View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10201A_low_9 (Length: 455)
Name: NF10201A_low_9
Description: NF10201A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10201A_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 442; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 442; E-Value: 0
Query Start/End: Original strand, 5 - 450
Target Start/End: Complemental strand, 683232 - 682787
Alignment:
| Q |
5 |
gcatagatatattttgtgacttcatagccacaattttccattccaacttctttcaacatattctttttgccatatttacaattcaagtatctttttgagt |
104 |
Q |
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| T |
683232 |
gcatagatatattttgtgacttcatagccacaattttccattccaacttctttcaacatattctttttgccatatttacaattcaagtatctttttgagt |
683133 |
T |
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| Q |
105 |
ttgtatcaagatcaaaggctttgtaagaagatgtaacaaactctccatatcgaattatctcttcgcgaagaatagggtgtaaagggtttaaaagattttc |
204 |
Q |
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| T |
683132 |
ttgtatcaagatcaaaggctttgtaagaagatgtaacaaactctccatatcgaattatctcttcgcgaagaatagggtgtaaagggtttaaaagattttc |
683033 |
T |
|
| Q |
205 |
ccagttgttgcacccttgaatctctctccaaatatttgctaaatgttttgtagtagttatagtagtagaagaagtggaaattttgtgtgtgattttttgt |
304 |
Q |
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| T |
683032 |
ccagttgttgcacccttgaatctctctccaaatatttgctaaatgttttgtagtagttatagtagtagaagaagtggaaattttgtgtgtgattttttgt |
682933 |
T |
|
| Q |
305 |
gtctgtttaggagtaatggaggtgctaatagtattagtgtatatgttgttattgttgttggtggtggtgggaaggatgatttctagtaaagctgaatttg |
404 |
Q |
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| T |
682932 |
gtgtgtttaggagtaatggaggtgctaatagtattagtgtatatgttgttattgttgttggtggtggtgggaaggatgatttctagtaaagctgaatttg |
682833 |
T |
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| Q |
405 |
atgctacaattgatgacttcaaagaaggagacaagtgattgttatt |
450 |
Q |
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| T |
682832 |
atgctacaattgatgacttcaaagaaggagacaagtgattgttatt |
682787 |
T |
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