View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10201_high_2 (Length: 478)

Name: NF10201_high_2
Description: NF10201
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10201_high_2
NF10201_high_2
[»] chr3 (73 HSPs)
chr3 (264-460)||(35341636-35341829)
chr3 (55-186)||(19984850-19984981)
chr3 (35-186)||(12700176-12700325)
chr3 (46-186)||(46719942-46720082)
chr3 (46-186)||(46721180-46721320)
chr3 (35-186)||(47614186-47614337)
chr3 (60-186)||(534500-534626)
chr3 (46-184)||(47610540-47610678)
chr3 (60-184)||(54986981-54987103)
chr3 (60-186)||(22776786-22776912)
chr3 (35-186)||(12703449-12703599)
chr3 (47-186)||(29932660-29932798)
chr3 (47-186)||(29981814-29981952)
chr3 (46-186)||(47609698-47609838)
chr3 (36-186)||(7758403-7758553)
chr3 (60-184)||(7267647-7267770)
chr3 (70-186)||(54540774-54540890)
chr3 (36-186)||(8456479-8456628)
chr3 (75-186)||(19986059-19986172)
chr3 (60-186)||(49216248-49216374)
chr3 (36-184)||(23770357-23770505)
chr3 (46-186)||(51469973-51470113)
chr3 (35-186)||(8875907-8876058)
chr3 (47-182)||(23769862-23769996)
chr3 (60-182)||(6250551-6250672)
chr3 (60-186)||(54539756-54539882)
chr3 (60-169)||(6171217-6171324)
chr3 (60-160)||(31645000-31645100)
chr3 (46-186)||(51470415-51470554)
chr3 (58-184)||(52104484-52104606)
chr3 (84-186)||(29931227-29931329)
chr3 (84-186)||(29980381-29980483)
chr3 (35-184)||(51347271-51347420)
chr3 (35-163)||(6249633-6249760)
chr3 (110-186)||(28262194-28262269)
chr3 (110-186)||(28263135-28263211)
chr3 (39-163)||(34019098-34019222)
chr3 (110-186)||(51038814-51038890)
chr3 (110-186)||(52276305-52276381)
chr3 (110-186)||(52281571-52281647)
chr3 (111-186)||(51037537-51037611)
chr3 (60-186)||(11671315-11671440)
chr3 (60-125)||(784921-784986)
chr3 (110-186)||(18442631-18442708)
chr3 (110-186)||(18456087-18456164)
chr3 (110-186)||(19487705-19487782)
chr3 (36-184)||(40426728-40426877)
chr3 (92-186)||(535788-535882)
chr3 (110-184)||(7268851-7268924)
chr3 (93-183)||(24516464-24516554)
chr3 (35-103)||(47615526-47615594)
chr3 (110-174)||(55192019-55192083)
chr3 (131-186)||(47615593-47615648)
chr3 (112-186)||(5001201-5001275)
chr3 (130-186)||(3329060-3329116)
chr3 (130-186)||(48907538-48907594)
chr3 (60-128)||(52105641-52105709)
chr3 (110-186)||(53614820-53614896)
chr3 (111-186)||(5029708-5029782)
chr3 (133-180)||(22775783-22775829)
chr3 (111-186)||(52839038-52839113)
chr3 (92-186)||(52840610-52840704)
chr3 (127-184)||(39843054-39843111)
chr3 (114-186)||(53901416-53901486)
chr3 (130-186)||(1743496-1743552)
chr3 (111-163)||(6170296-6170348)
chr3 (130-186)||(8338941-8338997)
chr3 (138-186)||(13080895-13080943)
chr3 (130-186)||(20001955-20002010)
chr3 (130-186)||(25179579-25179635)
chr3 (130-174)||(26628272-26628316)
chr3 (130-186)||(28173730-28173786)
chr3 (131-179)||(49002759-49002807)
[»] chr1 (61 HSPs)
chr1 (20-186)||(51685699-51685865)
chr1 (46-186)||(51684367-51684507)
chr1 (35-186)||(36613853-36614004)
chr1 (55-186)||(45157178-45157308)
chr1 (60-184)||(40384727-40384852)
chr1 (55-184)||(39153085-39153214)
chr1 (35-186)||(43059955-43060106)
chr1 (46-186)||(52827348-52827488)
chr1 (46-184)||(52828030-52828168)
chr1 (55-184)||(39151934-39152063)
chr1 (75-186)||(23980455-23980566)
chr1 (35-186)||(36612854-36613004)
chr1 (36-186)||(39222423-39222574)
chr1 (36-186)||(11437149-11437299)
chr1 (46-184)||(24426035-24426173)
chr1 (84-186)||(35067000-35067102)
chr1 (60-186)||(45148582-45148707)
chr1 (60-186)||(52274969-52275095)
chr1 (60-184)||(45149944-45150068)
chr1 (46-182)||(46066530-46066663)
chr1 (49-186)||(35595155-35595293)
chr1 (36-186)||(11436043-11436193)
chr1 (60-186)||(35594218-35594342)
chr1 (35-184)||(50680335-50680483)
chr1 (70-185)||(31194057-31194170)
chr1 (95-186)||(11190386-11190477)
chr1 (60-186)||(24422801-24422927)
chr1 (38-184)||(37526830-37526975)
chr1 (46-184)||(52276123-52276261)
chr1 (105-186)||(14999286-14999366)
chr1 (110-186)||(12390005-12390081)
chr1 (46-186)||(41364830-41364969)
chr1 (60-184)||(43058789-43058912)
chr1 (36-184)||(43378663-43378810)
chr1 (35-186)||(25652716-25652866)
chr1 (71-186)||(33088602-33088717)
chr1 (60-186)||(39699741-39699866)
chr1 (55-184)||(45156052-45156181)
chr1 (111-186)||(16290094-16290170)
chr1 (60-184)||(30249464-30249588)
chr1 (35-186)||(50681557-50681704)
chr1 (35-99)||(39221402-39221466)
chr1 (46-186)||(41366091-41366230)
chr1 (130-185)||(28552307-28552362)
chr1 (60-186)||(39698564-39698689)
chr1 (60-186)||(44404443-44404569)
chr1 (109-186)||(7674529-7674604)
chr1 (77-186)||(7675450-7675558)
chr1 (60-149)||(44411940-44412029)
chr1 (70-186)||(2940267-2940382)
chr1 (56-164)||(33088090-33088198)
chr1 (60-145)||(30248155-30248238)
chr1 (130-186)||(3616800-3616856)
chr1 (130-186)||(4059523-4059579)
chr1 (130-186)||(4059769-4059825)
chr1 (130-186)||(28920898-28920954)
chr1 (130-186)||(29182002-29182058)
chr1 (130-186)||(46432217-46432273)
chr1 (130-186)||(46432463-46432519)
chr1 (115-167)||(46573069-46573121)
chr1 (130-186)||(48471864-48471920)
[»] chr4 (56 HSPs)
chr4 (264-460)||(44184855-44185048)
chr4 (264-460)||(10420685-10420878)
chr4 (46-186)||(25685782-25685922)
chr4 (55-186)||(10448229-10448360)
chr4 (35-184)||(12129626-12129775)
chr4 (55-186)||(10447007-10447139)
chr4 (46-164)||(37728525-37728643)
chr4 (46-186)||(10471348-10471488)
chr4 (46-186)||(13509319-13509458)
chr4 (60-186)||(50909646-50909773)
chr4 (36-186)||(1290148-1290298)
chr4 (49-186)||(1834120-1834258)
chr4 (60-186)||(1835076-1835202)
chr4 (46-186)||(25684935-25685075)
chr4 (70-186)||(31600969-31601085)
chr4 (60-186)||(3927667-3927793)
chr4 (46-186)||(13386015-13386157)
chr4 (60-182)||(31599794-31599916)
chr4 (70-186)||(3928842-3928958)
chr4 (46-186)||(5525361-5525500)
chr4 (46-186)||(5526086-5526225)
chr4 (111-186)||(1963197-1963272)
chr4 (47-186)||(48781007-48781145)
chr4 (64-186)||(48780249-48780371)
chr4 (46-186)||(13386492-13386633)
chr4 (49-186)||(49307991-49308126)
chr4 (46-186)||(10470547-10470687)
chr4 (35-184)||(8155741-8155889)
chr4 (60-186)||(21177998-21178123)
chr4 (92-186)||(26421628-26421721)
chr4 (46-186)||(1964401-1964541)
chr4 (110-186)||(17382994-17383069)
chr4 (110-186)||(17388235-17388310)
chr4 (69-185)||(19750558-19750673)
chr4 (69-185)||(19789133-19789248)
chr4 (60-184)||(35935507-35935631)
chr4 (93-184)||(8758844-8758935)
chr4 (36-184)||(1289100-1289248)
chr4 (46-163)||(46638685-46638802)
chr4 (92-186)||(8757676-8757769)
chr4 (60-186)||(49306776-49306900)
chr4 (60-186)||(52491581-52491707)
chr4 (110-184)||(55603555-55603628)
chr4 (46-163)||(37727721-37727837)
chr4 (79-184)||(35934347-35934450)
chr4 (111-184)||(55602379-55602451)
chr4 (130-186)||(18259358-18259414)
chr4 (130-177)||(9195909-9195956)
chr4 (86-184)||(27257960-27258057)
chr4 (55-97)||(54107949-54107991)
chr4 (80-177)||(21539065-21539162)
chr4 (139-179)||(13209724-13209764)
chr4 (110-186)||(20919336-20919411)
chr4 (131-163)||(23759831-23759863)
chr4 (138-186)||(41877279-41877327)
chr4 (110-162)||(46637706-46637758)
[»] chr7 (43 HSPs)
chr7 (60-186)||(21505417-21505541)
chr7 (35-186)||(7501801-7501952)
chr7 (35-186)||(18371425-18371576)
chr7 (46-186)||(3227554-3227694)
chr7 (46-186)||(47525327-47525467)
chr7 (35-186)||(7500456-7500606)
chr7 (46-185)||(17781663-17781802)
chr7 (37-186)||(22629484-22629636)
chr7 (46-186)||(127338-127476)
chr7 (46-186)||(22630412-22630552)
chr7 (46-186)||(31949323-31949463)
chr7 (46-186)||(31949762-31949902)
chr7 (47-174)||(18372418-18372544)
chr7 (46-186)||(3227109-3227248)
chr7 (112-186)||(17782579-17782653)
chr7 (60-186)||(30439332-30439457)
chr7 (60-186)||(31659623-31659750)
chr7 (110-186)||(11658380-11658456)
chr7 (60-184)||(42886260-42886384)
chr7 (115-186)||(20163585-20163656)
chr7 (113-180)||(47524532-47524599)
chr7 (60-186)||(34352760-34352886)
chr7 (71-182)||(14999140-14999249)
chr7 (35-186)||(47369782-47369933)
chr7 (69-186)||(31660992-31661109)
chr7 (36-185)||(46482599-46482748)
chr7 (60-184)||(128575-128699)
chr7 (106-186)||(48934923-48935003)
chr7 (56-129)||(597256-597327)
chr7 (110-184)||(11662575-11662649)
chr7 (58-103)||(14998064-14998109)
chr7 (129-186)||(15681596-15681653)
chr7 (113-186)||(34174010-34174082)
chr7 (130-186)||(8527041-8527097)
chr7 (110-186)||(42303373-42303449)
chr7 (60-155)||(48933699-48933792)
chr7 (130-177)||(18754513-18754560)
chr7 (134-163)||(3148177-3148206)
chr7 (121-186)||(20636856-20636921)
chr7 (131-179)||(1450400-1450448)
chr7 (130-186)||(17305765-17305821)
chr7 (130-186)||(19919848-19919904)
chr7 (130-186)||(27869197-27869253)
[»] chr5 (48 HSPs)
chr5 (46-184)||(42195137-42195273)
chr5 (37-186)||(25523070-25523219)
chr5 (35-186)||(19752913-19753063)
chr5 (55-184)||(24332916-24333045)
chr5 (46-186)||(5778796-5778936)
chr5 (46-186)||(42196160-42196300)
chr5 (35-186)||(18486851-18487002)
chr5 (60-186)||(25055413-25055539)
chr5 (36-186)||(22940573-22940722)
chr5 (55-184)||(2186774-2186902)
chr5 (38-186)||(19754082-19754231)
chr5 (70-186)||(21835042-21835157)
chr5 (40-184)||(2686355-2686501)
chr5 (49-137)||(16650042-16650130)
chr5 (70-182)||(36486472-36486584)
chr5 (53-179)||(1015492-1015618)
chr5 (35-144)||(25524047-25524156)
chr5 (46-186)||(16650815-16650955)
chr5 (70-186)||(28538677-28538793)
chr5 (60-184)||(28539794-28539917)
chr5 (64-186)||(5777902-5778022)
chr5 (76-186)||(25056370-25056481)
chr5 (106-186)||(1796055-1796135)
chr5 (35-186)||(18485139-18485297)
chr5 (110-186)||(20214197-20214272)
chr5 (56-186)||(5962542-5962670)
chr5 (92-186)||(33160292-33160386)
chr5 (110-184)||(20216787-20216861)
chr5 (110-186)||(25524151-25524228)
chr5 (109-186)||(33158099-33158176)
chr5 (113-164)||(34893688-34893739)
chr5 (130-184)||(40428642-40428696)
chr5 (111-184)||(38834090-38834162)
chr5 (118-186)||(2188962-2189029)
chr5 (110-186)||(2373372-2373448)
chr5 (112-186)||(5730442-5730517)
chr5 (60-99)||(5730514-5730553)
chr5 (131-186)||(41663770-41663825)
chr5 (78-168)||(1797289-1797379)
chr5 (111-184)||(2685749-2685820)
chr5 (132-186)||(26639286-26639340)
chr5 (59-100)||(2685872-2685913)
chr5 (49-186)||(18154495-18154630)
chr5 (131-179)||(16039758-16039806)
chr5 (130-186)||(18695249-18695305)
chr5 (130-186)||(24025022-24025078)
chr5 (130-186)||(31576606-31576662)
chr5 (110-186)||(40255696-40255772)
[»] chr8 (64 HSPs)
chr8 (38-182)||(1824030-1824174)
chr8 (38-182)||(1858475-1858619)
chr8 (35-186)||(10006345-10006496)
chr8 (35-186)||(10007712-10007863)
chr8 (60-186)||(22220389-22220515)
chr8 (62-186)||(30568888-30569011)
chr8 (49-184)||(8389652-8389787)
chr8 (60-186)||(5513983-5514108)
chr8 (46-186)||(8388465-8388603)
chr8 (46-182)||(43661783-43661919)
chr8 (49-164)||(2378883-2378998)
chr8 (60-186)||(22221338-22221464)
chr8 (60-186)||(22227680-22227806)
chr8 (60-186)||(24122884-24123009)
chr8 (60-186)||(32968457-32968583)
chr8 (49-186)||(30336464-30336601)
chr8 (36-185)||(43661267-43661416)
chr8 (55-155)||(18488231-18488331)
chr8 (46-186)||(24359810-24359948)
chr8 (46-186)||(30335640-30335780)
chr8 (70-185)||(29043400-29043515)
chr8 (69-186)||(32207308-32207423)
chr8 (55-184)||(30570225-30570353)
chr8 (60-184)||(29968311-29968434)
chr8 (60-186)||(17844279-17844401)
chr8 (46-184)||(11282011-11282149)
chr8 (84-186)||(12351922-12352024)
chr8 (60-178)||(18970920-18971037)
chr8 (60-178)||(18978029-18978146)
chr8 (60-186)||(18979094-18979220)
chr8 (60-186)||(32973910-32974036)
chr8 (35-186)||(1823553-1823705)
chr8 (35-186)||(1857998-1858150)
chr8 (110-186)||(38974796-38974872)
chr8 (110-186)||(38980068-38980144)
chr8 (110-186)||(39005894-39005970)
chr8 (110-186)||(39011165-39011241)
chr8 (79-182)||(45114510-45114612)
chr8 (46-186)||(2379884-2380020)
chr8 (60-184)||(40471121-40471244)
chr8 (92-186)||(12353367-12353459)
chr8 (92-184)||(24361199-24361290)
chr8 (84-186)||(11283207-11283309)
chr8 (109-186)||(42982680-42982757)
chr8 (60-163)||(24123872-24123975)
chr8 (110-184)||(11287779-11287853)
chr8 (129-186)||(11456639-11456696)
chr8 (130-179)||(15869345-15869394)
chr8 (129-186)||(36249553-36249610)
chr8 (54-163)||(40469364-40469473)
chr8 (130-186)||(19392813-19392869)
chr8 (151-186)||(1824186-1824221)
chr8 (151-186)||(1858631-1858666)
chr8 (75-186)||(5514260-5514369)
chr8 (37-100)||(11456696-11456759)
chr8 (130-177)||(12723508-12723555)
chr8 (131-186)||(24483144-24483199)
chr8 (130-176)||(8802646-8802692)
chr8 (60-186)||(34625174-34625302)
chr8 (130-186)||(21930048-21930104)
chr8 (115-163)||(30539233-30539281)
chr8 (138-186)||(30784519-30784567)
chr8 (130-174)||(38630068-38630112)
chr8 (130-186)||(44146973-44147029)
[»] chr2 (52 HSPs)
chr2 (36-186)||(22848192-22848342)
chr2 (35-186)||(18905937-18906087)
chr2 (55-164)||(22587524-22587632)
chr2 (61-186)||(22587929-22588053)
chr2 (57-186)||(18904368-18904497)
chr2 (71-186)||(802576-802690)
chr2 (60-186)||(36449779-36449905)
chr2 (46-155)||(11996739-11996848)
chr2 (46-186)||(11258771-11258911)
chr2 (60-186)||(18797247-18797374)
chr2 (36-186)||(26545471-26545621)
chr2 (60-186)||(18300699-18300822)
chr2 (35-186)||(13030293-13030441)
chr2 (60-159)||(810755-810854)
chr2 (111-186)||(7899907-7899982)
chr2 (60-186)||(38840467-38840593)
chr2 (49-186)||(18299374-18299511)
chr2 (112-184)||(36450947-36451018)
chr2 (60-186)||(1034444-1034569)
chr2 (106-184)||(13567975-13568053)
chr2 (35-167)||(18869111-18869245)
chr2 (69-186)||(23869518-23869634)
chr2 (106-186)||(18868925-18869005)
chr2 (121-186)||(11938823-11938888)
chr2 (36-184)||(26544152-26544299)
chr2 (35-164)||(28617945-28618073)
chr2 (106-178)||(5819733-5819804)
chr2 (60-186)||(11257623-11257748)
chr2 (110-164)||(32739646-32739700)
chr2 (55-184)||(7898694-7898823)
chr2 (130-186)||(15735065-15735121)
chr2 (92-186)||(41878093-41878189)
chr2 (111-186)||(41879237-41879312)
chr2 (60-186)||(13570531-13570657)
chr2 (109-186)||(24476867-24476942)
chr2 (92-186)||(38839243-38839337)
chr2 (66-186)||(1033212-1033330)
chr2 (84-144)||(1091738-1091798)
chr2 (130-186)||(2986933-2986989)
chr2 (130-174)||(6763964-6764008)
chr2 (130-186)||(11175908-11175964)
chr2 (130-186)||(18538075-18538131)
chr2 (35-99)||(21837127-21837191)
chr2 (129-184)||(13830270-13830324)
chr2 (84-174)||(1093144-1093234)
chr2 (134-168)||(44617998-44618032)
chr2 (70-155)||(1410032-1410117)
chr2 (130-186)||(15700993-15701049)
chr2 (131-186)||(21837300-21837353)
chr2 (130-186)||(30714276-30714332)
chr2 (60-128)||(32739710-32739778)
chr2 (115-163)||(43029036-43029084)
[»] chr6 (40 HSPs)
chr6 (35-186)||(7314881-7315031)
chr6 (49-186)||(6842246-6842383)
chr6 (46-186)||(8659266-8659406)
chr6 (70-186)||(3333010-3333126)
chr6 (46-186)||(3721613-3721753)
chr6 (70-186)||(16704481-16704597)
chr6 (46-186)||(27437829-27437969)
chr6 (64-186)||(8821874-8821996)
chr6 (57-182)||(6840199-6840322)
chr6 (36-186)||(7316244-7316394)
chr6 (54-184)||(5658759-5658889)
chr6 (46-184)||(34834539-34834677)
chr6 (60-184)||(1829577-1829701)
chr6 (46-186)||(8660164-8660303)
chr6 (66-186)||(8822773-8822893)
chr6 (78-186)||(26574620-26574727)
chr6 (60-174)||(10785887-10786000)
chr6 (110-186)||(30495722-30495796)
chr6 (70-186)||(12382695-12382811)
chr6 (46-186)||(17496794-17496939)
chr6 (60-186)||(3333499-3333627)
chr6 (70-186)||(10784593-10784710)
chr6 (60-184)||(26575028-26575150)
chr6 (55-163)||(26949154-26949259)
chr6 (69-186)||(27322051-27322167)
chr6 (110-182)||(29473082-29473154)
chr6 (112-186)||(3722533-3722607)
chr6 (130-184)||(4597408-4597462)
chr6 (140-186)||(20973353-20973399)
chr6 (60-162)||(34830927-34831029)
chr6 (46-99)||(3722483-3722536)
chr6 (70-186)||(14822361-14822477)
chr6 (130-186)||(24051010-24051066)
chr6 (130-186)||(26710554-26710610)
chr6 (118-176)||(30494569-30494625)
chr6 (130-186)||(4013912-4013968)
chr6 (111-186)||(16703571-16703643)
chr6 (130-186)||(18749375-18749431)
chr6 (130-186)||(23124933-23124989)
chr6 (130-186)||(35102492-35102548)
[»] scaffold0586 (2 HSPs)
scaffold0586 (66-184)||(6346-6464)
scaffold0586 (60-186)||(9001-9125)
[»] scaffold2034 (2 HSPs)
scaffold2034 (60-186)||(234-360)
scaffold2034 (60-163)||(952-1055)
[»] scaffold1303 (1 HSPs)
scaffold1303 (49-186)||(1440-1577)
[»] scaffold0019 (2 HSPs)
scaffold0019 (49-186)||(60091-60228)
scaffold0019 (49-186)||(61422-61559)
[»] scaffold0003 (1 HSPs)
scaffold0003 (46-186)||(49393-49533)
[»] scaffold0049 (2 HSPs)
scaffold0049 (70-186)||(7399-7515)
scaffold0049 (111-186)||(7539-7613)
[»] scaffold0320 (1 HSPs)
scaffold0320 (35-186)||(19489-19640)
[»] scaffold0632 (1 HSPs)
scaffold0632 (60-186)||(3282-3407)
[»] scaffold0227 (1 HSPs)
scaffold0227 (110-186)||(143-219)
[»] scaffold0294 (1 HSPs)
scaffold0294 (92-186)||(5444-5538)
[»] scaffold0302 (2 HSPs)
scaffold0302 (110-186)||(17471-17547)
scaffold0302 (110-186)||(18800-18876)
[»] scaffold0369 (1 HSPs)
scaffold0369 (73-186)||(13194-13305)
[»] scaffold0059 (1 HSPs)
scaffold0059 (60-186)||(4704-4829)
[»] scaffold0321 (1 HSPs)
scaffold0321 (109-185)||(18730-18806)
[»] scaffold0045 (1 HSPs)
scaffold0045 (71-136)||(48358-48423)
[»] scaffold0419 (1 HSPs)
scaffold0419 (130-186)||(2962-3018)
[»] scaffold0186 (1 HSPs)
scaffold0186 (92-186)||(23082-23174)
[»] scaffold0093 (2 HSPs)
scaffold0093 (110-186)||(2489-2564)
scaffold0093 (110-186)||(7112-7187)
[»] scaffold0002 (1 HSPs)
scaffold0002 (129-186)||(454930-454987)
[»] scaffold0112 (1 HSPs)
scaffold0112 (110-186)||(37149-37224)
[»] scaffold0062 (2 HSPs)
scaffold0062 (130-186)||(49905-49961)
scaffold0062 (130-186)||(62444-62500)
[»] scaffold0025 (1 HSPs)
scaffold0025 (130-186)||(61815-61871)


Alignment Details
Target: chr3 (Bit Score: 141; Significance: 1e-73; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 264 - 460
Target Start/End: Complemental strand, 35341829 - 35341636
Alignment:
Q  264 attctgctgcttagagaaagtgataatcataggggttacgttgtcttttgctctcctgtgcagcggacaaaaacttgtcatccaattaagcgggttacaa 363  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  35341829 attctgctgcttacagaaagtgaaaatcataggggttacgttgtcttttgctctcctgtccagcggacaaaaacttgtcctccaattaagcgggttacaa 35341730  T
Q  364 atttcgggagacttgtccagtgctccactactgnnnnnnnncttctgttccattgttatcttttggatcaaacaccgcataacttttattgttctgt 460  Q
    |||||||||||||||||||||||||| ||||||         ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  35341729 atttcgggagacttgtccagtgctccgctactgtttttg---ttctgttccattgttatcttttggatcaaacaccgcacaacttttattgttctgt 35341636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 55 - 186
Target Start/End: Complemental strand, 19984981 - 19984850
Alignment:
Q  55 tggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttt 154  Q
    |||| |||||||  |||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||||| ||||||| |||| ||||    
T  19984981 tggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagggtcaaaattgtagtttttgtacatagggggccaaaattgcaagtttt 19984882  T
Q  155 tgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||| |||| |||||||||||||||||||||    
T  19984881 tgaaacttagggggggaaaagtgcactttagc 19984850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 35 - 186
Target Start/End: Complemental strand, 12700325 - 12700176
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagg 134  Q
    |||||||||| |||||||||  || |||||||  |||||||||||||||||||| | ||||||||| ||  || ||||||||||||||||||||| ||||    
T  12700325 ctgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaatgtggctaaatcatagggggtcaaaattgtagtttttgtacttagg 12700226  T
Q  135 ggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    || ||||||| |||| ||||||||||||  |||||| |||||||||||||||    
T  12700225 gggccaaaattgcaagtttttgaaagtt--aggggggaaagtgcactttagc 12700176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 46720082 - 46719942
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| ||| | |||||||  ||||||||||||| |||||||  |||||||||||| ||||  ||||||||||||||| |||||||||| ||||||||    
T  46720082 gcgttgacttgatcaaaattgaccaaaaggaccaaatatgcaaatgggctaaatcttagaggactaaaattgtagtttttatacatagggggccaaaatc 46719983  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||||| |||||||  ||||||||| |||||||||||    
T  46719982 gcaactttttaaaagttaaggggggaaaaatgcactttagc 46719942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 46721180 - 46721320
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| ||||| |||||||  || |||||||||| |||||||| ||||||||||||  |||  ||||||||||||||||||||||||||   ||||||    
T  46721180 gcgttgacttggtcaaaattgaccagaaggaccaaatatgcaaaggggctaaatcttaggggactaaaattgtagtttttgtacatagggggttaaaatc 46721279  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||||| |||||||| ||| |||||||||||||||||    
T  46721280 gcaactttttaaaagttagggggagaaaagtgcactttagc 46721320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 35 - 186
Target Start/End: Complemental strand, 47614337 - 47614186
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagg 134  Q
    |||||||||| |||||||||  || ||||||   |||||| ||||||||||||||||||||||||||||  ||  ||||||||| |||||  ||| ||||    
T  47614337 ctgccacgtaggcgttgaataagtcaaaattaaccaaaagcaccaaagatgcaaagaggctaaatcttagggggccaaaattgttgttttgatacttagg 47614238  T
Q  135 ggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    || ||||||| |||| ||||||||||||||||||| ||||||||||||||||    
T  47614237 gggccaaaattgcaagtttttgaaagttagaggggaaaaagtgcactttagc 47614186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 534626 - 534500
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||||||| |||| |||||||||||||||| |||||||||||||  ||  ||||||||||||||||||||||||| |  |||||| |||| ||||||| |    
T  534626 aaaattggccaaatggaccaaagatgcaaataggctaaatcttagggggccaaaattgtagtttttgtacataggaggtcaaaattgcaagtttttgaga 534527  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    |||||||||| ||||||||||||||||    
T  534526 gttagaggggaaaaagtgcactttagc 534500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 46 - 184
Target Start/End: Original strand, 47610540 - 47610678
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| | ||| ||||||||||||||||||||||| ||||| | ||||||||||||  ||  | ||||||| ||||| |||| |||||| |||||||     
T  47610540 gcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaatt 47610639  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  47610640 gcaagtttttgaaagttagagggggaaaagtgcacttta 47610678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 60 - 184
Target Start/End: Original strand, 54986981 - 54987103
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||||||| ||||| || |||||||||||||  ||||||||||| ||| |||||||| |||||||| |||||||||||| ||||||||||||||||||||    
T  54986981 aaaattggccaaaatgatcaaagatgcaaaggagctaaatcttagagggtcaaaattatagtttttatacataggggactaaaatcgcaactttttgaaa 54987080  T
Q  160 gttagagggggaaaagtgcacttta 184  Q
     ||  ||||||||||||||||||||    
T  54987081 ctt--agggggaaaagtgcacttta 54987103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 22776786 - 22776912
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||||  ||| |||||||| |||||||| |||||| |||||  ||  ||||||||||||||||||||||||||| ||||||| |||||||| |||||    
T  22776786 aaaattgggaaaatggaccaaatatgcaaaggggctaattcttagggggccaaaattgtagtttttgtacatagggggccaaaattgcaactttctgaaa 22776885  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    ||||| || ||||||||||||||||||    
T  22776886 gttaggggtggaaaagtgcactttagc 22776912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 35 - 186
Target Start/End: Original strand, 12703449 - 12703599
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagg 134  Q
    |||||||||| |||||||||  || ||||||  |||||| |||||||||||||| | ||||||||| ||  ||  |||||||||||||||||||| ||||    
T  12703449 ctgccacgtaggcgttgaataagtcaaaattattcaaaatgaccaaagatgcaatggggctaaatcatagggggccaaaattgtagtttttgtacttagg 12703548  T
Q  135 ggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    || |||||||  ||| ||||||||||||||| ||| ||||||||||||||||    
T  12703549 gggccaaaattacaaatttttgaaagttaga-gggaaaaagtgcactttagc 12703599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 29932660 - 29932798
Alignment:
Q  47 cgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcg 146  Q
    |||||| | ||| |||||||| ||||||||| |    ||||||| | ||||||||||  || ||||||||||||||||||||| |||||| ||||||| |    
T  29932660 cgttgactaggtcaaaattggccaaaaggactattattgcaaagggactaaatcttaaggggtcaaaattgtagtttttgtacttagggg-ccaaaattg 29932758  T
Q  147 caactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||| ||||||||||||||||||||||||||||||||||||    
T  29932759 caagtttttgaaagttagagggggaaaagtgcactttagc 29932798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 29981814 - 29981952
Alignment:
Q  47 cgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcg 146  Q
    |||||| | ||| |||||||| ||||||||| |    ||||||| | ||||||||||  || ||||||||||||||||||||| |||||| ||||||| |    
T  29981814 cgttgactaggtcaaaattggccaaaaggactattattgcaaagggactaaatcttaaggggtcaaaattgtagtttttgtacttagggg-ccaaaattg 29981912  T
Q  147 caactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||| ||||||||||||||||||||||||||||||||||||    
T  29981913 caagtttttgaaagttagagggggaaaagtgcactttagc 29981952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 47609838 - 47609698
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||| | ||||||||||||  ||    ||||||| ||||| |||| ||||||  ||||||     
T  47609838 gcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaatt 47609739  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||| |||||||||||||| |||||||||||||| ||||||    
T  47609738 gcaagtttttgaaagttagggggggaaaagtgcattttagc 47609698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 36 - 186
Target Start/End: Complemental strand, 7758553 - 7758403
Alignment:
Q  36 tgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggg 135  Q
    |||||| || ||||||| | ||| |||||||  |||||||||||||||| ||||| || |||||||||  ||   ||||||||||||||||||| |||||    
T  7758553 tgccacttaagcgttgactaggtcaaaattgaccaaaaggaccaaagatacaaaggggttaaatcttagggggcaaaaattgtagtttttgtacttaggg 7758454  T
Q  136 gaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |  |||||| |||| |||||||||||||  |||| ||||||||||||||||    
T  7758453 ggtcaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagc 7758403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 60 - 184
Target Start/End: Complemental strand, 7267770 - 7267647
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||||||  ||||||||  |||| ||||| ||||||||||||||  ||  |||||||||||||| ||||| |||||| ||||||| |||| |||||||||    
T  7267770 aaaattgaccaaaaggattaaagttgcaatgaggctaaatcttagggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaa 7267671  T
Q  160 gttagagggggaaaagtgcacttta 184  Q
    |||| ||||||||||||||||||||    
T  7267670 gtta-agggggaaaagtgcacttta 7267647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 70 - 186
Target Start/End: Original strand, 54540774 - 54540890
Alignment:
Q  70 aaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggg 169  Q
    ||||||| ||||| ||||||| ||||||||||||  ||  |||||||||||||||||||| || |||  |||||| |||| |||||||||||||  ||||    
T  54540774 aaaaggatcaaagttgcaaaggggctaaatcttagggggccaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttaaggggg 54540873  T
Q  170 gaaaagtgcactttagc 186  Q
    |||||||||||||||||    
T  54540874 gaaaagtgcactttagc 54540890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 36 - 186
Target Start/End: Complemental strand, 8456628 - 8456479
Alignment:
Q  36 tgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggg 135  Q
    ||||||| | ||||||| | ||| |||||||   ||||||| ||||  ||||| ||||||||||||||  ||  |||||||||||||||||||  |||||    
T  8456628 tgccacgcaggcgttgactaggtcaaaattgactaaaaggatcaaatttgcaatgaggctaaatcttagggggccaaaattgtagtttttgtatttaggg 8456529  T
Q  136 gaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||| |||| ||||||||| |||| |||| ||||||||||||||||    
T  8456528 gaccaaaattgcaagtttttgaaaattag-ggggaaaaagtgcactttagc 8456479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 75 - 186
Target Start/End: Original strand, 19986059 - 19986172
Alignment:
Q  75 gaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatag--gggaccaaaatcgcaactttttgaaagttagagggggaa 172  Q
    |||||||||||||||| || ||||||||| ||| ||||||||||||||||| |||||||  ||| ||||||| |||| ||||||||| |||   ||||||    
T  19986059 gaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtagtttttatacataggaggggccaaaattgcaagtttttgaaacttaagaggggaa 19986158  T
Q  173 aagtgcactttagc 186  Q
    ||||||||||||||    
T  19986159 aagtgcactttagc 19986172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 49216374 - 49216248
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||||||| ||||| || ||||||||||||   |||||||||||  ||  || ||||||||||||||||||||||||  |||||| ||||||||||||||    
T  49216374 aaaattggccaaaatgatcaaagatgcaaatgagctaaatcttaaggggacataattgtagtttttgtacatagggggtcaaaattgcaactttttgaaa 49216275  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
     ||||  | ||||||||||||||||||    
T  49216274 cttaggcgtggaaaagtgcactttagc 49216248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 36 - 184
Target Start/End: Original strand, 23770357 - 23770505
Alignment:
Q  36 tgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggg 135  Q
    |||||| || ||||||| ||||| ||| |||  ||||||||| |||||||||||| || |||||||||  ||   |||||||||||||||||||||| ||    
T  23770357 tgccacatatgcgttgacttggtcaaagttgaccaaaaggactaaagatgcaaaggggttaaatcttagggggctaaaattgtagtttttgtacataagg 23770456  T
Q  136 gaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    ||||||||| | |||||||| ||| |||  ||| ||||| |||||||||    
T  23770457 gaccaaaattgtaacttttttaaaattaaggggagaaaattgcacttta 23770505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 51470113 - 51469973
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| | ||| ||||||| ||||||||||||||| ||||| | ||||||||||||  ||    ||||||| ||||| |||| |||||| |||||||     
T  51470113 gcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggccaaaatt 51470014  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||| ||||||||| |||| | |||||||||||||||||||    
T  51470013 gcaagtttttgaaaattagggagggaaaagtgcactttagc 51469973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 35 - 186
Target Start/End: Complemental strand, 8876058 - 8875907
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagg 134  Q
    |||||||||| |||||||||  || |||||||   |||||||||||| |||||||  ||||||||||||  ||  ||||||||||||||||||||||| |    
T  8876058 ctgccacgtaggcgttgaataagtcaaaattgactaaaaggaccaaatatgcaaattggctaaatcttagggggccaaaattgtagtttttgtacataag 8875959  T
Q  135 ggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    || | ||||| ||| ||||||  || |||  ||| |||||||||||||||||    
T  8875958 gggctaaaattgcagctttttcgaacttaaggggtgaaaagtgcactttagc 8875907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 182
Target Start/End: Complemental strand, 23769996 - 23769862
Alignment:
Q  47 cgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcg 146  Q
    |||||| ||||| |||||||  |||||||||||||||||||||   || ||||||||  || |||||||||||||||||| |||||| |||  ||||| |    
T  23769996 cgttgacttggtcaaaattgaccaaaaggaccaaagatgcaaatgagcgaaatcttagggg-tcaaaattgtagtttttgcacatagaggattaaaattg 23769898  T
Q  147 caactttttgaaagttagagggggaaaagtgcactt 182  Q
    |||||| ||||||||||  || ||||||||||||||    
T  23769897 caacttgttgaaagttaagggtggaaaagtgcactt 23769862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 60 - 182
Target Start/End: Original strand, 6250551 - 6250672
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||||||||||||| ||||||||||||  || ||||||||| |||   |||||| ||| |||||||||||||||||||||||| ||| ||||| |||    
T  6250551 aaaattggtcaaaaggatcaaagatgcaaat-ggttaaatcttagagggctaaaattttaggttttgtacataggggaccaaaatcacaattttttaaaa 6250649  T
Q  160 gttagagggggaaaagtgcactt 182  Q
     ||| | |||| |||||||||||    
T  6250650 cttaaaagggggaaagtgcactt 6250672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 54539882 - 54539756
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||||  ||||||| ||||| ||||||   |||||||||||  |||||||||||||||||||||||  ||||||   ||||| |||| |||||||||    
T  54539882 aaaattggcaaaaaggatcaaagttgcaaatgagctaaatcttaggggatcaaaattgtagtttttgtatttagggggttaaaattgcaagtttttgaaa 54539783  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    ||||  || ||||||||||||||||||    
T  54539782 gttaagggtggaaaagtgcactttagc 54539756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 60 - 169
Target Start/End: Original strand, 6171217 - 6171324
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||||||| |||||||||||||||||||||  |  ||||||||| ||| |||||||| ||||||||||||||||||| |||||||| ||| ||||| |||    
T  6171217 aaaattggccaaaaggaccaaagatgcaaat-gtttaaatcttagagggtcaaaattatagtttttgtacatagggg-ccaaaatcacaattttttaaaa 6171314  T
Q  160 gttagagggg 169  Q
     |||||||||    
T  6171315 cttagagggg 6171324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 60 - 160
Target Start/End: Complemental strand, 31645100 - 31645000
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||||||||||||||||||||||||||  ||||||||||||   | | |||||||||||||||| || |||||| ||||||| | || |||||||||    
T  31645100 aaaattggtcaaaaggaccaaagatgcaaatgggctaaatcttaggaggttaaaattgtagtttttgcacttagggggccaaaattgtaagtttttgaaa 31645001  T
Q  160 g 160  Q
    |    
T  31645000 g 31645000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 51470415 - 51470554
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| | ||| ||||||| ||||||||||||||| ||||| |  |||||||||||  ||  | ||||||| ||||| |||| ||||||| | ||||     
T  51470415 gcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggagctaaatcttaggggtgctaaattgtggttttggtacttaggggatctaaatt 51470514  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||| |||||||||||||| ||||||| |||||||||||||    
T  51470515 gcaagtttttgaaagttag-gggggaagagtgcactttagc 51470554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 58 - 184
Target Start/End: Complemental strand, 52104606 - 52104484
Alignment:
Q  58 ttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttga 157  Q
    |||||||||||||||| |||||||||||||||   | |||||||||   |  ||||||| |||||||||||||||||  ||||||||  |||||||||||    
T  52104606 ttaaaattggtcaaaatgaccaaagatgcaaatgagttaaatcttaggtggccaaaattatagtttttgtacatagg--accaaaattacaactttttga 52104509  T
Q  158 aagttagagggggaaaagtgcacttta 184  Q
    |||||  ||||||||||||||| ||||    
T  52104508 aagtt--agggggaaaagtgcatttta 52104484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 84 - 186
Target Start/End: Complemental strand, 29931329 - 29931227
Alignment:
Q  84 tgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttt 183  Q
    ||||||| || |||||||||  ||  |||||||||||||||||||  |||||| | ||||| |||| |||||||||||||| || |||||||||||||||    
T  29931329 tgcaaaggggttaaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcacttt 29931230  T
Q  184 agc 186  Q
    |||    
T  29931229 agc 29931227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 84 - 186
Target Start/End: Complemental strand, 29980483 - 29980381
Alignment:
Q  84 tgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttt 183  Q
    ||||||| || |||||||||  ||  |||||||||||||||||||  |||||| | ||||| |||| |||||||||||||| || |||||||||||||||    
T  29980483 tgcaaaggggttaaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcacttt 29980384  T
Q  184 agc 186  Q
    |||    
T  29980383 agc 29980381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 35 - 184
Target Start/End: Complemental strand, 51347420 - 51347271
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagg 134  Q
    |||||||||| ||||||| | ||| || |||| |||||| || ||||| ||||||  || |||||||||  || ||||||||||  ||||||| |||||     
T  51347420 ctgccacgtatgcgttgactaggtcaacattgatcaaaatgatcaaagttgcaaacgggttaaatcttagggggtcaaaattgtcatttttgttcataga 51347321  T
Q  135 ggaccaaaatcgcaactttttgaaagtta-gagggggaaaagtgcacttta 184  Q
    |||||||||| |||||||||| ||| ||| |||||||||| ||||||||||    
T  51347320 ggaccaaaattgcaactttttcaaacttaagagggggaaa-gtgcacttta 51347271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 35 - 163
Target Start/End: Complemental strand, 6249760 - 6249633
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagg 134  Q
    ||||||||||  |||||| | ||| ||||||| ||||||||| ||||  ||||| ||| ||||||||||  |||| ||||||||||||||||||| || |    
T  6249760 ctgccacgtagacgttgactaggtcaaaattgatcaaaaggatcaaatttgcaatgagactaaatcttaagggat-aaaattgtagtttttgtacttaag 6249662  T
Q  135 ggaccaaaatcgcaactttttgaaagtta 163  Q
    |||  ||||| |||| |||||||||||||    
T  6249661 ggattaaaattgcaagtttttgaaagtta 6249633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 28262269 - 28262194
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||| |||||  ||||| |||| ||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  28262269 caaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttag-gggggaaaagtgcactttagc 28262194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 28263135 - 28263211
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||| |||||  ||||| |||| ||||||||||||| |||| |||||||| |||||||||||||||||||||    
T  28263135 caaaattgtggttttcatacatggggggccaaaatcgcaacgttttaaaagttagggggggaaaagtgcactttagc 28263211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 163
Target Start/End: Original strand, 34019098 - 34019222
Alignment:
Q  39 cacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggac 138  Q
    |||||| |||||||||   | |||||||  |||||||||||||||||||||   ||||||| |||  ||| |||||||||||| ||||||| ||||||      
T  34019098 cacgtaggcgttgaataaatcaaaattgaccaaaaggaccaaagatgcaaatgagctaaattttaggggaccaaaattgtagtgtttgtacctagggggt 34019197  T
Q  139 caaaatcgcaactttttgaaagtta 163  Q
    |||||| |||| |||||||||||||    
T  34019198 caaaattgcaagtttttgaaagtta 34019222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 51038814 - 51038890
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||||||||||||| ||||||||  |||||| |||||||||| |||||||  || ||||||||||||||||||    
T  51038814 caaaattgtagtttttgttcatagggggtcaaaattgcaactttttaaaagttaagggtggaaaagtgcactttagc 51038890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 52276381 - 52276305
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||| |||||  ||||| |||| ||||||||||||| ||||||||| ||| |||||||||||||||||||||    
T  52276381 caaaattgttgttttcatacatggggggccaaaatcgcaacgttttgaaagatagggggggaaaagtgcactttagc 52276305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 52281571 - 52281647
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||| |||||  ||||| |||| ||||||||||||| ||||||||| ||| |||||||||||||||||||||    
T  52281571 caaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagatagggggggaaaagtgcactttagc 52281647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 51037611 - 51037537
Alignment:
Q  111 aaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||||||| ||||| ||  |||||| |||||||||||||||||| |||| |||||||||||||||||    
T  51037611 aaaattgtagtttttgttcatagagggtcaaaattgcaactttttgaaagtta-agggagaaaagtgcactttagc 51037537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 11671315 - 11671440
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||| |||||||||||||||||| |||| || |||||| ||  || |||||  |||||||||| ||  |||||| | ||||| |||| |||||||||    
T  11671315 aaaattgatcaaaaggaccaaagatgtaaaggggttaaatcatagggggtcaaatctgtagtttttatatttagggggctaaaattgcaagtttttgaaa 11671414  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    ||||| | || ||||||||||||||||    
T  11671415 gttag-gcggaaaaagtgcactttagc 11671440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 784921 - 784986
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagttttt 125  Q
    |||||||||||||| || |||||||||||||||| ||||| ||| ||||| |||||||||||||||    
T  784921 aaaattggtcaaaatgatcaaagatgcaaagaggttaaattttagaggattaaaattgtagttttt 784986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 18442708 - 18442631
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagtta-gagggggaaaagtgcactttagc 186  Q
    |||||||||||||||  ||||| |||| ||||||||||||| |||||||||||| | ||||| |||||||||||||||    
T  18442708 caaaattgtagttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggggaaagtgcactttagc 18442631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 18456087 - 18456164
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagtta-gagggggaaaagtgcactttagc 186  Q
    ||||||||| |||||  ||||| |||| ||||||||||||| |||||||||||| | |||||||||||||||||||||    
T  18456087 caaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttaggggggggaaaagtgcactttagc 18456164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 19487782 - 19487705
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagtta-gagggggaaaagtgcactttagc 186  Q
    |||||||||||||||  ||||| |||| ||||||||||||| |||||||||||| | ||||| |||||||||||||||    
T  19487782 caaaattgtagttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggggaaagtgcactttagc 19487705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 184
Target Start/End: Original strand, 40426728 - 40426877
Alignment:
Q  36 tgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggg 135  Q
    |||||| || ||||||| ||||| ||||||   |||||||||||||||  |||||  |||||||| ||  ||  |||||||||| |||||||| ||| ||    
T  40426728 tgccacatatgcgttgacttggtcaaaattaaccaaaaggaccaaagacacaaaggagctaaatcatagggggccaaaattgtaatttttgtatataagg 40426827  T
Q  136 gaccaaaatc-gcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    | || ||||  |||||||||| |||||||  |||||||||||||||||||    
T  40426828 ggccgaaatttgcaacttttttaaagttaaggggggaaaagtgcacttta 40426877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 92 - 186
Target Start/End: Original strand, 535788 - 535882
Alignment:
Q  92 ggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||  || | |||||| |||||||  ||| || ||||||||||| |||| |||||||||||||| || |||||||| |||||||||    
T  535788 ggctaaatcttagggggtgaaaattatagttttaatacttaagggaccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagc 535882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 7268851 - 7268924
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    |||||||||||||| | ||| |||| | ||||||| |||| |||||||||||||| |||||||||||||||||||    
T  7268851 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttgaaagttag-gggggaaaagtgcacttta 7268924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 93 - 183
Target Start/End: Complemental strand, 24516554 - 24516464
Alignment:
Q  93 gctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttt 183  Q
    |||||||||||  ||  |||||||||||||||| ||| |||||  ||||||| |||| ||||| |||||||| |||| |||||||||||||    
T  24516554 gctaaatcttaaggggccaaaattgtagtttttatacttagggtgccaaaattgcaagttttttaaagttaggggggaaaaagtgcacttt 24516464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 103
Target Start/End: Original strand, 47615526 - 47615594
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatctta 103  Q
    |||||||||| || ||||||  || |||||||  |||||||||||||||||||||| ||||||||||||    
T  47615526 ctgccacgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatctta 47615594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 55192019 - 55192083
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaa 174  Q
    |||||||||||||||||||| ||| || ||||||| |||| |||||||||||||  |||||||||    
T  55192019 caaaattgtagtttttgtacttagagggccaaaattgcaagtttttgaaagttaaggggggaaaa 55192083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 186
Target Start/End: Original strand, 47615593 - 47615648
Alignment:
Q  131 taggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||| ||||||| |||| |||||||||||||  |||||||||||||||||||||    
T  47615593 tagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagc 47615648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 186
Target Start/End: Complemental strand, 5001275 - 5001201
Alignment:
Q  112 aaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||| |||| |||||| ||||||| ||||  ||||||||| ||| || ||||||||||||||||||    
T  5001275 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggaggaaaagtgcactttagc 5001201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 3329060 - 3329116
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||||||||||| |||||||| |||||||| |||||||| | ||||||    
T  3329060 atagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagc 3329116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 48907538 - 48907594
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||||||||||| |||||||| |||||||| |||||||| | ||||||    
T  48907538 atagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagc 48907594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 60 - 128
Target Start/End: Original strand, 52105641 - 52105709
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgta 128  Q
    |||||||| ||||||||||||||||| ||||||||||||| |||  |  | |||||||||| |||||||    
T  52105641 aaaattggccaaaaggaccaaagatgtaaagaggctaaattttagggagttaaaattgtagcttttgta 52105709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 53614896 - 53614820
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||||||||||| || |||| |||| ||||| | || |||||||||||||  || |||||| |||||||||||    
T  53614896 caaaattgtagtttttatatatagaggactaaaattgtaagtttttgaaagttaagggaggaaaaatgcactttagc 53614820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 5029708 - 5029782
Alignment:
Q  111 aaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||| ||||| |||| |||| | ||||||| ||||  ||||||||| ||| |||||||||||||||||||||    
T  5029708 aaaattgtggttttggtacttaggaggccaaaattgcaagattttgaaagatag-gggggaaaagtgcactttagc 5029782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 22775829 - 22775783
Alignment:
Q  133 ggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcac 180  Q
    |||| ||||||| ||||||||||||||||||| |||||||||||||||    
T  22775829 gggggccaaaattgcaactttttgaaagttag-gggggaaaagtgcac 22775783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 52839113 - 52839038
Alignment:
Q  111 aaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||| ||||| |||| ||| ||  ||||||  ||| |||||| ||||||||||||||||| |||||||||||    
T  52839113 aaaattgttgttttggtacttagagggtcaaaattacaaatttttggaagttagagggggaaaattgcactttagc 52839038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 186
Target Start/End: Original strand, 52840610 - 52840704
Alignment:
Q  92 ggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||  ||  ||||||||| |||||  ||  |||||  ||||||| |||| |||||||||||||| || ||||||| ||||||||||    
T  52840610 ggctaaatcttagggggacaaaattgttgttttgataattagggagccaaaattgcaagtttttgaaagttaggggaggaaaagggcactttagc 52840704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 39843111 - 39843054
Alignment:
Q  127 tacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    |||||||||||| ||||| |||||||||| ||| |||  |||| ||||||||||||||    
T  39843111 tacataggggactaaaattgcaactttttcaaacttaagggggaaaaagtgcacttta 39843054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 186
Target Start/End: Original strand, 53901416 - 53901486
Alignment:
Q  114 attgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||||||||||| || ||   |||||| |||||||||| ||| ||||  ||||||||||||||||||||    
T  53901416 attgtagtttttgtacttaaggagtcaaaattgcaacttttttaaacttag--ggggaaaagtgcactttagc 53901486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 1743496 - 1743552
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||||||||||| |||| ||| |||| | | |||||||||| ||||||    
T  1743496 ataggggaccaaaatcgcaacattttaaaacttagggagcgaaaagtgcagtttagc 1743552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 6170348 - 6170296
Alignment:
Q  111 aaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagtta 163  Q
    ||||||||| ||||||||| || |||| |||||| |||| |||||||||||||    
T  6170348 aaaattgtaatttttgtacttaagggatcaaaattgcaagtttttgaaagtta 6170296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 8338997 - 8338941
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||  |||||||||||| ||||||||  ||| ||| |||||||||||||||||    
T  8338997 atagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagc 8338941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 13080943 - 13080895
Alignment:
Q  138 ccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||| |||||||| |||||||| |||||||| | ||||||    
T  13080943 ccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagc 13080895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 20001955 - 20002010
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||||||||||| |||||||| |||| ||| |||||||||| ||||||    
T  20001955 atagggggccaaaatcgcaacattttgaaacttag-gggagaaaagtgcagtttagc 20002010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 25179635 - 25179579
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||||||||||| |||| ||| |||||||| |||||||| | ||||||    
T  25179635 atagggggccaaaatcgcaacattttaaaacttagagggcgaaaagtgaagtttagc 25179579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 26628272 - 26628316
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaa 174  Q
    ||||||| ||||||||||||| |||||||| |||||||| |||||    
T  26628272 atagggggccaaaatcgcaacattttgaaacttagagggcgaaaa 26628316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 28173786 - 28173730
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||||||||||| || |||||  ||| ||| |||||||||||||||||    
T  28173786 atagggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagc 28173730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 49002759 - 49002807
Alignment:
Q  131 taggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgca 179  Q
    |||||| ||||||||||||||| |||||| ||||||||  |||||||||    
T  49002759 taggggtccaaaatcgcaacttcttgaaaattagagggccaaaagtgca 49002807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 135; Significance: 4e-70; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 20 - 186
Target Start/End: Original strand, 51685699 - 51685865
Alignment:
Q  20 acttagtcaagtgagctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgta 119  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||  || |||||||||||    
T  51685699 acttagtcaagtgagctgccacgtaggcgttgaattggttaaaattggccaaaaggaccaaagatgcaaaggggctaaatcttagggggtcaaaattgta 51685798  T
Q  120 gtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  51685799 gtttttgtacatagagggccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 51685865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 51684507 - 51684367
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| ||||| |||||||| |||||||||||||||||||||| ||||||||||||  ||  |||||||||||||||| |||||||||| |||||||     
T  51684507 gcgttgacttggtcaaaattggccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagtttttatacatagggggccaaaatt 51684408  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||||| |||||||  |||||||||||||||||||||    
T  51684407 gcaactttttaaaagttaaggggggaaaagtgcactttagc 51684367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 35 - 186
Target Start/End: Original strand, 36613853 - 36614004
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagg 134  Q
    |||||||||| |||||||||  || ||||||| |||||||||| |||| ||||||||||||||||||||  || ||||||||||||||||||||| ||||    
T  36613853 ctgccacgtaggcgttgaataagtcaaaattgatcaaaaggactaaagttgcaaagaggctaaatcttagggggtcaaaattgtagtttttgtacttagg 36613952  T
Q  135 ggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    || |||||||  ||| ||||| |||||||| || |||||| |||||||||||    
T  36613953 gggccaaaattacaagtttttaaaagttaggggaggaaaaatgcactttagc 36614004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 55 - 186
Target Start/End: Original strand, 45157178 - 45157308
Alignment:
Q  55 tggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttt 154  Q
    |||| |||||||  |||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||||| ||||||| |||| ||||    
T  45157178 tggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagggtcaaaattgtagtttttgtacatagggggccaaaattgcaagtttt 45157277  T
Q  155 tgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||| |||| ||||| |||||||||||||||    
T  45157278 tgaaacttag-ggggggaaagtgcactttagc 45157308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 60 - 184
Target Start/End: Complemental strand, 40384852 - 40384727
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||||||| ||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  40384852 aaaattggccaaaaggaccaaagatgcaaagaggctaaattttaggggatcaaaattgtagtttttgtacataggagactaaaattgcaactttttgaaa 40384753  T
Q  160 gttagag-ggggaaaagtgcacttta 184  Q
     ||| || ||  ||||||||||||||    
T  40384752 attaaagaggaaaaaagtgcacttta 40384727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 39153085 - 39153214
Alignment:
Q  55 tggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttt 154  Q
    |||| |||||||  |||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||| ||| ||||||| |||| ||||    
T  39153085 tggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtagtttttgtacataaggggccaaaattgcaagtttt 39153184  T
Q  155 tgaaagttagagggggaaaagtgcacttta 184  Q
    ||||| |||  |||| ||||||||||||||    
T  39153185 tgaaacttaagggggaaaaagtgcacttta 39153214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 35 - 186
Target Start/End: Original strand, 43059955 - 43060106
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagg 134  Q
    |||||||||| |||||||||  || |||||||  |||||||||||||||||||||   |||||||||||  || ||||||||||||||||||||| || |    
T  43059955 ctgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagctaaatcttaaggggtcaaaattgtagtttttgtacttaag 43060054  T
Q  135 ggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||  ||||||  ||| |||||||||||||||||||| ||||| |||||||||    
T  43060055 gggtcaaaatttcaaatttttgaaagttagagggggtaaagtacactttagc 43060106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 52827488 - 52827348
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||| | ||||||||||||  ||    ||||||| ||||| |||| ||||||  ||||||     
T  52827488 gcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaatt 52827389  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  52827388 gcaagtttttgaaagttagggggggaaaagtgcactttagc 52827348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 46 - 184
Target Start/End: Original strand, 52828030 - 52828168
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| | ||| ||||||||||||||||||||||| ||||| | ||||||||||||  ||  | ||||||| ||||| |||| |||||  |||||||     
T  52828030 gcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggagccaaaatt 52828129  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    |||| ||||||||| ||||||||||||||||||||||||    
T  52828130 gcaagtttttgaaaattagagggggaaaagtgcacttta 52828168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 39152063 - 39151934
Alignment:
Q  55 tggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttt 154  Q
    |||| |||||||  |||||||||||||||||||||| || ||||||||| ||  |||||||||||||||||||||||||||| |||||||  ||| ||||    
T  39152063 tggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagagtcaaaattgtagtttttgtacatagggggccaaaattacaagtttt 39151964  T
Q  155 tgaaagttagagggggaaaagtgcacttta 184  Q
    ||||| |||  |||| |||| |||||||||    
T  39151963 tgaaacttaagggggaaaaaatgcacttta 39151934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 75 - 186
Target Start/End: Original strand, 23980455 - 23980566
Alignment:
Q  75 gaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaa 174  Q
    ||||||| |||||||| ||||||||||||   || ||||||| |||||||||||| |||||  ||||||| |||| ||||| ||||||||||||||||||    
T  23980455 gaccaaaaatgcaaaggggctaaatcttaggagaccaaaattatagtttttgtacttagggagccaaaattgcaagttttttaaagttagagggggaaaa 23980554  T
Q  175 gtgcactttagc 186  Q
    ||||||||||||    
T  23980555 gtgcactttagc 23980566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 35 - 186
Target Start/End: Complemental strand, 36613004 - 36612854
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagg 134  Q
    |||||||||| |||||||||  ||||||||||  ||||| |||||||||||||||| | ||||||||||  || | ||||||||||||||||||| ||      
T  36613004 ctgccacgtaagcgttgaataagttaaaattgaccaaaatgaccaaagatgcaaagggactaaatcttagggggttaaaattgtagtttttgtactta-a 36612906  T
Q  135 ggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |  ||||||| |||| |||||||||||||  ||||||||| |||||||||||    
T  36612905 gatccaaaattgcaaatttttgaaagttaaggggggaaaaatgcactttagc 36612854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 36 - 186
Target Start/End: Original strand, 39222423 - 39222574
Alignment:
Q  36 tgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggg 135  Q
    ||||||||| |||||||||  || |||||||  ||||| |||||||||||||||  ||| |||||||| |||   || |||||||||||| ||| |||||    
T  39222423 tgccacgtaggcgttgaataagtcaaaattgcccaaaaagaccaaagatgcaaatgggcaaaatcttagagggctaacattgtagtttttatacttaggg 39222522  T
Q  136 gaccaaaatcgcaactttttgaaagttagaggggg-aaaagtgcactttagc 186  Q
    | ||||||| |||| ||||||||||||| |||||| ||||||||||||||||    
T  39222523 ggccaaaattgcaagtttttgaaagttaaagggggtaaaagtgcactttagc 39222574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 36 - 186
Target Start/End: Original strand, 11437149 - 11437299
Alignment:
Q  36 tgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggg 135  Q
    |||||| || ||||||| | ||| |||||||  |||||||| |||||||| |||  || |||||||||  ||  |||||||||||||||||||| || ||    
T  11437149 tgccacttaagcgttgactcggtcaaaattgaccaaaaggatcaaagatgtaaaagggttaaatcttagggggccaaaattgtagtttttgtacttaagg 11437248  T
Q  136 gaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||| |||| |||||||||||||  |||| ||||||||||||||||    
T  11437249 gaccaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagc 11437299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 46 - 184
Target Start/End: Original strand, 24426035 - 24426173
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| | ||| |||||||  |||||| | ||||  ||||| | ||||||||||||  |||  ||||||||||||||||||| |||||| |||||||     
T  24426035 gcgttgactaggtcaaaattgaccaaaagtatcaaatttgcaatggggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaatt 24426134  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    |||| |||||||||||||||||||| |||||||||||||    
T  24426135 gcaagtttttgaaagttagaggggggaaagtgcacttta 24426173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 84 - 186
Target Start/End: Original strand, 35067000 - 35067102
Alignment:
Q  84 tgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttt 183  Q
    ||||||| |||||||| |||  ||  |||||||||||||||||| |||||||| |||||||||||||||||||||| |||  ||||||||||||||||||    
T  35067000 tgcaaaggggctaaatattagggggccaaaattgtagtttttgttcatagggggccaaaatcgcaactttttgaaacttaaggggggaaaagtgcacttt 35067099  T
Q  184 agc 186  Q
    |||    
T  35067100 agc 35067102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 45148707 - 45148582
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||||||| |||||||||||||||||||||| || |||||||||  ||  |||||||||||||||| ||| |||||| ||||||| |||| |||||||||    
T  45148707 aaaattggccaaaaggaccaaagatgcaaaggggttaaatcttaggggggcaaaattgtagttttt-tacttagggggccaaaattgcaagtttttgaaa 45148609  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    ||||   ||| ||||||||||||||||    
T  45148608 gttaagcgggaaaaagtgcactttagc 45148582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 52275095 - 52274969
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||||||  |||||||| ||||  ||||| ||||||||||||||  ||  |||||||||||||||||||| ||||||  |||||| |||| |||||||||    
T  52275095 aaaattgaccaaaaggatcaaatttgcaatgaggctaaatcttaggggcccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaa 52274996  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    ||||| |||| ||||||||||||||||    
T  52274995 gttaggggggtaaaagtgcactttagc 52274969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 60 - 184
Target Start/End: Original strand, 45149944 - 45150068
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggat-caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaa 158  Q
    |||||||| |||||||| ||||||||||||| ||||||||||||  ||   ||||||||| |||||||||| || ||| ||||||| |||| ||||||||    
T  45149944 aaaattggccaaaaggatcaaagatgcaaaggggctaaatcttagggggggcaaaattgttgtttttgtacttaaggggccaaaattgcaagtttttgaa 45150043  T
Q  159 agttagagggggaaaagtgcacttta 184  Q
    |||||| |||||||||||||||||||    
T  45150044 agttag-gggggaaaagtgcacttta 45150068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 182
Target Start/End: Complemental strand, 46066663 - 46066530
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| ||||| ||||||| |||||| || || |||||||||  ||||||||||||  || | |||||||||||||||||||||| ||| | ||||||    
T  46066663 gcgttgagttggtcaaaattgatcaaaaagatcagagatgcaaattggctaaatcttaggggct-aaaattgtagtttttgtacataaggggctaaaatc 46066565  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactt 182  Q
    |||||||||||||||||  ||| ||||||||||||||    
T  46066564 gcaactttttgaaagtt--aggaggaaaagtgcactt 46066530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 49 - 186
Target Start/End: Original strand, 35595155 - 35595293
Alignment:
Q  49 ttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattg-tagtttttgtacataggggaccaaaatcgc 147  Q
    |||| ||||| |||||||  |||||||||||||||||||||| ||||||||||||  ||  |||||||| |||||||| ||||||||||  |||||| ||    
T  35595155 ttgacttggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatctta-ggggccaaaattgttagtttttatacatagggggtcaaaattgc 35595253  T
Q  148 -aactttttgaaagttagagggggaaaagtgcactttagc 186  Q
     || ||||| |||||||||||||||||||| |||||||||    
T  35595254 taagttttttaaagttagagggggaaaagtacactttagc 35595293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 36 - 186
Target Start/End: Complemental strand, 11436193 - 11436043
Alignment:
Q  36 tgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggg 135  Q
    |||||| || ||||||| | ||| |||||||  |||||| ||||||||||||||  || |||||||||  ||  |||||||||||||||| ||| ||       
T  11436193 tgccacttaggcgttgactcggtcaaaattgaccaaaagaaccaaagatgcaaatgggttaaatcttagggggccaaaattgtagtttttatacttaaaa 11436094  T
Q  136 gaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    | ||||||| |||| ||||||||||||| ||||||||||||||||||||||    
T  11436093 ggccaaaattgcaagtttttgaaagttaaagggggaaaagtgcactttagc 11436043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 35594342 - 35594218
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||||  ||||||||||||||||||||| |||||||| |||  || ||||||||||||||||  ||| |||||| | ||||| |||| |||||||||    
T  35594342 aaaattggctaaaaggaccaaagatgcaaaggggctaaattttagggg-tcaaaattgtagttttaatacttaggggtc-aaaattgcaagtttttgaaa 35594245  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    ||||| || ||||||||||||||||||    
T  35594244 gttaggggtggaaaagtgcactttagc 35594218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 35 - 184
Target Start/End: Complemental strand, 50680483 - 50680335
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagg 134  Q
    |||| ||||| |||||||||  || |||||||  |||||||| ||||||||||||| || |||||||||  |||  |||||| |||||||| ||| ||||    
T  50680483 ctgctacgtaggcgttgaataagtcaaaattgaccaaaaggatcaaagatgcaaaggggttaaatcttaggggactaaaattatagtttttatacttagg 50680384  T
Q  135 ggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    || ||||||| |||| |||||| |||||| |||||||||| |||||||||    
T  50680383 gggccaaaattgcaagtttttggaagtta-agggggaaaaatgcacttta 50680335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 70 - 185
Target Start/End: Complemental strand, 31194170 - 31194057
Alignment:
Q  70 aaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggg 169  Q
    |||||||||||||||||||| ||||||||||||| |||  ||||||| ||||||||||||||  ||| ||||| ||| |||||||| ||||||  ||||     
T  31194170 aaaaggaccaaagatgcaaaaaggctaaatcttaaagggccaaaattttagtttttgtacatgtggggccaaattcgtaactttttaaaagtt--agggt 31194073  T
Q  170 gaaaagtgcactttag 185  Q
    ||||||||| ||||||    
T  31194072 gaaaagtgccctttag 31194057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 95 - 186
Target Start/End: Complemental strand, 11190477 - 11190386
Alignment:
Q  95 taaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||| ||||||||||||| |||||||||| |||||| |||||||| |||||||||| ||| |||  ||| |||||||||||||||||    
T  11190477 taaatcttagaggatcaaaattgcagtttttgtatatagggaaccaaaattgcaactttttaaaatttaaggggtgaaaagtgcactttagc 11190386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 24422927 - 24422801
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||||||  |||||||| ||||  ||||| | ||||||||||||  ||  |||||||||||||||||||| ||||||  |||||| |||| |||||||||    
T  24422927 aaaattgaccaaaaggatcaaatttgcaatggggctaaatcttagggggccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaa 24422828  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    ||||  |||| ||||||||||||||||    
T  24422827 gttaagggggtaaaagtgcactttagc 24422801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 38 - 184
Target Start/End: Original strand, 37526830 - 37526975
Alignment:
Q  38 ccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagggga 137  Q
    ||||||| |||||||||  || ||||||| |||||| |||||||||||||||| ||||||||||||  ||  ||||||||| |||| | ||  |||||      
T  37526830 ccacgtaggcgttgaataagtcaaaattgatcaaaaagaccaaagatgcaaaggggctaaatctta-ggggccaaaattgtggtttctatatttagggag 37526928  T
Q  138 ccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    ||||||| |||| |||||||||||||  ||||||||||| |||||||    
T  37526929 ccaaaattgcaagtttttgaaagttaaggggggaaaagtacacttta 37526975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 46 - 184
Target Start/End: Original strand, 52276123 - 52276261
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| | ||| ||||||| ||||||||| ||||  ||||| | ||||||||||||  |||  ||| || |||||||||||| |||||| |||||||     
T  52276123 gcgttgactaggtcaaaattgatcaaaaggatcaaatttgcaatggggctaaatcttaggggactaaatttatagtttttgtacttagggggccaaaatt 52276222  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
     ||| ||||||||||||||| |||| |||||||||||||    
T  52276223 acaaatttttgaaagttagaagggggaaagtgcacttta 52276261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 105 - 186
Target Start/End: Complemental strand, 14999366 - 14999286
Alignment:
Q  105 aggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||||||||||||||| ||||||  |||||| |||| |||||||||||||| ||||||||||| |||||||||    
T  14999366 aggatcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttag-gggggaaaagtacactttagc 14999286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 12390005 - 12390081
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| || ||||||||||||||||| |||||||||||||||||||||||||  | ||||||| |||||||||||    
T  12390005 caaaattataatttttgtacataggggatcaaaatcgcaactttttgaaagttaaggagggaaaaatgcactttagc 12390081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 41364969 - 41364830
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| | ||| ||||||| |||||| |||||||| ||||| | ||||||||||||  ||  | ||||||| ||||| |||  |||||| |||||||     
T  41364969 gcgttgactaggtcaaaattgatcaaaatgaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtatttagggggccaaaatt 41364870  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||| |||||||||||||| ||| |||||||||||||||||    
T  41364869 gcaagtttttgaaagttag-gggagaaaagtgcactttagc 41364830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 60 - 184
Target Start/End: Complemental strand, 43058912 - 43058789
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||||||  |||||||| |||||||| |||| |||||||||||| |||   ||||||||||||||||||| ||||||  |||||| |||| ||||| |||    
T  43058912 aaaattgaccaaaaggatcaaagatgtaaaggggctaaatcttagagggctaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttcaaa 43058813  T
Q  160 gttagagggggaaaagtgcacttta 184  Q
    ||||| |||| ||||||| ||||||    
T  43058812 gttag-ggggaaaaagtgtacttta 43058789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 36 - 184
Target Start/End: Original strand, 43378663 - 43378810
Alignment:
Q  36 tgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggg 135  Q
    |||||| || ||||||| ||||| ||||| |  ||||||||  ||||||||||||  |||||||||||   | ||||||||||| ||||||||| |||||    
T  43378663 tgccacatatgcgttgacttggtcaaaatcgaccaaaaggattaaagatgcaaaggtgctaaatcttaggtggtcaaaattgtaatttttgtacttaggg 43378762  T
Q  136 gaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    || |||||| | || ||||||||||||| || | |||||||||||||||    
T  43378763 gatcaaaattgtaagtttttgaaagtta-agagagaaaagtgcacttta 43378810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 35 - 186
Target Start/End: Complemental strand, 25652866 - 25652716
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagg 134  Q
    |||||||||| |||||||||  || |||||||| ||||| |||||||||||||||  ||||||||||||  ||  |||| || || ||||||||| || |    
T  25652866 ctgccacgtaggcgttgaataagtcaaaattggccaaaatgaccaaagatgcaaatgggctaaatcttagcgggccaaatttataatttttgtacttaag 25652767  T
Q  135 ggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||| |||||| |||| ||||||||| |||||  || ||| ||||||||||||    
T  25652766 ggatcaaaattgcaagtttttgaaaattaga-aggaaaaggtgcactttagc 25652716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 186
Target Start/End: Original strand, 33088602 - 33088717
Alignment:
Q  71 aaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagaggggg 170  Q
    |||| ||||||| ||||||| ||||||||||||  |   |||||||||||||||||||| ||  ||  |||||| |||| |||||||| ||||||| |||    
T  33088602 aaagaaccaaagttgcaaaggggctaaatcttagggaggcaaaattgtagtttttgtacttaaagggtcaaaattgcaagtttttgaatgttagagaggg 33088701  T
Q  171 aaaagtgcactttagc 186  Q
    ||||||||||||||||    
T  33088702 aaaagtgcactttagc 33088717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 39699741 - 39699866
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||||||  ||||||||  |||| ||||| | ||||||||||||  ||  |||||||||||||| ||||| ||||||  |||||| |||| || ||||||    
T  39699741 aaaattgaccaaaaggattaaagttgcaatggggctaaatcttagggggccaaaattgtagtttctgtacttagggggtcaaaattgcaagttattgaaa 39699840  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    ||||| |||||||||||||||||||||    
T  39699841 gttag-gggggaaaagtgcactttagc 39699866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 45156181 - 45156052
Alignment:
Q  55 tggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttt 154  Q
    |||| |||||||  ||||| |||||||||| |||||||| ||||||||| ||| | |||||||||||||||||||||||  |  |||||| | || ||||    
T  45156181 tggtcaaaattgaccaaaaagaccaaagatacaaagaggttaaatcttagagggttaaaattgtagtttttgtacatagaaggtcaaaattgtaagtttt 45156082  T
Q  155 tgaaagttagagggggaaaagtgcacttta 184  Q
    ||||| |||  || ||||||||| ||||||    
T  45156081 tgaaacttaagggaggaaaagtgaacttta 45156052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 16290170 - 16290094
Alignment:
Q  111 aaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttaga-gggggaaaagtgcactttagc 186  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||||||| |||||| |||| |||| |||||||||||    
T  16290170 aaaattgtagtttttatacataagggaccaaaattgcaactttttgaacgttagatggggaaaaaatgcactttagc 16290094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 60 - 184
Target Start/End: Original strand, 30249464 - 30249588
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||| |||||| || ||||||| ||||   |||||||||||  || ||||||||||||||||||||||||   || ||||||  |||||||||||||    
T  30249464 aaaattgatcaaaaagatcaaagatacaaatgagctaaatcttaaggggtcaaaattgtagtttttgtacataaaagatcaaaattacaactttttgaaa 30249563  T
Q  160 gttagagggggaaaagtgcacttta 184  Q
    ||||  | ||||| |||||||||||    
T  30249564 gttacggagggaagagtgcacttta 30249588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 186
Target Start/End: Original strand, 50681557 - 50681704
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagg 134  Q
    |||||| ||| |||||||||   | ||||||| |||| ||||||||||||||||||||||||||||     ||| ||| |||||||||||| ||  |||     
T  50681557 ctgccatgtaggcgttgaataaatcaaaattgatcaataggaccaaagatgcaaagaggctaaatc----gggaccaatattgtagtttttatagttaga 50681652  T
Q  135 ggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |  ||||||| |||| ||||||||| |||   ||||||||||||||||||||    
T  50681653 gagccaaaattgcaagtttttgaaaattaagaggggaaaagtgcactttagc 50681704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 39221466 - 39221402
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaat 99  Q
    |||||||||| |||||||||| || |||||||  |||||||||||||||||||||| ||||||||    
T  39221466 ctgccacgtaggcgttgaattagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaat 39221402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 41366091 - 41366230
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| | ||| |||| |||||||||||||||||| ||||| | ||||||||||||  ||  | ||||||| |||||  ||| || ||| | |||||     
T  41366091 gcgttgactaggtcaaaagtggtcaaaaggaccaaagttgcaatggggctaaatctta-gggggctaaattgtggttttgatacttaaggggctaaaatt 41366189  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||  ||||||||||||||  ||||||||||||||||||||    
T  41366190 gcatgtttttgaaagttaggaggggaaaagtgcactttagc 41366230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 185
Target Start/End: Complemental strand, 28552362 - 28552307
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttag 185  Q
    ||||||||||||||||||||| |||||||| |||| ||| ||||||||||||||||    
T  28552362 ataggggaccaaaatcgcaacattttgaaacttagggggcgaaaagtgcactttag 28552307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 39698689 - 39698564
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||||||  ||||||||  |||| ||||| ||||||||||||||  ||  ||||||| |||||| ||||| |||||| ||||||| | || ||||| |||    
T  39698689 aaaattgaccaaaaggattaaagttgcaacgaggctaaatcttagtggc-caaaattatagtttctgtacttagggggccaaaattgaaagtttttaaaa 39698591  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    ||||  ||||| |||||||||||||||    
T  39698590 gttaaggggggtaaagtgcactttagc 39698564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 44404569 - 44404443
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||||||  ||||| |||||||||||||||  |||||||| |||  ||  ||||||| |||||||||||| |||||| | ||||| || | |||||||||    
T  44404569 aaaattgaccaaaatgaccaaagatgcaaattggctaaattttagggggccaaaattatagtttttgtacttagggggctaaaattgctagtttttgaaa 44404470  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    ||||   ||| ||||||||| ||||||    
T  44404469 gttatgagggaaaaagtgcattttagc 44404443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 186
Target Start/End: Complemental strand, 7674604 - 7674529
Alignment:
Q  109 tcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||||||||||| || ||| ||||||| |||| ||||| |||||||| |||||||||| ||||||||||    
T  7674604 tcaaaattgtagtttttgtactta-gggcccaaaattgcaagtttttaaaagttag-gggggaaaagggcactttagc 7674529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 77 - 186
Target Start/End: Original strand, 7675450 - 7675558
Alignment:
Q  77 ccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagt 176  Q
    |||||||||||||| ||||||||||||  || |||||||| || ||||| ||| |||| |  |||||| |||| ||||||||||||| ||| || |||||    
T  7675450 ccaaagatgcaaaggggctaaatcttagggggtcaaaattataatttttttacttaggagggcaaaattgcaagtttttgaaagttaaaggtgg-aaagt 7675548  T
Q  177 gcactttagc 186  Q
     |||||||||    
T  7675549 acactttagc 7675558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 149
Target Start/End: Original strand, 44411940 - 44412029
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaa 149  Q
    ||||||||  ||||||| ||||| ||||||| | |||||||||| |||   ||||||||||||||||||| |||||||| ||||| ||||    
T  44411940 aaaattggcaaaaaggatcaaagttgcaaagggcctaaatcttaaaggggtaaaattgtagtttttgtacttaggggactaaaattgcaa 44412029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 186
Target Start/End: Complemental strand, 2940382 - 2940267
Alignment:
Q  70 aaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggg 169  Q
    ||||||| ||||  |||||||||| |||||||||  |||||||||||||  ||||||| ||||| ||  ||||||| |||| |||| ||| ||| |||||    
T  2940382 aaaaggatcaaaattgcaaagaggttaaatcttaggggatcaaaattgttatttttgttcatagagggtcaaaatcacaacattttaaaactta-agggg 2940284  T
Q  170 gaaaagtgcactttagc 186  Q
    ||||| | |||||||||    
T  2940283 gaaaaatacactttagc 2940267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 164
Target Start/End: Complemental strand, 33088198 - 33088090
Alignment:
Q  56 ggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaacttttt 155  Q
    |||||||||||| ||||||||| ||||| |||||  ||||||||||||  |||  ||||||||||||||| ||  |||| ||  |||||  ||| |||||    
T  33088198 ggttaaaattggccaaaaggactaaagaagcaaatgggctaaatcttaagggaataaaattgtagtttttatatttaggagataaaaattacaagttttt 33088099  T
Q  156 gaaagttag 164  Q
    |||||||||    
T  33088098 gaaagttag 33088090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 145
Target Start/End: Complemental strand, 30248238 - 30248155
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    |||||||| ||||| || |||||||||||||  | ||||||||| ||| | ||||||||||||||||||||| ||||||| |||||    
T  30248238 aaaattggccaaaatgatcaaagatgcaaaggagttaaatcttagagggt-aaaattgtagtttttgtacat-ggggacctaaatc 30248155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 3616856 - 3616800
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||||||||||| |||||||| |||||||| |||||||| | ||||||    
T  3616856 atagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagc 3616800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 4059579 - 4059523
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||||||||||| ||||||||  ||| ||| |||||||||||||||||    
T  4059579 atagggggccaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagc 4059523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 4059769 - 4059825
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| | ||||||||||| |||||||| |||||||| |||||||| | ||||||    
T  4059769 atagggggctaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagc 4059825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 28920898 - 28920954
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||||||||||| |||||||| |||| ||| |||||||| | ||||||    
T  28920898 atagggggccaaaatcgcaacattttgaaacttagggggcgaaaagtgaagtttagc 28920954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 29182058 - 29182002
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| |||||||  ||||||||||||| ||| |||| ||||||| |||||||||    
T  29182058 atagggggccaaaattacaactttttgaaacttaaagggtgaaaagtacactttagc 29182002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 46432273 - 46432217
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||||||||||| || |||||  ||| ||| |||||||||||||||||    
T  46432273 atagggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagc 46432217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 46432463 - 46432519
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||||||||||| |||||||| |||  ||| |||||||| ||||||||    
T  46432463 atagggggccaaaatcgcaacattttgaaacttaaggggcgaaaagtggactttagc 46432519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 46573069 - 46573121
Alignment:
Q  115 ttgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagg 167  Q
    ||||||||||| | | ||||||||||||||||||||||  | |||||||||||    
T  46573069 ttgtagttttttttcttaggggaccaaaatcgcaacttcgtaaaagttagagg 46573121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 48471920 - 48471864
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||||||||||| ||||||||  ||| ||  |||||||||||||||||    
T  48471920 atagggggccaaaatcgcaacattttgaaacataggggacgaaaagtgcactttagc 48471864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 129; Significance: 1e-66; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 264 - 460
Target Start/End: Original strand, 44184855 - 44185048
Alignment:
Q  264 attctgctgcttagagaaagtgataatcataggggttacgttgtcttttgctctcctgtgcagcggacaaaaacttgtcatccaattaagcgggttacaa 363  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  44184855 attctgctgcttacagaaagtgataatcataggggttacgttgtcttttgctctcctgtccagcggacaaaaacttgtcctccaattaagcgggttacaa 44184954  T
Q  364 atttcgggagacttgtccagtgctccactactgnnnnnnnncttctgttccattgttatcttttggatcaaacaccgcataacttttattgttctgt 460  Q
    ||||| | |||||||||||||||||| ||| ||         |||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  44184955 atttcagtagacttgtccagtgctccgctattgtttttg---ttctattccattgttatcttttggatcaaacaccgcacaacttttattgttctgt 44185048  T

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Target: chr4; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 264 - 460
Target Start/End: Original strand, 10420685 - 10420878
Alignment:
Q  264 attctgctgcttagagaaagtgataatcataggggttacgttgtcttttgctctcctgtgcagcggacaaaaacttgtcatccaattaagcgggttacaa 363  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  10420685 attctgctgcttacagaaagtgataatcataggggctacgttgtcttttgctctcctgtccagcggacaaaaacttgtcctccaattaagcgggttacaa 10420784  T
Q  364 atttcgggagacttgtccagtgctccactactgnnnnnnnncttctgttccattgttatcttttggatcaaacaccgcataacttttattgttctgt 460  Q
    |||||||||||||||||| |||||||  |||||         ||||||||||||||||||||||||||||||||| ||| || ||||||||||||||    
T  10420785 atttcgggagacttgtccggtgctccggtactgtttttg---ttctgttccattgttatcttttggatcaaacactgcacaatttttattgttctgt 10420878  T

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Target: chr4; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 25685782 - 25685922
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| | ||| ||||||||||||||||||||||| ||||| | ||||||||||||  || || ||||||| ||||| |||| |||||| |||||||     
T  25685782 gcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttagggggtctaaattgtggttttggtacttagggggccaaaatt 25685881  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  25685882 gcaagtttttgaaagttagagggggaaaagtgcactttagc 25685922  T

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Target: chr4; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 55 - 186
Target Start/End: Original strand, 10448229 - 10448360
Alignment:
Q  55 tggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttt 154  Q
    |||| |||||||| |||||||||||||||||||||| ||||| |||||| |||  ||||||||||||||||||||||||||| | |||||||||||||||    
T  10448229 tggtcaaaattggccaaaaggaccaaagatgcaaaggggctatatcttagagggccaaaattgtagtttttgtacatagggggctaaaatcgcaactttt 10448328  T
Q  155 tgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||| |||| || ||  ||||||||||||||    
T  10448329 tgaaacttaggggaggggaagtgcactttagc 10448360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 35 - 184
Target Start/End: Complemental strand, 12129775 - 12129626
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagg 134  Q
    |||||||||| |||||||||  || ||||||| |||||| |||||||||||||||  ||||||||||||  || ||||||||||||||||||||| || |    
T  12129775 ctgccacgtaggcgttgaataagtcaaaattgatcaaaatgaccaaagatgcaaatgggctaaatcttaaggggtcaaaattgtagtttttgtacttacg 12129676  T
Q  135 ggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    || ||||||| |||| |||||||||||||   ||||||||||||||||||    
T  12129675 gggccaaaattgcaagtttttgaaagttaagaggggaaaagtgcacttta 12129626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 55 - 186
Target Start/End: Complemental strand, 10447139 - 10447007
Alignment:
Q  55 tggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttt 154  Q
    ||||||||||| | |||||||||||||||||||||| ||||||||||||  ||   |||||||| ||||||||||||||||| | ||||| |||||||||    
T  10447139 tggttaaaattagccaaaaggaccaaagatgcaaaggggctaaatcttaggggggtaaaattgtggtttttgtacatagggggctaaaattgcaactttt 10447040  T
Q  155 tgaaagtt-agagggggaaaagtgcactttagc 186  Q
    ||||| || ||||||||||||||||||||||||    
T  10447039 tgaaacttaagagggggaaaagtgcactttagc 10447007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 46 - 164
Target Start/End: Original strand, 37728525 - 37728643
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| ||||| |||||||   ||||||| |||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||| | |||||||     
T  37728525 gcgttgacttggtcaaaattgactaaaaggatcaaagatgcaaagaagctaaatcttaaagggtcaaaattgtagtttttgtacataggaggccaaaatt 37728624  T
Q  146 gcaactttttgaaagttag 164  Q
    |||||||||| ||||||||    
T  37728625 gcaactttttaaaagttag 37728643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 10471348 - 10471488
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| | ||| ||||||||||||||||||||||| ||||| | ||||||||||||  ||  | ||||||| ||||| |||| |||||| |||||||     
T  10471348 gcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaatt 10471447  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||| |||||||||||||  |||||||||||||||||||||    
T  10471448 gcaagtttttgaaagttaaggggggaaaagtgcactttagc 10471488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 13509319 - 13509458
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| ||||| |||||||| |||||||| ||||| ||||||| ||||||||||||  |||||||||||||||||||  ||| | |||| |||||||     
T  13509319 gcgttgacttggtcaaaattggccaaaaggagcaaaggtgcaaaggggctaaatcttaggggatcaaaattgtagttttcatacttggggggccaaaatt 13509418  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||| ||||| |||||||| ||||||||||| |||||||||    
T  13509419 gcaattttttaaaagttag-gggggaaaagtacactttagc 13509458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 50909646 - 50909773
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttatagga-tcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaa 158  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||  ||  ||||||||||||||||| |||||||||   ||||||||||||||||| ||    
T  50909646 aaaattgatcaaaaggaccaaagatgcaaaggggctaaatcttaagggggtcaaaattgtagtttttatacatagggagtcaaaatcgcaactttttaaa 50909745  T
Q  159 agttagagggggaaaagtgcactttagc 186  Q
    | |||| | || ||||||||||||||||    
T  50909746 acttagggtggaaaaagtgcactttagc 50909773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 36 - 186
Target Start/End: Original strand, 1290148 - 1290298
Alignment:
Q  36 tgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggg 135  Q
    |||||| || ||||||| | ||| |||||||  |||||||||||||||||||||| || |||||||||  ||   ||||||||||||||||||| ||| |    
T  1290148 tgccacttaggcgttgactcggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagggggctaaaattgtagtttttgtacttagag 1290247  T
Q  136 gaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    | ||||||| ||||  ||||||||||||  |||||||||||||||||||||    
T  1290248 ggccaaaattgcaagattttgaaagttaaggggggaaaagtgcactttagc 1290298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 49 - 186
Target Start/End: Complemental strand, 1834258 - 1834120
Alignment:
Q  49 ttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatc-aaaattgtagtttttgtacataggggaccaaaatcgc 147  Q
    |||| ||||| |||||||  |||||||||||||||||||||  ||||||||||||  ||  | ||||||||||||||| ||||||||||  |||||| |     
T  1834258 ttgatttggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttaggggggccaaaattgtagtttttatacatagggggtcaaaattgt 1834159  T
Q  148 aactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    || ||||| ||||||||||||||||||||||||||||||    
T  1834158 aagttttttaaagttagagggggaaaagtgcactttagc 1834120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 1835076 - 1835202
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||||  ||||||||||||||||||||| ||||||||||||  || ||||||||||||||||  ||| ||||||  |||||| |||| |||||||||    
T  1835076 aaaattggctaaaaggaccaaagatgcaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaa 1835175  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    ||||| |  ||||||||||||||||||    
T  1835176 gttagggatggaaaagtgcactttagc 1835202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 25685075 - 25684935
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| ||||| ||||||| ||||||||||||||| ||||| | ||||||||||||  ||  | ||||||| ||||| |||| ||| ||  ||||||     
T  25685075 gcgttgacttggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagagggtcaaaatt 25684976  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  25684975 gcaagtttttgaaagttagggggggaaaagtgcactttagc 25684935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 70 - 186
Target Start/End: Original strand, 31600969 - 31601085
Alignment:
Q  70 aaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggg 169  Q
    ||||||| ||||| ||||||  ||||||||||||  || ||||||||||||||||||||| ||||||  |||||| |||| ||||| |||||||||||||    
T  31600969 aaaaggatcaaagttgcaaatgggctaaatcttaaggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagagggg 31601068  T
Q  170 gaaaagtgcactttagc 186  Q
     ||||||||||||||||    
T  31601069 aaaaagtgcactttagc 31601085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 3927793 - 3927667
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||||||  |||||||||  || |||||||  ||||||| | || |||| |||||||||||||||  ||||| |||| ||||||||||||| |||| |||    
T  3927793 aaaattgcccaaaaggactgaaaatgcaaatgggctaaaacatagaggaccaaaattgtagttttcatacatggggggccaaaatcgcaacattttaaaa 3927694  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    |||||||||||||||||||||||||||    
T  3927693 gttagagggggaaaagtgcactttagc 3927667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 13386157 - 13386015
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatca-aaattgtagtttttgtacataggggaccaaaat 144  Q
    ||||||| | ||| ||||||| ||||||||||||||| ||||| ||||||||||||||  ||   | ||||||| ||||| |||| |||||| |||||||    
T  13386157 gcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatgaggctaaatcttagggggggataaattgtggttttggtacttagggggccaaaat 13386058  T
Q  145 cgcaacttttt-gaaagttagagggggaaaagtgcactttagc 186  Q
     |||| ||||| |||||||||||||||||||||||||||||||    
T  13386057 tgcaagttttttgaaagttagagggggaaaagtgcactttagc 13386015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 60 - 182
Target Start/End: Complemental strand, 31599916 - 31599794
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||||  ||||||| ||||| ||||||| ||||||||||||  ||| |||||||||||||||||||| ||||||  |||||| |||| ||||| |||    
T  31599916 aaaattggcaaaaaggatcaaagttgcaaaggggctaaatcttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaa 31599817  T
Q  160 gttagagggggaaaagtgcactt 182  Q
    ||||| |||| ||||||||||||    
T  31599816 gttaggggggaaaaagtgcactt 31599794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 70 - 186
Target Start/End: Original strand, 3928842 - 3928958
Alignment:
Q  70 aaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggg 169  Q
    ||||||||  || |||||||| ||||||| | || |||  ||||||||| |||||  |||||||||| ||||||||||||| ||||||||||||| ||||    
T  3928842 aaaaggactgaaaatgcaaaggggctaaaacatagagggccaaaattgtggttttcatacatagggggccaaaatcgcaacgttttgaaagttagggggg 3928941  T
Q  170 gaaaagtgcactttagc 186  Q
    |||||||||||||||||    
T  3928942 gaaaagtgcactttagc 3928958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 5525500 - 5525361
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||| | ||||||||||||  ||  | ||||||| ||||| |||| ||||||  ||||||     
T  5525500 gcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaatt 5525401  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||| |||||||||||||| ||||||||| || ||||||||    
T  5525400 gcaagtttttgaaagttag-gggggaaaaatgtactttagc 5525361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 5526086 - 5526225
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| | ||| ||||||||||||||||||||||  ||||| | ||||||||||||  ||  | ||||||| |||||  ||| |||||| |||||||     
T  5526086 gcgttgactaggtcaaaattggtcaaaaggaccaaaattgcaatggggctaaatcttaggggggctaaattgtggttttgttacttagggggccaaaatt 5526185  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||| ||||||||||||||| ||||||||||||||||||||    
T  5526186 gcaagtttttgaaagttaga-ggggaaaagtgcactttagc 5526225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 1963272 - 1963197
Alignment:
Q  111 aaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||||||  |||||||||||||||||||||    
T  1963272 aaaattgtagtttttgtacataggaggccaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagc 1963197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 48781007 - 48781145
Alignment:
Q  47 cgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcg 146  Q
    |||||| | ||| |||||| ||||||| |||||||| ||||| | |||||||| |||  ||  | ||||||| ||||| |||| ||||| |||||||| |    
T  48781007 cgttgactaggtcaaaatttgtcaaaatgaccaaagttgcaatggggctaaattttaggggggctaaattgtggttttagtacttaggg-accaaaattg 48781105  T
Q  147 caactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||| ||||||||||||||||||||||||||||||||||||    
T  48781106 caaatttttgaaagttagagggggaaaagtgcactttagc 48781145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 64 - 186
Target Start/End: Complemental strand, 48780371 - 48780249
Alignment:
Q  64 ttggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagtta 163  Q
    ||||||||||||||||||| ||||| | ||||||||||||  ||  | ||||||| ||||| |||| ||||||  |||||| |||| ||||| |||||||    
T  48780371 ttggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttaaaagtta 48780272  T
Q  164 gagggggaaaagtgcactttagc 186  Q
    | |||||||||||||||||||||    
T  48780271 gggggggaaaagtgcactttagc 48780249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 13386492 - 13386633
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||| | ||||| ||||||  ||  | ||||||| ||||| |||| || |||  ||||||     
T  13386492 gcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctagatcttaggggggctaaattgtggttttggtacttatggggtcaaaatt 13386591  T
Q  146 gcaactttttgaaagttagaggggg-aaaagtgcactttagc 186  Q
    |||| |||||||||||||| ||||| ||||||||||||||||    
T  13386592 gcaagtttttgaaagttagggggggaaaaagtgcactttagc 13386633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 49 - 186
Target Start/End: Original strand, 49307991 - 49308126
Alignment:
Q  49 ttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgca 148  Q
    |||| ||||| |||||||  | ||||||||||||||||  || ||| ||||| ||  ||  |||||||||||||||||||| |||||| ||||||| |||    
T  49307991 ttgacttggtcaaaattgacccaaaggaccaaagatgcgcaggggcaaaatcataggggg-caaaattgtagtttttgtacttagggggccaaaattgca 49308089  T
Q  149 actttttgaaagttagagggggaaaagtgcactttagc 186  Q
    | |||||||||||||| |||||||||||||||||||||    
T  49308090 agtttttgaaagttag-gggggaaaagtgcactttagc 49308126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 10470687 - 10470547
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| ||||| ||||||| ||||||||||||||| ||||| | ||||||||||||  ||  | |||||||  |||| |||| ||| ||  ||||||     
T  10470687 gcgttgacttggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtgattttggtacttagagggtcaaaatt 10470588  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||| |||||||||||||  |||||||||||||||||||||    
T  10470587 gcaagtttttgaaagttaaggggggaaaagtgcactttagc 10470547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 35 - 184
Target Start/End: Complemental strand, 8155889 - 8155741
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagg 134  Q
    |||| ||||| |||||||||  || ||| |||  ||||| ||| |||||||||||| ||||||||||||  ||  ||||||||||||||||| || ||||    
T  8155889 ctgctacgtaggcgttgaataagtcaaagttgaccaaaatgactaaagatgcaaagcggctaaatcttagggggccaaaattgtagtttttgaacttagg 8155790  T
Q  135 gga-ccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    ||| | ||||| |||| ||||||||||||  ||||||||||||||||||||    
T  8155789 ggagctaaaattgcaagtttttgaaagtt--agggggaaaagtgcacttta 8155741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 21178123 - 21177998
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||||  |||| || ||||| ||||||  |||||||| |||  || ||||||||||||||||||| ||||||||| |||||| |||||||| |||||    
T  21178123 aaaattggcaaaaatgatcaaagttgcaaaagggctaaattttagggggtcaaaattgtagtttttgttcataggggatcaaaattgcaactttatgaaa 21178024  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    ||||| ||||| ||||| |||||||||    
T  21178023 gttag-ggggggaaagtacactttagc 21177998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 92 - 186
Target Start/End: Original strand, 26421628 - 26421721
Alignment:
Q  92 ggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||  || ||||||||||||||||||||| |||| |  |||||| |||| ||||||||||||||| ||||||||||||||||||||    
T  26421628 ggctaaatcttaaggggtcaaaattgtagtttttgtacttaggaggtcaaaattgcaagtttttgaaagttaga-ggggaaaagtgcactttagc 26421721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 1964401 - 1964541
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| ||||| ||||||| | ||||||||||     |||||| || ||| |||||  ||| |||||||||||||||||| |||||||| |||||||     
T  1964401 gcgttgacttggtcaaaattgctaaaaaggaccactatcgcaaaggggataattcttaagggaccaaaattgtagtttttgttcatagggggccaaaatt 1964500  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    | |||||||| |||||||  || ||||||||||||||||||    
T  1964501 gtaactttttaaaagttaagggtggaaaagtgcactttagc 1964541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 17383069 - 17382994
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||||||||||||||| || ||||||||||| |||| |||||||||||||| ||| |||||||||||||||||    
T  17383069 caaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagttag-gggagaaaagtgcactttagc 17382994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 17388235 - 17388310
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||||||||| ||||| || ||||||||||| |||| |||||||||||||| |||||||||||||||||||||    
T  17388235 caaaattgtagtttatgtacttaagggaccaaaattgcaagtttttgaaagttag-gggggaaaagtgcactttagc 17388310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 69 - 185
Target Start/End: Original strand, 19750558 - 19750673
Alignment:
Q  69 caaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagaggg 168  Q
    |||||||| ||||  ||||| | ||||||||||||  ||   ||||||||||||||||||| |||||| ||||||| |||| ||||| |||||||| |||    
T  19750558 caaaaggatcaaatttgcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttag-ggg 19750656  T
Q  169 ggaaaagtgcactttag 185  Q
    |||||||||||||||||    
T  19750657 ggaaaagtgcactttag 19750673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 69 - 185
Target Start/End: Complemental strand, 19789248 - 19789133
Alignment:
Q  69 caaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagaggg 168  Q
    |||||||| ||||  ||||| | ||||||||||||  ||   ||||||||||||||||||| |||||| ||||||| |||| ||||| |||||||| |||    
T  19789248 caaaaggatcaaatttgcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttag-ggg 19789150  T
Q  169 ggaaaagtgcactttag 185  Q
    |||||||||||||||||    
T  19789149 ggaaaagtgcactttag 19789133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 60 - 184
Target Start/End: Original strand, 35935507 - 35935631
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||||||| ||||||||  |||| ||||| ||||||||||||||  ||  |||||||||||||| ||||| |||||| | ||||| |||| ||||| |||    
T  35935507 aaaattggccaaaaggattaaagttgcaatgaggctaaatcttagggggccaaaattgtagtttatgtacttagggggctaaaattgcaaatttttaaaa 35935606  T
Q  160 gttagagggggaaaagtgcacttta 184  Q
    ||||  ||||| |||||||||||||    
T  35935607 gttaagggggggaaagtgcacttta 35935631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 8758844 - 8758935
Alignment:
Q  93 gctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    |||||||||||  ||  |||||||||||||| ||||| |||||| ||||||| |||| |||||||||||||  |||||||||||||| ||||    
T  8758844 gctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcatttta 8758935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 184
Target Start/End: Complemental strand, 1289248 - 1289100
Alignment:
Q  36 tgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttat-aggatcaaaattgtagtttttgtacatagg 134  Q
    |||||| || ||||||| | ||| |||||||  |||||||||||||||||||| | || |||||||||  ||| | ||||||||||||||| ||| |||     
T  1289248 tgccacttaagcgttgactcggtcaaaattgaccaaaaggaccaaagatgcaagggggttaaatcttaagaggct-aaaattgtagtttttatacttaga 1289150  T
Q  135 ggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    ||| ||||||  ||| | |||||||||||  ||||||||||| |||||||    
T  1289149 ggatcaaaattacaaatatttgaaagttaaggggggaaaagttcacttta 1289100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 46638685 - 46638802
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| || || ||||||| |||||| ||| |||| ||||||| | ||||||||||  ||   ||||||||| ||||||| ||||||||| ||||||     
T  46638685 gcgttgactttgtcaaaattgatcaaaaagactaaagttgcaaagggactaaatcttagggggctaaaattgtaatttttgttcataggggatcaaaatt 46638784  T
Q  146 gcaactttttgaaagtta 163  Q
     |||||||||||||||||    
T  46638785 ccaactttttgaaagtta 46638802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 92 - 186
Target Start/End: Complemental strand, 8757769 - 8757676
Alignment:
Q  92 ggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||  ||  |||||||||||||| ||||| |||||| | ||||| | || ||||||||||||| ||||| ||||||||||||||||    
T  8757769 ggctaaatcttaagggtccaaaattgtagtttctgtacttagggggctaaaattgtaagtttttgaaagtta-aggggaaaaagtgcactttagc 8757676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 49306900 - 49306776
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||| | ||||||||||||||||||||  | ||||||| ||| ||  |||||||||||||||||||| ||   | ||||||| |||| |||||||||    
T  49306900 aaaattgataaaaaggaccaaagatgcaaaatgactaaatcatattgg-gcaaaattgtagtttttgtacttaaatggccaaaattgcaagtttttgaaa 49306802  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    ||| | |||  ||||||||||||||||    
T  49306801 gtt-gggggaaaaaagtgcactttagc 49306776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 52491581 - 52491707
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||||||  ||||||||  |||| ||||| | |||||||| |||  ||  |||||||||||||| ||||  ||| |||||||||| |||| |||||||||    
T  52491581 aaaattgaccaaaaggattaaagttgcaatggggctaaattttagggggccaaaattgtagtttctgtatttagaggaccaaaattgcaagtttttgaaa 52491680  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    ||||  || |||||||| |||||||||    
T  52491681 gttaagggtggaaaagtacactttagc 52491707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 55603555 - 55603628
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    |||||| |||||||||||||| ||||||  ||||| |||| ||||||||||||| ||||| ||||||||||||||    
T  55603555 caaaatagtagtttttgtacacaggggattaaaattgcaagtttttgaaagtta-aggggaaaaagtgcacttta 55603628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 37727837 - 37727721
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| ||||| |||||||   |||| |||||||||| ||||||| ||||||||||  || | |||||||||||||||||| ||| | | |||||||     
T  37727837 gcgttgatttggtcaaaattgactaaaatgaccaaagatacaaagagactaaatcttaaggggttaaaattgtagtttttgtatataagag-ccaaaatt 37727739  T
Q  146 gcaactttttgaaagtta 163  Q
     ||||||||| |||||||    
T  37727738 acaactttttaaaagtta 37727721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 35934450 - 35934347
Alignment:
Q  79 aaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgc 178  Q
    |||| ||||| | ||||||||||||  ||  ||||||| || ||| | ||| ||||||||||||||  ||| ||||||||||||  ||||||||||||||    
T  35934450 aaagttgcaatggggctaaatcttaaggggccaaaattataatttctttacttaggggaccaaaattacaagtttttgaaagtt--agggggaaaagtgc 35934353  T
Q  179 acttta 184  Q
    ||||||    
T  35934352 acttta 35934347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 55602451 - 55602379
Alignment:
Q  111 aaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    ||||||||||||||| || |||| |||| ||||| |||| ||||||||||||| | |||||||| |||||||||    
T  55602451 aaaattgtagtttttatatatagaggactaaaattgcaagtttttgaaagtta-aaggggaaaaatgcacttta 55602379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 18259358 - 18259414
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||||||||||| |||||||| |||||||| |||||||| | ||||||    
T  18259358 atagggggccaaaatcgcaacattttgaaatttagagggcgaaaagtgaagtttagc 18259414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 9195909 - 9195956
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtg 177  Q
    ||||||||||||||||||||| |||||||| |||| ||| ||||||||    
T  9195909 ataggggaccaaaatcgcaacattttgaaatttagggggcgaaaagtg 9195956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 184
Target Start/End: Original strand, 27257960 - 27258057
Alignment:
Q  86 caaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    ||||| ||||||||||||  || | ||||||| |||||||||| |||| ||  |||||| |||||||||| ||||||| |||||  |||||||| ||||    
T  27257960 caaaggggctaaatcttaaggggttaaaattggagtttttgtatatagagggtcaaaattgcaactttttaaaagtta-aggggagaaagtgcatttta 27258057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 54107991 - 54107949
Alignment:
Q  55 tggttaaaattggtcaaaaggaccaaagatgcaaagaggctaa 97  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||    
T  54107991 tggttaaaattggccaaaaagaccaaagatgcaaaggggctaa 54107949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 177
Target Start/End: Original strand, 21539065 - 21539162
Alignment:
Q  80 aagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtg 177  Q
    |||||||||||  |||||||||||  || |||||||||||||||||  || |||| | ||||||| |||| ||||| ||| |||  || |||||||||    
T  21539065 aagatgcaaaggagctaaatcttagggggtcaaaattgtagtttttacacttaggaggccaaaattgcaagtttttaaaaattaagggtggaaaagtg 21539162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 13209724 - 13209764
Alignment:
Q  139 caaaatcgcaactttttgaaagttagagggggaaaagtgca 179  Q
    |||||||||||||||| |||||||||||||  |||||||||    
T  13209724 caaaatcgcaacttttggaaagttagagggccaaaagtgca 13209764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 20919411 - 20919336
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||||| ||||| || |||| | |||||||||||||| |||||||| |||| ||  |||||||||| ||||||    
T  20919411 caaaattgtaattttttta-atagagaaccaaaatcgcaacattttgaaacttaggggtcgaaaagtgcagtttagc 20919336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 163
Target Start/End: Original strand, 23759831 - 23759863
Alignment:
Q  131 taggggaccaaaatcgcaactttttgaaagtta 163  Q
    ||||||||||||||||||||||| |||||||||    
T  23759831 taggggaccaaaatcgcaactttatgaaagtta 23759863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 41877279 - 41877327
Alignment:
Q  138 ccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||| |||||||| |||||||| |||||||| | ||||||    
T  41877279 ccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagc 41877327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 46637758 - 46637706
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagtt 162  Q
    ||||||||||||||||||||||||||  | |||||| ||| ||||| ||||||    
T  46637758 caaaattgtagtttttgtacatagggagctaaaatcacaagtttttaaaagtt 46637706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 1e-39; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 21505541 - 21505417
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||||||  |||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||| || |||| ||||||||||||||||||||||    
T  21505541 aaaattgtccaaaaggaccaaagatgcaaaggggctaaatcttatggggtcaaaattgtagtttttgtatatcgggggccaaaatcgcaactttttgaaa 21505442  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    |||  ||||||||||||||||||||||    
T  21505441 gtt--agggggaaaagtgcactttagc 21505417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 35 - 186
Target Start/End: Original strand, 7501801 - 7501952
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagg 134  Q
    |||||||||| || ||||||  || |||||||  |||||||||||||||||||||| ||||| ||||||  ||  ||||||||| |||||  ||| ||||    
T  7501801 ctgccacgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctacatcttaaggggccaaaattgttgttttgatacttagg 7501900  T
Q  135 ggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    || ||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  7501901 gggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagc 7501952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 35 - 186
Target Start/End: Complemental strand, 18371576 - 18371425
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagg 134  Q
    |||||||||| |||||||||  || |||||||  |||||||| ||||||||||||   |||||||||||  ||  |||||||||||||||||||| || |    
T  18371576 ctgccacgtaggcgttgaataagtcaaaattgaccaaaaggatcaaagatgcaaatgtgctaaatcttagggggccaaaattgtagtttttgtacttaag 18371477  T
Q  135 ggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    || ||||||| |||| ||||||||||||||  ||||||||||||||||||||    
T  18371476 gggccaaaattgcaagtttttgaaagttaggaggggaaaagtgcactttagc 18371425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 3227554 - 3227694
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| | ||| ||||||| ||||||||||||||| ||||| | ||||||||||||  ||  | ||||||| ||||| |||| |||||| |||||||     
T  3227554 gcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggtgctaaattgtggttttggtacttagggggccaaaatt 3227653  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  3227654 gcaagtttttgaaagttagggggggaaaagtgcactttagc 3227694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 47525327 - 47525467
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| | ||| ||||||||||||||||||||||| ||||| | ||||||||||||  ||  | ||||||| |||||  ||| |||||| | |||||     
T  47525327 gcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttgatacttagggggctaaaatt 47525426  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  47525427 gcaagtttttgaaagttagagggggaaaagtgcactttagc 47525467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 35 - 186
Target Start/End: Complemental strand, 7500606 - 7500456
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagg 134  Q
    |||||||||| |||||||||  || |||||||  |||||||| ||||||||||||| ||||||||||||  ||  ||||||||| |||| | ||| |||     
T  7500606 ctgccacgtaggcgttgaataagtcaaaattgaccaaaaggatcaaagatgcaaaggggctaaatcttagggggccaaaattgtggtttctatacttaga 7500507  T
Q  135 ggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||| |||||| |||| ||||||||||||| ||||||||||||||||||||||    
T  7500506 ggatcaaaattgcaagtttttgaaagtta-agggggaaaagtgcactttagc 7500456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 46 - 185
Target Start/End: Complemental strand, 17781802 - 17781663
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||| | ||||||||||||  ||    ||||||| ||||| |||| ||||||  ||||||     
T  17781802 gcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaatt 17781703  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttag 185  Q
    |||| |||||||||||||| ||||||||||||||||||||    
T  17781702 gcaagtttttgaaagttagggggggaaaagtgcactttag 17781663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 37 - 186
Target Start/End: Complemental strand, 22629636 - 22629484
Alignment:
Q  37 gccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagggg 136  Q
    |||||||| |||||||||  || |||||||  |||||||||||||||||||||| ||||||||||||  ||  |||||||||||||||||||| |||| |    
T  22629636 gccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagtttttgtacttaggag 22629537  T
Q  137 accaaaatcgcaactttttgaaagtta---gagggggaaaagtgcactttagc 186  Q
     |||||||  ||| ||||||||| |||   ||||||||||| |||||||||||    
T  22629536 gccaaaattacaagtttttgaaaattaagggagggggaaaaatgcactttagc 22629484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 127476 - 127338
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| | ||| ||||||||||||||||||||||| |||||   ||||||||||||  ||  | ||||||| ||||| |||| ||||||||||||||     
T  127476 gcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaattgggctaaatcttaggggg-ctaaattgtggttttggtacttaggggaccaaaatt 127378  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  127377 gcaagtttttgaaagttag-gggggaaaagtgcactttagc 127338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 22630412 - 22630552
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    |||||||||  || |||||||  |||||||||||||||| |||||||||| |||||||  ||   ||||||||||||||||||  |||||| |||||||     
T  22630412 gcgttgaataagtcaaaattgaccaaaaggaccaaagatacaaagaggctgaatcttagggggctaaaattgtagtttttgtaattagggggccaaaatt 22630511  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||| |||||||||||||  | |||||||||||||||||||    
T  22630512 gcaagtttttgaaagttatggagggaaaagtgcactttagc 22630552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 31949463 - 31949323
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| | ||| ||||||| ||||||||||||||| ||||| | ||||||||||||  ||  | ||||||| ||||| |||| |||||| |||||||     
T  31949463 gcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaatt 31949364  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||| ||||||||| |||| | |||||||||||||||||||    
T  31949363 gcaagtttttgaaaattagggagggaaaagtgcactttagc 31949323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 31949762 - 31949902
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| | ||| ||||||| ||||||||||||||| ||||| | ||||||||||||  ||  | ||||||| ||||| |||  |||||| |||||||     
T  31949762 gcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggtgctaaattgtggttttggtatttagggggccaaaatt 31949861  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||| |||||||||||||| ||||||| |||||||||||||    
T  31949862 gcaagtttttgaaagttagggggggaagagtgcactttagc 31949902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 18372418 - 18372544
Alignment:
Q  47 cgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcg 146  Q
    ||||||||  || |||||||  |||||||||||||||| ||||| ||||||||||||  ||  |||||||||||||||||||| |||||| ||||||| |    
T  18372418 cgttgaataagtcaaaattgaccaaaaggaccaaagatacaaaggggctaaatcttagggggccaaaattgtagtttttgtacttagggggccaaaattg 18372517  T
Q  147 caactttttgaaagttagagggggaaaa 174  Q
    ||| ||||||||| |||| |||||||||    
T  18372518 caagtttttgaaaattag-gggggaaaa 18372544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 3227248 - 3227109
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| | ||| ||||||| ||||||||||||||| ||||| | ||||||||||||  ||  | ||||||| ||||| |||| |||||| |||||||     
T  3227248 gcgttgactaggtcaaaattgttcaaaaggaccaaagttgcaatggggctaaatcttaagggggctaaattgtggttttggtacttagggggccaaaatt 3227149  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||| ||||||||| |||| ||||| |||||||||||||||    
T  3227148 gcaagtttttgaaaattag-ggggggaaagtgcactttagc 3227109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 112 - 186
Target Start/End: Original strand, 17782579 - 17782653
Alignment:
Q  112 aaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||| |||| |||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  17782579 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagc 17782653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 30439332 - 30439457
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||||||  ||||| |||| ||| ||||||| ||||||||||||  |||  |||||||||||||||| |||||||  | |||||||| ||||||||||||    
T  30439332 aaaattgagcaaaatgaccgaaggtgcaaaggggctaaatcttaggggactaaaattgtagtttttgaacataggaaatcaaaatcgtaactttttgaaa 30439431  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    |||| |||||  |||||||||||||||    
T  30439432 gtta-aggggagaaagtgcactttagc 30439457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 31659750 - 31659623
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||||||  |||||||| ||||  ||||| | ||||||||||||  ||  |||||||||||||||||||| ||||||  |||||| | || |||||||||    
T  31659750 aaaattgaccaaaaggatcaaatttgcaatggggctaaatcttagggggccaaaattgtagtttttgtacttagggggtcaaaattgtaagtttttgaaa 31659651  T
Q  160 gttagaggggg-aaaagtgcactttagc 186  Q
    ||||| ||||| ||||||||||||||||    
T  31659650 gttagggggggtaaaagtgcactttagc 31659623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 11658456 - 11658380
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||||||||||||||||| | ||||| |||  |||||||||||||  |||||||||||||| ||||||    
T  11658456 caaaattgtagtttttgtacatagggggctaaaattgcatgtttttgaaagttaaggggggaaaagtgcaatttagc 11658380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 60 - 184
Target Start/End: Original strand, 42886260 - 42886384
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||||||  ||||| || ||||||||||||  ||||||||||||  ||   ||||||||||||||||||  ||||||  |||||| |||| |||||||||    
T  42886260 aaaattgaccaaaatgatcaaagatgcaaatgggctaaatcttagggggctaaaattgtagtttttgtatttagggggtcaaaattgcaaatttttgaaa 42886359  T
Q  160 gttagagggggaaaagtgcacttta 184  Q
    |||||  || |||||||||||||||    
T  42886360 gttaggaggagaaaagtgcacttta 42886384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 20163585 - 20163656
Alignment:
Q  115 ttgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||||||||||||||||  ||||||| |||| |||||||||||||| || ||| ||||||||||||||    
T  20163585 ttgtagtttttgtacatagggagccaaaattgcaagtttttgaaagttaggggtggagaagtgcactttagc 20163656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 47524599 - 47524532
Alignment:
Q  113 aattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcac 180  Q
    |||||| ||||| |||| |||||| ||||||| |||| ||||||||||||||||||||||||||||||    
T  47524599 aattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcac 47524532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 34352760 - 34352886
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||||||| ||||| ||  |||| |||||  ||| ||||||||| |||  ||||||| |||||| ||||| || ||||||||||| | || |||||||||    
T  34352760 aaaattggccaaaatgattaaagttgcaataaggttaaatcttagagggccaaaattatagtttatgtacttaagggaccaaaatagaaagtttttgaaa 34352859  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
     ||||||| | ||||||||||||||||    
T  34352860 attagaggtgaaaaagtgcactttagc 34352886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 182
Target Start/End: Original strand, 14999140 - 14999249
Alignment:
Q  71 aaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagaggggg 170  Q
    |||||| ||||||||||||| ||||||||||||  |   |||||||||||||||||||  ||||||  |||||| ||||  |||||||| |||| |||||    
T  14999140 aaaggaacaaagatgcaaaggggctaaatcttagggcgccaaaattgtagtttttgtatttagggggtcaaaattgcaa-gttttgaaaattag-ggggg 14999237  T
Q  171 aaaagtgcactt 182  Q
    ||||||||||||    
T  14999238 aaaagtgcactt 14999249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 186
Target Start/End: Complemental strand, 47369933 - 47369782
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagg 134  Q
    ||||||| || |||||||||  || |||||||  |||||  || |||||||||||| ||||||||||||  ||  ||||||| |||||||||||| || |    
T  47369933 ctgccacataggcgttgaataagtcaaaattgaccaaaataactaaagatgcaaaggggctaaatcttaaggggccaaaattatagtttttgtacttatg 47369834  T
Q  135 ggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
     | | ||||| |||| |||||||||||||| ||   ||||||||| ||||||    
T  47369833 aggctaaaattgcaagtttttgaaagttaggggaaaaaaagtgcattttagc 47369782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 186
Target Start/End: Original strand, 31660992 - 31661109
Alignment:
Q  69 caaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagaggg 168  Q
    |||||||| ||||  ||||| |||| ||||| |||  |||  |||||| |||||||||||| ||  ||  |||||| |||| |||||||||||||||| |    
T  31660992 caaaaggatcaaatttgcaatgaggttaaattttaggggactaaaattatagtttttgtacgtaaagggtcaaaattgcaaatttttgaaagttagagag 31661091  T
Q  169 ggaaaagtgcactttagc 186  Q
    || |||||||||||||||    
T  31661092 gggaaagtgcactttagc 31661109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 185
Target Start/End: Complemental strand, 46482748 - 46482599
Alignment:
Q  36 tgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggg 135  Q
    ||||||||| || ||||||  || |||||||  ||||||||  ||| ||||||||  | |||||||||  |||| |||||| ||||||||||||||||||    
T  46482748 tgccacgtaggcattgaataagtcaaaattgaccaaaaggataaaaaatgcaaaggagataaatcttaggggattaaaattatagtttttgtacataggg 46482649  T
Q  136 gaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttag 185  Q
    |  |||| |  ||| ||||||||| ||||  || ||||| ||||||||||    
T  46482648 ggtcaaatttacaaatttttgaaaattaggaggagaaaaatgcactttag 46482599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 184
Target Start/End: Original strand, 128575 - 128699
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||||| ||||||  ||||| ||||| | |||| |||||||  ||  | ||||||| ||||| |||| ||||||  |||||| |||| |||||||||    
T  128575 aaaattggttaaaagggtcaaagttgcaatggggctgaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaaatttttgaaa 128674  T
Q  160 gttagagggggaaaagtgcacttta 184  Q
    ||||  | |||||||||||||||||    
T  128675 gttatggtgggaaaagtgcacttta 128699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 48934923 - 48935003
Alignment:
Q  106 ggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||| |||||||||||| ||| ||  ||||||  ||| |||||||||||||| || |||||| |||||||||||    
T  48934923 ggatcaaaattttagtttttgtacttagagggtcaaaattacaagtttttgaaagttaggggtggaaaaatgcactttagc 48935003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 597256 - 597327
Alignment:
Q  56 ggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtac 129  Q
    ||||||||||| |||||| |||||| ||||||||  | ||||||  |||||| |||||||||||||||||||||    
T  597256 ggttaaaattgatcaaaatgaccaaggatgcaaatggactaaat--tatagggtcaaaattgtagtttttgtac 597327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 11662575 - 11662649
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    ||||||| |||||||||||||||| |  | ||||| |||| |||||||||||||  ||||||||| |||||||||    
T  11662575 caaaattatagtttttgtacatagagagctaaaattgcaagtttttgaaagttaaggggggaaaaatgcacttta 11662649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 14998109 - 14998064
Alignment:
Q  58 ttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatctta 103  Q
    |||||||||  |||||||||||||||||||||| ||||||||||||    
T  14998109 ttaaaattgaccaaaaggaccaaagatgcaaaggggctaaatctta 14998064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 15681653 - 15681596
Alignment:
Q  129 cataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||||||||||||||||| ||| |||  ||| ||||||| |||||||||    
T  15681653 cataggggaccaaaatcgcaactttttaaaacttaatgggtgaaaagttcactttagc 15681596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 186
Target Start/End: Original strand, 34174010 - 34174082
Alignment:
Q  113 aattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||| ||||| |||| |||||| ||||||| ||||  ||||||||| ||| |||||||||||||||||||||    
T  34174010 aattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-gggggaaaagtgcactttagc 34174082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 8527041 - 8527097
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||||||||||| ||||||||  ||| ||| |||||||||||||||||    
T  8527041 atagggggccaaaatcgcaacattttgaaatatagggggcgaaaagtgcactttagc 8527097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 42303373 - 42303449
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||||  ||||| || |||| ||||||||||||||||||||||||| |||| ||  || ||||||| ||||||    
T  42303373 caaaattgtcatttttttaaatagaggaccaaaatcgcaactttttgaaacttaggggtcgagaagtgcagtttagc 42303449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 60 - 155
Target Start/End: Complemental strand, 48933792 - 48933699
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaacttttt 155  Q
    ||||||||  ||||||| ||||| ||||  |||| |||||||||  ||||||||||||||||||||||  ||| |||| |||||| |||| |||||    
T  48933792 aaaattggaaaaaaggatcaaagttgca--gaggataaatcttaagggatcaaaattgtagtttttgtttataagggatcaaaattgcaagttttt 48933699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 18754513 - 18754560
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtg 177  Q
    ||||||||||||||||||||| |||||||| |||| ||| ||||||||    
T  18754513 ataggggaccaaaatcgcaacattttgaaacttagggggcgaaaagtg 18754560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 163
Target Start/End: Original strand, 3148177 - 3148206
Alignment:
Q  134 gggaccaaaatcgcaactttttgaaagtta 163  Q
    ||||||||||||||||||||||||||||||    
T  3148177 gggaccaaaatcgcaactttttgaaagtta 3148206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 20636856 - 20636921
Alignment:
Q  121 tttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||| || |||||||  |||||||||||| ||||||||  ||| ||| |||||||||||||||||    
T  20636856 tttttttaaatagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagc 20636921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 1450400 - 1450448
Alignment:
Q  131 taggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgca 179  Q
    |||||| ||||||||||||| ||| ||||| |||||||| |||||||||    
T  1450400 taggggtccaaaatcgcaacctttagaaagatagaggggcaaaagtgca 1450448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 17305821 - 17305765
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||||||||||| |||||||| |||||||  |||||||| | ||||||    
T  17305821 atagggggccaaaatcgcaacattttgaaacttagaggacgaaaagtgaagtttagc 17305765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 19919848 - 19919904
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||  |||||||||||| |||||||| |||||||| |||||||| | ||||||    
T  19919848 atagggggtcaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagc 19919904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 27869253 - 27869197
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||  |||||||||||| ||||||||  ||| ||| |||||||||||||||||    
T  27869253 atagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagc 27869197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 4e-39; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 46 - 184
Target Start/End: Complemental strand, 42195273 - 42195137
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| ||||| |||||||  |||||||||||||||||||||| ||||||||||||  ||| ||||||||||| ||||||||||||||| ||||||||    
T  42195273 gcgttgacttggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttaggggaccaaaattgtagattttgtacatagggggccaaaatc 42195174  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  42195173 gcaacttttt-aaagtta-agggggaaaagtgcacttta 42195137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 37 - 186
Target Start/End: Complemental strand, 25523219 - 25523070
Alignment:
Q  37 gccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagggg 136  Q
    |||||||| |||||||||   | ||||||| ||||||||| ||||||||||||| ||||||||||||  || ||||||||||||||||||||| ||||||    
T  25523219 gccacgtaggcgttgaataaatcaaaattgatcaaaaggatcaaagatgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggg 25523120  T
Q  137 accaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
     | ||||| |||| |||||||||||||  |||||||||||||||||||||    
T  25523119 gctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagc 25523070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 35 - 186
Target Start/End: Complemental strand, 19753063 - 19752913
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagg 134  Q
    |||||||||| |||||||||  || |||||||  |||||||||||||||||||| | ||||||||| ||  ||  |||||||||||||||||||| ||||    
T  19753063 ctgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaatggggctaaatcatagggggccaaaattgtagtttttgtacttagg 19752964  T
Q  135 ggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    || ||||||| |||| |||||||||||||| |||||||||||||||||||||    
T  19752963 gggccaaaattgcaagtttttgaaagttag-gggggaaaagtgcactttagc 19752913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 24333045 - 24332916
Alignment:
Q  55 tggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttt 154  Q
    |||| |||||||  |||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||| ||| ||||||| |||| ||||    
T  24333045 tggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtagtttttgtacataaggggccaaaattgcaagtttt 24332946  T
Q  155 tgaaagttagagggggaaaagtgcacttta 184  Q
    ||||| |||  |||| ||||||||||||||    
T  24332945 tgaaacttaagggggaaaaagtgcacttta 24332916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 5778796 - 5778936
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| | ||| ||||||||||||||||||||||| ||||| | ||||||||||||  ||  | ||||||| ||||| |||| |||||| | |||||     
T  5778796 gcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggcaaaaatt 5778895  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  5778896 gcaagtttttgaaagttagagggggaaaagtgcactttagc 5778936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 42196160 - 42196300
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| ||||| |||||||  |||||||||||||||||||||  ||||||||||||  |||  |||| |||||||||||||||||| || ||||| ||    
T  42196160 gcgttgacttggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttaggggactaaaaatgtagtttttgtacatagagggccaaattc 42196259  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
     ||||||||| |||||||| ||||| |||||||||||||||    
T  42196260 acaactttttaaaagttaggggggggaaagtgcactttagc 42196300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 35 - 186
Target Start/End: Original strand, 18486851 - 18487002
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagg 134  Q
    |||||||||| |||||||||  || |||||||  |||||||||||||||||||||| ||||||||||||  ||  ||||||||| |||| | ||| ||||    
T  18486851 ctgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgtggtttctatacttagg 18486950  T
Q  135 ggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    || ||||||| |||| |||||||||||||  ||||| |||||||||||||||    
T  18486951 gggccaaaattgcaagtttttgaaagttaagggggggaaagtgcactttagc 18487002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 25055539 - 25055413
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||| ||||||||||||||||||||||  ||||||||||||  ||  |||||||||||||||| ||||||||||| |||||| ||||    || |||    
T  25055539 aaaattgatcaaaaggaccaaagatgcaaatgggctaaatcttagggggccaaaattgtagtttttatacataggggatcaaaattgcaagaagtttaaa 25055440  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    |||||||||||||||||||||||||||    
T  25055439 gttagagggggaaaagtgcactttagc 25055413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 36 - 186
Target Start/End: Original strand, 22940573 - 22940722
Alignment:
Q  36 tgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggg 135  Q
    |||||| || ||||||| ||||| |||||||  ||||||||  ||||||| |||| |||||||| |||  || ||||||||||| ||||||||| |||||    
T  22940573 tgccacttaggcgttgacttggtcaaaattgaccaaaaggataaaagatgaaaaggggctaaattttagggg-tcaaaattgtaatttttgtacttaggg 22940671  T
Q  136 gaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    | ||||||| |||| |||||||||||||  |||||||||||||||||||||    
T  22940672 ggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagc 22940722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 2186902 - 2186774
Alignment:
Q  55 tggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttt 154  Q
    |||| |||||||  ||||||||||||||||| |||  ||||||||||||  |||| |||||||||||||||||||||||  ||||||||| |||||||||    
T  2186902 tggtcaaaattgaccaaaaggaccaaagatgtaaaatggctaaatcttaggggattaaaattgtagtttttgtacatagaagaccaaaattgcaactttt 2186803  T
Q  155 tgaaagttagagggggaaaagtgcacttta 184  Q
    ||||| |||| |||| |||| |||||||||    
T  2186802 tgaaacttag-ggggaaaaaatgcacttta 2186774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 38 - 186
Target Start/End: Original strand, 19754082 - 19754231
Alignment:
Q  38 ccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagggga 137  Q
    ||||||| |||||||||  || ||||||| ||||||||||||||||||||| | ||||||||| ||  ||  |||||||||||||||||||  ||||||     
T  19754082 ccacgtaggcgttgaataagtcaaaattgttcaaaaggaccaaagatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttaggggg 19754181  T
Q  138 ccaaaatcgcaactttttgaaagttagagggg-gaaaagtgcactttagc 186  Q
    ||||||| |||| |||||||||||||| ||||  |||| |||||||||||    
T  19754182 ccaaaattgcaagtttttgaaagttaggggggaaaaaaatgcactttagc 19754231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 70 - 186
Target Start/End: Complemental strand, 21835157 - 21835042
Alignment:
Q  70 aaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggg 169  Q
    ||||||| ||||| ||||||| || |||||||||  || ||||||||||||||||||||||||||||  ||||||| ||||||||| ||| |||||||||    
T  21835157 aaaaggatcaaagttgcaaaggggttaaatcttagggggtcaaaattgtagtttttgtacatagggggtcaaaatcacaactttttcaaacttagagggg 21835058  T
Q  170 gaaaagtgcactttagc 186  Q
    | |||||||||||||||    
T  21835057 g-aaagtgcactttagc 21835042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 184
Target Start/End: Original strand, 2686355 - 2686501
Alignment:
Q  40 acgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggacc 139  Q
    ||||| |||||||||  || ||||||| ||||||||||||||||||||| ||||||||||| ||  ||| ||||||| |||||||||||| || | || |    
T  2686355 acgtaggcgttgaataagtcaaaattgatcaaaaggaccaaagatgcaatgaggctaaatcataggggaccaaaattatagtttttgtacttaagagatc 2686454  T
Q  140 aaaatcgcaactttttgaaagttagag--ggggaaaagtgcacttta 184  Q
    ||||| |||| ||||| ||||||||||  |||| |||||||||||||    
T  2686455 aaaattgcaagtttttaaaagttagaggagggggaaagtgcacttta 2686501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 49 - 137
Target Start/End: Complemental strand, 16650130 - 16650042
Alignment:
Q  49 ttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagggga 137  Q
    |||| ||||| |||||||  |||||||||||||||||||||| || ||||||||| ||| ||||||||||||||||||||| |||||||    
T  16650130 ttgacttggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtagtttttgtacttagggga 16650042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 70 - 182
Target Start/End: Original strand, 36486472 - 36486584
Alignment:
Q  70 aaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggg 169  Q
    ||||||| ||||| ||||||| | ||||||||||  ||| |||||||||||||||||||| ||||||  |||||| |||| ||||| |||||||| ||||    
T  36486472 aaaaggatcaaagttgcaaagggactaaatcttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagggggg 36486571  T
Q  170 gaaaagtgcactt 182  Q
     ||||||||||||    
T  36486572 aaaaagtgcactt 36486584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 1015618 - 1015492
Alignment:
Q  53 attggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactt 152  Q
    |||||| ||||||||  |||||||||||| |||||||| | |||| |||||  || | |||||||||| ||||||||| ||||| ||||||| | |||||    
T  1015618 attggtcaaaattggggaaaaggaccaaatatgcaaagggactaattcttagggggttaaaattgtaggttttgtacacagggggccaaaattgtaactt 1015519  T
Q  153 tttgaaagttagagggggaaaagtgca 179  Q
    ||| |||||||| || |||||||||||    
T  1015518 tttaaaagttaggggaggaaaagtgca 1015492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 25524047 - 25524156
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagg 134  Q
    |||||||||| |||||||||  || |||||||  ||||||||| |||||||||||| ||||||||||||  || |||||||| |||||||||||| ||||    
T  25524047 ctgccacgtaggcgttgaataagtcaaaattgaccaaaaggactaaagatgcaaaggggctaaatcttagggggtcaaaattatagtttttgtacttagg 25524146  T
Q  135 ggaccaaaat 144  Q
     | |||||||    
T  25524147 aggccaaaat 25524156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 16650815 - 16650955
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| ||| | |||||||  |||||||||||||||||||||  ||||||| ||||  ||   ||||||||||||||| ||| ||||||  ||||||     
T  16650815 gcgttgacttgatcaaaattgaccaaaaggaccaaagatgcaaatgggctaaaccttagggggctaaaattgtagtttttatacttagggggtcaaaatt 16650914  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||| ||||| |||||||  || ||||||||||||||||||    
T  16650915 gcaagtttttaaaagttaagggtggaaaagtgcactttagc 16650955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 70 - 186
Target Start/End: Complemental strand, 28538793 - 28538677
Alignment:
Q  70 aaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggg 169  Q
    ||||||| ||||| ||||||| ||||||||||||  ||   ||||||||||||||||||| || |||  |||||| |||| |||||||||||||  || |    
T  28538793 aaaaggatcaaagttgcaaaggggctaaatcttagggggctaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttacgggtg 28538694  T
Q  170 gaaaagtgcactttagc 186  Q
    |||||||||||||||||    
T  28538693 gaaaagtgcactttagc 28538677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 60 - 184
Target Start/End: Original strand, 28539794 - 28539917
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||||  ||||||| ||||| ||||||| | ||||||||||  ||| |||||||||||||||||||| ||| ||  |||||| |||| ||||| |||    
T  28539794 aaaattggcaaaaaggatcaaagttgcaaagggactaaatcttaggggaccaaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaa 28539893  T
Q  160 gttagagggggaaaagtgcacttta 184  Q
    ||||| ||||||||| |||||||||    
T  28539894 gttag-gggggaaaaatgcacttta 28539917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 64 - 186
Target Start/End: Complemental strand, 5778022 - 5777902
Alignment:
Q  64 ttggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagtta 163  Q
    ||||||||||||||||||| ||||| | ||||||||||||  ||  | ||||||| ||||| |||| ||||||  |||||| |||| ||||||||||||     
T  5778022 ttggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagtt- 5777924  T
Q  164 gagggggaaaagtgcactttagc 186  Q
     |||||| |||||||||||||||    
T  5777923 -aggggggaaagtgcactttagc 5777902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 76 - 186
Target Start/End: Original strand, 25056370 - 25056481
Alignment:
Q  76 accaaagatgcaaa-gaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaa 174  Q
    |||||||||| ||| ||||||||||||||  || ||||||||||||||||  ||| ||||||  |||||| |||| ||||||||||||||  | ||||||    
T  25056370 accaaagatgtaaatgaggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggagtggaaaa 25056469  T
Q  175 gtgcactttagc 186  Q
    ||||||||||||    
T  25056470 gtgcactttagc 25056481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 1796135 - 1796055
Alignment:
Q  106 ggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||||||||||||||||||| |||| | ||||| | |||| |||||||||||||| || |||||| |||||||||||    
T  1796135 ggatcaaaattgtagtttttgtacttaggtggccaaagttgcaagtttttgaaagttaggggtggaaaaatgcactttagc 1796055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 35 - 186
Target Start/End: Complemental strand, 18485297 - 18485139
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaa-------ttgtagtttttgt 127  Q
    |||||||||| |||||||||  || ||||||   |||||||| ||||||||||||| ||||||||||||  ||  |||||       |||| |||||  |    
T  18485297 ctgccacgtaggcgttgaataagtcaaaattaaccaaaaggatcaaagatgcaaaggggctaaatcttagggggccaaaacccaaaattgttgttttgat 18485198  T
Q  128 acataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    || |||||| ||||||| |||| ||||| ||||||||||||| ||||||||||||||||    
T  18485197 acttagggggccaaaattgcaagttttttaaagttagaggggaaaaagtgcactttagc 18485139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 20214272 - 20214197
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||||||||||||||||||| |  | ||||| |||| ||||||||||||| ||||||||||||||||||||||    
T  20214272 caaaattgtagtttttgtacatagagtgctaaaattgcaagtttttgaaagtta-agggggaaaagtgcactttagc 20214197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 56 - 186
Target Start/End: Original strand, 5962542 - 5962670
Alignment:
Q  56 ggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaacttttt 155  Q
    |||||||||||||||||||||||||||||| |||   ||||||| |||   |   |||||| |||||||||||| ||||||||||||||  ||| |||||    
T  5962542 ggttaaaattggtcaaaaggaccaaagatgtaaattagctaaatattaggtggctaaaattatagtttttgtacttaggggaccaaaattacaaattttt 5962641  T
Q  156 gaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||   || || ||||||||||||||||    
T  5962642 gaaagt--cagtggaaaaagtgcactttagc 5962670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 92 - 186
Target Start/End: Original strand, 33160292 - 33160386
Alignment:
Q  92 ggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||  || ||||||||||||||| | ||| |||||| | ||||| |||| ||||||||| |||  |||||||||||||||||||||    
T  33160292 ggctaaatcttaaggggtcaaaattgtagtttctatacttagggggctaaaattgcaagtttttgaaaattaaggggggaaaagtgcactttagc 33160386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 20216787 - 20216861
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    ||||||||||||||||||| ||||||  | ||||| |||| ||||||||| |||  |||||||||||||||||||    
T  20216787 caaaattgtagtttttgtatatagggagctaaaattgcaagtttttgaaaattaaggggggaaaagtgcacttta 20216861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 25524151 - 25524228
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagtta-gagggggaaaagtgcactttagc 186  Q
    |||||||||||||||||||| |||||| |||||||  ||| ||||| ||| ||| | |||||||||||||||||||||    
T  25524151 caaaattgtagtttttgtacttagggggccaaaattacaaatttttaaaaattaggggggggaaaagtgcactttagc 25524228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 186
Target Start/End: Complemental strand, 33158176 - 33158099
Alignment:
Q  109 tcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||||||||||| |||||   |||||| |||| |||||||||||||| |||  |||| |||||||||||    
T  33158176 tcaaaattgtagtttttgtacttagggtgtcaaaattgcaagtttttgaaagttagggggaaaaaaatgcactttagc 33158099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 34893739 - 34893688
Alignment:
Q  113 aattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttag 164  Q
    |||||||||||||||||||||||  ||||||| |||| ||||||||||||||    
T  34893739 aattgtagtttttgtacatagggagccaaaattgcaagtttttgaaagttag 34893688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 40428696 - 40428642
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    ||||||||||||||||||||| ||||||||  ||| ||| |||||||||||||||    
T  40428696 ataggggaccaaaatcgcaacattttgaaacatagggggcgaaaagtgcacttta 40428642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 38834162 - 38834090
Alignment:
Q  111 aaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    |||||||||||||||||||||| ||| | |||||||||||||||| |||||||  |||  |||| |||||||||    
T  38834162 aaaattgtagtttttgtacataagggtc-aaaatcgcaactttttaaaagttaaggggaaaaaaatgcacttta 38834090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 2188962 - 2189029
Alignment:
Q  118 tagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||||||||| | |||||||||||||||||||| |||   | |||||||||| |||||||    
T  2188962 tagtttttgtacatagggg-ctaaaatcgcaactttttgaaacttaagagaggaaaagtgcgctttagc 2189029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 2373372 - 2373448
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||||  ||||| || ||||| | |||||||||||||||||||||| |||| ||  |||||||||| ||||||    
T  2373372 caaaattgtcctttttttaaataggaggccaaaatcgcaactttttgaaacttaggggttgaaaagtgcagtttagc 2373448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 186
Target Start/End: Complemental strand, 5730517 - 5730442
Alignment:
Q  112 aaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagtta-gagggggaaaagtgcactttagc 186  Q
    ||||||| ||||| |||| ||||   ||||||| |||| ||||||||||||| | |||||||||||||||||||||    
T  5730517 aaattgtggttttggtacttaggaagccaaaattgcaagtttttgaaagttaagggggggaaaagtgcactttagc 5730442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 99
Target Start/End: Complemental strand, 5730553 - 5730514
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaat 99  Q
    ||||||||||||||||||||||| ||||||| ||||||||    
T  5730553 aaaattggtcaaaaggaccaaagttgcaaaggggctaaat 5730514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 186
Target Start/End: Original strand, 41663770 - 41663825
Alignment:
Q  131 taggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||| |||||||||||||||||| ||| ||| |||| ||||| |||||||||||    
T  41663770 tagggggccaaaatcgcaactttttaaaacttaaagggtgaaaaatgcactttagc 41663825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 78 - 168
Target Start/End: Original strand, 1797289 - 1797379
Alignment:
Q  78 caaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagaggg 168  Q
    ||||| ||||||| ||||||||||||  ||| ||||||||||||||||||  ||| ||  ||||||| |||| ||||| ||| ||| ||||    
T  1797289 caaagttgcaaaggggctaaatcttaagggaccaaaattgtagtttttgtttataaggagccaaaattgcaagtttttaaaacttaaaggg 1797379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 2685820 - 2685749
Alignment:
Q  111 aaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    ||||||||||||||||||| ||||||||||||||   || ||||||||| ||  |||||||| |||||| ||||    
T  2685820 aaaattgtagtttttgtacttaggggaccaaaattataagtttttgaaaatt--agggggaatagtgcatttta 2685749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 26639286 - 26639340
Alignment:
Q  132 aggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||||||||| |||||||| |||||||  |||||||| | ||||||    
T  26639286 aggggaccaaaatcgcaacattttgaaacttagaggacgaaaagtgaagtttagc 26639340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 100
Target Start/End: Complemental strand, 2685913 - 2685872
Alignment:
Q  59 taaaattggtcaaaaggaccaaagatgcaaagaggctaaatc 100  Q
    |||||||| ||||||||||||||||||||||  |||||||||    
T  2685913 taaaattgatcaaaaggaccaaagatgcaaatgggctaaatc 2685872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 186
Target Start/End: Complemental strand, 18154630 - 18154495
Alignment:
Q  49 ttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgca 148  Q
    |||| |||||||||||||  ||||| || ||||  ||||| |  ||||||| ||| |||  |||||||||||||||||||| ||||||  |||||| | |    
T  18154630 ttgatttggttaaaattgagcaaaatgatcaaatttgcaatggagctaaattttagaggg-caaaattgtagtttttgtacttagggg-tcaaaattgta 18154533  T
Q  149 actttttgaaagttagagggggaaaagtgcactttagc 186  Q
    | |||||||||||||  |||  |||||| |||||||||    
T  18154532 agtttttgaaagttaaggggaaaaaagttcactttagc 18154495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 16039758 - 16039806
Alignment:
Q  131 taggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgca 179  Q
    |||||||||||||||||||||||| ||||| ||| |||  |||||||||    
T  16039758 taggggaccaaaatcgcaacttttggaaagatagggggctaaaagtgca 16039806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 18695249 - 18695305
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||||||||||  ||||||||  ||| ||| |||||||||||||||||    
T  18695249 atagggggccaaaatcgcaatattttgaaacatagggggcgaaaagtgcactttagc 18695305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 24025078 - 24025022
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||||||||||  |||||||| |||| ||| ||| |||||||||||||    
T  24025078 atagggggccaaaatcgcaatattttgaaacttagggggcgaatagtgcactttagc 24025022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 31576606 - 31576662
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||  ||||||||||||||||| ||| |||  ||| |||||||||||||||||    
T  31576606 atagggggacaaaatcgcaactttttaaaacttaaggggtgaaaagtgcactttagc 31576662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 40255696 - 40255772
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||||||||| ||||  ||||||  |||||| |||| ||||| ||| |||   ||||||||||||||||||||    
T  40255696 caaaattgtagtttctgtatttagggggtcaaaattgcaagtttttaaaaattaagaggggaaaagtgcactttagc 40255772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 6e-38; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 38 - 182
Target Start/End: Original strand, 1824030 - 1824174
Alignment:
Q  38 ccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagggga 137  Q
    ||||||| |||||||||  || |||||||  |||||||||||||||||||||  ||||||||||||  ||  |||||||||||||||||||| |||||||    
T  1824030 ccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagggggccaaaattgtagtttttgtacttagggga 1824129  T
Q  138 ccaaaatcgcaactttttgaaagttagagggggaaaagtgcactt 182  Q
    ||||||| |||| |||||||||||||||||||||||| |||||||    
T  1824130 ccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1824174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 38 - 182
Target Start/End: Original strand, 1858475 - 1858619
Alignment:
Q  38 ccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagggga 137  Q
    ||||||| |||||||||  || |||||||  |||||||||||||||||||||  ||||||||||||  ||  |||||||||||||||||||| |||||||    
T  1858475 ccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagggggccaaaattgtagtttttgtacttagggga 1858574  T
Q  138 ccaaaatcgcaactttttgaaagttagagggggaaaagtgcactt 182  Q
    ||||||| |||| |||||||||||||||||||||||| |||||||    
T  1858575 ccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1858619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 35 - 186
Target Start/End: Complemental strand, 10006496 - 10006345
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagg 134  Q
    |||||||||| |||||||||  || |||||||  |||||||||||||||||||||| ||||||||||||  ||  ||||||||| |||||  ||| ||||    
T  10006496 ctgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgttgttttgatacttagg 10006397  T
Q  135 ggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    || ||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  10006396 gggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagc 10006345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 35 - 186
Target Start/End: Original strand, 10007712 - 10007863
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagg 134  Q
    |||||||||| |||||||||  || |||||||   ||||||||||||||||||||| ||||||||||||  ||| ||||||||| |||| | ||| ||||    
T  10007712 ctgccacgtaggcgttgaataagtcaaaattgacgaaaaggaccaaagatgcaaaggggctaaatcttaggggaccaaaattgtggtttctatacttagg 10007811  T
Q  135 ggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    || ||||||| |||| |||||||||||||  |||||||||||||||||||||    
T  10007812 gggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagc 10007863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 22220515 - 22220389
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||| ||||||||||||||||||||||  ||||||||||||  ||  |||||||||||||||| ||||||||||  |||||| |||| | ||| |||    
T  22220515 aaaattgatcaaaaggaccaaagatgcaaatgggctaaatcttagggggccaaaattgtagtttttatacatagggggtcaaaattgcaagtattttaaa 22220416  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    |||||||||||||||||||||||||||    
T  22220415 gttagagggggaaaagtgcactttagc 22220389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 62 - 186
Target Start/End: Complemental strand, 30569011 - 30568888
Alignment:
Q  62 aattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagt 161  Q
    |||||| |||||||||||||||||||||| ||||||||||||  ||||||||||| |||||||||||| || | || |||||| | |||||||||||| |    
T  30569011 aattggccaaaaggaccaaagatgcaaaggggctaaatcttaggggatcaaaattatagtttttgtacctaagagatcaaaattgtaactttttgaaact 30568912  T
Q  162 tagagggggaaaagtgcactttagc 186  Q
    ||||||||| |||||||||||||||    
T  30568911 tagaggggg-aaagtgcactttagc 30568888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 49 - 184
Target Start/End: Original strand, 8389652 - 8389787
Alignment:
Q  49 ttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgca 148  Q
    |||| ||||| ||||||| |||||||||||||| ||| |||| || |||||||||  |||  |||||||||||||||||||||| ||||||||||| |||    
T  8389652 ttgacttggtcaaaattgttcaaaaggaccaaaaatgtaaaggggttaaatcttaggggactaaaattgtagtttttgtacataagggaccaaaattgca 8389751  T
Q  149 actttttgaaagttagagggggaaaagtgcacttta 184  Q
    ||||||||||| |||   ||||||||||||||||||    
T  8389752 actttttgaaacttaagaggggaaaagtgcacttta 8389787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 5514108 - 5513983
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||| ||||||||||||||||||||||| |||||||| |||  ||  |||||||||||||||||||| |||||| ||||||| | || |||||||||    
T  5514108 aaaattgatcaaaaggaccaaagatgcaaaggggctaaattttaggggggcaaaattgtagtttttgtacttagggggccaaaattggaagtttttgaaa 5514009  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    ||||| |||| ||||||||||||||||    
T  5514008 gttag-ggggtaaaagtgcactttagc 5513983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 8388603 - 8388465
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| | ||| |||||||| ||||||||||||| | |||||| ||||||||||||  ||  ||||||| ||||||||||||||||||| | |||||     
T  8388603 gcgttgattgggtcaaaattgggcaaaaggaccaaaaacgcaaaggggctaaatcttagggggccaaaattatagtttttgtacatagggggctaaaatt 8388504  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||||| ||||||  |||||| |||||||||||||||    
T  8388503 gcaactttttaaaagtt--aggggggaaagtgcactttagc 8388465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 46 - 182
Target Start/End: Original strand, 43661783 - 43661919
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| ||||| ||||||| |||||||||||||||||||||   ||| ||||||||  ||  ||||||| |||||||||||||||| |||  |||||     
T  43661783 gcgttgacttggtcaaaattgatcaaaaggaccaaagatgcaattgggcgaaatcttagggggccaaaattttagtttttgtacatagaggattaaaatt 43661882  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactt 182  Q
    ||||||||||||||||||  || ||||||||||||||    
T  43661883 gcaactttttgaaagttaagggtggaaaagtgcactt 43661919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 49 - 164
Target Start/End: Complemental strand, 2378998 - 2378883
Alignment:
Q  49 ttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgca 148  Q
    |||| ||||| ||||||| |||||||||||||||||||||| |||||| ||||||  || |||||||| | ||||||||| |||||||| |||||||| |    
T  2378998 ttgatttggtcaaaattgatcaaaaggaccaaagatgcaaataggctagatcttaaggggtcaaaattatggtttttgtatataggggatcaaaatcgta 2378899  T
Q  149 actttttgaaagttag 164  Q
    ||||||| ||||||||    
T  2378898 actttttaaaagttag 2378883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 22221338 - 22221464
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||||  ||||||| |||||||| |||| ||||||||||||  || ||||||||||||||||  ||| ||||||  |||||| |||| |||||||||    
T  22221338 aaaattggctaaaaggatcaaagatgtaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaa 22221437  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    ||||| || ||||||||||||||||||    
T  22221438 gttaggggtggaaaagtgcactttagc 22221464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 22227680 - 22227806
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||||  ||||||| |||||||| |||| ||||||||||||  || ||||||||||||||||  ||| ||||||  |||||| |||| |||||||||    
T  22227680 aaaattggctaaaaggatcaaagatgtaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaa 22227779  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    ||||| || ||||||||||||||||||    
T  22227780 gttaggggtggaaaagtgcactttagc 22227806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 24123009 - 24122884
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||||||  ||||||||||||||||||||||| |||||||||||  |||  |||||| |||||||||||| ||||||  |||||| |||| ||||| |||    
T  24123009 aaaattgaccaaaaggaccaaagatgcaaagaagctaaatcttaggggactaaaattatagtttttgtacttagggggtcaaaattgcaaattttttaaa 24122910  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    ||||| ||||||||| |||||||||||    
T  24122909 gttag-gggggaaaaatgcactttagc 24122884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 32968583 - 32968457
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||| ||||||||||  || |||||||| ||||||| | || |||  ||||||||| |||||  ||||| |||| ||||||||||||| ||||||||    
T  32968583 aaaattgctcaaaaggactgaaaatgcaaaggggctaaaacatagagggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaa 32968484  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    ||||| |||||||||||||||||||||    
T  32968483 gttagggggggaaaagtgcactttagc 32968457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 49 - 186
Target Start/End: Original strand, 30336464 - 30336601
Alignment:
Q  49 ttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgca 148  Q
    |||| ||||| |||||||  |||||||||||||||||||||  |||||||||||| ||| | ||||||||||||||||||| |||| | | |||||   |    
T  30336464 ttgacttggtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagagggttaaaattgtagtttttgtacttaggaggctaaaattata 30336563  T
Q  149 actttttgaaagttagagggggaaaagtgcactttagc 186  Q
    | |||||||||||||| |||| | ||||||||||||||    
T  30336564 agtttttgaaagttaggggggaagaagtgcactttagc 30336601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 36 - 185
Target Start/End: Complemental strand, 43661416 - 43661267
Alignment:
Q  36 tgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggg 135  Q
    |||||| || ||||||| ||||| ||| |||  |||||| ||||||||||||||| ||||||||||||  ||  ||||||| ||||||||||||||| ||    
T  43661416 tgccacatatgcgttgacttggtcaaagttgaccaaaagaaccaaagatgcaaaggggctaaatcttagggggccaaaattatagtttttgtacataagg 43661317  T
Q  136 gaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttag 185  Q
    ||||||||| | |||||||| ||| |||  ||  ||||||||||||||||    
T  43661316 gaccaaaattgtaacttttttaaaattaagggtagaaaagtgcactttag 43661267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 55 - 155
Target Start/End: Original strand, 18488231 - 18488331
Alignment:
Q  55 tggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttt 154  Q
    |||| |||| |||||||||||||||||||||||||| || || |||||| |||  ||||||||||||||||||| ||||||||| ||||| |||||||||    
T  18488231 tggtcaaaactggtcaaaaggaccaaagatgcaaaggggttatatcttagagggccaaaattgtagtttttgtatataggggactaaaattgcaactttt 18488330  T
Q  155 t 155  Q
    |    
T  18488331 t 18488331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 24359948 - 24359810
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| ||||| |||||||  ||||  ||| ||||||||||| |||||||||||||  || |||||||||||||||||||| |||| || | ||||||    
T  24359948 gcgttgatttggtcaaaattgaccaaagtgactaaagatgcaaataggctaaatcttagggggtcaaaattgtagtttttgtatatagagg-caaaaatc 24359850  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||||| ||||||||| ||| ||||| ||||||||||    
T  24359849 gcaactttttaaaagttaga-gggaaaaagagcactttagc 24359810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 30335780 - 30335640
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| ||||| |||||||  |||||||||||||||||||||| ||||||||||||  || | ||||||||| ||||||||| ||| |  |||||||     
T  30335780 gcgttgacttggtcaaaattgaacaaaaggaccaaagatgcaaaggggctaaatcttagggggttaaaattgtaatttttgtacttagcgagccaaaatt 30335681  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||| ||||| |||||||  || |||||| |||||||||||    
T  30335680 gcaagtttttaaaagttaagggtggaaaaatgcactttagc 30335640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 70 - 185
Target Start/End: Complemental strand, 29043515 - 29043400
Alignment:
Q  70 aaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggg 169  Q
    ||||||| ||||||| ||||| |||||||||||| |||   ||||||||||||||||||||||||||  ||||||||| |||||||||| ||||  || |    
T  29043515 aaaaggatcaaagatacaaaggggctaaatcttagagggaaaaaattgtagtttttgtacatagggggtcaaaatcgcgactttttgaaggttaagggag 29043416  T
Q  170 gaaaagtgcactttag 185  Q
    |||||||| |||||||    
T  29043415 gaaaagtgaactttag 29043400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 186
Target Start/End: Original strand, 32207308 - 32207423
Alignment:
Q  69 caaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagaggg 168  Q
    |||||||||||||||||||||||||||||||||||   |  |||||||||||||||||||| |||||   |||||| |||| |||||||| |||  ||||    
T  32207308 caaaaggaccaaagatgcaaagaggctaaatcttaagaggccaaaattgtagtttttgtacttagggcgtcaaaattgcaagtttttgaaggtt--aggg 32207405  T
Q  169 ggaaaagtgcactttagc 186  Q
    || |||||||||||||||    
T  32207406 gggaaagtgcactttagc 32207423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 30570225 - 30570353
Alignment:
Q  55 tggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttt 154  Q
    |||| |||||||| |||||||||||||||||||||  ||||||||||||  ||  ||||||| || ||||||||||||  ||| |||||| |||||||||    
T  30570225 tggtcaaaattggccaaaaggaccaaagatgcaaaagggctaaatcttagggggccaaaattctaatttttgtacata-aggatcaaaattgcaactttt 30570323  T
Q  155 tgaaagttagagggggaaaagtgcacttta 184  Q
    | ||| ||||||||| ||| ||||||||||    
T  30570324 taaaacttagaggggaaaaggtgcacttta 30570353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 60 - 184
Target Start/End: Original strand, 29968311 - 29968434
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||||||| ||||| ||  |||| ||||| | ||||||||||||  ||| || ||||||||||||||||| |||||| ||||||| |||| ||||| |||    
T  29968311 aaaattggccaaaatgattaaagttgcaatggggctaaatcttaggggaccagaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaa 29968410  T
Q  160 gttagagggggaaaagtgcacttta 184  Q
    |||| ||||||||||||||||||||    
T  29968411 gtta-agggggaaaagtgcacttta 29968434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 17844401 - 17844279
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||||||| ||||||||||||||||  ||||||| ||||| |||  ||| |||||||||||||||||||||||  ||||||||||| |||||||||||||    
T  17844401 aaaattggccaaaaggaccaaagatataaagaggttaaatgttag-ggaccaaaattgtagtttttgtacata--ggaccaaaatcacaactttttgaaa 17844305  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
     || | | ||| |||||||||||||||    
T  17844304 ctttg-gaggggaaagtgcactttagc 17844279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 46 - 184
Target Start/End: Complemental strand, 11282149 - 11282011
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| || || ||||||| |||||| || ||||  ||||||| || |||||||||  || ||||||||||  |||||||| ||||||| |||||||     
T  11282149 gcgttgactttgtcaaaattgatcaaaaagatcaaaattgcaaaggggttaaatcttagggggtcaaaattgtcatttttgtatatagggggccaaaatt 11282050  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    |||||||||| |||||||  |||| ||||||||||||||    
T  11282049 gcaactttttaaaagttaagggggaaaaagtgcacttta 11282011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 84 - 186
Target Start/End: Complemental strand, 12352024 - 12351922
Alignment:
Q  84 tgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttt 183  Q
    ||||| ||||||||||||||  || ||||||||||||||||||||| ||||||  |||||| |||| |||||||||||||  ||||| ||| ||||||||    
T  12352024 tgcaatgaggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaaatttttgaaagttaagggggggaaaatgcacttt 12351925  T
Q  184 agc 186  Q
    |||    
T  12351924 agc 12351922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 60 - 178
Target Start/End: Complemental strand, 18971037 - 18970920
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||||  ||||||||||||| ||||||| || ||||||||   || ||||||||||||||||||||| |||||| ||||||| | ||  ||||||||    
T  18971037 aaaattggcaaaaaggaccaaagttgcaaaggggttaaatcttcaggggtcaaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaa 18970938  T
Q  160 gttagagggggaaaagtgc 178  Q
    ||||| |||||||||||||    
T  18970937 gttag-gggggaaaagtgc 18970920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 60 - 178
Target Start/End: Complemental strand, 18978146 - 18978029
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||||  ||||||| ||||| ||||||| ||||||||||||  ||  |||||||||||||||||||| |||||| ||||||| | ||  ||||||||    
T  18978146 aaaattggaaaaaaggatcaaagttgcaaaggggctaaatcttaaggggccaaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaa 18978047  T
Q  160 gttagagggggaaaagtgc 178  Q
    ||||| |||||||||||||    
T  18978046 gttag-gggggaaaagtgc 18978029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 18979094 - 18979220
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||||  ||||||| ||||| ||||||  ||||||||| ||  ||  |||||||||||||||| ||  |||||| ||||||| |||| || ||||||    
T  18979094 aaaattggcaaaaaggatcaaagttgcaaatgggctaaatcataaggggccaaaattgtagtttttatatttagggggccaaaattgcaagttgttgaaa 18979193  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    ||||| |||||||||||||||||||||    
T  18979194 gttagggggggaaaagtgcactttagc 18979220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 32973910 - 32974036
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||||||  |||||||||  || |||||||| ||||||| | || |||  ||||||||| |||||  ||||| |||| ||||||||||||| ||||||||    
T  32973910 aaaattgtccaaaaggactgaaaatgcaaaggggctaaaacatagagggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaa 32974009  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    ||||| |||| ||||||||||||||||    
T  32974010 gttaggggggaaaaagtgcactttagc 32974036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 35 - 186
Target Start/End: Complemental strand, 1823705 - 1823553
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaaga-tgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatag 133  Q
    |||||||||| |||||||||   | |||||||| ||||||||||||| | ||||||  ||||||||||||  ||| | |||||||||||||||||| |||    
T  1823705 ctgccacgtaggcgttgaataaatcaaaattggccaaaaggaccaaaaaatgcaaatgggctaaatcttaggggaccgaaattgtagtttttgtacttag 1823606  T
Q  134 gggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
     ||  |||||| |||| ||||| |||||||  |||| |||||| |||||||||    
T  1823605 agggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactttagc 1823553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 35 - 186
Target Start/End: Complemental strand, 1858150 - 1857998
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaaga-tgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatag 133  Q
    |||||||||| |||||||||   | |||||||| ||||||||||||| | ||||||  ||||||||||||  ||| | |||||||||||||||||| |||    
T  1858150 ctgccacgtaggcgttgaataaatcaaaattggccaaaaggaccaaaaaatgcaaatgggctaaatcttaggggaccgaaattgtagtttttgtacttag 1858051  T
Q  134 gggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
     ||  |||||| |||| ||||| |||||||  |||| |||||| |||||||||    
T  1858050 agggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactttagc 1857998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 38974872 - 38974796
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||| |||||  ||||| |||| ||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  38974872 caaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagc 38974796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 38980068 - 38980144
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||| |||||  ||||| |||| ||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  38980068 caaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagc 38980144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 39005970 - 39005894
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||| |||||  ||||| |||| ||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  39005970 caaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagc 39005894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 39011165 - 39011241
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||| |||||  ||||| |||| ||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  39011165 caaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagc 39011241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 79 - 182
Target Start/End: Original strand, 45114510 - 45114612
Alignment:
Q  79 aaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgc 178  Q
    |||| ||||| |||| ||||||||| |||  |||||||||||||| ||||||||| | |||||||| |||| |||||||||||||| || ||||||||||    
T  45114510 aaagttgcaatgaggttaaatcttagaggc-caaaattgtagtttgtgtacatagtgaaccaaaattgcaagtttttgaaagttaggggcggaaaagtgc 45114608  T
Q  179 actt 182  Q
    ||||    
T  45114609 actt 45114612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 2379884 - 2380020
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| ||||| |||||||  |||||| ||||||||||||||   |||||||||||  ||  ||||||||||| ||| ||||||||||| |||||||     
T  2379884 gcgttgacttggtcaaaattgaccaaaagaaccaaagatgcaaatgagctaaatcttaaggggccaaaattgtag-tttcgtacatagggg-ccaaaatt 2379981  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
     ||||||||||||||||  ||||||||||||  ||||||||    
T  2379982 acaactttttgaaagtt--agggggaaaagtaaactttagc 2380020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 60 - 184
Target Start/End: Original strand, 40471121 - 40471244
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||||||  ||||| |||||||||| |||||||| |||||||||  ||   ||||||||||||||||||  || || |||||||| | || ||||| |||    
T  40471121 aaaattgaccaaaatgaccaaagatacaaagaggttaaatcttaaggggctaaaattgtagtttttgtatttatgg-accaaaattgtaagttttttaaa 40471219  T
Q  160 gttagagggggaaaagtgcacttta 184  Q
    |||| ||||||||||||||||||||    
T  40471220 gttaaagggggaaaagtgcacttta 40471244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 92 - 186
Target Start/End: Original strand, 12353367 - 12353459
Alignment:
Q  92 ggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||  ||  ||||||| ||||||| |||| |||||| ||||||| |||| ||||||||||||| ||||||||||||||||||||||    
T  12353367 ggctaaatcttagggggccaaaattatagtttt-gtacttagggggccaaaattgcaagtttttgaaagtta-agggggaaaagtgcactttagc 12353459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 92 - 184
Target Start/End: Original strand, 24361199 - 24361290
Alignment:
Q  92 ggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    |||||||||||| ||||| ||||||||| ||||||||||||| |||||||||||| || ||||| |||  || |||  |||||||||||||||    
T  24361199 ggctaaatcttaaaggattaaaattgtaatttttgtacatagaggaccaaaatcg-aaattttttaaaaataaaggaagaaaagtgcacttta 24361290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 84 - 186
Target Start/End: Original strand, 11283207 - 11283309
Alignment:
Q  84 tgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttt 183  Q
    ||||||| |||||||| |||  ||| |||||||||  ||||| |||||||||| | |||||  |||||||||||||||||  ||||| ||| ||||||||    
T  11283207 tgcaaaggggctaaattttaggggaccaaaattgtcatttttatacatagggggctaaaattacaactttttgaaagttaagggggggaaaatgcacttt 11283306  T
Q  184 agc 186  Q
    |||    
T  11283307 agc 11283309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 186
Target Start/End: Original strand, 42982680 - 42982757
Alignment:
Q  109 tcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||||||||||||||  | ||||| |||||||  ||||||||| ||| ||| ||| ||||||||||||||||||    
T  42982680 tcaaaattgtagtttttgtttacagggggccaaaattacaactttttaaaacttaaaggtggaaaagtgcactttagc 42982757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 163
Target Start/End: Original strand, 24123872 - 24123975
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatctta-taggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaa 158  Q
    |||||||  |||||||||||||||||||||| ||||||||||||  ||| | ||||||||| |||| |||| || | | ||||||| |||| ||||||||    
T  24123872 aaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttaggaggct-aaaattgtaattttagtacttaagaggccaaaattgcaagtttttgaa 24123970  T
Q  159 agtta 163  Q
    |||||    
T  24123971 agtta 24123975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 184
Target Start/End: Complemental strand, 11287853 - 11287779
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    |||||||||||||| ||||| ||| || ||||||| |||| ||||| |||||||| || | ||||||||||||||    
T  11287853 caaaattgtagtttctgtacttagtgggccaaaattgcaagttttttaaagttaggggtgaaaaagtgcacttta 11287779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 11456696 - 11456639
Alignment:
Q  129 cataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||| ||||||| |||| ||||||||| |||| ||| |||||||||||||||||    
T  11456696 catagggggccaaaattgcaaatttttgaaaattagggggagaaaagtgcactttagc 11456639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 130 - 179
Target Start/End: Complemental strand, 15869394 - 15869345
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgca 179  Q
    ||||||||||||||||||||| |||| ||| |||||||| ||||||||||    
T  15869394 ataggggaccaaaatcgcaacattttaaaatttagagggcgaaaagtgca 15869345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 36249610 - 36249553
Alignment:
Q  129 cataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||| | ||||||| |||||||||||||| |||  |||||||||||||||||||||    
T  36249610 cataggaggccaaaattgcaactttttgaaacttaaggggggaaaagtgcactttagc 36249553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 163
Target Start/End: Complemental strand, 40469473 - 40469364
Alignment:
Q  54 ttggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaacttt 153  Q
    ||||| ||||||| ||||||| ||||||||| ||||| | |||||||||||  | | ||||||||| ||||||||  ||| |||  |||||  ||| |||    
T  40469473 ttggtcaaaattgatcaaaagaaccaaagatacaaagggactaaatcttatgtggttaaaattgtaatttttgtatttagaggatgaaaattacaaattt 40469374  T
Q  154 ttgaaagtta 163  Q
    ||||||||||    
T  40469373 ttgaaagtta 40469364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 19392813 - 19392869
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||||||||||| |||||||| |||||||| |||||||| | ||||||    
T  19392813 atagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagc 19392869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 186
Target Start/End: Original strand, 1824186 - 1824221
Alignment:
Q  151 tttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||||||||| ||||||||||||||||    
T  1824186 tttttgaaagttagaggggaaaaagtgcactttagc 1824221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 186
Target Start/End: Original strand, 1858631 - 1858666
Alignment:
Q  151 tttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||||||||| ||||||||||||||||    
T  1858631 tttttgaaagttagaggggaaaaagtgcactttagc 1858666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 186
Target Start/End: Original strand, 5514260 - 5514369
Alignment:
Q  75 gaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaa 174  Q
    |||||||||||||||  |||||||| ||| ||| ||||||||||||||||||||  |||  | | ||||| |||| ||||| ||| |||| |||  ||||    
T  5514260 gaccaaagatgcaaatgggctaaattttagagg-tcaaaattgtagtttttgtatttagaaggctaaaattgcaagttttttaaaattag-gggataaaa 5514357  T
Q  175 gtgcactttagc 186  Q
    ||||||||||||    
T  5514358 gtgcactttagc 5514369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 11456759 - 11456696
Alignment:
Q  37 gccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatc 100  Q
    |||||||| |||||||||  || |||||||  |||||||||||||||||||| | |||||||||    
T  11456759 gccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaatggggctaaatc 11456696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 12723508 - 12723555
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtg 177  Q
    ||||||| ||||||||||||| |||||||| |||||||| ||||||||    
T  12723508 atagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtg 12723555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 186
Target Start/End: Complemental strand, 24483199 - 24483144
Alignment:
Q  131 taggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||| ||||||| |||| ||||||||| ||||  ||||||||||||||||||||    
T  24483199 tagggggccaaaattgcaagtttttgaaaattaggaggggaaaagtgcactttagc 24483144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 8802646 - 8802692
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagt 176  Q
    ||||||| ||||||||||||| |||||||| |||||||| |||||||    
T  8802646 atagggggccaaaatcgcaacattttgaaacttagagggcgaaaagt 8802692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 34625174 - 34625302
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgt--acataggggaccaaaatcgcaactttttga 157  Q
    |||||||  |||||||| ||||| ||| |||||| |||||| ||  ||   |||||||||||||||||  | ||| | ||| ||||| |||||||||| |    
T  34625174 aaaattgaccaaaaggatcaaagttgcgaagagggtaaatcatagggggctaaaattgtagtttttgttcatataagagactaaaattgcaactttttca 34625273  T
Q  158 aagttagagggggaaaagtgcactttagc 186  Q
    || ||||||||  |||||||||| |||||    
T  34625274 aacttagagggataaaagtgcaccttagc 34625302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 21930048 - 21930104
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||  |||||||||||| |||||||| |||||||| |||||||| | ||||||    
T  21930048 atagggggtcaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagc 21930104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 30539233 - 30539281
Alignment:
Q  115 ttgtagtttttgtacataggggaccaaaatcgcaactttttgaaagtta 163  Q
    ||||||||||| | | |||||||||||||||||||||||  ||||||||    
T  30539233 ttgtagttttttttcttaggggaccaaaatcgcaactttgggaaagtta 30539281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 30784519 - 30784567
Alignment:
Q  138 ccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||| |||||||| |||||||| |||||||| | ||||||    
T  30784519 ccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagc 30784567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 38630112 - 38630068
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaa 174  Q
    |||||||| |||||||||||| |||||||| |||||||| |||||    
T  38630112 ataggggatcaaaatcgcaacattttgaaacttagagggcgaaaa 38630068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 44147029 - 44146973
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||||||||||| |||||||| || ||||| |||||||| | ||||||    
T  44147029 atagggggccaaaatcgcaacattttgaaacttggagggcgaaaagtgaagtttagc 44146973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 1e-36; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 36 - 186
Target Start/End: Complemental strand, 22848342 - 22848192
Alignment:
Q  36 tgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggg 135  Q
    ||||||||| |||||||||  || ||||||| ||||||||||||||| ||||||| ||||||||||||  |   |||||||||||||||||||  |||||    
T  22848342 tgccacgtaggcgttgaataagtcaaaattgatcaaaaggaccaaagctgcaaaggggctaaatcttagggagccaaaattgtagtttttgtatttaggg 22848243  T
Q  136 gaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||| |||| |||||||||||||| |||| ||||||||||||||||    
T  22848242 gaccaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagc 22848192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 35 - 186
Target Start/End: Original strand, 18905937 - 18906087
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagg 134  Q
    |||||||||| |||||||||  || ||||||| |||||| |||||||||||||||   |||||||||||  || | ||||||||||||||||||| ||||    
T  18905937 ctgccacgtaggcgttgaataagtcaaaattgatcaaaaagaccaaagatgcaaatgagctaaatcttaggggct-aaaattgtagtttttgtacttagg 18906035  T
Q  135 ggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    || | ||||| |||| ||||||||||||||| ||||||||||||||||||||    
T  18906036 gggctaaaattgcaagtttttgaaagttagaaggggaaaagtgcactttagc 18906087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 55 - 164
Target Start/End: Complemental strand, 22587632 - 22587524
Alignment:
Q  55 tggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttt 154  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||  ||  ||||||||||||||||||| ||||||||||||||| | |||||||    
T  22587632 tggtcaaaattggccaaaaggaccaaagatgcaaagaggctaaatcttagggggccaaaattgtagtttttgta-ataggggaccaaaattggaactttt 22587534  T
Q  155 tgaaagttag 164  Q
    ||||||||||    
T  22587533 tgaaagttag 22587524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 61 - 186
Target Start/End: Original strand, 22587929 - 22588053
Alignment:
Q  61 aaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaag 160  Q
    ||||||| |||||||||||||||||||||| ||||||||||||  ||  ||||||||||||||||||||||||||| ||||||| |||| ||||||||||    
T  22587929 aaattggccaaaaggaccaaagatgcaaaggggctaaatcttaaggggccaaaattgtagtttttgtacatagggg-ccaaaattgcaagtttttgaaag 22588027  T
Q  161 ttagagggggaaaagtgcactttagc 186  Q
    |||   |||||||| |||||||||||    
T  22588028 ttatgaggggaaaaatgcactttagc 22588053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 57 - 186
Target Start/End: Complemental strand, 18904497 - 18904368
Alignment:
Q  57 gttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttg 156  Q
    ||||||||||| ||||||||||||||||| |||| |||||| |||||  | | |||||||||||||||||||| || ||| ||||||| |||  ||||||    
T  18904497 gttaaaattggccaaaaggaccaaagatgtaaaggggctaattcttagggaaccaaaattgtagtttttgtacttaaggggccaaaattgcacgtttttg 18904398  T
Q  157 aaagttagagggggaaaagtgcactttagc 186  Q
    |||||||  |||||||||||||||||||||    
T  18904397 aaagttaaggggggaaaagtgcactttagc 18904368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 71 - 186
Target Start/End: Original strand, 802576 - 802690
Alignment:
Q  71 aaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagaggggg 170  Q
    ||||||||||| |||||||| ||  |||||||| ||| |||||||||||||||||||||| ||||| ||||||| |||| ||||||||| |||| |||||    
T  802576 aaaggaccaaatatgcaaaggggtaaaatcttagagggtcaaaattgtagtttttgtacacagggggccaaaattgcaagtttttgaaacttag-ggggg 802674  T
Q  171 aaaagtgcactttagc 186  Q
    |||||| |||||||||    
T  802675 aaaagtacactttagc 802690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 36449905 - 36449779
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||||||||||||| ||||  ||||||| | |||| ||||   ||  |||||||||||||||||||| |||||| ||||||| |||| |||||||||    
T  36449905 aaaattggtcaaaaggatcaaaattgcaaagggcctaattcttgggggggcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaa 36449806  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    ||||  |||||||||||||||||||||    
T  36449805 gttaaggggggaaaagtgcactttagc 36449779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 155
Target Start/End: Complemental strand, 11996848 - 11996739
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| ||||| |||||||  ||||||||||||||||| |||| || ||||||||| || |  ||||||||||||||||||||||||||  |||||||    
T  11996848 gcgttgacttggtcaaaattgaccaaaaggaccaaagatgtaaaggggttaaatcttagagaactaaaattgtagtttttgtacatagggggtcaaaatc 11996749  T
Q  146 gcaacttttt 155  Q
    ||||||||||    
T  11996748 gcaacttttt 11996739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 11258771 - 11258911
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| | ||| |||||||  |||||||| ||||  ||||| | ||||||||||||  |||  ||||||||||||||||||| |||||| |||||||     
T  11258771 gcgttgactaggtcaaaattgaccaaaaggatcaaatctgcaatggggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaatt 11258870  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||| |||||||||||||||| ||| ||| |||||||||||    
T  11258871 gcaagtttttgaaagttagagaggggaaaatgcactttagc 11258911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 18797374 - 18797247
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||||  ||||||||||||||||||||| |||||||| |||  || ||||||||||||||||  ||| || |||  |||||| |||| |||||||||    
T  18797374 aaaattggctaaaaggaccaaagatgcaaaggggctaaattttagggggtcaaaattgtagttttaatacttaaggggtcaaaattgcaagtttttgaaa 18797275  T
Q  160 gttagaggg-ggaaaagtgcactttagc 186  Q
    ||||| ||| ||||||||||||||||||    
T  18797274 gttagggggtggaaaagtgcactttagc 18797247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 36 - 186
Target Start/End: Original strand, 26545471 - 26545621
Alignment:
Q  36 tgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggg 135  Q
    |||||| || ||||||| ||||| ||||||| |||||| |||||||||||||||| |||||||||||| ||| |||||||| || ||||||||  || ||    
T  26545471 tgccacatatgcgttgatttggtcaaaattgatcaaaatgaccaaagatgcaaaggggctaaatcttagagggtcaaaattataatttttgtatttaagg 26545570  T
Q  136 gaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |  |||||| |||| ||||||||||| |    || ||||||||||||||||    
T  26545571 ggtcaaaattgcaaatttttgaaagtcatgaaggaaaaagtgcactttagc 26545621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 18300699 - 18300822
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttatagga-tcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaa 158  Q
    |||||||  |||||||||||||||||||||| ||||||||  ||||||  ||||||||||||||||||||| ||||||  |||||| |||| ||| ||||    
T  18300699 aaaattgtccaaaaggaccaaagatgcaaaggggctaaat--tataggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttatgaa 18300796  T
Q  159 agttagagggggaaaagtgcactttagc 186  Q
    ||||  ||||||||||||||| ||||||    
T  18300797 agtt--agggggaaaagtgcaatttagc 18300822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 35 - 186
Target Start/End: Complemental strand, 13030441 - 13030293
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagg 134  Q
    |||||||||| |||||||||  || |||||||  ||||| |||||||||||||||   |||||||||||  ||   ||||||||| ||||||||| ||||    
T  13030441 ctgccacgtaggcgttgaataagtcaaaattgaccaaaatgaccaaagatgcaaaagagctaaatcttagggggcaaaaattgtaatttttgtacttagg 13030342  T
Q  135 ggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    || |||||||  ||| ||||||||||||  ||||||||||||||||||||||    
T  13030341 gg-ccaaaattacaagtttttgaaagtt--agggggaaaagtgcactttagc 13030293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 60 - 159
Target Start/End: Original strand, 810755 - 810854
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||| || ||||||||||| |||||||| ||  |||||||| ||| |||||||||||||||||||||| ||||| ||||||| |||| |||||||||    
T  810755 aaaattgatctaaaggaccaaatatgcaaaggggtaaaatcttagagggtcaaaattgtagtttttgtacacagggggccaaaattgcaagtttttgaaa 810854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 7899907 - 7899982
Alignment:
Q  111 aaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||| ||||| |||||||||||||| |||| |||||||||||||  |||||||||||||||||||||    
T  7899907 aaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagc 7899982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 38840467 - 38840593
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||| |||||||||  |||  ||||| | ||||||||||||  ||   ||||||||||||||||||| |||||| | ||||| |||| |||||||||    
T  38840467 aaaattgatcaaaaggattaaaattgcaatggggctaaatcttagggggctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaa 38840566  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    ||||  |||||||||||||||||||||    
T  38840567 gttaaggggggaaaagtgcactttagc 38840593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 49 - 186
Target Start/End: Complemental strand, 18299511 - 18299374
Alignment:
Q  49 ttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgca 148  Q
    |||| ||||| |||||||  |||||||| ||||||||||||  ||||||||| ||  ||  |||||||||||||||| ||| |||| | ||||||| | |    
T  18299511 ttgacttggtcaaaattgaccaaaaggatcaaagatgcaaaagggctaaatcatagggggccaaaattgtagtttttatacttaggtggccaaaattgaa 18299412  T
Q  149 actttttgaaagttagagggggaaaagtgcactttagc 186  Q
    | |||||||||||||  || ||||||||||||||||||    
T  18299411 agtttttgaaagttacgggtggaaaagtgcactttagc 18299374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 112 - 184
Target Start/End: Original strand, 36450947 - 36451018
Alignment:
Q  112 aaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    |||||||||||| ||||| |||||||||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  36450947 aaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagtta-agggggaaaagtgcacttta 36451018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 1034444 - 1034569
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||| |||||||||||||||||| |||||   ||||||||||||  ||  | ||||||| ||||| |||| |||||| ||||||| |||  |||||||||    
T  1034444 aaaagtggtcaaaaggaccaaagttgcaatt-ggctaaatcttaggggggctaaattgtggttttggtacgtagggggccaaaattgcatgtttttgaaa 1034542  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    ||||  |||||||||||||||||||||    
T  1034543 gttaaggggggaaaagtgcactttagc 1034569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 13568053 - 13567975
Alignment:
Q  106 ggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    |||||||||||||||||||||||  |||||| ||||||| |||| ||||||||| ||||| |||||||||| |||||||    
T  13568053 ggatcaaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaacttagaaggggaaaagtacacttta 13567975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 35 - 167
Target Start/End: Original strand, 18869111 - 18869245
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgc-aaagaggctaaatcttataggatcaaaattgtagtttttgtacatag 133  Q
    ||||||| || |||||||||  || ||||||| |||||| |||||||||||| |||  ||||||||||||  |||| ||||||||||||||||||| |||    
T  18869111 ctgccacataggcgttgaataagtcaaaattgatcaaaaagaccaaagatgcaaaatgggctaaatcttaggggataaaaattgtagtttttgtacttag 18869210  T
Q  134 gggaccaaaatcg-caactttttgaaagttagagg 167  Q
      | ||||||| | ||| |||||||||||||||||    
T  18869211 aaggccaaaattgccaaatttttgaaagttagagg 18869245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 186
Target Start/End: Original strand, 23869518 - 23869634
Alignment:
Q  69 caaaaggaccaaagatgcaaagaggctaaatcttataggatc-aaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagg 167  Q
    |||||||| ||||||||||||| ||||||||||||  ||| | ||||||||||||||||||  |||||| ||||||| |||| ||||| |||||||  ||    
T  23869518 caaaaggatcaaagatgcaaaggggctaaatcttag-ggagctaaaattgtagtttttgtatttagggggccaaaattgcaagttttt-aaagttaaggg 23869615  T
Q  168 gggaaaagtgcactttagc 186  Q
     ||||||||||||||||||    
T  23869616 tggaaaagtgcactttagc 23869634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 18869005 - 18868925
Alignment:
Q  106 ggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||||||||||||||||||  |||| | ||||||| |||| |||||||||||||| || |||||||| |||||||||    
T  18869005 ggatcaaaattgtagtttttgtatttaggaggccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagc 18868925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 11938823 - 11938888
Alignment:
Q  121 tttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||| |||| ||||||||| |||| |||||||||||||| || ||||||||||||||||||    
T  11938823 tttttgtacttaggagaccaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagc 11938888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 184
Target Start/End: Complemental strand, 26544299 - 26544152
Alignment:
Q  36 tgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatctta-taggatcaaaattgtagtttttgtacatagg 134  Q
    |||||| || ||||||| ||||| ||||||| |||||||||||||| ||||||||  |||||||||||  ||| | |||| |||||||||||||| || |    
T  26544299 tgccacatatgcgttgacttggtcaaaattgatcaaaaggaccaaatatgcaaaggtgctaaatcttaggaggct-aaaactgtagtttttgtactta-g 26544202  T
Q  135 ggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    | |||||||| | || ||||| ||| |||| ||  |||||||||||||||    
T  26544201 gaaccaaaattgtaaatttttaaaaattaggggtagaaaagtgcacttta 26544152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 164
Target Start/End: Complemental strand, 28618073 - 28617945
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagg 134  Q
    |||||||||| || ||||||| || ||||| |  |||||  ||||||||||||||| ||||||||||||  ||  |||||||| ||||||||||| | ||    
T  28618073 ctgccacgtaggcattgaattagtcaaaatagaccaaaataaccaaagatgcaaaggggctaaatctta-gggggcaaaattgaagtttttgtacttggg 28617975  T
Q  135 ggaccaaaatcgcaactttttgaaagttag 164  Q
    || ||||||| ||||  |||||||||||||    
T  28617974 gggccaaaattgcaagattttgaaagttag 28617945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 106 - 178
Target Start/End: Original strand, 5819733 - 5819804
Alignment:
Q  106 ggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgc 178  Q
    ||||||| |||||||||||||| |||| ||| |||||||||||||||||||||| ||| |||||| |||||||    
T  5819733 ggatcaagattgtagtttttgttcatatggggccaaaatcgcaactttttgaaactta-aggggggaaagtgc 5819804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 11257748 - 11257623
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||| ||||||||| ||||  ||||| | ||||||||||||   |  |||||||||||||||| ||| |||||    ||||| |||| |||||||||    
T  11257748 aaaattgatcaaaaggatcaaatttgcaatggggctaaatcttaggaggccaaaattgtagtttttatacttagggttt-aaaattgcaagtttttgaaa 11257650  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    |||||||| | ||||||||||||||||    
T  11257649 gttagaggagtaaaagtgcactttagc 11257623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 32739700 - 32739646
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttag 164  Q
    ||||||||||||||||||||||| ||| ||||||| |||| ||||||||||||||    
T  32739700 caaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaagttag 32739646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 7898823 - 7898694
Alignment:
Q  55 tggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttt 154  Q
    |||| ||||||| |||||||||  |||  ||||| | ||||||||||||  ||  |||||||||||||| | ||| |||| | | ||||| |||| ||||    
T  7898823 tggtcaaaattgatcaaaaggattaaaattgcaatggggctaaatcttagggggccaaaattgtagtttctatacttaggaggcaaaaattgcaagtttt 7898724  T
Q  155 tgaaagttagagggggaaaagtgcacttta 184  Q
    |||||||||  ||| |||||||||||||||    
T  7898723 tgaaagttaaggggagaaaagtgcacttta 7898694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 15735121 - 15735065
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||||||||||| |||||||| |||||||| |||||||| | ||||||    
T  15735121 ataggggaccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagc 15735065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 92 - 186
Target Start/End: Complemental strand, 41878189 - 41878093
Alignment:
Q  92 ggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgca---actttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||  ||  |||||||||||||| ||||| |||||| ||||||| |||   | ||||||||||||| |||||| |||||||||||||||    
T  41878189 ggctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattgcaaatagtttttgaaagtta-aggggggaaagtgcactttagc 41878093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 41879237 - 41879312
Alignment:
Q  111 aaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||| ||||| |||||| ||||||| |||| ||||||||| |||  |||| ||||||| ||||||||    
T  41879237 aaaattgtagtttatgtacttagggggccaaaattgcaagtttttgaaaattaagggggaaaaagtgtactttagc 41879312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 13570531 - 13570657
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||||  ||||||| ||||| || |||| | |||| ||||   ||| ||||||| |||||||||||| || ||||| ||||| |||| |||||||||    
T  13570531 aaaattggcaaaaaggatcaaagttgtaaagggactaattcttgggggaccaaaattatagtttttgtacttaagggactaaaattgcaagtttttgaaa 13570630  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    ||||  ||  ||||| |||||||||||    
T  13570631 gttatgggtagaaaaatgcactttagc 13570657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 186
Target Start/End: Original strand, 24476867 - 24476942
Alignment:
Q  109 tcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||||||||||| ||||||||||||||  ||| ||||| ||||||   |||| ||||||||||| ||||    
T  24476867 tcaaaattgtagtttttgtacttaggggaccaaaattacaagtttttaaaagtt--gggggaaaaagtgcactctagc 24476942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 186
Target Start/End: Complemental strand, 38839337 - 38839243
Alignment:
Q  92 ggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||  ||  |||||||||||||||||||  |||||| | ||||| |||| ||||||||| |||  |||| |||| |||||||||||    
T  38839337 ggctaaatcttagggggccaaaattgtagtttttgtagttagggggctaaaattgcaagtttttgaaaattaagggggaaaaaatgcactttagc 38839243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 186
Target Start/End: Complemental strand, 1033330 - 1033212
Alignment:
Q  66 ggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttaga 165  Q
    |||||||| |||||||| ||||| | |||||||||||| |||    ||||| || |||| |||  |||||| ||||||| |||| ||||| ||||||||     
T  1033330 ggtcaaaatgaccaaagttgcaatggggctaaatcttagaggggttaaattataattttggtatttagggg-ccaaaattgcaagtttttaaaagttag- 1033233  T
Q  166 gggggaaaagtgcactttagc 186  Q
    ||||||||||| |||||||||    
T  1033232 gggggaaaagtacactttagc 1033212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 1091798 - 1091738
Alignment:
Q  84 tgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaat 144  Q
    |||||| |||||||||||||  || |||||||||||| |||| ||||||| ||||||||||    
T  1091798 tgcaaataggctaaatcttaaggggtcaaaattgtagcttttatacatagaggaccaaaat 1091738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 2986933 - 2986989
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||||||||||| ||||||||  ||||| | |||||||||||||||||    
T  2986933 atagggggccaaaatcgcaacattttgaaacatagagagtgaaaagtgcactttagc 2986989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 6763964 - 6764008
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaa 174  Q
    ||||||||||||||||||||| |||||||| |||||||| |||||    
T  6763964 ataggggaccaaaatcgcaacattttgaaacttagagggcgaaaa 6764008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 11175964 - 11175908
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||||||||||| |||||||| |||||||| |||||||| | ||||||    
T  11175964 atagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagc 11175908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 18538075 - 18538131
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||||||||||| |||||||| |||||||| |||||||| | ||||||    
T  18538075 atagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagc 18538131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 21837191 - 21837127
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaat 99  Q
    |||||| ||| |||||||||  || ||||||| |||||| |||||||||||||||| ||||||||    
T  21837191 ctgccatgtaggcgttgaataagtcaaaattgatcaaaatgaccaaagatgcaaaggggctaaat 21837127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 13830324 - 13830270
Alignment:
Q  129 cataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    ||||||||  ||||||||||||||||| ||| |||| |||||||||||||||||||    
T  13830324 catagggggtcaaaatcgcaactttttcaaacttag-gggggaaaagtgcacttta 13830270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 1093144 - 1093234
Alignment:
Q  84 tgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaa 174  Q
    ||||||| ||||||||||||  || | ||||||||| |||||||| |||||| | || ||| ||||| |||| |||||||  |||||||||    
T  1093144 tgcaaaggggctaaatcttagcgggttaaaattgtaatttttgtatatagggaatcacaattgcaacattttaaaagttaaggggggaaaa 1093234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 168
Target Start/End: Original strand, 44617998 - 44618032
Alignment:
Q  134 gggaccaaaatcgcaactttttgaaagttagaggg 168  Q
    ||||||||||||||||||| |||||||||||||||    
T  44617998 gggaccaaaatcgcaacttcttgaaagttagaggg 44618032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 155
Target Start/End: Complemental strand, 1410117 - 1410032
Alignment:
Q  70 aaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaacttttt 155  Q
    |||||||  |||| |||||| |||||||||||||  ||| |||||||||  ||||||| || ||||| ||||| || |||||||||    
T  1410117 aaaaggattaaagttgcaaataggctaaatcttaggggaccaaaattgtcatttttgttcacagggggccaaactcacaacttttt 1410032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 15700993 - 15701049
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||| |||||||||||| || |||||  ||| ||| |||||||||||||||||    
T  15700993 ataggggatcaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagc 15701049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 186
Target Start/End: Original strand, 21837300 - 21837353
Alignment:
Q  131 taggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||| ||||||| |||| ||||||||||||  ||||| ||||||||||||||||    
T  21837300 tagggggccaaaattgcaagtttttgaaagtt--aggggaaaaagtgcactttagc 21837353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 30714332 - 30714276
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||||||||||| |||| |||  ||| ||| |||||||||||||||||    
T  30714332 atagggggccaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagc 30714276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 128
Target Start/End: Complemental strand, 32739778 - 32739710
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgta 128  Q
    |||||||| |||| |||||||||||| |||  | ||||||||||  ||  |||||||||||||||||||    
T  32739778 aaaattggccaaatggaccaaagatggaaaatgactaaatcttaaggggccaaaattgtagtttttgta 32739710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 43029036 - 43029084
Alignment:
Q  115 ttgtagtttttgtacataggggaccaaaatcgcaactttttgaaagtta 163  Q
    ||||||||||| | | |||||| |||||||||||||||| |||||||||    
T  43029036 ttgtagttttttttcttagggggccaaaatcgcaactttgtgaaagtta 43029084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 6e-35; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 35 - 186
Target Start/End: Complemental strand, 7315031 - 7314881
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagg 134  Q
    |||||||||| |||||||||  || |||||||  ||||| |||||||||||||||| ||||||||||||  || |||||||||| |||||  ||| ||||    
T  7315031 ctgccacgtaggcgttgaataagtcaaaattgaccaaaatgaccaaagatgcaaaggggctaaatcttagggggtcaaaattgttgttttgatacttagg 7314932  T
Q  135 ggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    || ||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  7314931 gg-ccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagc 7314881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 49 - 186
Target Start/End: Original strand, 6842246 - 6842383
Alignment:
Q  49 ttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatc-aaaattgtagtttttgtacataggggaccaaaatcgc 147  Q
    |||| ||||| |||||||| |||||||| |||||||||||| || |||||| ||| |||| | |||||||||||||||| ||||||||| ||||||| ||    
T  6842246 ttgacttggtcaaaattggccaaaaggatcaaagatgcaaacagactaaatttta-aggaactaaaattgtagtttttgcacatagggggccaaaattgc 6842344  T
Q  148 aactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  6842345 aactttttgaaacttagagggggaaaagtgcactttagc 6842383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 8659406 - 8659266
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| | ||| ||||||||||||||||||||||| ||||| | ||||||||||||  ||  | ||||||| ||||| |||| |||||| |||||||     
T  8659406 gcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaatt 8659307  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  8659306 gcaagtttttgaaagttagagggggaaaagtgcactttagc 8659266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 70 - 186
Target Start/End: Original strand, 3333010 - 3333126
Alignment:
Q  70 aaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggg 169  Q
    ||||||| ||||| ||||||| |||||||| ||| ||| | |||||||||||||||||||||||||| |||||||||||||||||| ||| ||||| |||    
T  3333010 aaaaggatcaaagttgcaaaggggctaaattttagagggttaaaattgtagtttttgtacatagggggccaaaatcgcaactttttcaaacttagaaggg 3333109  T
Q  170 gaaaagtgcactttagc 186  Q
    |||||||||| ||||||    
T  3333110 gaaaagtgcaatttagc 3333126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 3721753 - 3721613
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| | ||| ||||||||||||||||||||||| ||||| | ||||||||||||  || || ||||| | ||||| |||| ||||||  ||||||     
T  3721753 gcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaaggggtctaaattatggttttggtacttagggggtcaaaatt 3721654  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  3721653 gcaagtttttgaaagttagagggggaaaagtgcactttagc 3721613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 70 - 186
Target Start/End: Original strand, 16704481 - 16704597
Alignment:
Q  70 aaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggg 169  Q
    ||||||| || || |||||||||||||||||||| ||||||||||||||||||||||||| ||||||  |||||| |||| |||||||||||||  || |    
T  16704481 aaaaggatcatagttgcaaagaggctaaatcttaaaggatcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggag 16704580  T
Q  170 gaaaagtgcactttagc 186  Q
    |||||||||||||||||    
T  16704581 gaaaagtgcactttagc 16704597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 27437969 - 27437829
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| ||||| |||||||| |||||||||||||| |||||||  |||||||||||  || ||||||||||||||||| |  ||||||| |||||||     
T  27437969 gcgttgatttggtcaaaattggccaaaaggaccaaagttgcaaaggagctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaatt 27437870  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||||| |||||||  ||| |||||||||||||||||    
T  27437869 gcaacttttttaaagttaaggggagaaaagtgcactttagc 27437829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 64 - 186
Target Start/End: Complemental strand, 8821996 - 8821874
Alignment:
Q  64 ttggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagtta 163  Q
    ||||||||||||||||||| ||||| |  |||||||||||  ||  | ||||||| ||||| |||| |||||| ||||||| |||| |||||||||||||    
T  8821996 ttggtcaaaaggaccaaagttgcaatggagctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagtta 8821897  T
Q  164 gagggggaaaagtgcactttagc 186  Q
    |||||||||||||||||||||||    
T  8821896 gagggggaaaagtgcactttagc 8821874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 57 - 182
Target Start/End: Complemental strand, 6840322 - 6840199
Alignment:
Q  57 gttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttg 156  Q
    |||||||||||||||||||| ||||||||||||| |  ||||||||| ||| |||||||| |||||||||||  || ||| |||||||||||||||||||    
T  6840322 gttaaaattggtcaaaaggatcaaagatgcaaagggattaaatcttagagggtcaaaattatagtttttgtatttaaggggccaaaatcgcaactttttg 6840223  T
Q  157 aaagttagagggggaaaagtgcactt 182  Q
    ||| ||| |||||| |||||||||||    
T  6840222 aaactta-aggggg-aaagtgcactt 6840199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 36 - 186
Target Start/End: Original strand, 7316244 - 7316394
Alignment:
Q  36 tgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggg 135  Q
    ||||||||| |||||||||  || |||||||  ||||||||||| |||||||||| ||||||||||||  ||  ||||||||| ||||   ||  |||||    
T  7316244 tgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccatagatgcaaaggggctaaatcttaaggggccaaaattgtggtttcaatatttaggg 7316343  T
Q  136 gaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    | ||||||| |||| |||||||||||||  |||||||||||||||||||||    
T  7316344 ggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagc 7316394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 54 - 184
Target Start/End: Complemental strand, 5658889 - 5658759
Alignment:
Q  54 ttggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaacttt 153  Q
    ||||| |||||||  |||||||| ||||| ||||||  ||||||||||||  |||||||||||||||||||||||||||||| || |||||   ||||||    
T  5658889 ttggtcaaaattgaccaaaaggatcaaagttgcaaatgggctaaatcttaagggatcaaaattgtagtttttgtacatagggaactaaaattataacttt 5658790  T
Q  154 ttgaaagttagagggggaaaagtgcacttta 184  Q
    || ||| |||  ||||||||| |||||||||    
T  5658789 ttaaaacttaaggggggaaaaatgcacttta 5658759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 46 - 184
Target Start/End: Original strand, 34834539 - 34834677
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| | ||| ||||||||||||||||||||||| ||||| | ||||||||||||  ||  | ||||||| |||||  ||| |||| || ||||||     
T  34834539 gcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttgatacttaggagatcaaaatt 34834638  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    |||| |||||||||||||| | |||||||||||||||||    
T  34834639 gcaagtttttgaaagttagggagggaaaagtgcacttta 34834677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 60 - 184
Target Start/End: Original strand, 1829577 - 1829701
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||||||  ||||| |||||||||||||||| ||||||||||||  ||  |||||||||||||||| ||| ||||||  |||||| |||| ||||| |||    
T  1829577 aaaattgaccaaaatgaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaa 1829676  T
Q  160 gttagagggggaaaagtgcacttta 184  Q
    ||||| |||  ||||||||||||||    
T  1829677 gttagggggaaaaaagtgcacttta 1829701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 8660164 - 8660303
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| ||||| ||||||||||||||||| ||||| ||||| |  |||||||||||  ||  | ||||||| ||||| |||| |||||| | |||||     
T  8660164 gcgttgacttggtcaaaattggtcaaaaggatcaaagttgcaatggagctaaatcttaggggggctaaattgtggttttggtacttaggggtc-aaaatt 8660262  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||| ||||||||||||||  ||||||||||||||||||||    
T  8660263 gcaagtttttgaaagttaggaggggaaaagtgcactttagc 8660303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 66 - 186
Target Start/End: Original strand, 8822773 - 8822893
Alignment:
Q  66 ggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttaga 165  Q
    ||||||||||||||||| |||||   ||||||||||||  ||  | ||||||| ||||| |||| ||||||  |||||| |||| ||||||||||||| |    
T  8822773 ggtcaaaaggaccaaagttgcaattgggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttaaa 8822872  T
Q  166 gggggaaaagtgcactttagc 186  Q
    | |||||||||||||||||||    
T  8822873 gagggaaaagtgcactttagc 8822893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 78 - 186
Target Start/End: Complemental strand, 26574727 - 26574620
Alignment:
Q  78 caaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtg 177  Q
    ||||| ||||||| ||||||||||||  |||||||||| ||||||||||||| ||| ||  |||||| |||| ||||||||||||||||| || ||| ||    
T  26574727 caaagttgcaaaggggctaaatcttaagggatcaaaat-gtagtttttgtacttagaggttcaaaattgcaagtttttgaaagttagaggtgggaaattg 26574629  T
Q  178 cactttagc 186  Q
    |||||||||    
T  26574628 cactttagc 26574620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 60 - 174
Target Start/End: Original strand, 10785887 - 10786000
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||||| ||||||| ||||| ||||||| ||||||||||||  || | ||||||||||||||||||| ||||||   ||||| |||| ||||| |||    
T  10785887 aaaattggtaaaaaggatcaaagttgcaaaggggctaaatcttaaggggttaaaattgtagtttttgtacttagggggttaaaattgcaaatttttaaaa 10785986  T
Q  160 gttagagggggaaaa 174  Q
    ||||| |||||||||    
T  10785987 gttag-gggggaaaa 10786000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 30495722 - 30495796
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||||  |||||||||||||||||  |||||||||||||||||||||||  ||||| ||||||||||||||||    
T  30495722 caaaattgttatttttgtacataggggattaaaatcgcaactttttgaaagtt--aggggaaaaagtgcactttagc 30495796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 70 - 186
Target Start/End: Original strand, 12382695 - 12382811
Alignment:
Q  70 aaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggg 169  Q
    ||||||||||||||||||||  || ||||||||   ||||||||||| |||||||  ||| ||||||  ||||||  ||| ||||| ||| ||||||| |    
T  12382695 aaaaggaccaaagatgcaaaagggttaaatctttggggatcaaaattatagttttaatacttagggggtcaaaattacaaatttttaaaaattagaggtg 12382794  T
Q  170 gaaaagtgcactttagc 186  Q
    |||||||||||||||||    
T  12382795 gaaaagtgcactttagc 12382811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 17496939 - 17496794
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatctta-taggatcaaaattgtagtttttgtacataggggaccaaaat 144  Q
    |||||||||  || ||||||| |||||||||||||||||||||||||| |||||||||   ||  |||||||| ||||||||||| ||| ||   |||||    
T  17496939 gcgttgaataagtcaaaattgatcaaaaggaccaaagatgcaaagaggttaaatcttaggggggccaaaattgcagtttttgtacttagagggttaaaat 17496840  T
Q  145 cgcaactttttgaaagtta----gagggggaaaagtgcactttagc 186  Q
     | || |||||||||||||    ||||||||||| |||||||||||    
T  17496839 tgtaagtttttgaaagttagggggagggggaaaaatgcactttagc 17496794  T

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Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 3333499 - 3333627
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgt--acataggggaccaaaatcgcaactttttga 157  Q
    |||||||| |||||||| ||||| ||| ||| ||||||||| || ||| | |||||||||||||||||  | ||| | ||| |||||||||||||||| |    
T  3333499 aaaattggccaaaaggatcaaagttgcgaaggggctaaatcatagagggttaaaattgtagtttttgttcatataagagactaaaatcgcaactttttca 3333598  T
Q  158 aagttagagggggaaaagtgcactttagc 186  Q
    || ||| ||||  |||| |||||||||||    
T  3333599 aacttaaagggataaaaatgcactttagc 3333627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 70 - 186
Target Start/End: Complemental strand, 10784710 - 10784593
Alignment:
Q  70 aaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagtt-agaggg 168  Q
    ||||||| ||||| ||||||| |||||||||||   ||  |||||||||||||||| ||| ||||||   ||||| |||| ||||| |||||| || | |    
T  10784710 aaaaggatcaaagttgcaaaggggctaaatctttgggggccaaaattgtagtttttatacttagggggttaaaattgcaagtttttaaaagttaagggag 10784611  T
Q  169 ggaaaagtgcactttagc 186  Q
    ||||||||||||||||||    
T  10784610 ggaaaagtgcactttagc 10784593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 184
Target Start/End: Original strand, 26575028 - 26575150
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||||  ||||||| ||||| |||||||  | |||||||||  ||  |||||||||||||||||||| || |||   ||||| |||| |||||||||    
T  26575028 aaaattggcaaaaaggatcaaagttgcaaaggagttaaatcttagggggccaaaattgtagtttttgtacttaaggggttaaaattgcaagtttttgaaa 26575127  T
Q  160 gttagagggggaaaagtgcacttta 184  Q
    ||||||| ||  |||||||||||||    
T  26575128 gttagagagg--aaagtgcacttta 26575150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 55 - 163
Target Start/End: Original strand, 26949154 - 26949259
Alignment:
Q  55 tggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttt 154  Q
    |||| ||||||| ||||||  || |||||||||||| || ||||||||| | ||| ||||||||||||||| ||| ||||||  |||||| |||| ||||    
T  26949154 tggtcaaaattgatcaaaaacactaaagatgcaaaggggttaaatcttagaagattaaaattgtagtttttatacttagggg--caaaattgcaa-tttt 26949250  T
Q  155 tgaaagtta 163  Q
    |||||||||    
T  26949251 tgaaagtta 26949259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 186
Target Start/End: Original strand, 27322051 - 27322167
Alignment:
Q  69 caaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagaggg 168  Q
    ||||||||| ||| | |||||| |||||| |||||  ||   |||||||| ||||| |||| |||||| ||||||| ||||  ||||||||| ||| |||    
T  27322051 caaaaggacgaaataagcaaaggggctaattcttagggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatag-ggg 27322149  T
Q  169 ggaaaagtgcactttagc 186  Q
    ||||||||||||||||||    
T  27322150 ggaaaagtgcactttagc 27322167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 182
Target Start/End: Complemental strand, 29473154 - 29473082
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactt 182  Q
    |||||||||  ||||||| ||||||| |||||||| |||||||||| ||| |||  |||||||||||||||||    
T  29473154 caaaattgttatttttgttcatagggaaccaaaattgcaactttttaaaacttaaggggggaaaagtgcactt 29473082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 186
Target Start/End: Original strand, 3722533 - 3722607
Alignment:
Q  112 aaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||| |||| ||| ||  |||||| |||| |||||||||||||| | |||||||||||||||||||    
T  3722533 aaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggagggaaaagtgcactttagc 3722607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 4597462 - 4597408
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcacttta 184  Q
    ||||||||||||||||||||| ||||||||  ||| ||| |||||||||||||||    
T  4597462 ataggggaccaaaatcgcaacattttgaaacatagggggcgaaaagtgcacttta 4597408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 20973353 - 20973399
Alignment:
Q  140 aaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  20973353 aaaatcgcaacttattgaaacttaaagggggaaaagtgcactttagc 20973399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 162
Target Start/End: Complemental strand, 34831029 - 34830927
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||||||||| ||||||||| ||||| | ||||||||||||  ||  | ||||||| ||||| |||| |||||| |||||   |||| |||||||||    
T  34831029 aaaattggtcaaagggaccaaagttgcaatgtggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaatatgcaaatttttgaaa 34830930  T
Q  160 gtt 162  Q
    |||    
T  34830929 gtt 34830927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 3722483 - 3722536
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaat 99  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||| | ||||||||    
T  3722483 gcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaat 3722536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 186
Target Start/End: Complemental strand, 14822477 - 14822361
Alignment:
Q  70 aaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggg 169  Q
    |||||||  |||| ||||| ||| ||||||||||  ||  |||||||||||||| | ||| || ||| ||||||| |||| ||||||||| |||  |||     
T  14822477 aaaaggattaaagttgcaatgagactaaatcttagggggccaaaattgtagtttctatacttatggggccaaaattgcaagtttttgaaaattaaggggt 14822378  T
Q  170 gaaaagtgcactttagc 186  Q
    |||||||||||| ||||    
T  14822377 gaaaagtgcactctagc 14822361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 24051066 - 24051010
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||||||||||| |||||||| |||||||| |||||||| | ||||||    
T  24051066 atagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagc 24051010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 26710554 - 26710610
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||||||||||| |||||||| |||||||| |||||||| | ||||||    
T  26710554 atagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagc 26710610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 30494625 - 30494569
Alignment:
Q  118 tagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagt 176  Q
    |||||||| |||||||||  ||||||||| |||||||||||||||  ||||||||||||    
T  30494625 tagtttttatacatagggtgccaaaatcgtaactttttgaaagtt--agggggaaaagt 30494569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 4013912 - 4013968
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||||||||||| |||||||| |||| ||  |||||||||| ||||||    
T  4013912 atagggggccaaaatcgcaacattttgaaacttaggggacgaaaagtgcagtttagc 4013968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 16703643 - 16703571
Alignment:
Q  111 aaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||||||||  || || | |||||| |||| |||||||||| |||  ||||||||||||||||||||    
T  16703643 aaaattgtagtttttgtatttatgg-atcaaaattgcaagtttttgaaagatag--ggggaaaagtgcactttagc 16703571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 18749375 - 18749431
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||  |||||||||||| |||||||| |||||||| |||||||| | ||||||    
T  18749375 atagggggtcaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagc 18749431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 23124933 - 23124989
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||||||||||| |||| ||| ||||  || |||||||||| ||||||    
T  23124933 ataggggaccaaaatcgcaacattttaaaatttaggaggtgaaaagtgcaatttagc 23124989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 35102548 - 35102492
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| | ||||||||||| ||||||||  ||| ||| |||||||||||||||||    
T  35102548 atagggggctaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagc 35102492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 6464 - 6346
Alignment:
Q  66 ggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttaga 165  Q
    |||||||||||||||||||||||| |||||||||||||  || |||||||||||||||||||||||||||| | ||||||| |||||||||||| |||      
T  6464 ggtcaaaaggaccaaagatgcaaaaaggctaaatcttagggggtcaaaattgtagtttttgtacatagggggctaaaatcgtaactttttgaaacttaag 6365  T
Q  166 gggggaaaagtgcacttta 184  Q
    || ||||||||||||||||    
T  6364 ggcggaaaagtgcacttta 6346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 9001 - 9125
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||||||||||||| ||||||||||    ||||||||||||  ||  ||||||||||||||||||||||||| | | |||||| |||||||||||||    
T  9001 aaaattggtcaaaaggatcaaagatgcatgagggctaaatcttaggggc-caaaattgtagtttttgtacataggaggcaaaaatcacaactttttgaaa 9099  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
     |||  | || ||||||||||||||||    
T  9100 -ttaaggaggaaaaagtgcactttagc 9125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 71; Significance: 6e-32; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 360 - 234
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||||  ||||||| |||| |||||||| |||||| |||||  ||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  360 aaaattgggaaaaaggatcaaatatgcaaaggggctaattcttaggggaccaaaattatagtttttgtacataggggaccaaaattgcaactttttgaaa 261  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    ||||  ||||| |||||||||||||||    
T  260 gttaagggggggaaagtgcactttagc 234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 60 - 163
Target Start/End: Original strand, 952 - 1055
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||||  |||||||||||| |||||||| |||||| ||||   ||  ||||||| ||||||||||||||| ||||||||||| |||||||||| |||    
T  952 aaaattgggaaaaaggaccaaatatgcaaaggggctaattcttggggggccaaaattatagtttttgtacataagggaccaaaattgcaactttttaaaa 1051  T
Q  160 gtta 163  Q
    ||||    
T  1052 gtta 1055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 186
Target Start/End: Complemental strand, 1577 - 1440
Alignment:
Q  49 ttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgca 148  Q
    |||| ||||| |||||||  |||||||||||||||||||||  ||||||||||||  || |||||||| |||||||| ||||||||||  |||||| |||    
T  1577 ttgacttggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttagggggtcaaaattatagtttttatacatagggggtcaaaattgca 1478  T
Q  149 actttttgaaagttagagggggaaaagtgcactttagc 186  Q
    | ||||| |||||||||||||||||||| |||||||||    
T  1477 agttttttaaagttagagggggaaaagtacactttagc 1440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 186
Target Start/End: Complemental strand, 60228 - 60091
Alignment:
Q  49 ttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgca 148  Q
    |||| ||||| |||||||  ||||| |||||||||||||||| ||||||||| ||  || ||||||||||||||||| ||||||||||  |||||| |||    
T  60228 ttgacttggtcaaaattgaccaaaaagaccaaagatgcaaaggggctaaatcatagggggtcaaaattgtagtttttatacatagggggtcaaaattgca 60129  T
Q  149 actttttgaaagttagagggggaaaagtgcactttagc 186  Q
    | ||||| ||||||||||| ||||||||||||||||||    
T  60128 agtttttaaaagttagaggaggaaaagtgcactttagc 60091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 49 - 186
Target Start/End: Original strand, 61422 - 61559
Alignment:
Q  49 ttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgca 148  Q
    |||| ||||| |||||||  |||||||||||||||||||||  ||||||||| ||  ||  ||||||| |||||||||||| |||||| | ||||| |||    
T  61422 ttgacttggtcaaaattgaccaaaaggaccaaagatgcaaaagggctaaatcatagggggccaaaattatagtttttgtacttagggggctaaaattgca 61521  T
Q  149 actttttgaaagttagagggggaaaagtgcactttagc 186  Q
    | ||||||||| |||  || ||||||||||||||||||    
T  61522 agtttttgaaaattaagggaggaaaagtgcactttagc 61559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 69; Significance: 9e-31; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 49393 - 49533
Alignment:
Q  46 gcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatc 145  Q
    ||||||| ||||| |||||||| |||||||||||||| |||||||  |||||||||||  || ||||||||||||||||| |  ||||||| |||||||     
T  49393 gcgttgatttggtcaaaattggccaaaaggaccaaagttgcaaaggagctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaatt 49492  T
Q  146 gcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||||| |||||||  ||| |||||||||||||||||    
T  49493 gcaacttttttaaagttaaggggagaaaagtgcactttagc 49533  T

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Target: scaffold0049 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 70 - 186
Target Start/End: Original strand, 7399 - 7515
Alignment:
Q  70 aaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggg 169  Q
    ||||||| ||||| ||||||| ||||||||||||  || ||||||||||||||| ||||||||||||  |||||||| |||||||| ||| |||||||||    
T  7399 aaaaggatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttctgtacatagggggtcaaaatcgtaactttttcaaacttagagggg 7498  T
Q  170 gaaaagtgcactttagc 186  Q
    || ||||||||||||||    
T  7499 gacaagtgcactttagc 7515  T

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Target: scaffold0049; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 7613 - 7539
Alignment:
Q  111 aaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||||||| ||||||||  |||| |  ||||||||| ||| ||| |||||| |||||||||||||||    
T  7613 aaaattgtagtttttgttcatagggggtcaaatttacaactttttcaaacttataggggg-aaagtgcactttagc 7539  T

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Target: scaffold0320 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 35 - 186
Target Start/End: Complemental strand, 19640 - 19489
Alignment:
Q  35 ctgccacgtacgcgttgaattggttaaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagg 134  Q
    |||||||||| |||||||||  || |||||||  ||||| || ||||||||||||| || |||||||||  |||||||||||||||||||| ||| ||||    
T  19640 ctgccacgtaggcgttgaataagtcaaaattgaccaaaatgatcaaagatgcaaaggggttaaatcttaggggatcaaaattgtagtttttatacttagg 19541  T
Q  135 ggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    || ||||||| ||||  |||||||| |||  ||||||||| |||||||||||    
T  19540 gggccaaaattgcaaggttttgaaaattaaggggggaaaaatgcactttagc 19489  T

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Target: scaffold0632 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 3282 - 3407
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    ||||||||  ||||||| ||||| ||||||| ||||||||||||  ||| ||||||| |||||||||||| || |||  |||||| | || |||||||||    
T  3282 aaaattggcaaaaaggatcaaagttgcaaaggggctaaatcttaggggaccaaaattatagtttttgtacctatggggtcaaaattgtaagtttttgaaa 3381  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    || || |||||||||||||||||||||    
T  3382 gtaag-gggggaaaagtgcactttagc 3407  T

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Target: scaffold0227 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 143 - 219
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||| |||||  ||||| |||| ||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  143 caaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagc 219  T

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Target: scaffold0294 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 92 - 186
Target Start/End: Original strand, 5444 - 5538
Alignment:
Q  92 ggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||||||  ||  |||||||||||||||||||| || |||  |||||| |||| ||||||||| |||| |||||||||||||||||||||    
T  5444 ggctaaatcttaagggggcaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaaattagggggggaaaagtgcactttagc 5538  T

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Target: scaffold0302 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 17547 - 17471
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||||||||||||||| |||||| ||||||| |||| ||||| |||||||  |||| ||||||||||||||||    
T  17547 caaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaagggggaaaaagtgcactttagc 17471  T

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Target: scaffold0302; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 18800 - 18876
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| |||||||||||| |||||||||||||| |||| ||||| ||||||||  ||| ||||||||||||||||    
T  18800 caaaattatagtttttgtacctaggggaccaaaattgcaaatttttaaaagttaggagggaaaaagtgcactttagc 18876  T

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Target: scaffold0369 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 73 - 186
Target Start/End: Complemental strand, 13305 - 13194
Alignment:
Q  73 aggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaa 172  Q
    ||||||||| |||||||   | |||||||||  |||  |||||||||||||| ||||||||| |  ||||||| ||||||||| ||||||  ||||||||    
T  13305 aggaccaaatatgcaaaagagttaaatcttaggggacaaaaattgtagttttcgtacataggaggtcaaaatcacaactttttcaaagtt--agggggaa 13208  T
Q  173 aagtgcactttagc 186  Q
    ||||||||||||||    
T  13207 aagtgcactttagc 13194  T

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Target: scaffold0059 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 4704 - 4829
Alignment:
Q  60 aaaattggtcaaaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaa 159  Q
    |||||||||||||||||  |||| ||||| | |||||||  ||| ||| ||||||||||||||| ||||  |||||| ||||||| |||  ||||| |||    
T  4704 aaaattggtcaaaaggattaaagttgcaatggggctaaaatttagagggtcaaaattgtagtttctgtatttagggggccaaaattgcatgtttttaaaa 4803  T
Q  160 gttagagggggaaaagtgcactttagc 186  Q
    ||||| || || |||||||||||||||    
T  4804 gttag-ggagggaaagtgcactttagc 4829  T

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Target: scaffold0321 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 109 - 185
Target Start/End: Complemental strand, 18806 - 18730
Alignment:
Q  109 tcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttag 185  Q
    ||||||||||||||||||| |||||| |  ||||||||||||||||| |||||||   ||| |||||||||||||||    
T  18806 tcaaaattgtagtttttgttcataggaggtcaaaatcgcaactttttaaaagttaagagggaaaaagtgcactttag 18730  T

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Target: scaffold0045 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 136
Target Start/End: Complemental strand, 48423 - 48358
Alignment:
Q  71 aaaggaccaaagatgcaaagaggctaaatcttataggatcaaaattgtagtttttgtacatagggg 136  Q
    |||||||||||||||||||| |  |||||||||  ||| ||||||| |||||||||||||||||||    
T  48423 aaaggaccaaagatgcaaagggaataaatcttaggggaccaaaattatagtttttgtacatagggg 48358  T

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Target: scaffold0419 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 3018 - 2962
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||||||||||| ||||||||  ||| ||| |||||||||||||||||    
T  3018 atagggggccaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagc 2962  T

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Target: scaffold0186 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 186
Target Start/End: Complemental strand, 23174 - 23082
Alignment:
Q  92 ggctaaatcttataggatcaaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||  ||| ||| ||||| ||||| |||| ||| ||  |||||| |||| ||||||||||||||  ||||||||||||||||||||    
T  23174 ggctaaagcttaggggagcaagattgttgttttggtacttagagggacaaaattgcaagtttttgaaagttag--ggggaaaagtgcactttagc 23082  T

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Target: scaffold0093 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 2489 - 2564
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaacttttt-gaaagttagagggggaaaagtgcactttagc 186  Q
    |||||| || |||||||||| ||||||  |||||| |||| ||||| |||||||||  ||||||||||||||||||||    
T  2489 caaaatggttgtttttgtacttagggggtcaaaattgcaagttttttgaaagttag--ggggaaaagtgcactttagc 2564  T

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Target: scaffold0093; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 7112 - 7187
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaacttttt-gaaagttagagggggaaaagtgcactttagc 186  Q
    |||||| || |||||||||| ||||||  |||||| |||| ||||| |||||||||  ||||||||||||||||||||    
T  7112 caaaatggttgtttttgtacttagggggtcaaaattgcaagttttttgaaagttag--ggggaaaagtgcactttagc 7187  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 454987 - 454930
Alignment:
Q  129 cataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||| |||||||| ||||||||| ||| |||  ||| |||||||||||||||||    
T  454987 catagggggccaaaatcacaactttttaaaacttaatgggtgaaaagtgcactttagc 454930  T

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Target: scaffold0112 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 37224 - 37149
Alignment:
Q  110 caaaattgtagtttttgtacataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||||| |||||||||| ||||||  |||||| |||| ||||| |||   | ||||||||||||||||||||||    
T  37224 caaaattgttgtttttgtacttagggggtcaaaattgcaaattttttaaaag-atagggggaaaagtgcactttagc 37149  T

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Target: scaffold0062 (Bit Score: 29; Significance: 0.0000007; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 49905 - 49961
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||| |||||||||||| || |||||  ||| ||| |||||||||||||||||    
T  49905 ataggggatcaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagc 49961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 62444 - 62500
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    |||||||| |||||||||||| || |||||  ||| ||| |||||||||||||||||    
T  62444 ataggggatcaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagc 62500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 61871 - 61815
Alignment:
Q  130 ataggggaccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagc 186  Q
    ||||||| ||||||||||||| |||||||| ||||| || |||||||| | ||||||    
T  61871 atagggggccaaaatcgcaacattttgaaacttagaaggcgaaaagtgaagtttagc 61815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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