View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10201_low_22 (Length: 253)
Name: NF10201_low_22
Description: NF10201
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10201_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 429964 - 430206
Alignment:
| Q |
1 |
ttaaccaaagttttaatagttagccccaaactggtacaatgtctcagtgaaacagtttagtgtttcccaactgaacaaaaactacctttataaaacacta |
100 |
Q |
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| T |
429964 |
ttaaccaaagttttaatagttagccccaaactggtacaatgtctcggtgaaacagtttagtgtttcccaactgaacaaaaactacctttataaaacacta |
430063 |
T |
|
| Q |
101 |
actttacattttctaactggactaattccttgtgaaccaaaatgtaccaactttatattattaactgatattatgaccaactttatatttaagaggatgg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
430064 |
actttacattttctaactggactaattccttgtgaaccaaaatgtaccaactttatattattaactgatattataaccaactttatatttaagaggatgg |
430163 |
T |
|
| Q |
201 |
tgatgtagactaaacggcgttgatgtctcttgttttgtctctg |
243 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
430164 |
tgatgtagactaaacggcgttgatgtctcttgttttgtctctg |
430206 |
T |
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