View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10201_low_16 (Length: 314)
Name: NF10201_low_16
Description: NF10201
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10201_low_16 |
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Alignment Details
Target: chr5 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 31011291 - 31010994
Alignment:
| Q |
1 |
aggatgcacatgccgaagtctcttcccaagatccctccagaagcatcacatcttaattcgaaagcctttaatcttgaagaattacccttgcaaatatttc |
100 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31011291 |
aggatgaacatgccgaagtctcttcccaagatccctccagaagcatcacatcttaattcgaaagcctttaatcttgaagaattacccttgcaaatatttc |
31011192 |
T |
|
| Q |
101 |
catttatggatttactagctacaaaagaagattggtctatcatcgtgtctgtccatctaacagatttacatacattttaatgcaacattcaattttcact |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31011191 |
catttatggatttactagctacaaaagaagattggtctatcatcgtgtctgtccatctaacagatttacatacattttaatgcaacattcaattttcact |
31011092 |
T |
|
| Q |
201 |
tcaagataaaaactccttagaactccgaatagaatgaattcaattatttatctcatatatttatagaacgacccattacttgttgaaatacttgtttt |
298 |
Q |
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|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
31011091 |
tcaagatataaactccttagaactccgaatagaatgaactcaattatttatctcatatatttatagaacgaaccattacttgttgaaatacttgtttt |
31010994 |
T |
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