaaatgaaatccgaaaataagttaagggaccaa 39287480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 46690205 - 46690271
Alignment:
Q  14 aagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtct 80  Q
    ||||||||||||| |||||||||||||||||   ||||| || || ||||| |||||||||||||||    
T  46690205 aagtaaaataaattaggtgttggtgatacacggttagatatggtaaacctcctttatccaatggtct 46690271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 52292650 - 52292588
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| |||||||| ||||| | ||||||||||||||||||||||  || ||||||||||    
T  52292650 atagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcct 52292588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 10987713 - 10987774
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| |||||||| |||||||  |||||||||||||||| ||||| || |||||||||    
T  10987713 atagttaggggaccaaaatgaaaaccaaaaataagttaagggatcaaatgatgtattaagcc 10987774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 32974283 - 32974344
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| |||||||| ||||| | ||||||||||||||||||||||  || |||||||||    
T  32974283 atagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcc 32974344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 48035384 - 48035445
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| |||||||| ||||| | ||||||||||||||||||||||  || |||||||||    
T  48035384 atagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcc 48035445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 2225086 - 2225146
Alignment:
Q  165 agttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||| |||||||||||||| |  |||||||||||||||||||||  || ||||||||||    
T  2225086 agttaggggaccaaattgaaatccaaaaataagttaagggaccaaagcatgtattaagcct 2225146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 13078015 - 13078071
Alignment:
Q  167 ttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagc 223  Q
    ||||||||||||||||||||   ||||||||||||| |||| |||||| ||||||||    
T  13078015 ttagaggaccaaattgaaaatcaaaaataagttaagagacctaataatgtattaagc 13078071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 25583173 - 25583109
Alignment:
Q  160 ttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    ||||||||||| |||||||| ||||||   ||||||||||||||||| |||| || |||||||||    
T  25583173 ttaatagttaggggaccaaagtgaaaatcaaaaataagttaagggactaaatgatgtattaagcc 25583109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 39288499 - 39288563
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctta 227  Q
    |||||||| |||||||| ||||| | |||||||||||||| |||||||  || ||||||||||||    
T  39288499 atagttaggggaccaaaatgaaatccgaaaataagttaagtgaccaaagcatgtattaagcctta 39288563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 43101946 - 43101902
Alignment:
Q  167 ttagaggaccaaattgaaaactgaaaataagttaagggaccaaat 211  Q
    ||||||||||||| |||||||  ||||||||||||||||||||||    
T  43101946 ttagaggaccaaaatgaaaaccaaaaataagttaagggaccaaat 43101902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 53809555 - 53809615
Alignment:
Q  165 agttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||| |||||||| |||||||  ||||||||||||||||| |||| || ||||||||||    
T  53809555 agttaggggaccaaaatgaaaacaaaaaataagttaagggactaaatgatgtattaagcct 53809615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 210
Target Start/End: Complemental strand, 5416254 - 5416207
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaa 210  Q
    |||||||| |||||||| ||||| | ||||||||||||||||||||||    
T  5416254 atagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa 5416207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 5417108 - 5417155
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaa 210  Q
    |||||||| |||||||| ||||| | ||||||||||||||||||||||    
T  5417108 atagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa 5417155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 51825681 - 51825744
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||  |||||||| ||||| |  |||||||||||||||||||||| || |||||||||||    
T  51825681 atagttaagggaccaaagtgaaatccaaaaataagttaagggaccaaatgatatattaagcctt 51825744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 52293583 - 52293630
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaa 210  Q
    |||||||| |||||||| ||||| | ||||||||||||||||||||||    
T  52293583 atagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa 52293630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 53049097 - 53049160
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||| |||||||| | ||| | ||||||||||||||||||||||  || |||||||||||    
T  53049097 atagttaggggaccaaaataaaatccgaaaataagttaagggaccaaaacatgtattaagcctt 53049160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 53342772 - 53342709
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||| |||||||| ||||| | ||||||||||||||| ||||||  || |||||||||||    
T  53342772 atagttaggggaccaaaatgaaatccgaaaataagttaaggaaccaaagcatgtattaagcctt 53342709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 39133073 - 39133015
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaa 221  Q
    |||||||| ||||||||||||||||  ||||||||||||| || ||||| || ||||||    
T  39133073 atagttaggggaccaaattgaaaaccaaaaataagttaagagatcaaatgatgtattaa 39133015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 55442650 - 55442584
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagccttaat 229  Q
    |||||||| |||||||| |||||  |||||||||||||||||| ||||  || |||||| |||||||    
T  55442650 atagttaggggaccaaaatgaaatttgaaaataagttaagggatcaaagcatgtattaacccttaat 55442584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 55443610 - 55443672
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| |||||||| |||||   ||||||||||||||||||||||  || ||||||||||    
T  55443610 atagttaggggaccaaaatgaaattcgaaaataagttaagggaccaaagtatgtattaagcct 55443672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 7583526 - 7583465
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| |||||||| ||||| | ||||||||||||| ||||||||  || |||||||||    
T  7583526 atagttagtggaccaaaatgaaatccgaaaataagttaatggaccaaagcatgtattaagcc 7583465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 7820446 - 7820385
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    ||||||||||||||||| |||||    |||||||||||||||||||||  || |||||||||    
T  7820446 atagttagaggaccaaaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcc 7820385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 19579354 - 19579415
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||  |||||||| ||||| | ||||||||||||||||||||||  || |||||||||    
T  19579354 atagttaagggaccaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcc 19579415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 26798966 - 26799027
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| |||||||| | |||||  ||||||||||||| |||||||| || |||||||||    
T  26798966 atagttaggggaccaaaataaaaaccaaaaataagttaagagaccaaatgatgtattaagcc 26799027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 51401411 - 51401456
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggacca 208  Q
    |||||||| |||||||| |||||||  |||||||||||||||||||    
T  51401411 atagttaggggaccaaagtgaaaaccaaaaataagttaagggacca 51401456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 54654026 - 54654087
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||  |||||||| ||||| |  |||||||||||||||||||||| || |||||||||    
T  54654026 atagttaagggaccaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaagcc 54654087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 30838557 - 30838593
Alignment:
Q  190 aaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||||||||||||||||| || |||||||||||    
T  30838557 aaaataagttaagggaccaaatcatatattaagcctt 30838593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 43103383 - 43103419
Alignment:
Q  190 aaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||||||||||| |||||||| |||||||||||    
T  43103383 aaaataagttaagggatcaaataatatattaagcctt 43103419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 6e-56; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 9 - 224
Target Start/End: Original strand, 29658520 - 29658734
Alignment:
Q  9 gaagaaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaa 108  Q
    |||||||||||||||||||||| ||||||| ||||||| ||||| |||||||||| ||||||||||||||||||        ||||||||||||||||||    
T  29658520 gaagaaagtaaaataaatcaggcgttggtggtacacaattagatctgatagaccttatttatccaatggtctccttttttg-ggggttaaaatgaataaa 29658618  T
Q  109 ataggatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggacca 208  Q
    |||||||||||| |||||||| |||||||||||| ||| |||||  | || |||||||||||||||| |||||||||||| ||||||||||||  |||||    
T  29658619 ataggatcaaatagaatgatgaaaagaagataaaggaccaatttaaaccgtttaatagttagaggactaaattgaaaactaaaaataagttaaatgacca 29658718  T
Q  209 aataatctattaagcc 224  Q
    ||| || |||||||||    
T  29658719 aatgatgtattaagcc 29658734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 9 - 210
Target Start/End: Original strand, 22794228 - 22794428
Alignment:
Q  9 gaagaaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaa 108  Q
    |||||||  |||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||| | |||||        ||||||||||||||||||    
T  22794228 gaagaaaagaaaataaatcagatgttggtgatacacaattagatctgatagacctcatttatccaacgatctcctttttttgggggttaaaatgaataaa 22794327  T
Q  109 ataggatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggacca 208  Q
    |||||| ||||||||| ||||||| ||||||||| ||  ||||||||||| ||||||||||| |||||||||||||||| | ||||||||||||||||||    
T  22794328 ataggaccaaattgaaggatggaaggaagataaaggaacaatttggaacgtttaatagttaggggaccaaattgaaaacag-aaataagttaagggacca 22794426  T
Q  209 aa 210  Q
    ||    
T  22794427 aa 22794428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 13 - 210
Target Start/End: Complemental strand, 29657196 - 29656998
Alignment:
Q  13 aaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnngggg-ttaaaatgaataaaata 111  Q
    |||||||||||| ||||||||||||||||||||  ||||| ||||||  ||||||||||||| ||||||         |||| ||||||| |||||||||    
T  29657196 aaagtaaaataattcaggtgttggtgatacacagttagatctgatagttctcatttatccaacggtctcgttgtttttgggggttaaaattaataaaata 29657097  T
Q  112 ggatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaa 210  Q
    |||||||||||||||||||| ||| |||||| ||| ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  29657096 ggatcaaattgaatgatggagagatgataaaggaccaattttgaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggaccaaa 29656998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 16 - 225
Target Start/End: Complemental strand, 4973716 - 4973507
Alignment:
Q  16 gtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaaataggat 115  Q
    |||||||||||||  |||||||||||||||  ||||| ||||||||||||| ||||||| ||||||          ||||| |||||||||||||||||     
T  4973716 gtaaaataaatcacatgttggtgatacacagttagatatgatagacctcatctatccaacggtctcattttcttgagggttcaaatgaataaaataggac 4973617  T
Q  116 caaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatc 215  Q
    ||||||||| |||| ||||||||||||  || ||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||     
T  4973616 caaattgaacgatgaaaagaagataaagaaccaatttagaacgtttaatagttaaaggaccaaattgaaaactgaaaataagttaagggactaaataatg 4973517  T
Q  216 tattaagcct 225  Q
    ||||||||||    
T  4973516 tattaagcct 4973507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 226
Target Start/End: Original strand, 4973959 - 4974172
Alignment:
Q  13 aaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaaatag 112  Q
    |||||||||||||||| |||| |||||||||||  ||||| ||||||| ||||| ||||||| |||||||        |||||||||||||||||||| |    
T  4973959 aaagtaaaataaatcatgtgtcggtgatacacagttagatctgatagatctcatctatccaacggtctccttttcttgggggttaaaatgaataaaattg 4974058  T
Q  113 gatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaata 212  Q
    || ||||||||| |||||||||||||||||  || |||||  |||| ||||||||||   || ||||||||||| ||||||||| ||||||||| ||||     
T  4974059 gaccaaattgaacgatggaaagaagataaagaaccaatttaaaacgtttaatagttaagagatcaaattgaaaattgaaaataaattaagggactaaatg 4974158  T
Q  213 atctattaagcctt 226  Q
    ||||||||||||||    
T  4974159 atctattaagcctt 4974172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 20 - 205
Target Start/End: Complemental strand, 32893656 - 32893470
Alignment:
Q  20 aataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaaataggatcaaa 119  Q
    ||||||||| ||||||||||||||||  ||||| ||||||||| || |||||||| |||||||        ||||||||||||||||||||| || ||||    
T  32893656 aataaatcaagtgttggtgatacacagttagatctgatagaccacacttatccaacggtctccttttcttgggggttaaaatgaataaaataagaccaaa 32893557  T
Q  120 ttgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactg-aaaataagttaaggga 205  Q
    ||||||||||||||||||||||| ||  ||||| ||||| ||| ||||||   ||||||||| ||||||| ||||||||||||||||    
T  32893556 ttgaatgatggaaagaagataaaggatcaatttagaacgtttactagttaagagaccaaattaaaaactgaaaaataagttaaggga 32893470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 229
Target Start/End: Original strand, 32894713 - 32894923
Alignment:
Q  20 aataaatcaggtgttggtgatacacaact-agatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaaataggatcaa 118  Q
    ||||||| || |||||||||||||||  | | || ||||||| ||||||||||||| ||||| |         ||||| ||||||||||||||||| |||    
T  32894713 aataaataagatgttggtgatacacactttaaatctgatagatctcatttatccaacggtcttcttttcttgagggtttaaatgaataaaataggaccaa 32894812  T
Q  119 attgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctat 218  Q
    ||| |||||||| ||||||||||| ||| |||||  |||  ||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||  ||    
T  32894813 atttaatgatgggaagaagataaatgaccaatttaaaacttttaatagttagaggatcaaattgaaaattgaaaataagttaagggaccaaatgatacat 32894912  T
Q  219 taagccttaat 229  Q
    ||| |||||||    
T  32894913 taaaccttaat 32894923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 43006445 - 43006379
Alignment:
Q  159 cttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||||||| ||||||||||||||||  |||||||||||||||||||||| || ||||||||||    
T  43006445 cttaatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaagcct 43006379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 22061855 - 22061921
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagccttaat 229  Q
    |||||||| ||||||||||||||||  ||||||||||||||||| |||| || ||||||||||||||    
T  22061855 atagttaggggaccaaattgaaaacacaaaataagttaagggacaaaatgatgtattaagccttaat 22061921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 25153714 - 25153653
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| |||||||||||||||  ||||||||||||||||||||||| || |||||||||    
T  25153714 atagttaggggaccaaattgaaaatcgaaaataagttaagggaccaaatgatgtattaagcc 25153653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 7148118 - 7148180
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| ||| ||| |||||||||||    
T  7148118 atagttagatgaccaaattgaaaacagaaaataagttaagggacgaaa-aatatattaagcctt 7148180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 41126295 - 41126232
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||| |||||||| ||||| ||||||||||||||||||||||||  || |||||||||||    
T  41126295 atagttaggggaccaaaatgaaatctgaaaataagttaagggaccaaagcatgtattaagcctt 41126232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 22060519 - 22060458
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    ||||||||||||||||||| |||||  ||||||||||||| |||||||| || |||||||||    
T  22060519 atagttagaggaccaaattaaaaacacaaaataagttaagtgaccaaatgatatattaagcc 22060458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 33459603 - 33459668
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagccttaa 228  Q
    ||||||||||||||||| |||||||  ||||||||||| ||||| |||| || |||||||||||||    
T  33459603 atagttagaggaccaaaatgaaaaccaaaaataagttatgggactaaatgatgtattaagccttaa 33459668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 44114724 - 44114777
Alignment:
Q  172 ggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| |||||||| |||||||||||||||||||||| || ||||||||||    
T  44114724 ggaccaaaatgaaaactaaaaataagttaagggaccaaatgatgtattaagcct 44114777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 4858404 - 4858464
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagc 223  Q
    |||||||| ||| |||| |||||||| |||||||||||||||||||||| || ||||||||    
T  4858404 atagttaggggatcaaagtgaaaactaaaaataagttaagggaccaaatgatgtattaagc 4858464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 29408437 - 29408385
Alignment:
Q  28 aggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtct 80  Q
    |||||||||||||||||   ||||| |||||||||||||||||||||||||||    
T  29408437 aggtgttggtgatacaccgttagatctgatagacctcatttatccaatggtct 29408385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 22746380 - 22746443
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||| |||| |||||||||||  |||||||||||| |||||||||||| |||||| ||||    
T  22746380 atagttaggggactaaattgaaaacaaaaaataagttaaaggaccaaataatgtattaaacctt 22746443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 33458366 - 33458303
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    ||||||| ||||||||| |||||||  |||||||||||| ||||||||| || |||||||||||    
T  33458366 atagttaaaggaccaaaatgaaaaccaaaaataagttaaaggaccaaatgatgtattaagcctt 33458303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 222
Target Start/End: Original strand, 35128230 - 35128281
Alignment:
Q  171 aggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaag 222  Q
    |||||||||||||||||  |||||||||||||||||||||| || |||||||    
T  35128230 aggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaag 35128281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 38406074 - 38406011
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||| |||||||| |||||||  ||||||| |||| |||||||||||| |||||||||||    
T  38406074 atagttaggggaccaaaatgaaaaccaaaaataaattaaaggaccaaataatgtattaagcctt 38406011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 47536757 - 47536827
Alignment:
Q  9 gaagaaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtct 80  Q
    ||||||||||| |||| | ||||||||||||||||| | ||||| ||||||||||| ||||||||| |||||    
T  47536757 gaagaaagtaatataatt-aggtgttggtgatacaccattagatctgatagacctcttttatccaacggtct 47536827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 43007709 - 43007771
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    ||||||||||||||||||||||||   |||||||||| | ||||||||| || ||||||||||    
T  43007709 atagttagaggaccaaattgaaaatcaaaaataagttgaaggaccaaatgatatattaagcct 43007771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 43930378 - 43930316
Alignment:
Q  160 ttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaag 222  Q
    ||||||||||| |||||||| ||||||   |||||||||||||||||||||| || |||||||    
T  43930378 ttaatagttaggggaccaaagtgaaaatcaaaaataagttaagggaccaaatgatatattaag 43930316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 43936200 - 43936262
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    ||||||||||||||||| ||||| |  |||||||||||||||||||||  || ||||||||||    
T  43936200 atagttagaggaccaaaatgaaatccaaaaataagttaagggaccaaactatatattaagcct 43936262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 22744802 - 22744741
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| |||| ||||||||||   |||||||||||||||||||||| || |||||||||    
T  22744802 atagttaggggactaaattgaaaatcaaaaataagttaagggaccaaatgatgtattaagcc 22744741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 40926579 - 40926640
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| |||||||| |||||||  ||||||||||||||||| |||| || |||||||||    
T  40926579 atagttaggggaccaaagtgaaaaccaaaaataagttaagggactaaatgatgtattaagcc 40926640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 41616680 - 41616619
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| |||||||| ||||| | ||||||||||||||||||||||  || |||||||||    
T  41616680 atagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcc 41616619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 36673896 - 36673960
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctta 227  Q
    |||||||| |||||||| | ||| | ||||||||||||||||||||||  || ||||||||||||    
T  36673896 atagttaggggaccaaaataaaatccgaaaataagttaagggaccaaagcatgtattaagcctta 36673960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 210
Target Start/End: Complemental strand, 7146836 - 7146790
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaa 210  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||||||    
T  7146836 atagttaggggaccaaattgaaaacagaaaataagtt-agggaccaaa 7146790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 18802449 - 18802508
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaag 222  Q
    |||||||| ||| |||| |||||||  |||||||||||||||||||||| || |||||||    
T  18802449 atagttaggggatcaaaatgaaaacaaaaaataagttaagggaccaaatgatgtattaag 18802508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 19279672 - 19279719
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaa 210  Q
    |||||||| |||||||| |||||||  |||||||||||||||||||||    
T  19279672 atagttaggggaccaaagtgaaaaccaaaaataagttaagggaccaaa 19279719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 29409154 - 29409217
Alignment:
Q  19 aaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctcc 82  Q
    |||||||| |||||||||| ||||||   ||||| ||||||| ||||||||||||| |||||||    
T  29409154 aaataaattaggtgttggttatacactgttagatctgatagatctcatttatccaacggtctcc 29409217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 30224036 - 30224083
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaa 210  Q
    |||||||| |||||||| ||||| | ||||||||||||||||||||||    
T  30224036 atagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa 30224083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 34558361 - 34558408
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaa 210  Q
    |||||||| |||||||| ||||| | ||||||||||||||||||||||    
T  34558361 atagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa 34558408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 35480263 - 35480201
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||| |||||||| ||||| | ||||||||||||||||||||||  || |||||||||||    
T  35480263 atagttag-ggaccaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcctt 35480201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 210
Target Start/End: Complemental strand, 38001560 - 38001513
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaa 210  Q
    ||||||||||||||||| |||||   ||||||||||||||||||||||    
T  38001560 atagttagaggaccaaaatgaaattcgaaaataagttaagggaccaaa 38001513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 38408334 - 38408393
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaag 222  Q
    ||||||||||||||||| ||||||   ||||||| |||||||||||||| || |||||||    
T  38408334 atagttagaggaccaaagtgaaaatcaaaaataaattaagggaccaaatgatatattaag 38408393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 210
Target Start/End: Complemental strand, 43935241 - 43935194
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaa 210  Q
    ||||||||||||||||| ||||| |  |||||||||||||||||||||    
T  43935241 atagttagaggaccaaaatgaaatccaaaaataagttaagggaccaaa 43935194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 46674994 - 46675057
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||  ||| ||||||||||||  |||||||||||||||| ||||| || |||||||||||    
T  46674994 atagttaagggatcaaattgaaaaccaaaaataagttaagggatcaaatgatgtattaagcctt 46675057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 2904107 - 2904169
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| |||||||| |||||  ||||||||| |||||||||||||  || ||||||||||    
T  2904107 atagttaggggaccaaaatgaaatttgaaaataaattaagggaccaaagcatgtattaagcct 2904169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 25154996 - 25155054
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaa 221  Q
    |||||||  ||| ||||||||||||  |||||||||||||||||||||| || ||||||    
T  25154996 atagttaagggatcaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaa 25155054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 224
Target Start/End: Original strand, 35045886 - 35046015
Alignment:
Q  95 ttaaaatgaataaaataggatcaaattgaatgatggaaa-gaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaa 193  Q
    ||||||| |||||||||||||||||||| |||||  |||  |||||||| ||| | |||| |||| |||||||||||| |||||| | ||||     ||     
T  35045886 ttaaaattaataaaataggatcaaattg-atgattaaaacaaagataaatgaccattttgaaacgtttaatagttagaagaccaattcgaaataaagaat 35045984  T
Q  194 taagttaagggaccaaataatctattaagcc 224  Q
    |||||||| ||||||||| ||| ||||||||    
T  35045985 taagttaatggaccaaatgatcaattaagcc 35046015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 41127231 - 41127293
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| |||||||| ||||| | ||||||||||||||||| ||||  || ||||||||||    
T  41127231 atagttaggggaccaaaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 41127293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 43704484 - 43704574
Alignment:
Q  135 aagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| ||| | |||| |||| ||||||||||| ||||||| | |||||    || |||||||||||||||||| ||| |||||||||    
T  43704484 aagataaaggaccattttgaaacgtttaatagttaggggaccaattcgaaaaaaataattaagttaagggaccaaatgatcaattaagcct 43704574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 4857257 - 4857200
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctatta 220  Q
    |||||||| |||||||| |||||||  |||||||||||||||| ||||| || |||||    
T  4857257 atagttaggggaccaaagtgaaaaccaaaaataagttaagggatcaaatgatgtatta 4857200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 21171548 - 21171593
Alignment:
Q  165 agttagaggaccaaattgaaaactgaaaataagttaagggaccaaa 210  Q
    |||||| |||||||||||||| |  |||||||||||||||||||||    
T  21171548 agttaggggaccaaattgaaatccaaaaataagttaagggaccaaa 21171593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 26407464 - 26407524
Alignment:
Q  164 tagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||||||||||| ||||| | ||||||| ||||||||||| ||| || ||||||||||    
T  26407464 tagttagaggaccaaactgaaa-cagaaaatatgttaagggaccgaatgatgtattaagcct 26407524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 38002574 - 38002635
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||  |||||||| ||||| |||||||||||||||| |||||||  || |||||||||    
T  38002574 atagttaagggaccaaaatgaaatctgaaaataagttaagagaccaaagcatgtattaagcc 38002635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 43931923 - 43931988
Alignment:
Q  160 ttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||||||||||||| | ||||||   ||||||| |||||| ||||||| || ||||||||||    
T  43931923 ttaatagttagaggaccagagtgaaaataaaaaataaattaaggaaccaaatgatgtattaagcct 43931988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 13446729 - 13446781
Alignment:
Q  174 accaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||| |||||||  ||||||||||||| |||||||| || |||||||||||    
T  13446729 accaaagtgaaaaccaaaaataagttaagtgaccaaatgatgtattaagcctt 13446781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 14109129 - 14109177
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaat 211  Q
    |||||||  |||||||| |||||| | ||||||||||||||||||||||    
T  14109129 atagttaagggaccaaagtgaaaattaaaaataagttaagggaccaaat 14109177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 14419086 - 14419134
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaat 211  Q
    |||||||  |||||||| |||||| | ||||||||||||||||||||||    
T  14419086 atagttaagggaccaaagtgaaaattaaaaataagttaagggaccaaat 14419134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 19278400 - 19278348
Alignment:
Q  172 ggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| ||||| |  |||||||||||||||||||||| || |||||||||    
T  19278400 ggaccaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaagcc 19278348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 21171349 - 21171289
Alignment:
Q  165 agttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||| ||||||||||||||    |||||||||||||||||||||  || ||||||||||    
T  21171349 agttaggggaccaaattgaaattcaaaaataagttaagggaccaaagcatgtattaagcct 21171289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 36702824 - 36702772
Alignment:
Q  172 ggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| ||||| || |||||||||||||||||||||  || |||||||||    
T  36702824 ggaccaaaatgaaatctaaaaataagttaagggaccaaagcatgtattaagcc 36702772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 45721826 - 45721866
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagg 203  Q
    |||||||| |||||||| |||||||| ||||||||||||||    
T  45721826 atagttaggggaccaaaatgaaaactaaaaataagttaagg 45721866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 48672846 - 48672898
Alignment:
Q  174 accaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||| |||||  ||||||| ||||| ||||||||||| |||||||||||    
T  48672846 accaaattaaaaacaaaaaataaattaagagaccaaataatgtattaagcctt 48672898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 93; Significance: 3e-45; HSPs: 3)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 13 - 229
Target Start/End: Complemental strand, 35568 - 35353
Alignment:
Q  13 aaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaaatag 112  Q
    |||||||||||||| ||||||||||||||||||  ||||| ||||| |||||||||||||||||||||||        || ||||||||||||||||||     
T  35568 aaagtaaaataaattaggtgttggtgatacacagttagatctgataaacctcatttatccaatggtctcctttttatgggtgttaaaatgaataaaatat 35469  T
Q  113 gatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaata 212  Q
    || ||| |||||| ||||||||||||||||  || |||||  |||| ||||||||||||||||||||||  |||  ||||||||| ||||||| |||||     
T  35468 gaccaa-ttgaataatggaaagaagataaagaaccaatttaaaacgtttaatagttagaggaccaaattataaatagaaaataaggtaagggaacaaatg 35370  T
Q  213 atctattaagccttaat 229  Q
    || ||||||||||||||    
T  35369 atatattaagccttaat 35353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 94 - 223
Target Start/End: Original strand, 36737 - 36866
Alignment:
Q  94 gttaaaatgaataaaataggatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaa 193  Q
    |||||||| |||||||||  | ||||||||||||||||||||||||||| ||| |||||| |||  ||||||| ||   ||||||||||||||| |||||    
T  36737 gttaaaattaataaaataacaccaaattgaatgatggaaagaagataaaagactaatttgaaacatttaataggtaagagaccaaattgaaaacagaaaa 36836  T
Q  194 taagttaagggaccaaataatctattaagc 223  Q
    |||||||||  |||| || || ||||||||    
T  36837 taagttaagtaaccatatgatgtattaagc 36866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 36625 - 36689
Alignment:
Q  16 gtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtct 80  Q
    ||||||| ||| ||| || |||||||||||  ||||| ||||||||||||||||||||| |||||    
T  36625 gtaaaattaattaggcgtgggtgatacacagttagatctgatagacctcatttatccaacggtct 36689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 86; Significance: 5e-41; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 92 - 209
Target Start/End: Original strand, 98670 - 98787
Alignment:
Q  92 gggttaaaatgaataaaataggatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaa 191  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||  || ||||| ||||| |||||||| |||||||||||||||||||||||    
T  98670 gggttaaactgaataaaataggaccaaattgaatgatggaaagaagataaagaaccaatttagaacgtttaatagtcagaggaccaaattgaaaactgaa 98769  T
Q  192 aataagttaagggaccaa 209  Q
    ||||||||||||||||||    
T  98770 aataagttaagggaccaa 98787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 93 - 229
Target Start/End: Complemental strand, 98175 - 98039
Alignment:
Q  93 ggttaaaatgaataaaataggatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaa 192  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||| ||| ||||| ||||| |||||||| |    | |||||||||||||||||    
T  98175 ggttaaaatgaataaaataggaccaaattgaatgatgaaaagaagataaaggaccaatttagaacgtttaatagtaaagacatcaaattgaaaactgaaa 98076  T
Q  193 ataagttaagggaccaaataatctattaagccttaat 229  Q
    ||||||||||||| ||||| || ||||||||||||||    
T  98075 ataagttaagggatcaaatgatgtattaagccttaat 98039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 2e-34; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 9 - 203
Target Start/End: Complemental strand, 12364400 - 12364206
Alignment:
Q  9 gaagaaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaa 108  Q
    |||||||  ||||||||| | ||||||||||||||||  ||||| |||||||||||||||||||||||||| ||        ||||||||||| ||| ||    
T  12364400 gaagaaaagaaaataaattatgtgttggtgatacacagttagatctgatagacctcatttatccaatggtcccctttttttgggggttaaaataaattaa 12364301  T
Q  109 ataggatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagg 203  Q
    |||||| ||||||||| ||  ||||||||||||| ||| |||||  |||| |||||||||||| || |||||| ||||| |||||||| ||||||    
T  12364300 ataggaccaaattgaaggactgaaagaagataaatgaccaatttaaaacgtttaatagttagatgatcaaattaaaaacagaaaataaattaagg 12364206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 12365924 - 12366055
Alignment:
Q  9 gaagaaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnnggggttaaaatgaataaa 108  Q
    |||||||  ||||||||||||||||||||||||||||  || || ||||||| ||||||||||||| |||||||        ||||||||||||||||||    
T  12365924 gaagaaaagaaaataaatcaggtgttggtgatacacagttatatctgatagatctcatttatccaacggtctccattttg--ggggttaaaatgaataaa 12366021  T
Q  109 ataggatcaaattgaatgatggaaagaagataaa 142  Q
    |||||| ||||||||||||||||||||| |||||    
T  12366022 ataggaccaaattgaatgatggaaagaatataaa 12366055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 20921702 - 20921544
Alignment:
Q  28 aggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctccnnnnnnnng-gggttaaaatgaataaaataggatcaaattgaatg 126  Q
    |||||||||||||| |||  ||||| |||||||||||||||||||||  ||||||          ||||||||||||||||||||||| |||||||||||    
T  20921702 aggtgttggtgatatacagttagatatgatagacctcatttatccaacagtctcctttttttttagggttaaaatgaataaaataggaccaaattgaatg 20921603  T
Q  127 atggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaa 185  Q
    ||||||||||||| || ||| |||||| |||| |||||| |||| ||||||| ||||||    
T  20921602 atggaaagaagatcaaggaccaatttgaaacgtttaatatttaggggaccaatttgaaa 20921544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 20921552 - 20921475
Alignment:
Q  148 aatttggaacgcttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||| |||| |||||| |||| ||||||||||||||| ||||||||| |||| ||||||||| || ||||||||||    
T  20921552 aatttgaaacgtttaatatttaggggaccaaattgaaaattgaaaataaattaaaggaccaaatgatatattaagcct 20921475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 370976 - 370906
Alignment:
Q  9 gaagaaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtct 80  Q
    ||||||||||| |||| | ||||||||||||||||| | ||||| ||||||||||||||||||||| |||||    
T  370976 gaagaaagtaatataatt-aggtgttggtgatacaccattagatttgatagacctcatttatccaacggtct 370906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 3665280 - 3665218
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    ||||||||||||||||| ||||| | ||||||||||||||||||||||  || ||||||||||    
T  3665280 atagttagaggaccaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcct 3665218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 37867812 - 37867751
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| ||| ||||||||||||  |||||||||||||||||||||| || |||||||||    
T  37867812 atagttaggggatcaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaagcc 37867751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 23178942 - 23178990
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaat 211  Q
    |||||||| |||||||| |||||||| ||||||||||||||||||||||    
T  23178942 atagttaggggaccaaagtgaaaactaaaaataagttaagggaccaaat 23178990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 23590199 - 23590247
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaat 211  Q
    |||||||| |||||||| |||||||| ||||||||||||||||||||||    
T  23590199 atagttaggggaccaaagtgaaaactaaaaataagttaagggaccaaat 23590247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 28108892 - 28108820
Alignment:
Q  164 tagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagccttaatcatttga 236  Q
    |||||||||||||||| ||||||  ||||||||||||||||||| ||| || |||| |||||| | |||||||    
T  28108892 tagttagaggaccaaactgaaaatagaaaataagttaagggaccgaatgatgtattgagcctttaacatttga 28108820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 42596619 - 42596555
Alignment:
Q  160 ttaatagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    ||||||||||| |||||||| | ||||  ||||||||||||||||||||||| || |||||||||    
T  42596619 ttaatagttaggggaccaaaataaaaaacgaaaataagttaagggaccaaatgatgtattaagcc 42596555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 37869100 - 37869163
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||  |||||||||||||||   ||||||||||||||||||||| ||| |||||||||||    
T  37869100 atagttaagggaccaaattgaaaatcaaaaataagttaagggaccaaacaatatattaagcctt 37869163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 33837815 - 33837877
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| |||||||| | ||| ||||||||||||||||||||||||  || ||||||||||    
T  33837815 atagttaggggaccaaaataaaatctgaaaataagttaagggaccaaaacatgtattaagcct 33837877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 28109939 - 28109988
Alignment:
Q  173 gaccaaattgaaaactgaaaataagttaagggaccaaataatctattaag 222  Q
    |||||||||||||||  |||||||||||||||||||||| || |||||||    
T  28109939 gaccaaattgaaaacgaaaaataagttaagggaccaaatcatatattaag 28109988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 42027248 - 42027187
Alignment:
Q  164 tagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||||||||||| ||||||   |||||||||||||||||||||  || ||||||||||    
T  42027248 tagttagaggaccaaaatgaaaatcaaaaataagttaagggaccaaacgatgtattaagcct 42027187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 42029018 - 42029079
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    ||||||||| ||||||| |||||||  |||||| ||||||||||||||| || |||||||||    
T  42029018 atagttagatgaccaaaatgaaaaccaaaaatacgttaagggaccaaatgatgtattaagcc 42029079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 29424672 - 29424736
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctta 227  Q
    |||||||| |||||||  | |||||  ||||||||||||||||||||| ||| ||||||||||||    
T  29424672 atagttaggggaccaatgtaaaaaccaaaaataagttaagggaccaaacaatgtattaagcctta 29424736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 3666328 - 3666390
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||  |||||||| ||||| | ||||||||||||||||||||||| || |||||||||||    
T  3666328 atagttatgggaccaaaatgaaatccgaaaataagttaagggaccaaattat-tattaagcctt 3666390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 4630144 - 4630187
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggac 206  Q
    |||||||| |||||||| ||||| ||||||||||||||||||||    
T  4630144 atagttaggggaccaaaatgaaatctgaaaataagttaagggac 4630187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 11575515 - 11575578
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||| |||||||| | |||||  |||||||||||| ||||||||| || |||||||||||    
T  11575515 atagttaggggaccaaaattaaaaccaaaaataagttaatggaccaaatgatgtattaagcctt 11575578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 201
Target Start/End: Complemental strand, 1257613 - 1257507
Alignment:
Q  95 ttaaaatgaataaaataggatcaaattgaatgatggaaagaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaactgaaaat 194  Q
    |||||||||||||||||| | || || |||| ||| |||||||||||| ||  |||||  || | |||||||| |  |||  ||||||||||| ||||||    
T  1257613 ttaaaatgaataaaatagaaccacatcgaataatgaaaagaagataaatgatcaatttaaaatgtttaatagtcaagggataaaattgaaaaccgaaaat 1257514  T
Q  195 aagttaa 201  Q
    |||||||    
T  1257513 aagttaa 1257507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 6706982 - 6706920
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| |||||||| ||||| |  |||||||||||||||||||||  || ||||||||||    
T  6706982 atagttaggggaccaaaatgaaatccaaaaataagttaagggaccaaagcatgtattaagcct 6706920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 7038392 - 7038454
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||  |||||||| ||||| |  |||||||||||||||||||||| || ||||||||||    
T  7038392 atagttaagggaccaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaagcct 7038454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 32614441 - 32614379
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| |||||||| ||||||   |||||||| ||||||||||||| || ||||||||||    
T  32614441 atagttaggggaccaaaatgaaaaaataaaataagctaagggaccaaatgatatattaagcct 32614379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 41312556 - 41312494
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||||||| |||| ||||| | ||||||||||||| ||||||||  || ||||||||||    
T  41312556 atagttagaggaacaaaatgaaatccgaaaataagttaatggaccaaagcatgtattaagcct 41312494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 1257622 - 1257671
Alignment:
Q  172 ggaccaaattgaaaactgaaaa-taagttaagggaccaaataatctatta 220  Q
    |||||||||| ||||||||||| ||| ||||||||||||||||| |||||    
T  1257622 ggaccaaattaaaaactgaaaaataaattaagggaccaaataatatatta 1257671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 12854164 - 12854225
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||  |||||||| ||||| || |||||||||||||||||||||  || |||||||||    
T  12854164 atagttaagggaccaaaatgaaatctaaaaataagttaagggaccaaagcatgtattaagcc 12854225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 30202945 - 30202990
Alignment:
Q  165 agttagaggaccaaattgaaaactgaaaataagttaagggaccaaa 210  Q
    |||||| |||||||||||||| |  |||||||||||||||||||||    
T  30202945 agttaggggaccaaattgaaatccaaaaataagttaagggaccaaa 30202990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 34147186 - 34147133
Alignment:
Q  172 ggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| |||||||||||||| | || ||||||||||| | |||||||||||    
T  34147186 ggaccaaaatgaaaactgaaaattatttgagggaccaaatgacctattaagcct 34147133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 186
Target Start/End: Original strand, 371959 - 372050
Alignment:
Q  95 ttaaaatgaataaaataggatcaaattgaatgatggaaa-gaagataaacgacaaatttggaacgcttaatagttagaggaccaaattgaaaa 186  Q
    ||||||| |||||||||||||||||||| |||||| |||  |||||||| ||  || ||| |||| ||||||||||| |||| || |||||||    
T  371959 ttaaaattaataaaataggatcaaattg-atgatgaaaacaaagataaaggatcaaattgaaacgtttaatagttaggggactaatttgaaaa 372050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 23177720 - 23177668
Alignment:
Q  172 ggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| |||||||  ||||||| |||||||||||||| || |||||||||    
T  23177720 ggaccaaaatgaaaaccaaaaataaattaagggaccaaatgatgtattaagcc 23177668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 23588977 - 23588925
Alignment:
Q  172 ggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcc 224  Q
    |||||||| |||||||  ||||||| |||||||||||||| || |||||||||    
T  23588977 ggaccaaaatgaaaaccaaaaataaattaagggaccaaatgatgtattaagcc 23588925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 35061381 - 35061437
Alignment:
Q  172 ggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagccttaa 228  Q
    |||||||| ||||||||  |||| | |||||||||||||| | ||||||||||||||    
T  35061381 ggaccaaaatgaaaacttcaaattaattaagggaccaaatgacctattaagccttaa 35061437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 96216 - 96154
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| |||||||||||||||  ||||||||||||| ||||||||| || ||||||||||    
T  96216 atagttaggggaccaaattgaaaatcgaaaataagttaatggaccaaatgatgtattaagcct 96154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 96878 - 96937
Alignment:
Q  166 gttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    ||||| ||| ||||||||||||  |||||||||||||||| ||||| || ||||||||||    
T  96878 gttaggggatcaaattgaaaaccaaaaataagttaagggatcaaatgatgtattaagcct 96937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 23462 - 23397
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagccttaa 228  Q
    |||||||| |||||||| |||||||  ||||||||||||||||||| || || |||||||||||||    
T  23462 atagttaggggaccaaactgaaaaccaaaaataagttaagggaccatatgatgtattaagccttaa 23397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 24879 - 24939
Alignment:
Q  167 ttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctta 227  Q
    |||| |||||||| |||||||  ||||||| |||||||||||||  || ||||||||||||    
T  24879 ttaggggaccaaactgaaaaccaaaaataaattaagggaccaaacgatgtattaagcctta 24939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 688 - 750
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| |||||||| ||| |||  |||||||||||||||||||||| || ||||||||||    
T  688 atagttaggggaccaaagtgataacaaaaaataagttaagggaccaaatgatgtattaagcct 750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 586 - 524
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| |||||||| ||| |||  |||||||||||||||||||||| || ||||||||||    
T  586 atagttaggggaccaaagtgataacaaaaaataagttaagggaccaaatgatgtattaagcct 524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 9538 - 9600
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| |||||||| ||| |||  |||||||||||||||||||||| || ||||||||||    
T  9538 atagttaggggaccaaagtgataacaaaaaataagttaagggaccaaatgatgtattaagcct 9600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 8435 - 8372
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||| ||| |||| |||||||  |||||||||||||||||||||| ||  ||||||||||    
T  8435 atagttaggggagcaaagtgaaaaccaaaaataagttaagggaccaaatgatggattaagcctt 8372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 1807 - 1747
Alignment:
Q  167 ttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctta 227  Q
    |||| |||||||| ||||| | ||||||||||||||||||||||  || ||||||||||||    
T  1807 ttaggggaccaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcctta 1747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 2329 - 2388
Alignment:
Q  167 ttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||| |||||||| |||||||  |||||||||||||||||||||  || |||||||||||    
T  2329 ttaggggaccaaaatgaaaaccaaaaataagttaagggaccaaagcatgtattaagcctt 2388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 73049 - 73108
Alignment:
Q  166 gttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    ||||| |||||||| |||||||  ||||||||||||||||| |||| || ||||||||||    
T  73049 gttaggggaccaaagtgaaaaccaaaaataagttaagggactaaatgatgtattaagcct 73108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2127 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 575 - 637
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    |||||||| ||||| ||||||||||  |||||||||||| ||| ||||| || ||||||||||    
T  575 atagttaggggacctaattgaaaaccaaaaataagttaatggatcaaatgatgtattaagcct 637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 128656 - 128710
Alignment:
Q  171 aggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaagcct 225  Q
    ||||||||| |||||||| ||||| | |||||||||||||| | |||||||||||    
T  128656 aggaccaaaatgaaaacttaaaattaattaagggaccaaatgacctattaagcct 128710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 48516 - 48574
Alignment:
Q  163 atagttagaggaccaaattgaaaactgaaaataagttaagggaccaaataatctattaa 221  Q
    ||||||| ||||||||| ||||| |  |||||||||||||||||||||| || ||||||    
T  48516 atagttaaaggaccaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaa 48574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 1034 - 1103
Alignment:
Q  13 aaagtaaaataaatcaggtgttggtgatacacaactagatgtgatagacctcatttatccaatggtctcc 82  Q
    ||||||||||||||  ||||||||||||||||   ||||| ||||| || |||||||| ||| |||||||    
T  1034 aaagtaaaataaatttggtgttggtgatacacggttagatctgatatacttcatttattcaacggtctcc 1103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 54 - 18
Alignment:
Q  190 aaaataagttaagggaccaaataatctattaagcctt 226  Q
    |||||||||||||||||||||| || |||||||||||    
T  54 aaaataagttaagggaccaaatcatgtattaagcctt 18  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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