View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10201A_low_352 (Length: 201)
Name: NF10201A_low_352
Description: NF10201A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10201A_low_352 |
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Alignment Details
Target: chr2 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 6111321 - 6111149
Alignment:
| Q |
16 |
agtttggtgttccattttccttccttgtaggtagcagcagtatttcgcaagtctctaaggcttactcacgaagcgcgaaaacaatttgcatctggaaaaa |
115 |
Q |
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| T |
6111321 |
agtttggtgttccattttccttccttgtaggtagcagcagtatttcgcaagtctctaaggcttactcacgaagcgcgaaaacaatttgcatctggaaaaa |
6111222 |
T |
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| Q |
116 |
taaccaacttgatgactactgatgctgagtcacttcaggtatggttttcctttcctccctatcatctgatgtc |
188 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6111221 |
taaccaacttgatgactactgatgctgagtcacttcaggtatggttttcctttcctccctatcatctgatgtc |
6111149 |
T |
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