View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10204_5 (Length: 557)

Name: NF10204_5
Description: NF10204
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10204_5
NF10204_5
[»] chr3 (42 HSPs)
chr3 (1-528)||(1121140-1121667)
chr3 (266-391)||(53996618-53996743)
chr3 (259-391)||(34420696-34420828)
chr3 (264-381)||(26573105-26573222)
chr3 (264-381)||(45620890-45621008)
chr3 (272-414)||(8247717-8247861)
chr3 (291-414)||(13628820-13628944)
chr3 (272-414)||(46421065-46421209)
chr3 (272-382)||(40272873-40272984)
chr3 (305-391)||(54374398-54374484)
chr3 (266-414)||(25944449-25944597)
chr3 (267-414)||(45948868-45949017)
chr3 (272-381)||(13730666-13730776)
chr3 (272-382)||(22609752-22609861)
chr3 (263-349)||(35417893-35417979)
chr3 (286-414)||(29366750-29366879)
chr3 (263-336)||(53062015-53062088)
chr3 (305-414)||(516428-516539)
chr3 (291-383)||(5173781-5173872)
chr3 (305-377)||(39212009-39212081)
chr3 (305-391)||(1217109-1217192)
chr3 (263-382)||(29106526-29106645)
chr3 (272-349)||(10870045-10870123)
chr3 (309-379)||(54032623-54032693)
chr3 (286-382)||(22122978-22123072)
chr3 (305-362)||(30928228-30928285)
chr3 (259-368)||(44403631-44403740)
chr3 (272-382)||(7696948-7697057)
chr3 (286-382)||(26869707-26869802)
chr3 (291-382)||(7942995-7943086)
chr3 (307-382)||(12914096-12914171)
chr3 (280-379)||(19730996-19731095)
chr3 (319-381)||(14986990-14987052)
chr3 (305-383)||(45139538-45139616)
chr3 (314-383)||(10795485-10795554)
chr3 (272-348)||(52926305-52926382)
chr3 (286-382)||(4495725-4495821)
chr3 (319-391)||(55401209-55401281)
chr3 (286-381)||(9607203-9607298)
chr3 (305-391)||(33926102-33926187)
chr3 (286-382)||(39203516-39203610)
chr3 (319-382)||(31592882-31592943)
[»] chr1 (51 HSPs)
chr1 (263-391)||(2435839-2435967)
chr1 (268-382)||(18724606-18724720)
chr1 (263-384)||(17470405-17470526)
chr1 (263-386)||(22327077-22327200)
chr1 (266-386)||(50811920-50812041)
chr1 (263-355)||(2435981-2436073)
chr1 (291-383)||(9939467-9939559)
chr1 (306-414)||(45264429-45264537)
chr1 (272-382)||(14617024-14617135)
chr1 (273-382)||(20036208-20036318)
chr1 (264-382)||(44485170-44485288)
chr1 (286-383)||(27201648-27201745)
chr1 (305-381)||(10668245-10668321)
chr1 (265-386)||(15511206-15511329)
chr1 (272-414)||(18944629-18944773)
chr1 (286-382)||(46248014-46248110)
chr1 (286-381)||(20004154-20004249)
chr1 (272-382)||(32632618-32632728)
chr1 (269-391)||(27136704-27136826)
chr1 (272-381)||(30395790-30395900)
chr1 (263-348)||(25554817-25554902)
chr1 (286-379)||(46991805-46991898)
chr1 (286-414)||(23768350-23768477)
chr1 (272-378)||(34725163-34725268)
chr1 (257-381)||(50760288-50760412)
chr1 (263-382)||(34679280-34679399)
chr1 (264-386)||(19701549-19701671)
chr1 (281-383)||(35117828-35117930)
chr1 (286-379)||(6925101-6925194)
chr1 (263-336)||(6983916-6983989)
chr1 (273-382)||(11596501-11596609)
chr1 (286-382)||(38478343-38478437)
chr1 (306-382)||(25468324-25468400)
chr1 (286-382)||(41319867-41319963)
chr1 (263-334)||(10378834-10378905)
chr1 (305-383)||(35005143-35005221)
chr1 (306-382)||(12126898-12126972)
chr1 (272-336)||(25290149-25290214)
chr1 (286-382)||(4430087-4430183)
chr1 (305-349)||(31272468-31272512)
chr1 (264-336)||(52910196-52910268)
chr1 (259-349)||(22930161-22930252)
chr1 (273-391)||(33222971-33223089)
chr1 (270-345)||(35019215-35019290)
chr1 (274-336)||(47214499-47214562)
chr1 (263-337)||(6358112-6358186)
chr1 (266-336)||(23371105-23371175)
chr1 (305-382)||(35253248-35253323)
chr1 (272-383)||(19932815-19932924)
chr1 (357-414)||(46859138-46859195)
chr1 (272-382)||(45812598-45812707)
[»] chr8 (36 HSPs)
chr8 (262-383)||(44781566-44781687)
chr8 (263-391)||(42083751-42083879)
chr8 (263-391)||(35105884-35106006)
chr8 (262-391)||(14018021-14018150)
chr8 (272-382)||(12670311-12670420)
chr8 (272-382)||(30454158-30454267)
chr8 (286-382)||(36720774-36720870)
chr8 (263-391)||(44742571-44742699)
chr8 (272-382)||(29521746-29521857)
chr8 (272-381)||(7136591-7136701)
chr8 (272-381)||(39461058-39461168)
chr8 (286-382)||(2626497-2626596)
chr8 (286-379)||(28817690-28817783)
chr8 (309-382)||(44530150-44530223)
chr8 (286-414)||(20284099-20284230)
chr8 (269-369)||(30962847-30962947)
chr8 (291-382)||(18164821-18164911)
chr8 (272-381)||(20869560-20869668)
chr8 (286-381)||(25250500-25250595)
chr8 (291-382)||(31457156-31457246)
chr8 (273-382)||(17823540-17823650)
chr8 (286-414)||(21070727-21070859)
chr8 (279-381)||(22598128-22598230)
chr8 (309-382)||(8897825-8897898)
chr8 (305-382)||(36918121-36918198)
chr8 (309-381)||(6760823-6760895)
chr8 (269-381)||(8484000-8484112)
chr8 (286-382)||(13160680-13160775)
chr8 (271-349)||(28407378-28407457)
chr8 (272-382)||(35261642-35261753)
chr8 (310-382)||(12625891-12625964)
chr8 (309-381)||(26954133-26954206)
chr8 (309-382)||(45071266-45071338)
chr8 (314-382)||(5135350-5135418)
chr8 (307-382)||(389642-389719)
chr8 (286-335)||(24245429-24245478)
[»] chr4 (54 HSPs)
chr4 (263-391)||(487187-487315)
chr4 (264-381)||(19027804-19027921)
chr4 (272-381)||(16408665-16408775)
chr4 (261-391)||(54175017-54175146)
chr4 (263-362)||(54966976-54967075)
chr4 (271-349)||(54640433-54640511)
chr4 (305-386)||(7038050-7038130)
chr4 (263-382)||(17043455-17043571)
chr4 (263-388)||(23580263-23580388)
chr4 (309-414)||(40915830-40915933)
chr4 (272-382)||(20224947-20225056)
chr4 (264-391)||(20908689-20908817)
chr4 (290-382)||(41018855-41018946)
chr4 (272-382)||(48598886-48598995)
chr4 (272-382)||(5648222-5648332)
chr4 (272-382)||(6430687-6430797)
chr4 (274-349)||(42164242-42164317)
chr4 (272-381)||(10660367-10660477)
chr4 (272-381)||(10874512-10874622)
chr4 (272-381)||(21646927-21647037)
chr4 (305-391)||(44357217-44357303)
chr4 (263-380)||(51420528-51420646)
chr4 (286-367)||(43035226-43035307)
chr4 (263-349)||(30496414-30496501)
chr4 (272-382)||(30639343-30639453)
chr4 (307-382)||(47443956-47444031)
chr4 (263-349)||(49938684-49938771)
chr4 (274-382)||(11054209-11054316)
chr4 (265-383)||(25343144-25343262)
chr4 (325-414)||(20639688-20639777)
chr4 (271-391)||(30581518-30581639)
chr4 (286-382)||(47528591-47528685)
chr4 (290-382)||(7385537-7385629)
chr4 (272-367)||(17315375-17315470)
chr4 (305-349)||(25463119-25463163)
chr4 (263-335)||(50856344-50856416)
chr4 (272-382)||(5306725-5306835)
chr4 (277-356)||(30690270-30690349)
chr4 (305-382)||(9832374-9832449)
chr4 (320-382)||(9987895-9987957)
chr4 (272-381)||(16911525-16911635)
chr4 (305-382)||(10380004-10380080)
chr4 (305-362)||(37494848-37494905)
chr4 (263-345)||(32629366-32629445)
chr4 (262-382)||(47441591-47441711)
chr4 (269-348)||(12257688-12257767)
chr4 (332-414)||(12711479-12711561)
chr4 (320-391)||(21489099-21489170)
chr4 (306-349)||(39077888-39077931)
chr4 (305-382)||(29207959-29208034)
chr4 (270-391)||(49938491-49938612)
chr4 (260-345)||(6966044-6966129)
chr4 (262-391)||(39029113-39029242)
chr4 (286-383)||(44363192-44363289)
[»] chr7 (48 HSPs)
chr7 (263-382)||(28362206-28362325)
chr7 (266-384)||(7644914-7645032)
chr7 (264-382)||(23419735-23419853)
chr7 (274-382)||(19426950-19427059)
chr7 (286-382)||(11617649-11617745)
chr7 (264-382)||(48123545-48123663)
chr7 (305-391)||(29907416-29907502)
chr7 (272-381)||(46354157-46354267)
chr7 (309-382)||(7879639-7879712)
chr7 (265-382)||(19265772-19265888)
chr7 (307-379)||(18512517-18512588)
chr7 (291-382)||(42391161-42391250)
chr7 (263-382)||(6736845-6736963)
chr7 (272-382)||(42798632-42798743)
chr7 (286-382)||(10693134-10693228)
chr7 (272-382)||(48735183-48735293)
chr7 (272-382)||(2541080-2541192)
chr7 (264-383)||(12473259-12473379)
chr7 (272-382)||(21172070-21172179)
chr7 (286-382)||(33871971-33872066)
chr7 (309-381)||(47716460-47716532)
chr7 (286-381)||(42805502-42805597)
chr7 (286-381)||(43557450-43557545)
chr7 (264-334)||(13805058-13805128)
chr7 (264-382)||(19266406-19266524)
chr7 (303-349)||(31591201-31591247)
chr7 (263-349)||(32233228-32233314)
chr7 (261-386)||(16341231-16341356)
chr7 (286-383)||(22699030-22699127)
chr7 (306-383)||(35203437-35203514)
chr7 (286-362)||(7193063-7193139)
chr7 (291-382)||(11741778-11741867)
chr7 (272-382)||(32758224-32758333)
chr7 (307-382)||(27629633-27629708)
chr7 (272-349)||(47077947-47078025)
chr7 (277-382)||(14099067-14099172)
chr7 (277-382)||(14409084-14409189)
chr7 (272-379)||(35334880-35334986)
chr7 (319-382)||(2662996-2663057)
chr7 (262-413)||(42101915-42102066)
chr7 (312-382)||(15108458-15108527)
chr7 (272-345)||(42495933-42496007)
chr7 (268-349)||(3469273-3469354)
chr7 (286-383)||(5180217-5180314)
chr7 (309-382)||(38262257-38262330)
chr7 (286-382)||(42476851-42476945)
chr7 (291-382)||(8149006-8149098)
chr7 (272-383)||(14732883-14732994)
[»] chr6 (22 HSPs)
chr6 (262-386)||(7947429-7947553)
chr6 (291-414)||(29355885-29356009)
chr6 (273-414)||(12221945-12222088)
chr6 (263-382)||(13905040-13905159)
chr6 (272-382)||(3815138-3815249)
chr6 (272-382)||(1346927-1347036)
chr6 (272-382)||(1354818-1354927)
chr6 (286-414)||(9161101-9161229)
chr6 (305-349)||(2166506-2166550)
chr6 (305-349)||(2178139-2178183)
chr6 (308-383)||(14553511-14553586)
chr6 (261-347)||(12889379-12889465)
chr6 (272-376)||(8409206-8409311)
chr6 (305-362)||(17432337-17432394)
chr6 (309-381)||(6024234-6024306)
chr6 (272-358)||(14975165-14975252)
chr6 (291-378)||(20400650-20400737)
chr6 (341-386)||(24751131-24751176)
chr6 (313-382)||(33138838-33138907)
chr6 (309-349)||(22967172-22967212)
chr6 (309-349)||(23821181-23821221)
chr6 (286-382)||(32728217-32728313)
[»] chr5 (32 HSPs)
chr5 (263-391)||(208980-209107)
chr5 (281-410)||(28516467-28516596)
chr5 (272-368)||(23974744-23974840)
chr5 (272-414)||(38879544-38879688)
chr5 (272-382)||(24448853-24448964)
chr5 (263-348)||(39301078-39301163)
chr5 (272-382)||(35710276-35710385)
chr5 (272-382)||(41014282-41014392)
chr5 (272-381)||(4619168-4619278)
chr5 (305-383)||(42924894-42924972)
chr5 (272-383)||(43334165-43334278)
chr5 (286-381)||(27328730-27328825)
chr5 (268-382)||(19143004-19143117)
chr5 (305-383)||(22187282-22187360)
chr5 (305-382)||(32703421-32703496)
chr5 (272-382)||(8170045-8170154)
chr5 (262-338)||(10634251-10634327)
chr5 (286-349)||(37024648-37024711)
chr5 (263-334)||(39079875-39079946)
chr5 (311-382)||(43574609-43574680)
chr5 (272-349)||(1565394-1565472)
chr5 (328-414)||(29334415-29334501)
chr5 (309-382)||(1405188-1405261)
chr5 (312-381)||(41425952-41426021)
chr5 (274-414)||(12006358-12006500)
chr5 (319-381)||(13801831-13801893)
chr5 (327-381)||(20135623-20135677)
chr5 (292-349)||(1850624-1850681)
chr5 (263-414)||(2838732-2838883)
chr5 (305-362)||(22025540-22025597)
chr5 (264-381)||(24903758-24903875)
chr5 (305-382)||(34074623-34074700)
[»] chr2 (36 HSPs)
chr2 (263-382)||(32781349-32781468)
chr2 (263-383)||(10543652-10543773)
chr2 (261-387)||(29419941-29420071)
chr2 (264-392)||(44521425-44521552)
chr2 (268-382)||(5450245-5450360)
chr2 (272-382)||(12023980-12024090)
chr2 (286-383)||(24200685-24200782)
chr2 (265-381)||(4516413-4516529)
chr2 (272-414)||(14530281-14530425)
chr2 (272-382)||(8455377-8455488)
chr2 (272-382)||(11514399-11514510)
chr2 (266-382)||(99326-99440)
chr2 (286-382)||(17667980-17668076)
chr2 (263-414)||(15296436-15296589)
chr2 (263-348)||(17380331-17380416)
chr2 (309-382)||(17623565-17623638)
chr2 (286-414)||(17896237-17896365)
chr2 (286-382)||(23397744-23397838)
chr2 (305-381)||(19614989-19615065)
chr2 (305-382)||(10546159-10546237)
chr2 (284-349)||(44604830-44604895)
chr2 (291-382)||(21779322-21779411)
chr2 (281-369)||(33795258-33795346)
chr2 (286-377)||(5841006-5841097)
chr2 (307-382)||(12315713-12315787)
chr2 (307-382)||(19977775-19977850)
chr2 (266-381)||(23145760-23145874)
chr2 (266-381)||(23557550-23557664)
chr2 (286-381)||(40416933-40417028)
chr2 (309-347)||(13245182-13245220)
chr2 (263-382)||(31821404-31821518)
chr2 (267-336)||(35017776-35017846)
chr2 (286-383)||(7214512-7214609)
chr2 (272-382)||(9671143-9671253)
chr2 (309-382)||(14444730-14444802)
chr2 (286-382)||(25249799-25249894)
[»] scaffold0049 (1 HSPs)
scaffold0049 (305-383)||(58974-59052)
[»] scaffold0258 (1 HSPs)
scaffold0258 (272-414)||(13054-13195)
[»] scaffold0187 (2 HSPs)
scaffold0187 (286-382)||(10111-10205)
scaffold0187 (286-382)||(20439-20533)
[»] scaffold0057 (2 HSPs)
scaffold0057 (309-382)||(46832-46905)
scaffold0057 (261-331)||(46995-47065)
[»] scaffold0311 (1 HSPs)
scaffold0311 (286-382)||(10788-10884)
[»] scaffold0254 (1 HSPs)
scaffold0254 (305-349)||(4154-4198)
[»] scaffold0168 (1 HSPs)
scaffold0168 (272-382)||(30542-30651)
[»] scaffold0223 (1 HSPs)
scaffold0223 (305-382)||(11128-11203)
[»] scaffold1176 (1 HSPs)
scaffold1176 (286-349)||(1679-1742)
[»] scaffold0116 (1 HSPs)
scaffold0116 (286-349)||(8869-8932)


Alignment Details
Target: chr3 (Bit Score: 401; Significance: 0; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 401; E-Value: 0
Query Start/End: Original strand, 1 - 528
Target Start/End: Complemental strand, 1121667 - 1121140
Alignment:
Q  1 tctccgttggtggtgaaagtagacatcgtctcaccagagccgccatggttcttcaccaccttagcggtcaaacccctgttctctccaaaggtaattttg- 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  1121667 tctccgttggtggtgaaagtagacatcgtctcaccagagccgccatggttcttcaccaccttagcggtcaaacccctgttctctctaaaggtaattttgc 1121568  T
Q  100 ----agaggaga-------agcataggttttattttttaggttagaaagcagattttgaattaactataaagctctatataaagctctatagggagagct 188  Q
        |  |  |        | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||||    
T  1121567 tcaaatggttgcttaatttatcataggttttattttttaggttagaaagcagattttgaattaactataaagctctata------------gggagagct 1121480  T
Q  189 ttaccaccaattttgggtcttacccgactcgagaaattagtctctacagttgtgtgcaaggaggatatataataaagggggagccttggcgcaacgctaa 288  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1121479 ttaccaccaattttaggtcttacccgactcgagaaattagtctctacagttgtgtgcaaggaggatatataataaagggggagccttggcgcaacactaa 1121380  T
Q  289 atttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcg 388  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  1121379 atttgttgtccggtggctgaaaggtcacgtgtttaagtcctggaaacaacttcttgtgtaagaaataaggtgagactgcgtacaatacaccaaaatggcg 1121280  T
Q  389 ggagtctttctcagaccctgcgtatggttctcgagtacatgggccttagcctcaagatacatgatgtagtaactagtttgatccacaaaatacttcttcc 488  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1121279 ggagcctttctcagaccctgcgtatggttctcgagtacatgggccttagcctcaagatacatgatgtagtaactagtttgatccacaaaatacttcttcc 1121180  T
Q  489 aaggctttgaccaaaattttcatcatttaggactagtaag 528  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  1121179 aaggctttgaccaaaattttcatcatttaggactagtaag 1121140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 266 - 391
Target Start/End: Complemental strand, 53996743 - 53996618
Alignment:
Q  266 ggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagact 365  Q
    ||||||||||||||| ||| |||||||||||||   || ||||||||||||||||||||||| |||||||||| |||||||||| ||| | |||||| ||    
T  53996743 ggggagccttggcgctacggtaaatttgttgtcatttgactgaaaggtcacgtgttcaagtcgtggaaacaacctcttgtgtaaaaaacagggtaaggct 53996644  T
Q  366 gcgtccaatacaccaaaatggcggga 391  Q
    || | |||||||||||||||| ||||    
T  53996643 gcttacaatacaccaaaatggtggga 53996618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 259 - 391
Target Start/End: Complemental strand, 34420828 - 34420696
Alignment:
Q  259 aataaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataagg 358  Q
    ||||||||||| |||||||||||||  |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||| ||| | ||    
T  34420828 aataaagggggggccttggcgcaacagtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaggg 34420729  T
Q  359 taagactgcgtccaatacaccaaaatggcggga 391  Q
    |||| |||||| | |||||||||||||| ||||    
T  34420728 taaggctgcgtaccatacaccaaaatggtggga 34420696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 264 - 381
Target Start/End: Original strand, 26573105 - 26573222
Alignment:
Q  264 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 363  Q
    ||||||| ||||||||||||| |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | || ||||||| ||| | ||||||     
T  26573105 agggggacccttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaacagggtaagg 26573204  T
Q  364 ctgcgtccaatacaccaa 381  Q
    |||||| |||||||||||    
T  26573205 ctgcgtacaatacaccaa 26573222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 264 - 381
Target Start/End: Complemental strand, 45621008 - 45620890
Alignment:
Q  264 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaag 362  Q
    ||||||||||||||||||||| |||| ||||||||  ||| ||||||||||||| |||||||| ||||||||| | |||||||| || ||| | ||||||    
T  45621008 agggggagccttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaaaacagggtaag 45620909  T
Q  363 actgcgtccaatacaccaa 381  Q
     |||||| |||||||||||    
T  45620908 gctgcgtacaatacaccaa 45620890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 272 - 414
Target Start/End: Complemental strand, 8247861 - 8247717
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||| ||| | ||||||  |||||     
T  8247861 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggttgcgta 8247762  T
Q  371 caatacaccaa-aatggcgggagtctttctcagaccctgcgtatg 414  Q
    ||||||||||| ||||| |||| || ||| | |||||||||||||    
T  8247761 caatacaccaataatggtgggactccttcccggaccctgcgtatg 8247717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 291 - 414
Target Start/End: Complemental strand, 13628944 - 13628820
Alignment:
Q  291 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa-aatggcgg 389  Q
    ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||||||| | |||||| |||||| ||||||||||| ||||| ||    
T  13628944 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctgcgtacaatacaccaataatggtgg 13628845  T
Q  390 gagtctttctcagaccctgcgtatg 414  Q
    ||  | ||| | |||||||||||||    
T  13628844 gaccccttcccggaccctgcgtatg 13628820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 272 - 414
Target Start/End: Complemental strand, 46421209 - 46421065
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| || |||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||||||     
T  46421209 ccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 46421110  T
Q  371 caatacaccaa-aatggcgggagtctttctcagaccctgcgtatg 414  Q
    ||||||||||| ||||| ||||  | ||| | |||||||||||||    
T  46421109 caatacaccaataatggtgggaccccttcccggaccctgcgtatg 46421065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 272 - 382
Target Start/End: Complemental strand, 40272984 - 40272873
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||| | |||||||||||||||||||| |||||||||| ||| | |||||| ||||||     
T  40272984 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcgta 40272885  T
Q  371 caatacaccaaa 382  Q
    ||||||||||||    
T  40272884 caatacaccaaa 40272873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 305 - 391
Target Start/End: Complemental strand, 54374484 - 54374398
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcggga 391  Q
    ||||||||||||  ||||||||| |||||||||| |||||||||| ||||| |||||| |||||| |||| ||||||||||| ||||    
T  54374484 ctgaaaggtcacaggttcaagtcttggaaacaacctcttgtgtaaaaaatagggtaaggctgcgtacaatccaccaaaatggtggga 54374398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 266 - 414
Target Start/End: Original strand, 25944449 - 25944597
Alignment:
Q  266 ggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagact 365  Q
    ||||||||||||||||||  |||| ||||||||  ||| ||||||||||| | |||||||||||||||||  | ||| |||||| |||   || ||| ||    
T  25944449 ggggagccttggcgcaacagtaaagttgttgtcacgtgactgaaaggtcatgggttcaagtcctggaaaccgcctctcgtgtaaaaaactgggcaaggct 25944548  T
Q  366 gcgtccaatacaccaaaatggcgggagtctttctcagaccctgcgtatg 414  Q
    | || |||||||||||||||| ||||  | ||| | |||||||||||||    
T  25944549 gagtacaatacaccaaaatggtgggaccccttccctgaccctgcgtatg 25944597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 414
Target Start/End: Complemental strand, 45949017 - 45948868
Alignment:
Q  267 gggagccttggcgcaacgctaaatttgttgtccggtggctgaa---aggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 363  Q
    |||||||||||||||||| | || ||||| ||  ||| |||||   |||||||| |||||| ||||||||||||| |||||||||| ||||| ||||||     
T  45949017 gggagccttggcgcaacggtgaagttgttttcatgtgactgaaggaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaatagggtaagg 45948918  T
Q  364 ctgcgtccaatacaccaaaatggcgggagtctttctcagaccctgcgtatg 414  Q
    |||| | ||||||||| || ||| ||||  | ||||| |||||||||||||    
T  45948917 ctgcatacaatacacc-aattggtgggaccccttctcggaccctgcgtatg 45948868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 381
Target Start/End: Complemental strand, 13730776 - 13730666
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||| ||     
T  13730776 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgta 13730677  T
Q  371 caatacaccaa 381  Q
    |||||||||||    
T  13730676 caatacaccaa 13730666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 382
Target Start/End: Original strand, 22609752 - 22609861
Alignment:
Q  272 ccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtcc 371  Q
    ||||||||||||| |||| ||||||||  ||| ||| ||||| ||| ||||||||| |||||||| | |||||||||| ||| | |||||| |||||| |    
T  22609752 ccttggcgcaacggtaaagttgttgtcatgtgactgtaaggtaacgggttcaagtcttggaaacagcctcttgtgtaa-aaacagggtaaggctgcgtac 22609850  T
Q  372 aatacaccaaa 382  Q
    |||||||||||    
T  22609851 aatacaccaaa 22609861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 35417893 - 35417979
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 349  Q
    |||||||||||||||||||||| |||| ||||| ||  ||| |||| |||||||| |||||| ||||||||||| | ||||||||||    
T  35417893 aagggggagccttggcgcaacggtaaagttgttatcatgtgactgagaggtcacgagttcaaatcctggaaacagcctcttgtgtaa 35417979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 414
Target Start/End: Complemental strand, 29366879 - 29366750
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa-aat 384  Q
    |||| ||||||||  ||| || |||||||||| |||||||||||||||||| | |||||| ||| ||| | |||||| |||||| ||||||||||| |||    
T  29366879 taaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgcgtacaatacaccaataat 29366780  T
Q  385 ggcgggagtctttctcagaccctgcgtatg 414  Q
    || ||||  | ||| | |||||||||||||    
T  29366779 ggtgggaccccttcccggaccctgcgtatg 29366750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 53062015 - 53062088
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaaca 336  Q
    |||||||||  |||||||| || |||| ||||||||  ||| ||||||||||||||||||||||||||||||||    
T  53062015 aagggggaggattggcgcatcggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcctggaaaca 53062088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 305 - 414
Target Start/End: Original strand, 516428 - 516539
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacacc--aaaatggcgggagtctttctcag 402  Q
    ||||||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| |||||  ||||| |||  ||||||||||||  | ||| | |    
T  516428 ctgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgcacaataaaccaaaaaatggcgggaccccttccccg 516527  T
Q  403 accctgcgtatg 414  Q
    ||||||||||||    
T  516528 accctgcgtatg 516539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 291 - 383
Target Start/End: Complemental strand, 5173872 - 5173781
Alignment:
Q  291 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 383  Q
    ||||||||  ||| ||||||||||||| |||||||||||||||||||| |||||||||| ||| || |||||  ||| | |||||||||||||    
T  5173872 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaa-aaacaaagtaaggttgcatgcaatacaccaaaa 5173781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 305 - 377
Target Start/End: Original strand, 39212009 - 39212081
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaataca 377  Q
    |||||| |||||| |||||||||||||||| ||| ||||||||||  || ||||||||||||||| |||||||    
T  39212009 ctgaaatgtcacgggttcaagtcctggaaataacctcttgtgtaaataacaaggtaagactgcgtacaataca 39212081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 391
Target Start/End: Original strand, 1217109 - 1217192
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcggga 391  Q
    ||||||||||||| |||||||||||||||||| | |||||||||  ||| | |||||| |||||| ||||||||| |||||||||||    
T  1217109 ctgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgcgtacaatacacc-aaatggcggga 1217192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 382
Target Start/End: Original strand, 29106526 - 29106645
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 362  Q
    |||||||||| ||||||||||| ||||  |||||||  |||||| |||| ||||| || |||||| || ||||||| |||||||||| ||||| | ||||    
T  29106526 aagggggagctttggcgcaacggtaaaaatgttgtcatgtggctcaaagatcacgggtacaagtcttgaaaacaacctcttgtgtaaaaaataggataag 29106625  T
Q  363 actgcgtccaatacaccaaa 382  Q
      | ||| ||||||||||||    
T  29106626 gttacgtacaatacaccaaa 29106645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 10870123 - 10870045
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 349  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | ||||||||||    
T  10870123 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa 10870045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 309 - 379
Target Start/End: Complemental strand, 54032693 - 54032623
Alignment:
Q  309 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacacc 379  Q
    ||||||||| |||||||||||||||||||| |||||||||| ||| | |||||| |||| | |||||||||    
T  54032693 aaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcatacaatacacc 54032623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 286 - 382
Target Start/End: Complemental strand, 22123072 - 22122978
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||||||||||||  ||| |||||||||| || ||||||||||||||||||   |||||||||  ||| | |||||| |||||| ||||||||||||    
T  22123072 taaatttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacagtctcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 22122978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 362
Target Start/End: Complemental strand, 30928285 - 30928228
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 362  Q
    ||||||||||||| |||||||||||||||||| | |||||||||| ||| ||||||||    
T  30928285 ctgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggtaag 30928228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 259 - 368
Target Start/End: Complemental strand, 44403740 - 44403631
Alignment:
Q  259 aataaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataagg 358  Q
    ||||||||||||||||||| |||||| |||| || |||||  |||||| |||||||||  ||| ||||||||| || | | |||||||||| | | ||||    
T  44403740 aataaagggggagccttggtgcaacggtaaagttattgtcacgtggctaaaaggtcacaggttaaagtcctgggaatagcctcttgtgtaaaagacaagg 44403641  T
Q  359 taagactgcg 368  Q
    |||| |||||    
T  44403640 taaggctgcg 44403631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 382
Target Start/End: Complemental strand, 7697057 - 7696948
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| || |||||||||| ||||||||||||||||||   |||||||||  ||| | |||||| ||||||     
T  7697057 ccttggcgcaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagtctcttgtgta--aaacagggtaaggctgcgta 7696960  T
Q  371 caatacaccaaa 382  Q
    ||||||||||||    
T  7696959 caatacaccaaa 7696948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 382
Target Start/End: Original strand, 26869707 - 26869802
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||| ||||||||  ||| ||||||||||||  |||||||||||||||||| | ||| |||||| ||| | |||||| |||||| ||||||||||||    
T  26869707 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctggtgtaa-aaacagggtaaggctgcgtacaatacaccaaa 26869802  T

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Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 291 - 382
Target Start/End: Original strand, 7942995 - 7943086
Alignment:
Q  291 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||  ||| ||| |||||||||  ||||||||||||||||| | |||||| ||| ||| | ||||||||||||| ||||||| ||||    
T  7942995 ttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcatcttgtctaaaaaacagggtaagactgcgtacaatacatcaaa 7943086  T

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Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 307 - 382
Target Start/End: Complemental strand, 12914171 - 12914096
Alignment:
Q  307 gaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||||  |||||||||||||||||| | |||||||||| ||| | |||||| | |||| ||||||||||||    
T  12914171 gaaaggtcacaagttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcggcgtacaatacaccaaa 12914096  T

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Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 280 - 379
Target Start/End: Original strand, 19730996 - 19731095
Alignment:
Q  280 caacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacacc 379  Q
    ||||| |||||||||||||  |||  ||||||||||||  | ||||||||||||| | | |||||||||| ||| ||||||||  ||||| |||||||||    
T  19730996 caacggtaaatttgttgtcacgtgattgaaaggtcacggatgcaagtcctggaaatagcctcttgtgtaaaaaacaaggtaaggttgcgtacaatacacc 19731095  T

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Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 381
Target Start/End: Original strand, 14986990 - 14987052
Alignment:
Q  319 gttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 381  Q
    |||||||||||||||||| | |||||||||| ||| | |||||| |||||| |||||||||||    
T  14986990 gttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa 14987052  T

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Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 383
Target Start/End: Complemental strand, 45139616 - 45139538
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 383  Q
    ||||||||||||| ||||||||  |||||||||| |||||||||| | | | |||||| |||| | |||||||||||||    
T  45139616 ctgaaaggtcacgggttcaagttttggaaacaacctcttgtgtaaaacacagggtaaggctgcatacaatacaccaaaa 45139538  T

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Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 314 - 383
Target Start/End: Complemental strand, 10795554 - 10795485
Alignment:
Q  314 cacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 383  Q
    |||| |||||||||||||||||| | |||||||||| | | | |||||| |||||| |||||||||||||    
T  10795554 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaa 10795485  T

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Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 272 - 348
Target Start/End: Complemental strand, 52926382 - 52926305
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgta 348  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||||||    
T  52926382 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgta 52926305  T

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Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 382
Target Start/End: Complemental strand, 4495821 - 4495725
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||| ||||||||  ||| ||| ||||||||| |||||||||||| ||| | | | |||||||| ||| | |||||| |||||| ||||||||||||    
T  4495821 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctgaaaatagcctattgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa 4495725  T

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Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 391
Target Start/End: Original strand, 55401209 - 55401281
Alignment:
Q  319 gttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcggga 391  Q
    |||||||||||| ||||| | |||||||||| ||| | | |||||||||||  ||||||||||||||| ||||    
T  55401209 gttcaagtcctgtaaacagcctcttgtgtaaaaaacaggttaagactgcgtataatacaccaaaatggtggga 55401281  T

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Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 381
Target Start/End: Original strand, 9607203 - 9607298
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 381  Q
    |||| ||||||||  ||| |||||||||||   |||||||||||||||||| | ||||| |||| ||| | |||||| ||||||  ||||||||||    
T  9607203 taaagttgttgtcatgtgactgaaaggtcatcggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaaggctgcgtagaatacaccaa 9607298  T

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Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 391
Target Start/End: Original strand, 33926102 - 33926187
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcggga 391  Q
    ||||||||||| | |||||||||||||||| | | |||||||||| ||| | |||||| ||| || |||||||||| ||||| ||||    
T  33926102 ctgaaaggtcatgggttcaagtcctggaaatagcctcttgtgtaa-aaacagggtaaggctgtgtacaatacaccataatggtggga 33926187  T

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Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 382
Target Start/End: Original strand, 39203516 - 39203610
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||| ||||||||  ||| ||||||||||||  ||||||||||| |||||| | |||||||||  ||| | ||||||  ||||| ||||||||||||    
T  39203516 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtccttgaaacagcctcttgtgta--aaacagggtaaggttgcgtacaatacaccaaa 39203610  T

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Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 319 - 382
Target Start/End: Original strand, 31592882 - 31592943
Alignment:
Q  319 gttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||||||||||||||||| | |||||||||  ||| | |||||| |||||| ||||||||||||    
T  31592882 gttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 31592943  T

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Target: chr1 (Bit Score: 65; Significance: 3e-28; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 263 - 391
Target Start/End: Complemental strand, 2435967 - 2435839
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 362  Q
    ||||||| |||||||||||||| |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | || ||||| | ||||| ||||||    
T  2435967 aagggggggccttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtgaaaaatagggtaag 2435868  T
Q  363 actgcgtccaatacaccaaaatggcggga 391  Q
     |||||| |||||||||||||||| ||||    
T  2435867 cctgcgtacaatacaccaaaatggtggga 2435839  T

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Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 382
Target Start/End: Complemental strand, 18724720 - 18724606
Alignment:
Q  268 ggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgc 367  Q
    |||| |||||||||||| |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| |||     
T  18724720 ggagacttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgt 18724621  T
Q  368 gtccaatacaccaaa 382  Q
    || ||||||||||||    
T  18724620 gtacaatacaccaaa 18724606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 263 - 384
Target Start/End: Complemental strand, 17470526 - 17470405
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 362  Q
    ||||||||||||||| |||||| |||| ||||||||  ||| ||||| ||||| | ||||||||||| |||||| | |||||||||| ||| | ||||||    
T  17470526 aagggggagccttggtgcaacggtaaagttgttgtcacgtgactgaatggtcatgggttcaagtcctagaaacagcctcttgtgtaaaaaacagggtaag 17470427  T
Q  363 actgcgtccaatacaccaaaat 384  Q
     |||||| ||||||||||||||    
T  17470426 gctgcgtacaatacaccaaaat 17470405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 263 - 386
Target Start/End: Original strand, 22327077 - 22327200
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 362  Q
    |||| |||||||||||||||||  ||| ||||||||  ||| |||||||||| || |||||||||||||||||||| |||||||||| ||| | ||||||    
T  22327077 aaggtggagccttggcgcaacggcaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaag 22327176  T
Q  363 actgcgtccaatacaccaaaatgg 386  Q
     ||| || | || |||||||||||    
T  22327177 gctgtgtacgatgcaccaaaatgg 22327200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 266 - 386
Target Start/End: Original strand, 50811920 - 50812041
Alignment:
Q  266 ggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaagac 364  Q
    ||||||||||||||||||| |||| ||||||||  ||| |||||||||||||   ||| |||||||||||| |||||||||| || ||| | ||||||      
T  50811920 ggggagccttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacggaatcatgtcctggaaacagcttcttgtgtaaaaaaacagggtaaggt 50812019  T
Q  365 tgcgtccaatacaccaaaatgg 386  Q
    ||||| ||||||||||||||||    
T  50812020 tgcgtacaatacaccaaaatgg 50812041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 263 - 355
Target Start/End: Complemental strand, 2436073 - 2435981
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaata 355  Q
    ||||||| ||||||| |||||| |||| ||||||||  ||| ||||||||||||| |||||||||||||||||||| || ||||||| |||||    
T  2436073 aagggggggccttggtgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcctgtgtaaaaaata 2435981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 291 - 383
Target Start/End: Original strand, 9939467 - 9939559
Alignment:
Q  291 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 383  Q
    ||||||||  ||| ||||||||||||| |||||||||||||||||||| |||||| ||||||| | ||||||  ||||| |||||||||||||    
T  9939467 ttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtttaagaaacatggtaaggttgcgtgcaatacaccaaaa 9939559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 306 - 414
Target Start/End: Complemental strand, 45264537 - 45264429
Alignment:
Q  306 tgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcgggagtctttctcagacc 405  Q
    ||||||||||| ||||||||||||||||||||| ||||||| || ||| |  ||||| ||| || |||||||||||||||| ||||  | ||||||||||    
T  45264537 tgaaaggtcacatgttcaagtcctggaaacaacctcttgtgcaaaaaacagagtaaggctgtgtgcaatacaccaaaatggtgggaccccttctcagacc 45264438  T
Q  406 ctgcgtatg 414  Q
    |||| ||||    
T  45264437 ctgcatatg 45264429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 272 - 382
Target Start/End: Original strand, 14617024 - 14617135
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | ||||||||||  || ||||||||  |||||     
T  14617024 ccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacagcctcttgtgtaaataacaaggtaaggttgcgta 14617123  T
Q  371 caatacaccaaa 382  Q
    ||||||||||||    
T  14617124 caatacaccaaa 14617135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 273 - 382
Target Start/End: Original strand, 20036208 - 20036318
Alignment:
Q  273 cttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaagactgcgtcc 371  Q
    |||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||||  |||||||| |||| | | ||||||| ||||| |    
T  20036208 cttggcgcaatggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaaactcttgtgtaaagagaaagggtaagattgcgttc 20036307  T
Q  372 aatacaccaaa 382  Q
    |||||||||||    
T  20036308 aatacaccaaa 20036318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 382
Target Start/End: Complemental strand, 44485288 - 44485170
Alignment:
Q  264 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 363  Q
    ||||||||||||||||||||  |||| ||||||||  |||  |||||||||||| |||  |||||||||||||||  ||||||||| | | | ||||||     
T  44485288 agggggagccttggcgcaacagtaaagttgttgtcatgtgattgaaaggtcacgggttatagtcctggaaacaaccacttgtgtaaaagacatggtaagg 44485189  T
Q  364 ctgcgtccaatacaccaaa 382  Q
    |||||| ||||||||||||    
T  44485188 ctgcgtacaatacaccaaa 44485170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 286 - 383
Target Start/End: Original strand, 27201648 - 27201745
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 383  Q
    |||| ||||||||  ||| ||||||||||| | |||||||||||||||||| | |||||||| ||||| | |||||| |||||| |||||||||||||    
T  27201648 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtcagaaacagggtaaggctgcgtacaatacaccaaaa 27201745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 381
Target Start/End: Original strand, 10668245 - 10668321
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 381  Q
    ||||||||||||| |||||||||||||||||| | |||||||||| ||| ||||||||  ||||| |||||||||||    
T  10668245 ctgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggtaaggttgcgtacaatacaccaa 10668321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 15511329 - 15511206
Alignment:
Q  265 gggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagac 364  Q
    |||||||||||||||||| | |||| |||||||   |||||||||||||||| | || |||||||||||||  | |||||||||| ||| | |||||| |    
T  15511329 gggggagccttggcgcaatggtaaagttgttgtaatgtggctgaaaggtcacatattgaagtcctggaaaccgcctcttgtgtaaaaaacagggtaaggc 15511230  T
Q  365 tgcg--tccaatacaccaaaatgg 386  Q
    ||||  | ||||||||||||||||    
T  15511229 tgcggatacaatacaccaaaatgg 15511206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 414
Target Start/End: Original strand, 18944629 - 18944773
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||  ||||||| |||||||||| | |||||||||| ||| | |||||| ||||||     
T  18944629 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaaggcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 18944728  T
Q  371 caatacaccaa-aatggcgggagtctttctcagaccctgcgtatg 414  Q
    ||||||||||| ||||| ||||  | ||| | |||||||||||||    
T  18944729 caatacaccaacaatggtgggaccccttcccggaccctgcgtatg 18944773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 382
Target Start/End: Complemental strand, 46248110 - 46248014
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||| ||||||||  ||| |||||| |||||| ||||||||| |||||||| | |||||||||| ||| | ||||||||||||| ||||||||||||    
T  46248110 taaagttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaa 46248014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 286 - 381
Target Start/End: Complemental strand, 20004249 - 20004154
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 381  Q
    |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | ||| |||||| ||| |||||||| |||||| |||||||||||    
T  20004249 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctctcgtgtaaaaaacaaggtaaggctgcgtacaatacaccaa 20004154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 272 - 382
Target Start/End: Complemental strand, 32632728 - 32632618
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||   || ||||||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||||||     
T  32632728 ccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa-aaacagggtaaggctgcgta 32632630  T
Q  371 caatacaccaaa 382  Q
    ||||||||||||    
T  32632629 caatacaccaaa 32632618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 269 - 391
Target Start/End: Complemental strand, 27136826 - 27136704
Alignment:
Q  269 gagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcg 368  Q
    |||||||||| ||||| |||| ||||||||  |||  || |||| |||| |||||||| |||| |||||| |||||||||| ||| | ||||||  ||||    
T  27136826 gagccttggcacaacggtaaagttgttgtcacgtgattggaaggacacgagttcaagttctgggaacaacctcttgtgtaaaaaacatggtaaggttgcg 27136727  T
Q  369 tccaatacaccaaaatggcggga 391  Q
    | |||||||||||||||| ||||    
T  27136726 tacaatacaccaaaatggtggga 27136704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 381
Target Start/End: Complemental strand, 30395900 - 30395790
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||  ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||||||     
T  30395900 ccttggcgcaactggtaaagttgttgtcatgtgactttaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 30395801  T
Q  371 caatacaccaa 381  Q
    |||||||||||    
T  30395800 caatacaccaa 30395790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 348
Target Start/End: Complemental strand, 25554902 - 25554817
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgta 348  Q
    |||| ||||||||||||||| | |||| ||||||||  ||| || ||||| |||||||| |||||||||||||||| |||||||||    
T  25554902 aaggaggagccttggcgcaatggtaaagttgttgtcacgtgactaaaaggccacgtgtttaagtcctggaaacaacctcttgtgta 25554817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 379
Target Start/End: Original strand, 46991805 - 46991898
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacacc 379  Q
    |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||||| |||||||||| ||| | |||||| ||| || |||||||||    
T  46991805 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgtgtacaatacacc 46991898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 286 - 414
Target Start/End: Complemental strand, 23768477 - 23768350
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatg 385  Q
    |||| ||||||||  ||| ||| ||||||||  ||||||||| |||||||| | |||||||||| ||| | |||||| |||||| ||||||||| |||||    
T  23768477 taaagttgttgtcatgtgactgtaaggtcacaggttcaagtcatggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacacc-aaatg 23768379  T
Q  386 gcgggagtctttctcagaccctgcgtatg 414  Q
    | ||||  | ||| |||||||||||||||    
T  23768378 gtgggacaccttcccagaccctgcgtatg 23768350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 272 - 378
Target Start/End: Complemental strand, 34725268 - 34725163
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||  ||| | |||||| ||||||     
T  34725268 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgcgta 34725171  T
Q  371 caatacac 378  Q
    ||||||||    
T  34725170 caatacac 34725163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 257 - 381
Target Start/End: Complemental strand, 50760412 - 50760288
Alignment:
Q  257 ataataaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataa 356  Q
    |||||||| ||||||||||||||||| | |||| | ||||||  ||| |||| |||||||| |||||||||||| ||||| | |||||||||  |||       
T  50760412 ataataaaaggggagccttggcgcaaaggtaaagtagttgtcatgtgactgagaggtcacgggttcaagtcctgaaaacagcctcttgtgtataaaactg 50760313  T
Q  357 ggtaagactgcgtccaatacaccaa 381  Q
    |||||| ||||||  ||||||||||    
T  50760312 ggtaaggctgcgtataatacaccaa 50760288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 382
Target Start/End: Complemental strand, 34679399 - 34679280
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 362  Q
    |||||||||| ||||||||||| |||| || |||||  ||| ||||||  |||| ||||| | |||| |||||||| |||||||||| ||| | ||||||    
T  34679399 aagggggagctttggcgcaacggtaaagttattgtcatgtgactgaaatatcacatgttccattcctagaaacaacctcttgtgtaaaaaacagggtaag 34679300  T
Q  363 actgcgtccaatacaccaaa 382  Q
    ||||||| | ||||| ||||    
T  34679299 actgcgtactatacatcaaa 34679280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 386
Target Start/End: Original strand, 19701549 - 19701671
Alignment:
Q  264 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 363  Q
    ||||||||||||||||||||  |||| ||||||||  ||| |||||| |||||| ||| ||||| || ||||| | |||||||||| |||   ||||||     
T  19701549 agggggagccttggcgcaacagtaaagttgttgtcgtgtgactgaaatgtcacgggtttaagtcatgaaaacagcctcttgtgtaaaaaacttggtaagg 19701648  T
Q  364 ctgcgtccaatacaccaaaatgg 386  Q
     || || ||||||||||||||||    
T  19701649 atgggtacaatacaccaaaatgg 19701671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 281 - 383
Target Start/End: Complemental strand, 35117930 - 35117828
Alignment:
Q  281 aacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacacca 380  Q
    |||| |||| ||||||||  ||| ||||||||||||| |||||||||||||||| | | |||||||||| | | | |||||| ||| || ||||||||||    
T  35117930 aacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaatacagggtaaggctgtgtacaatacacca 35117831  T
Q  381 aaa 383  Q
    |||    
T  35117830 aaa 35117828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 286 - 379
Target Start/End: Original strand, 6925101 - 6925194
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacacc 379  Q
    |||| ||||||||  ||| ||| ||||||||| |||||||||||||||| | | |||||||||| ||||| |||||| |||||  |||||||||    
T  6925101 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaatagggtaaggctgcggacaatacacc 6925194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 6983989 - 6983916
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaaca 336  Q
    ||||| |||||||||||||| | |||| ||||||||  ||| ||||||||||||  ||||||||||||||||||    
T  6983989 aagggagagccttggcgcaatggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaaca 6983916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 382
Target Start/End: Original strand, 11596501 - 11596609
Alignment:
Q  273 cttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtcca 372  Q
    |||||||||||| |||| | | ||||  ||| |||||| |||||| ||||||||||| |||||||| |||||||||| ||| | |||||| ||||||  |    
T  11596501 cttggcgcaacggtaaagtggctgtcatgtgactgaaatgtcacgggttcaagtcctagaaacaacctcttgtgtaa-aaacagggtaaggctgcgtata 11596599  T
Q  373 atacaccaaa 382  Q
    ||||||||||    
T  11596600 atacaccaaa 11596609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 286 - 382
Target Start/End: Complemental strand, 38478437 - 38478343
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||| ||||||||  ||| ||||||||||||| ||||||||||| |||||| | |||||||||  ||| | |||||| |||||| ||||||||||||    
T  38478437 taaacttgttgtcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 38478343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 25468400 - 25468324
Alignment:
Q  306 tgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||||||||| | |||||||||||||||||||| |||||||||| ||  | ||||||  ||||| ||||||||||||    
T  25468400 tgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaatcagggtaaggttgcgtacaatacaccaaa 25468324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 382
Target Start/End: Complemental strand, 41319963 - 41319867
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||| ||||||||  ||| ||||||||||||  ||| ||||||||||||||   |||||||||| ||| | |||||| |||||| ||||||||||||    
T  41319963 taaagttgttgtcatgtgactgaaaggtcacaggtttaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa 41319867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 263 - 334
Target Start/End: Complemental strand, 10378905 - 10378834
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaa 334  Q
    |||||| |||||||| |||||| |||| ||||||||  ||| ||||||||| ||| ||||||||||||||||    
T  10378905 aaggggaagccttggtgcaacggtaaagttgttgtcacgtgactgaaaggttacgggttcaagtcctggaaa 10378834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 383
Target Start/End: Original strand, 35005143 - 35005221
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 383  Q
    ||||||||||||| ||||||||| || ||||| | |||||||||| ||| | |||||| |||| | |||||||||||||    
T  35005143 ctgaaaggtcacgggttcaagtcttgaaaacagcctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaaaa 35005221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 12126972 - 12126898
Alignment:
Q  306 tgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||||||||||| ||| |||| ||||||||| |||||||||||  ||| | |||||| |||||| ||||||||||||    
T  12126972 tgaaaggtcacgggtttaagttctggaaacagcttcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 12126898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 272 - 336
Target Start/End: Original strand, 25290149 - 25290214
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaaca 336  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||||||||||||| ||||||||    
T  25290149 ccttggcgcaacaggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcttggaaaca 25290214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 382
Target Start/End: Complemental strand, 4430183 - 4430087
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||| ||||||||  ||| ||| ||||||||| ||| ||||| || |||||   |||||||||| ||| | ||||||||||||| ||||||||||||    
T  4430183 taaagttgttgtcatgtgactggaaggtcacgggtttaagtcttgaaaacagtatcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaa 4430087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 31272512 - 31272468
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 349  Q
    ||||||||||||  |||||||||||||||||||| ||||||||||    
T  31272512 ctgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaa 31272468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 52910196 - 52910268
Alignment:
Q  264 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaaca 336  Q
    |||||||||||||| |||||| |||| ||||||||  ||| ||||||||||||  |||||| || ||||||||    
T  52910196 agggggagccttggtgcaacggtaaagttgttgtcatgtgactgaaaggtcacaggttcaactcttggaaaca 52910268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 349
Target Start/End: Complemental strand, 22930252 - 22930161
Alignment:
Q  259 aataaagggggagccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 349  Q
    |||| ||||| | |||||||||||| | |||| ||||||||  ||| ||||||||||| | |||||||||||||||||| | | ||||||||    
T  22930252 aatagaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagccttttgtgtaa 22930161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 391
Target Start/End: Original strand, 33222971 - 33223089
Alignment:
Q  273 cttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtcc 371  Q
    ||||||||||| | |||| ||||||||  ||| |||||||||||||  || ||||| |||||||| | |||||||||| ||| | || |||  ||||| |    
T  33222971 cttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacggatttaagtcatggaaacagcctcttgtgtaa-aaacagggaaaggttgcgtac 33223069  T
Q  372 aatacaccaaaatggcggga 391  Q
    ||||||||||||||| ||||    
T  33223070 aatacaccaaaatggtggga 33223089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 345
Target Start/End: Original strand, 35019215 - 35019290
Alignment:
Q  270 agccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgt 345  Q
    ||||||||||||||| |||| ||||||||   || ||||||||||||   ||||||||||| ||||||| ||||||    
T  35019215 agccttggcgcaacggtaaagttgttgtcacatgactgaaaggtcacagattcaagtcctgtaaacaacctcttgt 35019290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 336
Target Start/End: Original strand, 47214499 - 47214562
Alignment:
Q  274 ttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaaca 336  Q
    |||||||||| | |||| ||||||||  ||| ||||||||||||| ||||||||||||||||||    
T  47214499 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 47214562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 263 - 337
Target Start/End: Original strand, 6358112 - 6358186
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaa 337  Q
    |||||||||||||||||||||| |||||||||| ||   || ||||||||||||  |||||| || ||| |||||    
T  6358112 aagggggagccttggcgcaacggtaaatttgttttcacatgactgaaaggtcacaggttcaaatcttgggaacaa 6358186  T

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Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 336
Target Start/End: Original strand, 23371105 - 23371175
Alignment:
Q  266 ggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaaca 336  Q
    ||||||||||||||||||  |||| ||||| ||   || ||||||||||||| ||||||||||| ||||||    
T  23371105 ggggagccttggcgcaacagtaaagttgttttcgcatgactgaaaggtcacgggttcaagtcctagaaaca 23371175  T

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Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 382
Target Start/End: Complemental strand, 35253323 - 35253248
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||| ||||| ||||||||||| |||||| | |||||||||  ||| | |||||| |||||| ||||||||||||    
T  35253323 ctgaaagatcacgggttcaagtcctcgaaacagcctcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 35253248  T

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Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 383
Target Start/End: Complemental strand, 19932924 - 19932815
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||| | ||||||||  |||| ||||| | |||||||| ||| | |||||| ||||||     
T  19932924 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagt--tggatacaacct-ttgtgtaaaaaacagggtaaggctgcgta 19932828  T
Q  371 caatacaccaaaa 383  Q
    |||||||||||||    
T  19932827 caatacaccaaaa 19932815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 414
Target Start/End: Original strand, 46859138 - 46859195
Alignment:
Q  357 ggtaagactgcgtccaatacaccaaaatggcgggagtctttctcagaccctgcgtatg 414  Q
    ||||||||||||| |||||||||||||||| |||| || || |||| || ||||||||    
T  46859138 ggtaagactgcgtacaatacaccaaaatggtgggactcattttcaggccttgcgtatg 46859195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 272 - 382
Target Start/End: Complemental strand, 45812707 - 45812598
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||  |||||||||||| |||||   |||||||||  ||| | |||||| |||| |     
T  45812707 ccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacagtctcttgtgta--aaagagggtaaggctgcata 45812610  T
Q  371 caatacaccaaa 382  Q
    ||||||||||||    
T  45812609 caatacaccaaa 45812598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 2e-26; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 262 - 383
Target Start/End: Complemental strand, 44781687 - 44781566
Alignment:
Q  262 aaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaa 361  Q
    ||||||||||||||||||||||| |||| ||||||||  ||| ||||||| ||||| |||||||||||||||||||| |||||||||| | | | |||||    
T  44781687 aaagggggagccttggcgcaacggtaaagttgttgtcacgtgactgaaagttcacgggttcaagtcctggaaacaacctcttgtgtaaaagacagggtaa 44781588  T
Q  362 gactgcgtccaatacaccaaaa 383  Q
    | ||| || |||||||||||||    
T  44781587 ggctgtgtacaatacaccaaaa 44781566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 263 - 391
Target Start/End: Complemental strand, 42083879 - 42083751
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 362  Q
    ||||| |||||||||||||||| |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | | |||||||| ||||  || |||    
T  42083879 aagggagagccttggcgcaacggtaaaattgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatggggcaag 42083780  T
Q  363 actgcgtccaatacaccaaaatggcggga 391  Q
     |||||| || || |||||||||| ||||    
T  42083779 gctgcgtacagtataccaaaatggtggga 42083751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 263 - 391
Target Start/End: Original strand, 35105884 - 35106006
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 362  Q
    |||||||||||||||||||| |      ||||||||  ||||||||||||||||| |||||||||||||||||||| |||||||||| | | |  |||||    
T  35105884 aagggggagccttggcgcaaag------ttgttgtcacgtggctgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaagagagtgtaag 35105977  T
Q  363 actgcgtccaatacaccaaaatggcggga 391  Q
     |||||| |||||||||| ||||| ||||    
T  35105978 gctgcgtacaatacaccagaatggtggga 35106006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 262 - 391
Target Start/End: Complemental strand, 14018150 - 14018021
Alignment:
Q  262 aaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaa 361  Q
    ||||||||||||||||||||||| |||  ||||||||  |||  |||||||||| | ||||||||| ||||||||   |||||||||| ||| | ||| |    
T  14018150 aaagggggagccttggcgcaacggtaatgttgttgtcacgtgattgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaaaacagggtga 14018051  T
Q  362 gactgcgtccaatacaccaaaatggcggga 391  Q
    |||||||| |||||||| ||| ||| ||||    
T  14018050 gactgcgtacaatacactaaattggtggga 14018021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 382
Target Start/End: Complemental strand, 12670420 - 12670311
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||  ||| | |||||| ||||||     
T  12670420 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgcgta 12670323  T
Q  371 caatacaccaaa 382  Q
    ||||||||||||    
T  12670322 caatacaccaaa 12670311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 382
Target Start/End: Complemental strand, 30454267 - 30454158
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||  ||| |||||||| ||||||     
T  30454267 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacaaggtaaggctgcgta 30454170  T
Q  371 caatacaccaaa 382  Q
    | ||||||||||    
T  30454169 cgatacaccaaa 30454158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 382
Target Start/End: Original strand, 36720774 - 36720870
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| |||||| ||||||||||||    
T  36720774 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa 36720870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 263 - 391
Target Start/End: Complemental strand, 44742699 - 44742571
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 362  Q
    |||||||| |||||| |||||| |||| ||||||||  |||  || ||||||| | |||||||| ||||||||||  || ||||||| ||| | ||||||    
T  44742699 aagggggaaccttggtgcaacggtaaagttgttgtcgcgtgattgtaaggtcatgagttcaagttctggaaacaatctcctgtgtaaaaaacagggtaag 44742600  T
Q  363 actgcgtccaatacaccaaaatggcggga 391  Q
     |||||| |||||||||||||||| ||||    
T  44742599 gctgcgtacaatacaccaaaatggtggga 44742571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 272 - 382
Target Start/End: Complemental strand, 29521857 - 29521746
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||| ||| ||| | |||||| ||||||     
T  29521857 ccttggcgcaactgataaagttgttgtcgtgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtttaaaaaacagggtaaggctgcgta 29521758  T
Q  371 caatacaccaaa 382  Q
    ||||||||||||    
T  29521757 caatacaccaaa 29521746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 381
Target Start/End: Complemental strand, 7136701 - 7136591
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||| | |||||||||||||||||||| |||||||||| ||  | |||||| ||||||     
T  7136701 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaccagggtaaggctgcgta 7136602  T
Q  371 caatacaccaa 381  Q
    |||||||||||    
T  7136601 caatacaccaa 7136591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 381
Target Start/End: Complemental strand, 39461168 - 39461058
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  | | ||||||||||||| |||||||||||||||||| | |||||||||| ||| |  ||||| ||||||     
T  39461168 ccttggcgcaactggtaaagttgttgtcatgagactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgcgta 39461069  T
Q  371 caatacaccaa 381  Q
    |||||||||||    
T  39461068 caatacaccaa 39461058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 382
Target Start/End: Original strand, 2626497 - 2626596
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataa---ggtaagactgcgtccaatacaccaaa 382  Q
    |||| ||||||||  ||| | ||||||||||| |||||||||||||||||| | |||||||||| ||| ||   ||||||||||||| ||||||||||||    
T  2626497 taaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaaaacagggtaagactgcgtacaatacaccaaa 2626596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 379
Target Start/End: Complemental strand, 28817783 - 28817690
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacacc 379  Q
    |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| |||||| |||||||||    
T  28817783 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacacc 28817690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 382
Target Start/End: Original strand, 44530150 - 44530223
Alignment:
Q  309 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||| ||||||||| |||||||||| |||||||||| ||| | |||||| |||||| ||||||||||||    
T  44530150 aaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa 44530223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 286 - 414
Target Start/End: Complemental strand, 20284230 - 20284099
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataa--ggtaagactgcgtccaatacaccaa-a 382  Q
    |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||| ||| ||| ||  |||||| |||||| ||||||||||| |    
T  20284230 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaagggtaaggctgcgtacaatacaccaata 20284131  T
Q  383 atggcgggagtctttctcagaccctgcgtatg 414  Q
    |||| ||||  | ||| | |||||||||||||    
T  20284130 atggtgggaccccttcccggaccctgcgtatg 20284099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 269 - 369
Target Start/End: Complemental strand, 30962947 - 30962847
Alignment:
Q  269 gagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcg 368  Q
    ||||||||||||||||  ||| ||||||||  |||  ||||||||||||  ||||||||||||||||| | |||||||||| ||||| ||| || |||||    
T  30962947 gagccttggcgcaacggaaaagttgttgtcatgtgattgaaaggtcacgacttcaagtcctggaaacagcctcttgtgtaaaaaatagggttaggctgcg 30962848  T
Q  369 t 369  Q
    |    
T  30962847 t 30962847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 382
Target Start/End: Complemental strand, 18164911 - 18164821
Alignment:
Q  291 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||| ||| | ||||||  ||||| ||||||||||||    
T  18164911 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa-aaacagggtaaggttgcgtacaatacaccaaa 18164821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 381
Target Start/End: Complemental strand, 20869668 - 20869560
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||  ||| | |||||| ||| ||     
T  20869668 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgtgta 20869571  T
Q  371 caatacaccaa 381  Q
    |||||||||||    
T  20869570 caatacaccaa 20869560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 381
Target Start/End: Original strand, 25250500 - 25250595
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 381  Q
    |||| ||||||||  ||| ||| |||||||| ||||||||||||||||||| | | |||||||| ||||| |||| | |||||| |||||||||||    
T  25250500 taaagttgttgtcatgtgactggaaggtcacatgttcaagtcctggaaacagcctattgtgtaaaaaatagggtatggctgcgtacaatacaccaa 25250595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 382
Target Start/End: Original strand, 31457156 - 31457246
Alignment:
Q  291 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||  ||||||||||||||||| |||||||||||| ||||||| |||||||||| ||||| |  ||| |||||| ||||||| ||||    
T  31457156 ttgttgtcatgtggctgaaaggtcacgggttcaagtcctgtaaacaacctcttgtgtaa-aaataggaaaaggctgcgtacaatacatcaaa 31457246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 273 - 382
Target Start/End: Original strand, 17823540 - 17823650
Alignment:
Q  273 cttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtcc 371  Q
    ||||||||||| | |||| ||||||||  ||| | ||||||||||| |||||||||||||||||| | |||||||||| ||  | | |||||||||||      
T  17823540 cttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaccaggataagactgcgtaa 17823639  T
Q  372 aatacaccaaa 382  Q
    |||||||||||    
T  17823640 aatacaccaaa 17823650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 286 - 414
Target Start/End: Complemental strand, 21070859 - 21070727
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataa---ggtaagactgcgtccaatacaccaa- 381  Q
    |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||| ||| ||| ||   |||||| |||||| |||||||||||     
T  21070859 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaaagggtaaggctgcgtacaatacaccaat 21070760  T
Q  382 aatggcgggagtctttctcagaccctgcgtatg 414  Q
    ||||| ||||  | ||| | |||||||||||||    
T  21070759 aatggtgggaccccttcccggaccctgcgtatg 21070727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 279 - 381
Target Start/End: Original strand, 22598128 - 22598230
Alignment:
Q  279 gcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacac 378  Q
    |||||| |||| ||||||||   || ||||||||||||| |||||| ||||||||||||| |||||||||| ||| | |||||| ||  || ||||||||    
T  22598128 gcaacggtaaagttgttgtcacatgactgaaaggtcacgggttcaaatcctggaaacaacctcttgtgtaaaaaacagggtaaggctatgtacaatacac 22598227  T
Q  379 caa 381  Q
    |||    
T  22598228 caa 22598230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 309 - 382
Target Start/End: Complemental strand, 8897898 - 8897825
Alignment:
Q  309 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||| ||| ||||||||||||||||  ||||||||| ||||| |||||| || ||| ||||||||||||    
T  8897898 aaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtacaatacaccaaa 8897825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 382
Target Start/End: Original strand, 36918121 - 36918198
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||||||||||| ||||||||| |||||||||| ||||| ||||| ||| | |||||| ||| || ||||||||||||    
T  36918121 ctgaaaggtcacatgttcaagttctggaaacaatttcttatgtaaaaaacagggtaaggctgtgtacaatacaccaaa 36918198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 381
Target Start/End: Original strand, 6760823 - 6760895
Alignment:
Q  309 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 381  Q
    ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| || ||| |||||||||||    
T  6760823 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcttcgtacaatacaccaa 6760895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 381
Target Start/End: Complemental strand, 8484112 - 8484000
Alignment:
Q  269 gagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcg 368  Q
    |||||||||||||||| ||||   |||| |  ||| || ||| |||| | |||||||||||||||||||| |||||||||| ||| | || ||| |||||    
T  8484112 gagccttggcgcaacggtaaagcggttgccacgtgacttaaatgtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggcaaggctgcg 8484013  T
Q  369 tccaatacaccaa 381  Q
    | |||||||||||    
T  8484012 tacaatacaccaa 8484000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 382
Target Start/End: Original strand, 13160680 - 13160775
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||| ||||||||  ||| ||| ||||||||| ||||||||||| |||||| | |||||||||| ||| | |||||| |||||| ||||||||||||    
T  13160680 taaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcttgtgtaa-aaacagggtaaggctgcgtacaatacaccaaa 13160775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 349
Target Start/End: Original strand, 28407378 - 28407457
Alignment:
Q  271 gccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 349  Q
    ||||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | ||||||||||    
T  28407378 gccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa 28407457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 272 - 382
Target Start/End: Original strand, 35261642 - 35261753
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| ||||||| ||||||||||   |||||||||| ||| | ||||||  |||||     
T  35261642 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagccctggaaacagtctcttgtgtaaaaaacagggtaaggttgcgta 35261741  T
Q  371 caatacaccaaa 382  Q
    ||||||||||||    
T  35261742 caatacaccaaa 35261753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 310 - 382
Target Start/End: Original strand, 12625891 - 12625964
Alignment:
Q  310 aggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||||||| | |||||||||||||||||| |||||||| || ||| | ||||||||||| | ||||||||||||    
T  12625891 aggtcacgggctcaagtcctggaaacaacctcttgtgtaaaaaaacagggtaagactgcatacaatacaccaaa 12625964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 309 - 381
Target Start/End: Original strand, 26954133 - 26954206
Alignment:
Q  309 aaggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaagactgcgtccaatacaccaa 381  Q
    ||||||||| |||||||||||||||||| | |||||||| || ||| | |||||| |||||| |||||||||||    
T  26954133 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaacagggtaaggctgcgtacaatacaccaa 26954206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 309 - 382
Target Start/End: Original strand, 45071266 - 45071338
Alignment:
Q  309 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||| |||||||| ||||||||| | |||||||||| ||| | |||||| |||||| ||||||||||||    
T  45071266 aaggtcacgggttcaagttctggaaacagcctcttgtgtaa-aaacagggtaaggctgcgtacaatacaccaaa 45071338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 314 - 382
Target Start/End: Complemental strand, 5135418 - 5135350
Alignment:
Q  314 cacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||| |||||||||||||||||| | |||||||||| ||| | |||||| ||| || ||||||||||||    
T  5135418 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaagagggtaaggctgtgtacaatacaccaaa 5135350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 382
Target Start/End: Original strand, 389642 - 389719
Alignment:
Q  307 gaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt--aagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||||| |||||||||||||||||| | ||||||||  || ||| | ||||||  ||||| ||||||||||||    
T  389642 gaaaggtcacgggttcaagtcctggaaacaccctcttgtgtcaaaaaaacagggtaaggttgcgtacaatacaccaaa 389719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 24245429 - 24245478
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaac 335  Q
    |||| ||||||||  ||| ||||||||||||| |||||||||||||||||    
T  24245429 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaac 24245478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 2e-23; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 263 - 391
Target Start/End: Complemental strand, 487315 - 487187
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 362  Q
    |||| |||||||||||| |||| |||| ||||||||  ||| ||||||||||||| ||||||||| |||||||||| |||||||||  ||| |||||||     
T  487315 aaggaggagccttggcgtaacggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtataaaacaaggtaaa 487216  T
Q  363 actgcgtccaatacaccaaaatggcggga 391  Q
     |||||| |||||||| ||||||| ||||    
T  487215 gctgcgtacaatacactaaaatggtggga 487187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 264 - 381
Target Start/End: Original strand, 19027804 - 19027921
Alignment:
Q  264 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 363  Q
    |||||||| |||| ||||| | || | ||||||||  ||| ||||||||||||| |||||||||||||||||||| |||||||||| ||| | ||||||     
T  19027804 agggggagtcttgacgcaatggtagagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaagg 19027903  T
Q  364 ctgcgtccaatacaccaa 381  Q
    |||||| |||||||||||    
T  19027904 ctgcgtacaatacaccaa 19027921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 272 - 381
Target Start/End: Complemental strand, 16408775 - 16408665
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||||||||||     
T  16408775 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagactgcgta 16408676  T
Q  371 caatacaccaa 381  Q
    |||||||||||    
T  16408675 caatacaccaa 16408665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 261 - 391
Target Start/End: Original strand, 54175017 - 54175146
Alignment:
Q  261 taaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctgg-aaacaacttcttgtgtaagaaataaggt 359  Q
    |||||||||||||||||||||||| | || ||||||||  ||| |||||| ||||||  |||||||||||| ||||| | |||||||||| ||| | |||    
T  54175017 taaagggggagccttggcgcaacgat-aagttgttgtcatgtgactgaaatgtcacggattcaagtcctggaaaacagcctcttgtgtaa-aaacagggt 54175114  T
Q  360 aagactgcgtccaatacaccaaaatggcggga 391  Q
    ||| |||||| |||||||||||||||| ||||    
T  54175115 aaggctgcgtacaatacaccaaaatggtggga 54175146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 263 - 362
Target Start/End: Original strand, 54966976 - 54967075
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 362  Q
    |||||||| ||||||||||||| |||| ||||||||  ||| |||||||||||| ||||||||| ||||||| ||| |||||||||| ||| | ||||||    
T  54966976 aagggggaaccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcacatgttcaagttctggaaagaacctcttgtgtaaaaaacagggtaag 54967075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 271 - 349
Target Start/End: Complemental strand, 54640511 - 54640433
Alignment:
Q  271 gccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 349  Q
    |||||||||||||| |||| ||||||||  ||||||||||||||||| ||||||||| |||||||| | ||||||||||    
T  54640511 gccttggcgcaacggtaaaattgttgtcacgtggctgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaa 54640433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 305 - 386
Target Start/End: Original strand, 7038050 - 7038130
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatgg 386  Q
    ||||||||||||  |||||||||||| ||||| |||||||||||| ||||| ||||||||| ||| ||||||||||||||||    
T  7038050 ctgaaaggtcacaggttcaagtcctg-aaacagcttcttgtgtaaaaaatagggtaagacttcgtacaatacaccaaaatgg 7038130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 263 - 382
Target Start/End: Complemental strand, 17043571 - 17043455
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 362  Q
    ||||||||| ||||||||||||   || ||||||||  ||| ||||||||||||  |||||||||||||||||| | |||||||||| | | | ||||||    
T  17043571 aagggggagtcttggcgcaacg---aagttgttgtcaagtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaatacagggtaag 17043475  T
Q  363 actgcgtccaatacaccaaa 382  Q
     |||||| ||||||||||||    
T  17043474 gctgcgtacaatacaccaaa 17043455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 263 - 388
Target Start/End: Complemental strand, 23580388 - 23580263
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 362  Q
    ||||| ||||||||  ||||||||||| ||||||||  ||| ||||||||||||| |||||||| || |||| | | |||||||||| ||| | || |||    
T  23580388 aagggagagccttgatgcaacgctaaagttgttgtcacgtgactgaaaggtcacgggttcaagttctagaaagagcctcttgtgtaaaaaacaggggaag 23580289  T
Q  363 actgcgtccaatacaccaaaatggcg 388  Q
    |||||||   ||||||||||||||||    
T  23580288 actgcgtaggatacaccaaaatggcg 23580263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 309 - 414
Target Start/End: Original strand, 40915830 - 40915933
Alignment:
Q  309 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcgggagtctttctcagaccctg 408  Q
    ||||||||| |||||||||||||||||| | |||||||||| ||| |||||||| |||||| ||||||||| |||||| ||||| | ||| | |||||||    
T  40915830 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaa-aaacaaggtaaggctgcgtacaatacacc-aaatggtgggagcccttcccggaccctg 40915927  T
Q  409 cgtatg 414  Q
    ||||||    
T  40915928 cgtatg 40915933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 382
Target Start/End: Original strand, 20224947 - 20225056
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||| | |||||||||||||||||||| |||||||||  ||| | |||||| ||||||     
T  20224947 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgta--aaacagggtaaggctgcgta 20225044  T
Q  371 caatacaccaaa 382  Q
    ||||||||||||    
T  20225045 caatacaccaaa 20225056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 20908817 - 20908689
Alignment:
Q  264 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaag-gtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 362  Q
    ||||||||||||||| ||||| |||| ||||||||  ||| ||||||  || || |||||||||| |||||||| | |||| | ||| ||| ||||||||    
T  20908817 agggggagccttggcacaacggtaaagttgttgtcatgtgactgaaaatgttacatgttcaagtcatggaaacatcgtcttttctaaaaaagaaggtaag 20908718  T
Q  363 actgcgtccaatacaccaaaatggcggga 391  Q
     |||||| |||||||||||||||| ||||    
T  20908717 gctgcgtacaatacaccaaaatggtggga 20908689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 290 - 382
Target Start/End: Complemental strand, 41018946 - 41018855
Alignment:
Q  290 tttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||||||||  ||| ||||||||||||| |||||||||||||||||||| |||||||||| || || |||||| || ||| ||||||||||||    
T  41018946 tttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaa-aattagggtaaggctacgtacaatacaccaaa 41018855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 382
Target Start/End: Complemental strand, 48598995 - 48598886
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||  ||| | |||||| ||||||     
T  48598995 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgcgta 48598898  T
Q  371 caatacaccaaa 382  Q
    ||||||||||||    
T  48598897 caatacaccaaa 48598886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 272 - 382
Target Start/End: Original strand, 5648222 - 5648332
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||||||     
T  5648222 ccttggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa-aaacagggtaaggctgcgta 5648320  T
Q  371 caatacaccaaa 382  Q
    ||||||||||||    
T  5648321 caatacaccaaa 5648332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 272 - 382
Target Start/End: Complemental strand, 6430797 - 6430687
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| ||||||||| |||||||| | |||||||||| ||| | |||||| ||||||     
T  6430797 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcatggaaacagcctcttgtgtaa-aaacagggtaaggctgcgta 6430699  T
Q  371 caatacaccaaa 382  Q
    ||||||||||||    
T  6430698 caatacaccaaa 6430687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 42164317 - 42164242
Alignment:
Q  274 ttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 349  Q
    ||||||||||| |||| ||||||||  ||| ||||||||||||| ||||||||| |||||||||| ||||||||||    
T  42164317 ttggcgcaacggtaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtaa 42164242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 381
Target Start/End: Original strand, 10660367 - 10660477
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||| || ||||||||||||||||||||| |||| ||||| ||||| |||| | |||| |     
T  10660367 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctcttatgtaaaaaatagggtatggctgcata 10660466  T
Q  371 caatacaccaa 381  Q
    |||||||||||    
T  10660467 caatacaccaa 10660477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 381
Target Start/End: Original strand, 10874512 - 10874622
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||| || ||||||||||||||||||||| |||| ||||| ||||| |||| | |||| |     
T  10874512 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctcttatgtaaaaaatagggtatggctgcata 10874611  T
Q  371 caatacaccaa 381  Q
    |||||||||||    
T  10874612 caatacaccaa 10874622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 381
Target Start/End: Original strand, 21646927 - 21647037
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||  |||||||||||||||||| | |||||||||| ||||| |||||| ||||||     
T  21646927 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaaggctgcgta 21647026  T
Q  371 caatacaccaa 381  Q
    ||||| |||||    
T  21647027 caatataccaa 21647037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 305 - 391
Target Start/End: Original strand, 44357217 - 44357303
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcggga 391  Q
    ||||||||||| | ||||||||||| |||||||| | |||||||| |||||  |||||||  ||| |||||||||||||||||||||    
T  44357217 ctgaaaggtcatgagttcaagtcctagaaacaaccttttgtgtaataaatagagtaagacgacgtacaatacaccaaaatggcggga 44357303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 263 - 380
Target Start/End: Original strand, 51420528 - 51420646
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtg-ttcaagtcctggaaacaacttcttgtgtaagaaataaggtaa 361  Q
    |||||||||||||||||||||| | || ||||||||  ||| |||||||||||  || |||||||| |||||||||| |||||||||  ||| | |||||    
T  51420528 aagggggagccttggcgcaacggtgaagttgttgtcacgtgactgaaaggtcagttgattcaagtcatggaaacaacctcttgtgtagaaaacagggtaa 51420627  T
Q  362 gactgcgtccaatacacca 380  Q
    | ||| || ||||||||||    
T  51420628 ggctgggtacaatacacca 51420646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 43035226 - 43035307
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgc 367  Q
    |||| ||||||||  ||| ||||||||||||| |||||||||| ||||||||| |||||||||||||| | |||||| ||||    
T  43035226 taaagttgttgtcacgtgactgaaaggtcacgggttcaagtccaggaaacaacctcttgtgtaagaaacacggtaaggctgc 43035307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 30496501 - 30496414
Alignment:
Q  263 aagggggagccttggcgcaacgctaaat-ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 349  Q
    ||||||||| |||||||||||  ||||  ||||||||  ||| ||||||||||||||||||||||| |||||||| | ||||||||||    
T  30496501 aagggggagacttggcgcaactgtaaaagttgttgtcacgtgactgaaaggtcacgtgttcaagtcatggaaacagcctcttgtgtaa 30496414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 382
Target Start/End: Original strand, 30639343 - 30639453
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||  ||||||||||||||||||   |||||||||| ||| | |||||| ||||||     
T  30639343 ccttggcgcaactggtaaagttgttgtcttgtgactgaaaggtcactggttcaagtcctggaaacagactcttgtgtaa-aaacagggtaaggctgcgta 30639441  T
Q  371 caatacaccaaa 382  Q
    ||||||||||||    
T  30639442 caatacaccaaa 30639453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 382
Target Start/End: Original strand, 47443956 - 47444031
Alignment:
Q  307 gaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||||| |||||||||||||||||| | ||||| |||| ||| | |||||| |||||| ||||||||||||    
T  47443956 gaaaggtcacgggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaaa 47444031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 49938771 - 49938684
Alignment:
Q  263 aagggggagccttggcgcaacgctaaat-ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 349  Q
    ||||||||||| |||||||||| ||||  ||||||||  ||| ||||||||||||  |||||||||||||||||| | ||||||||||    
T  49938771 aagggggagccctggcgcaacggtaaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaa 49938684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 274 - 382
Target Start/End: Complemental strand, 11054316 - 11054209
Alignment:
Q  274 ttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtcca 372  Q
    |||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||| |||||   |||||||||  ||| | ||||||||||||| ||    
T  11054316 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctgaaaacagtctcttgtgta--aaacagggtaagactgcgtaca 11054219  T
Q  373 atacaccaaa 382  Q
    ||||||||||    
T  11054218 atacaccaaa 11054209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 265 - 383
Target Start/End: Original strand, 25343144 - 25343262
Alignment:
Q  265 gggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagac 364  Q
    ||||||| |||||||||| | |||| ||||||||  ||| |||| |||||||  |||||||| ||||||| |   |||||||||| ||| | |||||| |    
T  25343144 gggggaggcttggcgcaatggtaaagttgttgtcacgtgactgataggtcacaggttcaagttctggaaatagtctcttgtgtaaaaaacagggtaaggc 25343243  T
Q  365 tgcgtccaatacaccaaaa 383  Q
    ||||| |||||||||||||    
T  25343244 tgcgtacaatacaccaaaa 25343262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 414
Target Start/End: Complemental strand, 20639777 - 20639688
Alignment:
Q  325 gtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcgggagtctttctcagaccctgcgtatg 414  Q
    |||||||||||| | |||||||||| ||| | |||||| |||||| |||||||||||||||| ||||  | ||| | |||||||||||||    
T  20639777 gtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaatggtgggaccccttcccggaccctgcgtatg 20639688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 391
Target Start/End: Complemental strand, 30581639 - 30581518
Alignment:
Q  271 gccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaagactgcgt 369  Q
    ||||||||||||||||||| ||||||||   |  || |||||||| | ||||||||| |||||||||| |||||||| || ||| | ||||||  || ||    
T  30581639 gccttggcgcaacgctaaagttgttgtcacatcactaaaaggtcaagggttcaagtcgtggaaacaacctcttgtgtaaaaaaacagggtaagggtgtgt 30581540  T
Q  370 ccaatacaccaaaatggcggga 391  Q
     |||||||||||||||| ||||    
T  30581539 acaatacaccaaaatggtggga 30581518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 286 - 382
Target Start/End: Complemental strand, 47528685 - 47528591
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||| ||||||||  ||| ||||||||||||  |||||||||||||||||| | |||||||||  ||| | |||||| |||||| ||||||||||||    
T  47528685 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 47528591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 382
Target Start/End: Complemental strand, 7385629 - 7385537
Alignment:
Q  290 tttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||||||||  ||| ||||||||||||| ||||||| |||||||||| | || ||||||| ||||| ||||||  || || ||||||||||||    
T  7385629 tttgttgtcatgtgactgaaaggtcacgggttcaagccctggaaacagcctcatgtgtaaaaaatagggtaaggttgtgtgcaatacaccaaa 7385537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 367
Target Start/End: Complemental strand, 17315470 - 17315375
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgc 367  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||| |||| |||||||| |||||||||| ||| |||||||| ||||    
T  17315470 ccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgggttcaattcctcgaaacaacctcttgtgtaa-aaacaaggtaaggctgc 17315375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 25463119 - 25463163
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 349  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||    
T  25463119 ctgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaa 25463163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 335
Target Start/End: Complemental strand, 50856416 - 50856344
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaac 335  Q
    |||||||||||||||||||||| |||| ||||||||   ||  |||||||||||| ||||||||||| |||||    
T  50856416 aagggggagccttggcgcaacggtaaagttgttgtcacatgattgaaaggtcacgggttcaagtcctagaaac 50856344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 272 - 382
Target Start/End: Complemental strand, 5306835 - 5306725
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||| ||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||| ||  | ||||||  |||||     
T  5306835 ccttggcgcaactggtaaagttgatgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa-aatcagggtaaggttgcgta 5306737  T
Q  371 caatacaccaaa 382  Q
    ||||||||||||    
T  5306736 caatacaccaaa 5306725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 277 - 356
Target Start/End: Complemental strand, 30690349 - 30690270
Alignment:
Q  277 gcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataa 356  Q
    ||||| ||||||| | ||||||  ||| ||||||||||||| |||||||||||||||| | | |||||||||| ||||||    
T  30690349 gcgcagcgctaaagtggttgtcaagtgactgaaaggtcacgggttcaagtcctggaaaaagcctcttgtgtaaaaaataa 30690270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 382
Target Start/End: Complemental strand, 9832449 - 9832374
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||||||| |||||||||||| ||||| | |||||||||  ||| | |||||| |||||| ||||||||||||    
T  9832449 ctgaaaggtcacgggttcaagtcctgaaaacagcctcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 9832374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 382
Target Start/End: Complemental strand, 9987957 - 9987895
Alignment:
Q  320 ttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||||||||||||| ||||||||||  |||| |||||| |||| | ||||||||||||    
T  9987957 ttcaagtcctggaaacaacctcttgtgtaaacaatagggtaaggctgcatacaatacaccaaa 9987895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 381
Target Start/End: Original strand, 16911525 - 16911635
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| || |||||||||| ||||||||||| |||||| | |||||||||  ||  | |||||| ||||||     
T  16911525 ccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctagaaacagcctcttgtgtacaaatcagggtaaggctgcgta 16911624  T
Q  371 caatacaccaa 381  Q
    |||||||||||    
T  16911625 caatacaccaa 16911635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 305 - 382
Target Start/End: Complemental strand, 10380080 - 10380004
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||||||||||| ||||||||||||  ||||||| |||||||||| ||||| | ||| | ||||| ||||||||||||    
T  10380080 ctgaaaggtcacttgttcaagtcctacaaacaacctcttgtgtaa-aaataggataaaattgcgtacaatacaccaaa 10380004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 305 - 362
Target Start/End: Original strand, 37494848 - 37494905
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 362  Q
    ||||||||||||  |||||||||||||||||||| |||||||||| ||| | ||||||    
T  37494848 ctgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaag 37494905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 345
Target Start/End: Complemental strand, 32629445 - 32629366
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgt 345  Q
    |||||||||||||||||||||| ||||   ||||||  ||| ||||||||||||| |||||| |||| |||||| | ||||||    
T  32629445 aagggggagccttggcgcaacggtaaa---gttgtcatgtgactgaaaggtcacgggttcaaatcctcgaaacagcctcttgt 32629366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 382
Target Start/End: Complemental strand, 47441711 - 47441591
Alignment:
Q  262 aaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaa 361  Q
    ||||| ||||| ||||||||||| |||| ||||||||  ||| ||||||||||||  ||||||||||  ||||||   |||| ||||| ||  | |||||    
T  47441711 aaaggaggagctttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtccaagaaacagtctcttttgtaaaaatcagggtaa 47441612  T
Q  362 gactgcgtccaatacaccaaa 382  Q
    | ||| || ||||||||||||    
T  47441611 ggctgtgtacaatacaccaaa 47441591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 12257767 - 12257688
Alignment:
Q  269 gagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgta 348  Q
    |||||||| ||||||| |||| ||||||||  |||  |||||||||||| |||||| |||| |||||| | |||||||||    
T  12257767 gagccttgacgcaacggtaaagttgttgtcacgtgattgaaaggtcacgggttcaaatcctagaaacagcgtcttgtgta 12257688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 414
Target Start/End: Complemental strand, 12711561 - 12711479
Alignment:
Q  332 aaacaacttcttgtgtaagaaa-taaggtaagactgcgtccaatacaccaaaatggcgggagtctttctcagaccctgcgtatg 414  Q
    ||||||| |||||||||| ||| || ||||||||||||| ||||||||| |||||||||||  | ||||||||||  |||||||    
T  12711561 aaacaacatcttgtgtaaaaaaatagggtaagactgcgtacaatacacc-aaatggcgggaccccttctcagacctagcgtatg 12711479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 391
Target Start/End: Original strand, 21489099 - 21489170
Alignment:
Q  320 ttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcggga 391  Q
    ||||||||||||||||| | ||||| |||| ||| |  |||||||||||| |||| ||||||||||| ||||    
T  21489099 ttcaagtcctggaaacagcctcttgcgtaaaaaacagagtaagactgcgtacaatgcaccaaaatggtggga 21489170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 349
Target Start/End: Complemental strand, 39077931 - 39077888
Alignment:
Q  306 tgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 349  Q
    |||||||||||| |||||||||||||||||| | ||||||||||    
T  39077931 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa 39077888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 382
Target Start/End: Complemental strand, 29208034 - 29207959
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||||||| ||||||||||||||||   | |||||||||  ||| | |||||| |||||| ||||||||||||    
T  29208034 ctgaaaggtcacgggttcaagtcctggaaattgcctcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 29207959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 391
Target Start/End: Complemental strand, 49938612 - 49938491
Alignment:
Q  270 agccttggcgcaacgctaaat-ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcg 368  Q
    ||||||||||||||| ||||  ||||||||  ||| ||||||||||||   |||||||| ||||| || | | |||||||| ||| | |||||| |||||    
T  49938612 agccttggcgcaacggtaaaagttgttgtcacgtgactgaaaggtcacagattcaagtcttggaagcagcgtattgtgtaa-aaacagggtaaggctgcg 49938514  T
Q  369 tccaatacaccaaaatggcggga 391  Q
    |||||| || |||||||| ||||    
T  49938513 tccaattcatcaaaatggtggga 49938491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 345
Target Start/End: Original strand, 6966044 - 6966129
Alignment:
Q  260 ataaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgt 345  Q
    |||||| |||||||| | ||||||| |||| ||||||||   ||  ||| || ||||| ||||||||| |||||||||||||||||    
T  6966044 ataaagcgggagcctggacgcaacgataaagttgttgtcacatgagtgatagttcacgggttcaagtcttggaaacaacttcttgt 6966129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 391
Target Start/End: Complemental strand, 39029242 - 39029113
Alignment:
Q  262 aaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaa 361  Q
    ||||||||||||||   | |||| |||| ||||||||  ||| || ||||||||   ||||||| | |||||||| | |||||||||| ||| | |||||    
T  39029242 aaagggggagccttaaggaaacggtaaagttgttgtcgtgtgactaaaaggtcataggttcaagccttggaaacagcctcttgtgtaaaaaacagggtaa 39029143  T
Q  362 gactgcgtccaatacaccaaaatggcggga 391  Q
    | ||| || |||||||| ||||||| ||||    
T  39029142 ggctgtgtacaatacacgaaaatggtggga 39029113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 383
Target Start/End: Complemental strand, 44363289 - 44363192
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 383  Q
    |||| ||||||||  ||| ||||||||||||| |||||||||||| ||||| | || ||||||| ||| | |||| | |||||| |||  ||||||||    
T  44363289 taaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctgaaaacagcctcgtgtgtaaaaaacagggtagggctgcgtacaacgcaccaaaa 44363192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 6e-23; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 263 - 382
Target Start/End: Complemental strand, 28362325 - 28362206
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 362  Q
    |||||||||||||||||||||| |||| ||||||||  ||||||||||||||||  ||||||||||| |||||  | |||||||||| |||   ||||||    
T  28362325 aagggggagccttggcgcaacggtaaagttgttgtcatgtggctgaaaggtcacaggttcaagtcctagaaactgcctcttgtgtaaaaaacttggtaag 28362226  T
Q  363 actgcgtccaatacaccaaa 382  Q
     |||||| ||||||||||||    
T  28362225 gctgcgtacaatacaccaaa 28362206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 266 - 384
Target Start/End: Original strand, 7644914 - 7645032
Alignment:
Q  266 ggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagact 365  Q
    ||||||||||||||||  | ||||||||||||   ||| ||||||||||||| |||||||||||||||||| | |||||||||| ||| | |||||||      
T  7644914 ggggagccttggcgcagtggtaaatttgttgtaacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagata 7645013  T
Q  366 gcgtccaatacaccaaaat 384  Q
    |||| ||||||||||||||    
T  7645014 gcgtacaatacaccaaaat 7645032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 264 - 382
Target Start/End: Complemental strand, 23419853 - 23419735
Alignment:
Q  264 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 363  Q
    ||||||||||||||||||||| |||| ||| ||||  ||| || |||||||||  |||||||| ||||||||| | |||||||||| ||| | |||||||    
T  23419853 agggggagccttggcgcaacggtaaagttgctgtcatgtgactaaaaggtcacaggttcaagttctggaaacagcctcttgtgtaaaaaacagggtaaga 23419754  T
Q  364 ctgcgtccaatacaccaaa 382  Q
    |||||| ||||||||||||    
T  23419753 ctgcgtacaatacaccaaa 23419735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 274 - 382
Target Start/End: Complemental strand, 19427059 - 19426950
Alignment:
Q  274 ttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtcca 372  Q
    |||||||||| | |||| ||||||||  ||| | ||||||||||| |||||||||||||||||| | |||||||||| ||||| ||||||||||||| ||    
T  19427059 ttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaagactgcgtaca 19426960  T
Q  373 atacaccaaa 382  Q
    ||||||||||    
T  19426959 atacaccaaa 19426950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 286 - 382
Target Start/End: Complemental strand, 11617745 - 11617649
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||| ||||||||  ||| ||||||||||||  |||||||||||||||||||| |||||||||| ||| | ||||||||||||| ||||||||||||    
T  11617745 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaa 11617649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 264 - 382
Target Start/End: Complemental strand, 48123663 - 48123545
Alignment:
Q  264 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 363  Q
    ||||||||||||||||||||| |||| ||||| ||  ||| ||||||||||| | |||||||||||||||||| | ||||||||||  || | ||||| |    
T  48123663 agggggagccttggcgcaacggtaaagttgttatcatgtgtctgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaataacagggtaaaa 48123564  T
Q  364 ctgcgtccaatacaccaaa 382  Q
    |||| | ||||||||||||    
T  48123563 ctgcatacaatacaccaaa 48123545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 305 - 391
Target Start/End: Original strand, 29907416 - 29907502
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcggga 391  Q
    ||||||||||||| ||||||||||| |||||| | |||||||||| |||||  ||||| |||||| |||||||||||||||| ||||    
T  29907416 ctgaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaatagtgtaaggctgcgttcaatacaccaaaatggtggga 29907502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 272 - 381
Target Start/End: Original strand, 46354157 - 46354267
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  |||  || ||||||||| |||||||||||||||||||| |||||||||| ||| | |||||| ||||||     
T  46354157 ccttggcgcaactggtaaagttgttgtcatgtgattggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcgta 46354256  T
Q  371 caatacaccaa 381  Q
    |||||||||||    
T  46354257 caatacaccaa 46354267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 309 - 382
Target Start/End: Original strand, 7879639 - 7879712
Alignment:
Q  309 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||| |||||||||||||||||||  |||||||||| ||| |||||||| |||||| ||||||||||||    
T  7879639 aaggtcacgggttcaagtcctggaaacaatctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccaaa 7879712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 265 - 382
Target Start/End: Original strand, 19265772 - 19265888
Alignment:
Q  265 gggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagac 364  Q
    |||||||| ||||||||||| |||| ||||||||  ||| ||||||||||||| ||||||||| |||| ||| |  ||||||||| ||| | |||||| |    
T  19265772 gggggagcattggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcttggatacagccgcttgtgtaa-aaagagggtaaggc 19265870  T
Q  365 tgcgtccaatacaccaaa 382  Q
    ||||| ||||||||||||    
T  19265871 tgcgtacaatacaccaaa 19265888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 18512588 - 18512517
Alignment:
Q  307 gaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacacc 379  Q
    ||||||||||| |||||||||||||||||||| |||||||||| ||||| |||||| |||||| |||||||||    
T  18512588 gaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaa-aaatagggtaaggctgcgtacaatacacc 18512517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 382
Target Start/End: Complemental strand, 42391250 - 42391161
Alignment:
Q  291 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||  ||| ||||||||||||| |||||||||||||||||| |||||||||||  ||| | |||||| |||||| ||||||||||||    
T  42391250 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcttcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 42391161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 263 - 382
Target Start/End: Original strand, 6736845 - 6736963
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 362  Q
    |||||||||||||| | ||||  |||| ||||||||  | | ||||||||||||| |||||||||||  ||||||| |||||| ||| ||| ||||||||    
T  6736845 aagggggagccttgacacaacagtaaagttgttgtcatgcgactgaaaggtcacgggttcaagtcctcaaaacaacctcttgtataa-aaacaaggtaag 6736943  T
Q  363 actgcgtccaatacaccaaa 382  Q
    ||||| | ||||||||||||    
T  6736944 actgcatacaatacaccaaa 6736963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 272 - 382
Target Start/End: Original strand, 42798632 - 42798743
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| ||||||||| ||||||||   |||||||||| ||| |||||||| ||||||     
T  42798632 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttggaaacagtctcttgtgtaaaaaacaaggtaaggctgcgta 42798731  T
Q  371 caatacaccaaa 382  Q
    ||||||||||||    
T  42798732 caatacaccaaa 42798743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 382
Target Start/End: Complemental strand, 10693228 - 10693134
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||  ||| | |||||| |||||| ||||||||||||    
T  10693228 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaagagggtaaggctgcgtacaatacaccaaa 10693134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 272 - 382
Target Start/End: Complemental strand, 48735293 - 48735183
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcc-tggaaacaacttcttgtgtaagaaataaggtaagactgcgt 369  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||| |||||||||| |||||||||  ||| | |||||| ||||||    
T  48735293 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtccttggaaacaacctcttgtgta--aaacacggtaaggctgcgt 48735196  T
Q  370 ccaatacaccaaa 382  Q
     ||||||||||||    
T  48735195 acaatacaccaaa 48735183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 272 - 382
Target Start/End: Complemental strand, 2541192 - 2541080
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctg-aaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgt 369  Q
    |||||||||||| | |||| ||||||||  ||| ||| |||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||||||    
T  2541192 ccttggcgcaactggtaaagttgttgtcatgtgactggaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgt 2541093  T
Q  370 ccaatacaccaaa 382  Q
     | ||||||||||    
T  2541092 actatacaccaaa 2541080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 264 - 383
Target Start/End: Original strand, 12473259 - 12473379
Alignment:
Q  264 agggggagccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 362  Q
    ||||| |||||||||||||| | |||| ||||||||  ||  ||||||||||| | |||||||||||| ||||||| |||||||| | ||| | ||||||    
T  12473259 aggggtagccttggcgcaaccggtaaagttgttgtcatgtatctgaaaggtcatgggttcaagtcctgcaaacaacctcttgtgtcaaaaacagggtaag 12473358  T
Q  363 actgcgtccaatacaccaaaa 383  Q
      ||||| |||||||||||||    
T  12473359 gatgcgtacaatacaccaaaa 12473379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 272 - 382
Target Start/End: Complemental strand, 21172179 - 21172070
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||  ||||||||||||| |||||||||||||||||| | |||||||||  ||| | |||||| ||||||     
T  21172179 ccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgcgta 21172082  T
Q  371 caatacaccaaa 382  Q
    ||||||||||||    
T  21172081 caatacaccaaa 21172070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 286 - 382
Target Start/End: Complemental strand, 33872066 - 33871971
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||| ||||||||  ||| |||||||||| || |||||||||||||||||||| |||||||||| ||| | | |||| |||||| ||||||||||||    
T  33872066 taaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaa-aaacaggataaggctgcgtacaatacaccaaa 33871971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 309 - 381
Target Start/End: Original strand, 47716460 - 47716532
Alignment:
Q  309 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 381  Q
    ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| |||||| |||||||||||    
T  47716460 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa 47716532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 381
Target Start/End: Original strand, 42805502 - 42805597
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 381  Q
    |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||| || |||||||||||    
T  42805502 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccaa 42805597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 381
Target Start/End: Original strand, 43557450 - 43557545
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 381  Q
    |||| ||||||||  ||| ||||||||||| | |||||||||||||||||| | |||||||||| ||| |  ||||| |||||| |||||||||||    
T  43557450 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgcgtacaatacaccaa 43557545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 334
Target Start/End: Original strand, 13805058 - 13805128
Alignment:
Q  264 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaa 334  Q
    ||||||||||||||||||| | |||| ||||||||  ||| ||||||||| ||| ||||||||||||||||    
T  13805058 agggggagccttggcgcaatggtaaagttgttgtcatgtgactgaaaggtaacgggttcaagtcctggaaa 13805128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 382
Target Start/End: Original strand, 19266406 - 19266524
Alignment:
Q  264 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 363  Q
    |||||||||||||| |||||| |||| ||||||||  ||| ||||||||||  | |||||||||||| ||| | |  |||| |||| ||| | ||||||     
T  19266406 agggggagccttggtgcaacggtaaagttgttgtcatgtgactgaaaggtcgtgggttcaagtcctgaaaatagccacttgcgtaaaaaacagggtaagg 19266505  T
Q  364 ctgcgtccaatacaccaaa 382  Q
    |||||| ||||||||||||    
T  19266506 ctgcgtacaatacaccaaa 19266524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 31591247 - 31591201
Alignment:
Q  303 ggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 349  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||    
T  31591247 ggctgaaaggtcacgagttcaagtcctggaaacaacctcttgtgtaa 31591201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 32233314 - 32233228
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 349  Q
    |||||||| ||||||||||||   ||| ||||||||   || ||||||||||| | |||||||||||||||||||| ||||||||||    
T  32233314 aagggggacccttggcgcaacagaaaaattgttgtcacctgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaa 32233228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 386
Target Start/End: Original strand, 16341231 - 16341356
Alignment:
Q  261 taaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggta 360  Q
    |||||||| ||| |||| |||||| |||| ||||| ||  ||   |||||||||||| |||||||| || |||||| | |||||||||| ||| | ||||    
T  16341231 taaaggggcagcgttggagcaacggtaaagttgttatcatgtatttgaaaggtcacgggttcaagttctagaaacagcctcttgtgtaaaaaacagggta 16341330  T
Q  361 agactgcgtccaatacaccaaaatgg 386  Q
    || || ||| ||||||||||||||||    
T  16341331 aggctacgtacaatacaccaaaatgg 16341356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 286 - 383
Target Start/End: Complemental strand, 22699127 - 22699030
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 383  Q
    |||| ||||||||  ||| ||||||||| | | |||||||||||||||| |   |||||||||| ||| | ||||||||||||| |||||||||||||    
T  22699127 taaagttgttgtcatgtgactgaaaggttatgggttcaagtcctggaaatagtctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaaa 22699030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 306 - 383
Target Start/End: Original strand, 35203437 - 35203514
Alignment:
Q  306 tgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 383  Q
    |||||||||||| ||||||||||||||||||   |||||||||| ||| | | ||||||||||| ||||| |||||||    
T  35203437 tgaaaggtcacgggttcaagtcctggaaacattctcttgtgtaaaaaacaggataagactgcgtacaatataccaaaa 35203514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 362
Target Start/End: Original strand, 7193063 - 7193139
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 362  Q
    |||| ||||||||  ||| ||||||||||||| ||||||||||| |||||||| ||||||||||  |||| ||||||    
T  7193063 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaacaatatggtaag 7193139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 382
Target Start/End: Original strand, 11741778 - 11741867
Alignment:
Q  291 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||  ||| ||||||||||| | |||||||||||| ||||| ||||| |||||  ||||| |||||| |||||| ||||||||||||    
T  11741778 ttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacagcttctagtgta--aaatagggtaaggctgcgtacaatacaccaaa 11741867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 382
Target Start/End: Original strand, 32758224 - 32758333
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||  |||||||||||||||||| | |||||||||  ||| | |||||| ||| ||     
T  32758224 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgtgta 32758321  T
Q  371 caatacaccaaa 382  Q
    ||||||||||||    
T  32758322 caatacaccaaa 32758333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 307 - 382
Target Start/End: Original strand, 27629633 - 27629708
Alignment:
Q  307 gaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||||| |||||||||||||||||| | |||||||||| ||| | ||||||  |||||  |||||||||||    
T  27629633 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggttgcgtaaaatacaccaaa 27629708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 47078025 - 47077947
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 349  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| ||||||||||||||||||   ||||||||||    
T  47078025 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgtgtaa 47077947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 277 - 382
Target Start/End: Complemental strand, 14099172 - 14099067
Alignment:
Q  277 gcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatac 376  Q
    |||| ||| |||| ||||||||  ||| ||||||||||| | ||| |||||||||||| | | | |||||||| ||| | | ||||||||||| ||||||    
T  14099172 gcgctacggtaaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaacaggttaagactgcgtacaatac 14099073  T
Q  377 accaaa 382  Q
    ||||||    
T  14099072 accaaa 14099067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 277 - 382
Target Start/End: Complemental strand, 14409189 - 14409084
Alignment:
Q  277 gcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatac 376  Q
    |||| ||| |||| ||||||||  ||| ||||||||||| | ||| |||||||||||| | | | |||||||| ||| | | ||||||||||| ||||||    
T  14409189 gcgctacggtaaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaacaggttaagactgcgtacaatac 14409090  T
Q  377 accaaa 382  Q
    ||||||    
T  14409089 accaaa 14409084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 272 - 379
Target Start/End: Complemental strand, 35334986 - 35334880
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| ||||||||||||||||||   ||| |||||| ||| | |||||||||| ||     
T  35334986 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgagttcaagtcctggaaaca--gtctcgtgtaaaaaacagggtaagactgtgta 35334889  T
Q  371 caatacacc 379  Q
    |||||||||    
T  35334888 caatacacc 35334880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 382
Target Start/End: Complemental strand, 2663057 - 2662996
Alignment:
Q  319 gttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||||||||||||||||| | |||||||||  ||||| |||||| |||||| ||||||||||||    
T  2663057 gttcaagtcctggaaacagcctcttgtgta--aaatagggtaaggctgcgtacaatacaccaaa 2662996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 413
Target Start/End: Complemental strand, 42102066 - 42101915
Alignment:
Q  262 aaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaa 361  Q
    |||||||  |||||||| ||||| |||| ||||||||  ||| ||| |||||||   |||||||||||||||||| | ||||  |||| ||| | |||||    
T  42102066 aaaggggaggccttggcacaacggtaaagttgttgtcacgtgactggaaggtcaaaagttcaagtcctggaaacagcctcttccgtaaaaaacagggtaa 42101967  T
Q  362 gactgcgtccaatacaccaaaatggcgggagtctttctcagaccctgcgtat 413  Q
     ||||||| || ||| | ||| ||| ||||  ||||| | ||||||||||||    
T  42101966 cactgcgtacagtactctaaagtggtgggaccctttcccggaccctgcgtat 42101915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 312 - 382
Target Start/End: Complemental strand, 15108527 - 15108458
Alignment:
Q  312 gtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||||| ||||||||||||||||||  ||||||||||| ||| |||||||| ||| || ||||||| ||||    
T  15108527 gtcacgagttcaagtcctggaaacagtttcttgtgtaa-aaacaaggtaaggctgtgtacaatacatcaaa 15108458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 272 - 345
Target Start/End: Complemental strand, 42496007 - 42495933
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgt 345  Q
    |||||||||||| | |||| ||||||||   || ||||||||||||| |||||||||||||||||| | ||||||    
T  42496007 ccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgt 42495933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 349
Target Start/End: Complemental strand, 3469354 - 3469273
Alignment:
Q  268 ggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 349  Q
    ||||||||||||||||| |||| ||||||||  ||| ||||||||||||    ||||||||| ||||||   ||||||||||    
T  3469354 ggagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcacagactcaagtcctagaaacattctcttgtgtaa 3469273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 383
Target Start/End: Complemental strand, 5180314 - 5180217
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 383  Q
    |||| ||||||||  ||| ||||||||||| | |||||| | ||||||||| | |||||||| | ||| | |||||||||| || ||| |||||||||    
T  5180314 taaagttgttgtcatgtgactgaaaggtcaagggttcaacttctggaaacagcctcttgtgtcaaaaacagggtaagactgtgtacaacacaccaaaa 5180217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 382
Target Start/End: Complemental strand, 38262330 - 38262257
Alignment:
Q  309 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||| ||||||||||||||||||   |||||||||| ||||| |||||   ||| | ||||||||||||    
T  38262330 aaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaaaatatggtaatgttgcatacaatacaccaaa 38262257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 382
Target Start/End: Original strand, 42476851 - 42476945
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||| ||||||||  ||| || ||||||||||  ||||||| |||||||||   ||||||||||  || |||||||| |||||| ||||||||||||    
T  42476851 taaagttgttgtcatgtgactaaaaggtcacggattcaagttctggaaacagtctcttgtgtaa--aacaaggtaaggctgcgtacaatacaccaaa 42476945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 291 - 382
Target Start/End: Complemental strand, 8149098 - 8149006
Alignment:
Q  291 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtg-taagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||  ||| ||| || |||||| |||||||||||| |||| || ||||||| ||| ||||| ||||||  ||||| ||||||||||||    
T  8149098 ttgttgtcatgtgactgcaaagtcacgagttcaagtcctgaaaactacctcttgtgttaaaaaatagggtaaggttgcgtacaatacaccaaa 8149006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 272 - 383
Target Start/End: Complemental strand, 14732994 - 14732883
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| |||||| |||| | |||||||||||||||||| | ||   ||||| ||| | |||||| ||||||     
T  14732994 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaagtcatgggttcaagtcctggaaacagcctcccatgtaaaaaacagggtaaggctgcgt- 14732896  T
Q  371 caatacaccaaaa 383  Q
    |||||||||||||    
T  14732895 caatacaccaaaa 14732883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 4e-21; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 262 - 386
Target Start/End: Complemental strand, 7947553 - 7947429
Alignment:
Q  262 aaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaa 361  Q
    ||||||||||||||||||||||| |||| ||| |||   ||| ||||||||||||  |||||| ||||||||||||| || ||||||| ||  | |||||    
T  7947553 aaagggggagccttggcgcaacggtaaagttggtgttgcgtgactgaaaggtcaccggttcaactcctggaaacaacctcctgtgtaaaaaccagggtaa 7947454  T
Q  362 gactgcgtccaatacaccaaaatgg 386  Q
    | |||||| ||||||||||||||||    
T  7947453 ggctgcgtacaatacaccaaaatgg 7947429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 291 - 414
Target Start/End: Complemental strand, 29356009 - 29355885
Alignment:
Q  291 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa-aatggcgg 389  Q
    ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||||||| | |||||| |||||| ||||||||||| ||||| ||    
T  29356009 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctgcgtacaatacaccaataatggtgg 29355910  T
Q  390 gagtctttctcagaccctgcgtatg 414  Q
    ||  | ||| | |||||||||||||    
T  29355909 gaccccttcccggaccctgcgtatg 29355885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 273 - 414
Target Start/End: Complemental strand, 12222088 - 12221945
Alignment:
Q  273 cttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtcc 371  Q
    ||||||||||| | |||| ||||||||  ||| ||||||||||||| ||||||||| |||||||| | |||||||||| ||| | |||||| |||||| |    
T  12222088 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtac 12221989  T
Q  372 aatacaccaa-aatggcgggagtctttctcagaccctgcgtatg 414  Q
    |||||||||| ||||| ||||  | ||| | |||||||||||||    
T  12221988 aatacaccaataatggtgggaccccttcccggaccctgcgtatg 12221945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 263 - 382
Target Start/End: Complemental strand, 13905159 - 13905040
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 362  Q
    |||||||| ||||||||||||| |||| ||||||||  ||| ||||||||||||| | |||||||||| |||| || |||||||||| ||| | ||||||    
T  13905159 aagggggaaccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcacgggctcaagtcctgaaaacgacctcttgtgtaaaaaacagggtaag 13905060  T
Q  363 actgcgtccaatacaccaaa 382  Q
     |||| | |||| |||||||    
T  13905059 gctgcatacaattcaccaaa 13905040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 272 - 382
Target Start/End: Complemental strand, 3815249 - 3815138
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| |||||| |||||| ||||||||||||||||||   | |||||||| ||||| |||| ||||||||     
T  3815249 ccttggcgcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcctggaaacagactattgtgtaaaaaatatggtacgactgcgta 3815150  T
Q  371 caatacaccaaa 382  Q
    ||||||||||||    
T  3815149 caatacaccaaa 3815138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 272 - 382
Target Start/End: Original strand, 1346927 - 1347036
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| |  ||||||||  ||| | |||||| ||||||     
T  1346927 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagccacttgtgta--aaacagggtaaggctgcgta 1347024  T
Q  371 caatacaccaaa 382  Q
    ||||||||||||    
T  1347025 caatacaccaaa 1347036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 272 - 382
Target Start/End: Complemental strand, 1354927 - 1354818
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||  |||||||||||||||||| | |||||||||  ||| | |||||| ||||||     
T  1354927 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcactggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgcgta 1354830  T
Q  371 caatacaccaaa 382  Q
    ||||||||||||    
T  1354829 caatacaccaaa 1354818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 286 - 414
Target Start/End: Original strand, 9161101 - 9161229
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa-aat 384  Q
    |||| ||||||||  ||| ||||||||||||  |||||||||||||||||| | |||||||||| ||| |  ||||| |||||| ||||||| ||| |||    
T  9161101 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaa-aaacagagtaaggctgcgtacaatacatcaataat 9161199  T
Q  385 ggcgggagtctttctcagaccctgcgtatg 414  Q
    || ||||  | ||||| |||||||||||||    
T  9161200 ggtgggaccccttctcggaccctgcgtatg 9161229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 2166550 - 2166506
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 349  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||    
T  2166550 ctgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaa 2166506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 2178183 - 2178139
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 349  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||    
T  2178183 ctgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaa 2178139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 308 - 383
Target Start/End: Original strand, 14553511 - 14553586
Alignment:
Q  308 aaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 383  Q
    |||||||||  |||||||||||||||| | |||||||||||| ||||| |||||| ||| ||  ||||||||||||    
T  14553511 aaaggtcacaggttcaagtcctggaaatagcttcttgtgtaaaaaatagggtaaggctgtgtataatacaccaaaa 14553586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 347
Target Start/End: Original strand, 12889379 - 12889465
Alignment:
Q  261 taaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt 347  Q
    |||||||||||||||||| ||||| |||| ||||||||  |||  |||||||||||  ||||||||| || ||||| | ||||||||    
T  12889379 taaagggggagccttggcacaacggtaaagttgttgtcacgtgagtgaaaggtcacaggttcaagtcttgaaaacagcctcttgtgt 12889465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 272 - 376
Target Start/End: Original strand, 8409206 - 8409311
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| |||||||   ||| |||||||||||||  ||||||||||||||||  | |||||||||| ||| | |||||| ||||||     
T  8409206 ccttggcgcaactggtaaagttgttgtaatgtgactgaaaggtcacggattcaagtcctggaaactgcctcttgtgtaaaaaacagggtaaggctgcgta 8409305  T
Q  371 caatac 376  Q
    ||||||    
T  8409306 caatac 8409311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 305 - 362
Target Start/End: Original strand, 17432337 - 17432394
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 362  Q
    ||||||||||||  |||||||||||||||||||| |||||||||| ||| | ||||||    
T  17432337 ctgaaaggtcacaggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaag 17432394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 381
Target Start/End: Original strand, 6024234 - 6024306
Alignment:
Q  309 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 381  Q
    |||||||||  ||||| |||| |||||| | |||||||||| ||| | ||||||||||||| |||||||||||    
T  6024234 aaggtcacggtttcaaatcctagaaacagcctcttgtgtaaaaaacatggtaagactgcgtacaatacaccaa 6024306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 358
Target Start/End: Complemental strand, 14975252 - 14975165
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataagg 358  Q
    |||||||||||| | |||| ||||||||  ||| ||| |||||||||  ||||||||||||||||| | |||||||||| ||| ||||    
T  14975252 ccttggcgcaaccggtaaagttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcctcttgtgtaaaaaacaagg 14975165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 378
Target Start/End: Original strand, 20400650 - 20400737
Alignment:
Q  291 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacac 378  Q
    ||||||||  ||| ||||||||||||  ||||||||  |||||||||  |||||||||| ||| | ||||||||||||| || |||||    
T  20400650 ttgttgtcatgtgactgaaaggtcacaggttcaagttatggaaacaatctcttgtgtaaaaaacagggtaagactgcgtacagtacac 20400737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 386
Target Start/End: Complemental strand, 24751176 - 24751131
Alignment:
Q  341 cttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatgg 386  Q
    ||||||||| ||||| ||||||||||||| |||||||| |||||||    
T  24751176 cttgtgtaaaaaatagggtaagactgcgtacaatacactaaaatgg 24751131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 382
Target Start/End: Original strand, 33138838 - 33138907
Alignment:
Q  313 tcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||| |||||||||||||||||||| |||||| ||| ||| |  ||||| | |||| ||||||||||||    
T  33138838 tcacgggttcaagtcctggaaacaacctcttgtataaaaaacagagtaaggccgcgtacaatacaccaaa 33138907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 309 - 349
Target Start/End: Original strand, 22967172 - 22967212
Alignment:
Q  309 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 349  Q
    ||||||||  ||||||||| |||||||||||||||||||||    
T  22967172 aaggtcactagttcaagtcatggaaacaacttcttgtgtaa 22967212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 309 - 349
Target Start/End: Complemental strand, 23821221 - 23821181
Alignment:
Q  309 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 349  Q
    ||||||||  ||||||||| |||||||||||||||||||||    
T  23821221 aaggtcactagttcaagtcatggaaacaacttcttgtgtaa 23821181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 286 - 382
Target Start/End: Complemental strand, 32728313 - 32728217
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||| ||||||||  ||| ||||||||||||   |||||||  |||||||||| |||| ||||| ||| | |||||||||| || ||||| ||||||    
T  32728313 taaagttgttgtcatgtgactgaaaggtcacagattcaagttttggaaacaacctcttatgtaaaaaacagggtaagactgtgtacaatataccaaa 32728217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 4e-21; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 263 - 391
Target Start/End: Complemental strand, 209107 - 208980
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 362  Q
    ||||||||||||||||||| || |||| ||||||||  ||| || |||||||||  ||||||||||||| |||||| |||||||||| ||| | ||||||    
T  209107 aagggggagccttggcgcagcggtaaagttgttgtcatgtgactaaaaggtcacaagttcaagtcctggcaacaacctcttgtgtaa-aaacagggtaag 209009  T
Q  363 actgcgtccaatacaccaaaatggcggga 391  Q
     |||| | |||||||||||||||| ||||    
T  209008 gctgcattcaatacaccaaaatggtggga 208980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 281 - 410
Target Start/End: Complemental strand, 28516596 - 28516467
Alignment:
Q  281 aacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacacca 380  Q
    |||| |||| |||||||| |||||||||||||||||| ||||||||| |||||||| | |||||||||| ||| | | || | |||||| ||||||| ||    
T  28516596 aacggtaaagttgttgtcaggtggctgaaaggtcacgggttcaagtcttggaaacatcctcttgtgtaaaaaacaggctagggctgcgtacaatacatca 28516497  T
Q  381 aaatggcgggagtctttctcagaccctgcg 410  Q
    |||||| ||||  | ||| |||||||||||    
T  28516496 aaatggtgggacccattcccagaccctgcg 28516467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 272 - 368
Target Start/End: Original strand, 23974744 - 23974840
Alignment:
Q  272 ccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcg 368  Q
    ||||||||||||| |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||||| |||||||||| ||| | |||||| |||||    
T  23974744 ccttggcgcaacggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaagagggtaaggctgcg 23974840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 272 - 414
Target Start/End: Original strand, 38879544 - 38879688
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||| ||| ||| | |||||| ||||||     
T  38879544 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgcgta 38879643  T
Q  371 caatacaccaa-aatggcgggagtctttctcagaccctgcgtatg 414  Q
    ||||||||||| ||||| ||||  | ||| | |||||||||||||    
T  38879644 caatacaccaataatggtgggaccccttcccggaccctgcgtatg 38879688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 272 - 382
Target Start/End: Original strand, 24448853 - 24448964
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | | |||||||| ||||| |||||| ||||||     
T  24448853 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatagggtaaggctgcgta 24448952  T
Q  371 caatacaccaaa 382  Q
    ||||||||||||    
T  24448953 caatacaccaaa 24448964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 263 - 348
Target Start/End: Original strand, 39301078 - 39301163
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgta 348  Q
    |||||||||||||||||||||| |||| ||||||||  ||  ||||||||||||| ||||||||| ||| |||||| |||||||||    
T  39301078 aagggggagccttggcgcaacggtaaagttgttgtcatgttactgaaaggtcacgggttcaagtcttgggaacaacctcttgtgta 39301163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 382
Target Start/End: Original strand, 35710276 - 35710385
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||  ||||||||||||| |||||||||||||||||| | |||||||||  ||||| |||||| ||||||     
T  35710276 ccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaatagggtaaggctgcgtt 35710373  T
Q  371 caatacaccaaa 382  Q
    ||||||||||||    
T  35710374 caatacaccaaa 35710385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 272 - 382
Target Start/End: Original strand, 41014282 - 41014392
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||||||     
T  41014282 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa-aaacagggtaaggctgcgta 41014380  T
Q  371 caatacaccaaa 382  Q
    ||||||||||||    
T  41014381 caatacaccaaa 41014392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 381
Target Start/End: Complemental strand, 4619278 - 4619168
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||| | | |||||||||| ||| | |||||| ||||||     
T  4619278 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaacagggtaaggctgcgta 4619179  T
Q  371 caatacaccaa 381  Q
    |||||||||||    
T  4619178 caatacaccaa 4619168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 305 - 383
Target Start/End: Complemental strand, 42924972 - 42924894
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 383  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||| ||| | ||||||  ||||| |||||||||||||    
T  42924972 ctgaaaggtcacgagttcaagtcctgaaaacaacatcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaaaa 42924894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 272 - 383
Target Start/End: Original strand, 43334165 - 43334278
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaagactgcgt 369  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | || ||||| || ||| | |||||| ||||||    
T  43334165 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaaacagggtaaggctgcgt 43334264  T
Q  370 ccaatacaccaaaa 383  Q
     |||||||||||||    
T  43334265 acaatacaccaaaa 43334278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 381
Target Start/End: Original strand, 27328730 - 27328825
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 381  Q
    |||| ||||||||  ||| ||||||||||||  ||||||||||||||||||   |||||||||| ||| | |||||| |||||| |||||||||||    
T  27328730 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa 27328825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 268 - 382
Target Start/End: Complemental strand, 19143117 - 19143004
Alignment:
Q  268 ggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgc 367  Q
    ||||||||||||||| | |||| ||||||||  ||| || ||| | |||  |||||||||||||||||||| |||||||||| ||| | |||||| ||||    
T  19143117 ggagccttggcgcaatggtaaaattgttgtcacgtgactaaaatgccacaggttcaagtcctggaaacaacctcttgtgtaa-aaacagggtaaggctgc 19143019  T
Q  368 gtccaatacaccaaa 382  Q
    || || |||||||||    
T  19143018 gtacagtacaccaaa 19143004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 305 - 383
Target Start/End: Original strand, 22187282 - 22187360
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 383  Q
    ||||||||||||  ||| |||||||||||||| | |||||||||| ||| | | ||||||||||| |||||||||||||    
T  22187282 ctgaaaggtcaccggtttaagtcctggaaacagcctcttgtgtaaaaaacatgataagactgcgtacaatacaccaaaa 22187360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 305 - 382
Target Start/End: Original strand, 32703421 - 32703496
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||||||| |||||||||||||||||| | |||||||||  ||| | |||||| |||||| ||||||||||||    
T  32703421 ctgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 32703496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 382
Target Start/End: Complemental strand, 8170154 - 8170045
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| | ||||||||||| |||||||||||||||||| | | |||||||  ||| | |||||| ||||||     
T  8170154 ccttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagccttttgtgta--aaacagggtaaggctgcgta 8170057  T
Q  371 caatacaccaaa 382  Q
    ||||||||||||    
T  8170056 caatacaccaaa 8170045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 338
Target Start/End: Complemental strand, 10634327 - 10634251
Alignment:
Q  262 aaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaac 338  Q
    ||||| ||||||||||||||||| | || ||||||||  ||| ||||||||||| | ||||||||||| ||||||||    
T  10634327 aaaggaggagccttggcgcaacggtgaagttgttgtcaagtgactgaaaggtcatgggttcaagtcctagaaacaac 10634251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 286 - 349
Target Start/End: Complemental strand, 37024711 - 37024648
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 349  Q
    |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | ||||||||||    
T  37024711 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa 37024648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 263 - 334
Target Start/End: Complemental strand, 39079946 - 39079875
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaa 334  Q
    ||||| |||||||||||||||| |||| ||||||||  ||| | ||||||||||| ||||||||| ||||||    
T  39079946 aagggtgagccttggcgcaacggtaaagttgttgtcatgtgacagaaaggtcacgggttcaagtcttggaaa 39079875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 311 - 382
Target Start/End: Original strand, 43574609 - 43574680
Alignment:
Q  311 ggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||||||||||||||||||||||||||  |||||||||  ||| | |||||| |||||| ||||| ||||||    
T  43574609 ggtcacgtgttcaagtcctggaaacaatctcttgtgtagaaaacagggtaaggctgcgtacaatataccaaa 43574680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 1565394 - 1565472
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 349  Q
    |||||||||||| | |||| ||||||||  ||| |||||||||| || |||||||||||||||||||| ||||| ||||    
T  1565394 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgagtaa 1565472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 414
Target Start/End: Original strand, 29334415 - 29334501
Alignment:
Q  328 ctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcgggagtctttctcagaccctgcgtatg 414  Q
    ||||||||| | |||||||||| ||| |||||||| |||||| |||||||||| ||||| ||||  | ||| | |||||||||||||    
T  29334415 ctggaaacagcctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccagaatggtgggacccattcccggaccctgcgtatg 29334501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 309 - 382
Target Start/End: Original strand, 1405188 - 1405261
Alignment:
Q  309 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||| |||||||||||||||||||| |||| | ||| |||||  |||||  ||||| ||||||||||||    
T  1405188 aaggtcacgggttcaagtcctggaaacaacctcttatataaaaaatagagtaagtttgcgtacaatacaccaaa 1405261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 312 - 381
Target Start/End: Original strand, 41425952 - 41426021
Alignment:
Q  312 gtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 381  Q
    |||||| |||||||| ||||||||||||| |||||||| ||| | |||||| |||| | |||||||||||    
T  41425952 gtcacgggttcaagttctggaaacaacttattgtgtaaaaaacagggtaaggctgcatacaatacaccaa 41426021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 414
Target Start/End: Complemental strand, 12006500 - 12006358
Alignment:
Q  274 ttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtg-ttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtcc 371  Q
    |||||||||| ||| || ||||||||  ||| ||||||||||||| | |||||||| |||||||||| |||| ||||| ||||| |||||| || | | |    
T  12006500 ttggcgcaactgctcaagttgttgtcatgtgactgaaaggtcacggggttcaagtc-tggaaacaacctcttatgtaaaaaatagggtaaggctccatac 12006402  T
Q  372 aatacaccaa-aatggcgggagtctttctcagaccctgcgtatg 414  Q
    |||||||||| ||||| ||||  | ||| |||||||||| ||||    
T  12006401 aatacaccaataatggtgggaccccttcccagaccctgcctatg 12006358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 381
Target Start/End: Complemental strand, 13801893 - 13801831
Alignment:
Q  319 gttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 381  Q
    ||||||||||||||| || | |||||||||| ||| | |||||| |||||| |||||||||||    
T  13801893 gttcaagtcctggaagcagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa 13801831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 381
Target Start/End: Original strand, 20135623 - 20135677
Alignment:
Q  327 cctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 381  Q
    |||||||||| | |||||||||| ||| |||||||| |||||| |||||||||||    
T  20135623 cctggaaacagcctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccaa 20135677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 349
Target Start/End: Original strand, 1850624 - 1850681
Alignment:
Q  292 tgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 349  Q
    |||||||  ||| ||||||||||||| |||||||||| ||||| ||| ||||||||||    
T  1850624 tgttgtcatgtgactgaaaggtcacgggttcaagtcccggaaataacctcttgtgtaa 1850681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 414
Target Start/End: Original strand, 2838732 - 2838883
Alignment:
Q  263 aagggggagccttggcgcaac-gctaaatttgttgtccggtggctg-aaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggta 360  Q
    |||||| | |||||||||||| | |||| ||||||||  ||| ||| |||||||||| | |||||||   |||||| | |||||||||| ||| | ||||    
T  2838732 aaggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgtaaaggtcacgaggtcaagtctcagaaacagcatcttgtgtaa-aaacagggta 2838830  T
Q  361 agactgcgtccaatacaccaaaatggcgggagtctttctcagaccctgcgtatg 414  Q
    || |||||| ||||||||| |||||| ||||  | ||||| |||||||||||||    
T  2838831 aggctgcgtacaatacacc-aaatggtgggatcccttctcggaccctgcgtatg 2838883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 362
Target Start/End: Original strand, 22025540 - 22025597
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 362  Q
    ||||||||||| | |||||||||||||||||| | |||||||||| ||| | ||||||    
T  22025540 ctgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaag 22025597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 381
Target Start/End: Complemental strand, 24903875 - 24903758
Alignment:
Q  264 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 363  Q
    ||||||||| ||| | ||||| |||||||||||||  ||| |||||| |||| | |  ||||||||| ||||| | | |||||||| ||||| |||||||    
T  24903875 agggggagctttgacacaacggtaaatttgttgtcacgtgactgaaaagtcatgggcacaagtcctgaaaacagccttttgtgtaaaaaatagggtaaga 24903776  T
Q  364 ctgcgtccaatacaccaa 381  Q
     || || |||| ||||||    
T  24903775 ttgtgtacaatccaccaa 24903758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 382
Target Start/End: Complemental strand, 34074700 - 34074623
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||||||  ||||||||||| |||||| | |||||||||| ||| |  |||||  ||||| ||||||||||||    
T  34074700 ctgaaaggtcacaagttcaagtcctagaaacagcctcttgtgtaaaaaacacagtaaggttgcgttcaatacaccaaa 34074623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 263 - 382
Target Start/End: Complemental strand, 32781468 - 32781349
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 362  Q
    |||||||| ||||||||||| | |||| ||||||    || |||||||||||||| |||||||||  ||||||||| |||||||||| ||| | ||||||    
T  32781468 aagggggaaccttggcgcaatggtaaagttgttgcaatgttgctgaaaggtcacgagttcaagtctcggaaacaacctcttgtgtaaaaaacagggtaag 32781369  T
Q  363 actgcgtccaatacaccaaa 382  Q
    ||||||| ||||||||||||    
T  32781368 actgcgtacaatacaccaaa 32781349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 263 - 383
Target Start/End: Original strand, 10543652 - 10543773
Alignment:
Q  263 aagggggagccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaa 361  Q
    |||||| | |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||  | |||||||||| ||| | |||||    
T  10543652 aaggggtaaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacggcctcttgtgtaaaaaacagggtaa 10543751  T
Q  362 gactgcgtccaatacaccaaaa 383  Q
    | |||||| |||||||||||||    
T  10543752 ggctgcgtacaatacaccaaaa 10543773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 387
Target Start/End: Complemental strand, 29420071 - 29419941
Alignment:
Q  261 taaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaata----a 356  Q
    ||||||||||| |||||  ||||| |||| ||||||||   || ||||||||||||| |||||||||||||||||||| |||||||||| ||| |    |    
T  29420071 taaagggggagtcttggtccaacggtaaagttgttgtcacatgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtgtaaaaaacagggta 29419972  T
Q  357 ggtaagactgcgtccaatacaccaaaatggc 387  Q
     ||||| |||||| |||||||||||||||||    
T  29419971 agtaaggctgcgtacaatacaccaaaatggc 29419941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 264 - 392
Target Start/End: Complemental strand, 44521552 - 44521425
Alignment:
Q  264 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 363  Q
    |||||||||||||||| |||| |||| ||||| ||  ||| ||||||||||||| |||||| || |||||||||  |||||||||| ||| ||||||||     
T  44521552 agggggagccttggcggaacggtaaagttgttatcacgtgactgaaaggtcacgcgttcaaatcttggaaacaatctcttgtgtaaaaaacaaggtaagg 44521453  T
Q  364 ctgcgtccaatacaccaaaatggcgggag 392  Q
    |||| |  |||||||| ||||||||||||    
T  44521452 ctgcatataatacacc-aaatggcgggag 44521425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 268 - 382
Target Start/End: Original strand, 5450245 - 5450360
Alignment:
Q  268 ggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaagactg 366  Q
    |||||||||| ||| || |||| ||||||||  ||| ||||||||||||| |||||| ||||||||||||| |||||||| || ||| | |||||| |||    
T  5450245 ggagccttggtgcagcgttaaagttgttgtcatgtgactgaaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaaacatggtaaggctg 5450344  T
Q  367 cgtccaatacaccaaa 382  Q
    ||| ||||||||||||    
T  5450345 cgtacaatacaccaaa 5450360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 272 - 382
Target Start/End: Complemental strand, 12024090 - 12023980
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||||||     
T  12024090 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa-aaacagggtaaggctgcgta 12023992  T
Q  371 caatacaccaaa 382  Q
    ||||||||||||    
T  12023991 caatacaccaaa 12023980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 286 - 383
Target Start/End: Complemental strand, 24200782 - 24200685
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 383  Q
    |||| ||||||||  ||| |||||| |||||| |||||||||||||||||| | |||||||||| ||| | |||||| |||||| |||||||||||||    
T  24200782 taaagttgttgtcatgtgactgaaaagtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaa 24200685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 265 - 381
Target Start/End: Complemental strand, 4516529 - 4516413
Alignment:
Q  265 gggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagac 364  Q
    |||||||||||||||||||| |||| ||||||||  ||| |||||||||||| | ||||||| || |||||| | |||||||||| ||| | || ||  |    
T  4516529 gggggagccttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacatattcaagttctagaaacagcctcttgtgtaaaaaacagggcaacgc 4516430  T
Q  365 tgcgtccaatacaccaa 381  Q
    ||||| |||||||||||    
T  4516429 tgcgtacaatacaccaa 4516413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 414
Target Start/End: Original strand, 14530281 - 14530425
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||| ||| ||| | |||||| || |||     
T  14530281 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctacgta 14530380  T
Q  371 caatacaccaa-aatggcgggagtctttctcagaccctgcgtatg 414  Q
    ||||||||||| ||||| ||||  | ||| | |||||||||||||    
T  14530381 caatacaccaataatggtgggaccccttcccggaccctgcgtatg 14530425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 272 - 382
Target Start/End: Complemental strand, 8455488 - 8455377
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||||||| | | | |||||| ||||||     
T  8455488 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacacagggtaaggctgcgta 8455389  T
Q  371 caatacaccaaa 382  Q
    ||||||||||||    
T  8455388 caatacaccaaa 8455377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 272 - 382
Target Start/End: Original strand, 11514399 - 11514510
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||| ||||||||||| | |||||||||| ||| || ||||| ||||||     
T  11514399 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaactcctggaaacagcctcttgtgtaaaaaacaaagtaaggctgcgta 11514498  T
Q  371 caatacaccaaa 382  Q
    ||||||||||||    
T  11514499 caatacaccaaa 11514510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 266 - 382
Target Start/End: Complemental strand, 99440 - 99326
Alignment:
Q  266 ggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagact 365  Q
    ||||||||||||||||||  |||| ||||||||  ||| ||||||||||||| ||||||||||| |||||| | |||  ||||| ||| | || ||| ||    
T  99440 ggggagccttggcgcaacagtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctagaaacagcctct--tgtaaaaaacatggcaaggct 99343  T
Q  366 gcgtccaatacaccaaa 382  Q
    |||| ||||||||||||    
T  99342 gcgtacaatacaccaaa 99326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 286 - 382
Target Start/End: Original strand, 17667980 - 17668076
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||| ||||||||  ||| ||| ||||||||| |||||||||||||||| ||| |||||||||| ||  | |||||| |||||| ||||||||||||    
T  17667980 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaagaacctcttgtgtaaaaatcagggtaaggctgcgtacaatacaccaaa 17668076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 263 - 414
Target Start/End: Complemental strand, 15296589 - 15296436
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtg--ttcaagtcctggaaacaacttcttgtgtaagaaataaggta 360  Q
    ||||||||||||||||| |||| |||| |||||||    |||||||||| ||| |||  ||||||||| ||||||| | | |||||||| | | | ||||    
T  15296589 aagggggagccttggcggaacggtaaagttgttgttacatggctgaaagatcatgtgggttcaagtcccggaaacagcctgttgtgtaaaatacagggta 15296490  T
Q  361 agactgcgtccaatacaccaaaatggcgggagtctttctcagaccctgcgtatg 414  Q
    || |||||| ||||| |||||||| | ||||  | ||||| |||||||||||||    
T  15296489 aggctgcgtacaatataccaaaatagtgggatcccttctcggaccctgcgtatg 15296436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 348
Target Start/End: Complemental strand, 17380416 - 17380331
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgta 348  Q
    |||||||||||||||||||| |   || ||||||||  ||| | ||||||||||| ||||||||| |||||||||| |||||||||    
T  17380416 aagggggagccttggcgcaatggcgaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcttggaaacaacctcttgtgta 17380331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 309 - 382
Target Start/End: Original strand, 17623565 - 17623638
Alignment:
Q  309 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||| ||||||||||| |||||||| |||||||||| ||  | |||||| |||||| ||||||||||||    
T  17623565 aaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaaaatcagggtaaggctgcgtacaatacaccaaa 17623638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 286 - 414
Target Start/End: Original strand, 17896237 - 17896365
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaagactgcgtccaatacaccaaaat 384  Q
    |||| ||||||||  ||| | |||||||||||  |||||||||| |||||||| |||||||| || ||||| |||||| |||||| ||||| ||| ||||    
T  17896237 taaagttgttgtcatgtgaccgaaaggtcacggattcaagtcctagaaacaacctcttgtgtaaaaaaatagggtaaggctgcgtacaatatacc-aaat 17896335  T
Q  385 ggcgggagtctttctcagaccctgcgtatg 414  Q
    || ||||  | ||||| |||||||||||||    
T  17896336 ggtgggaccccttctcggaccctgcgtatg 17896365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 286 - 382
Target Start/End: Original strand, 23397744 - 23397838
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||| ||||||||  ||| ||||||||||| | |||||||||||||||||| | |||||||||  ||||| |||||| || ||| ||||||||||||    
T  23397744 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgta--aaatagggtaaggctacgtacaatacaccaaa 23397838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 381
Target Start/End: Original strand, 19614989 - 19615065
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 381  Q
    ||||||||||||| ||||||||||| |||||| | |||||| ||| ||| | ||||||||||||| ||||| |||||    
T  19614989 ctgaaaggtcacgggttcaagtccttgaaacatcctcttgtataaaaaacagggtaagactgcgtacaatataccaa 19615065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 382
Target Start/End: Original strand, 10546159 - 10546237
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||||||| |||||||||||||||||| | |||||| | || ||| | |||||| |||||| ||||||||||||    
T  10546159 ctgaaaggtcacgggttcaagtcctggaaacatcctcttgtataaaaaaacagggtaaggctgcgtacaatacaccaaa 10546237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 44604830 - 44604895
Alignment:
Q  284 gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 349  Q
    |||||| ||||||||  ||| ||| ||||||||  |||||||||||||||||||| ||||||||||    
T  44604830 gctaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacaacctcttgtgtaa 44604895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 382
Target Start/End: Complemental strand, 21779411 - 21779322
Alignment:
Q  291 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||  ||| ||||||||||||| |||||||||||||| ||| | |||||||||  ||| | ||||||  ||||| ||||||||||||    
T  21779411 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggagacagcctcttgtgta--aaacagggtaaggttgcgtacaatacaccaaa 21779322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 369
Target Start/End: Original strand, 33795258 - 33795346
Alignment:
Q  281 aacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgt 369  Q
    |||| |||| ||||||||  |||  |||||||||||| |||||||||| ||||||||| ||||| |||| ||| | |||||| ||||||    
T  33795258 aacggtaaagttgttgtcacgtgattgaaaggtcacgggttcaagtcccggaaacaacctcttgggtaaaaaacagggtaaggctgcgt 33795346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 377
Target Start/End: Original strand, 5841006 - 5841097
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaataca 377  Q
    |||| ||||||||  ||| ||| ||||||||| ||||||||||| |||||| | | |||||||| ||||| ||||||  ||||| |||||||    
T  5841006 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctagaaacagccttttgtgtaaaaaatagggtaaggatgcgtacaataca 5841097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 382
Target Start/End: Complemental strand, 12315787 - 12315713
Alignment:
Q  307 gaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||||| ||||||||| |||||||| |||||| | ||| ||| | |||||||||| || ||||||||||||    
T  12315787 gaaaggtcacgagttcaagtcatggaaacagcttcttat-taaaaaacagggtaagactgtgtacaatacaccaaa 12315713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 382
Target Start/End: Complemental strand, 19977850 - 19977775
Alignment:
Q  307 gaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||||| |||||||| ||||||||| | |||| ||||| ||||| | ||||  ||||| ||||||||||||    
T  19977850 gaaaggtcacgggttcaagttctggaaacagcctcttttgtaaaaaataggataaggttgcgtacaatacaccaaa 19977775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 381
Target Start/End: Complemental strand, 23145874 - 23145760
Alignment:
Q  266 ggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagact 365  Q
    |||||||||||||| | || |||| |||||||   ||| ||||||||||||| ||||||||| || |||||   |||||||||| ||| |  ||||| ||    
T  23145874 ggggagccttggcgta-cggtaaagttgttgtagcgtgactgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgtaaggct 23145776  T
Q  366 gcgtccaatacaccaa 381  Q
    |||| |||||||||||    
T  23145775 gcgtacaatacaccaa 23145760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 381
Target Start/End: Complemental strand, 23557664 - 23557550
Alignment:
Q  266 ggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagact 365  Q
    |||||||||||||| | || |||| |||||||   ||| ||||||||||||| ||||||||| || |||||   |||||||||| ||| |  ||||| ||    
T  23557664 ggggagccttggcgta-cggtaaagttgttgtagcgtgactgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgtaaggct 23557566  T
Q  366 gcgtccaatacaccaa 381  Q
    |||| |||||||||||    
T  23557565 gcgtacaatacaccaa 23557550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 381
Target Start/End: Complemental strand, 40417028 - 40416933
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 381  Q
    |||| ||||||||  ||| ||| ||||||||| ||||||||| |||||||||| |||||| ||| ||| | || ||| ||| || |||||||||||    
T  40417028 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcatggaaacaacctcttgtataaaaaacagggaaaggctgtgtacaatacaccaa 40416933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 309 - 347
Target Start/End: Complemental strand, 13245220 - 13245182
Alignment:
Q  309 aaggtcacgtgttcaagtcctggaaacaacttcttgtgt 347  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  13245220 aaggtcacgagttcaagtcctggaaacaacctcttgtgt 13245182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 263 - 382
Target Start/End: Complemental strand, 31821518 - 31821404
Alignment:
Q  263 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 362  Q
    |||||||||||||||||||||| || | ||||| |   ||| ||||||||||||| ||||||||| | |||||| |  | ||||||| ||||| ||||||    
T  31821518 aagggggagccttggcgcaacggtatagttgttat---gtgactgaaaggtcacgagttcaagtcgtagaaacagc--cgtgtgtaaaaaatagggtaag 31821424  T
Q  363 actgcgtccaatacaccaaa 382  Q
      || || ||||||||||||    
T  31821423 gttgtgtacaatacaccaaa 31821404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 267 - 336
Target Start/End: Original strand, 35017776 - 35017846
Alignment:
Q  267 gggagccttggcgcaacgctaaatttgttgtccggtggc-tgaaaggtcacgtgttcaagtcctggaaaca 336  Q
    |||||||||||||||||| |||| ||||||||  ||| | |||||||||||| ||| |||||||| |||||    
T  35017776 gggagccttggcgcaacggtaaagttgttgtcatgtgacttgaaaggtcacgggtttaagtcctgaaaaca 35017846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 383
Target Start/End: Original strand, 7214512 - 7214609
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 383  Q
    |||| ||||||||  ||| ||||||||||| | ||||||||| ||||||||   |||||||||| | | | |||||| |||||| |||||||| ||||    
T  7214512 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaatacagggtaaggctgcgtacaatacacaaaaa 7214609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 382
Target Start/End: Original strand, 9671143 - 9671253
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctg-aaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgt 369  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||| |||||| |||||| ||||||||||| | |||||||||  ||| | |||||| ||||||    
T  9671143 ccttggcgcaaccggtaaagttgttgtcatgtgactggaaatgtcacgggttcaaatcctggaaacagcctcttgtgta--aaacagggtaaggctgcgt 9671240  T
Q  370 ccaatacaccaaa 382  Q
     ||||||||||||    
T  9671241 acaatacaccaaa 9671253  T

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Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 382
Target Start/End: Original strand, 14444730 - 14444802
Alignment:
Q  309 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||| || | ||||||||||    
T  14444730 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaa-aaacagggtaaggctgtgtacgatacaccaaa 14444802  T

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Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 286 - 382
Target Start/End: Complemental strand, 25249894 - 25249799
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||| ||||||||  ||| ||| ||||||||| ||||||||| ||||||||   |||||||||  ||| | |||||| |||||| ||||||||||||    
T  25249894 taaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatggaaacagtctcttgtgtac-aaacagggtaaggctgcgtacaatacaccaaa 25249799  T

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Target: scaffold0049 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 305 - 383
Target Start/End: Original strand, 58974 - 59052
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 383  Q
    ||||||||||||| |||||||||||||||||| | |||||| ||| ||| | ||||||||||||| |||||||||||||    
T  58974 ctgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaagactgcgtacaatacaccaaaa 59052  T

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Target: scaffold0258 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 272 - 414
Target Start/End: Complemental strand, 13195 - 13054
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||  |||||||||||||||||| | ||||| |||| ||| |||||||| ||||||     
T  13195 ccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgcgtaa-aaacaaggtaaggctgcgta 13097  T
Q  371 caatacaccaaaatggcgggagtctttctcagaccctgcgtatg 414  Q
    |||||||||  ||||| ||||  | ||| |||||||||||||||    
T  13096 caatacacc-gaatggtgggaccccttcccagaccctgcgtatg 13054  T

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Target: scaffold0187 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 382
Target Start/End: Complemental strand, 10205 - 10111
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||  ||| |  |||||||||||| ||||||||||||    
T  10205 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacagagtaagactgcgtacaatacaccaaa 10111  T

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Target: scaffold0187; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 382
Target Start/End: Complemental strand, 20533 - 20439
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||  ||| |  |||||||||||| ||||||||||||    
T  20533 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacagagtaagactgcgtacaatacaccaaa 20439  T

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Target: scaffold0057 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 382
Target Start/End: Original strand, 46832 - 46905
Alignment:
Q  309 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||| |||||||| ||||||||||| |||||||||| ||||| ||||||  ||||| ||||||||||||    
T  46832 aaggtcacgggttcaagtgctggaaacaacctcttgtgtaaaaaatagggtaaggttgcgtacaatacaccaaa 46905  T

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Target: scaffold0057; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 331
Target Start/End: Complemental strand, 47065 - 46995
Alignment:
Q  261 taaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctgg 331  Q
    ||||||| ||||||||||||||   |||| |||||||| |||| ||||||||||||| |||||||||||||    
T  47065 taaagggagagccttggcgcaatagtaaagttgttgtcaggtgactgaaaggtcacgagttcaagtcctgg 46995  T

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Target: scaffold0311 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 382
Target Start/End: Original strand, 10788 - 10884
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    |||| ||||||||  ||| ||| ||||||||| |||||||  ||| ||||||| |||||||||| ||| | |||| | |||||||||||||||||||    
T  10788 taaagttgttgtcatgtgactggaaggtcacgggttcaaggtctgaaaacaacctcttgtgtaaaaaacagggtagggctgcgtccaatacaccaaa 10884  T

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Target: scaffold0254 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 4154 - 4198
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 349  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||    
T  4154 ctgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaa 4198  T

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Target: scaffold0168 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 382
Target Start/End: Original strand, 30542 - 30651
Alignment:
Q  272 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 370  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||  |||||||||||||||||| | |||||||||  ||| | |||| | ||||||     
T  30542 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgtgta--aaacagggtagggctgcgta 30639  T
Q  371 caatacaccaaa 382  Q
    ||||||||||||    
T  30640 caatacaccaaa 30651  T

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Target: scaffold0223 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 382
Target Start/End: Original strand, 11128 - 11203
Alignment:
Q  305 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 382  Q
    ||||||||||||| |||||||||||||||||| | |||||||||  ||| || ||||| |||| | ||||||||||||    
T  11128 ctgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacaaagtaaggctgcttacaatacaccaaa 11203  T

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Target: scaffold1176 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 349
Target Start/End: Complemental strand, 1742 - 1679
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 349  Q
    |||| ||||||||  ||| ||||||||||| | |||||||||||| ||||||| ||||||||||    
T  1742 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacaacctcttgtgtaa 1679  T

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Target: scaffold0116 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 349
Target Start/End: Original strand, 8869 - 8932
Alignment:
Q  286 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 349  Q
    |||| ||||||||  ||| ||| ||||||||  |||||| ||||||||||||||||||||||||    
T  8869 taaagttgttgtcatgtgactgtaaggtcacaggttcaattcctggaaacaacttcttgtgtaa 8932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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