View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10204_13 (Length: 341)
Name: NF10204_13
Description: NF10204
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10204_13 |
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Alignment Details
Target: chr3 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 5 - 331
Target Start/End: Original strand, 25090783 - 25091109
Alignment:
| Q |
5 |
catccttgacacatgttttatgttatgtgtctttaattaattgagttatttgcacttcatatacgtattaagtattcctatattgctatacaaccaaatc |
104 |
Q |
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| T |
25090783 |
catccttgacacatgttttatgttatgtgtctttaattaattgagttatttgcacttcatatacgtattaagtattcctatattgctatacaaccaaatc |
25090882 |
T |
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| Q |
105 |
ctaaaagggacattacagcagaatagttcctctttataaggttgttttttcttgctcagtcttgcattgcatattcaagagagtaactagctaagaaaga |
204 |
Q |
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| T |
25090883 |
ctaaaagagacattacagcagaatagttcctctttataaggttgttttttcttgctcaatcttgcattgcatattcaagagagtaactagctaagaaaga |
25090982 |
T |
|
| Q |
205 |
agaagctctatagcagcatttctttgttgggaagagaggtgttgaattcaaactaagggttgtcatggcggcggaaggatttcgaattatactattgctg |
304 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25090983 |
agaagctctatagcagcatttctttgttgggaagagaggtgtagaattcaaactaagggttgtcatggcggcggaaggatttcgaattatactattgctg |
25091082 |
T |
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| Q |
305 |
gttgcatgtttgcttccattgtctgtg |
331 |
Q |
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||||||||||||||||||||||||||| |
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| T |
25091083 |
gttgcatgtttgcttccattgtctgtg |
25091109 |
T |
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