View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10205_high_1 (Length: 371)
Name: NF10205_high_1
Description: NF10205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10205_high_1 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 351; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 1 - 371
Target Start/End: Original strand, 39744706 - 39745076
Alignment:
| Q |
1 |
atctttactttgtgaaagcagaaaaatccacaccatgtggcttaccagcaagaagtgtattaacaagttactacaaaagcaaacatttcaaatgcagaac |
100 |
Q |
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| T |
39744706 |
atctttactttgtgaaagcagaaaaatccacaccatgtggcttaccagcaagaagtgtattaacaagttactacaaaagcaaacatttcaaatgcagaac |
39744805 |
T |
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| Q |
101 |
acacgacccgtggaatgatttcacaagccctgaccaaaccattctctgcaatgacattaaccaaaggatgcattgccaactcctagcaggcctaattcac |
200 |
Q |
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| T |
39744806 |
acatgacccgtggaatgatttcacaagccctgaccaaaccattctctgcaatgacattaaccaaagcatgcattgccaactcctagcaggcctaattcac |
39744905 |
T |
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| Q |
201 |
cgtcgtcaagttctaaggctaggcgccgtctttgcttcagcatttctaagagcaatttcatttcttgaacgtaattggagaaaactatgtgatgacataa |
300 |
Q |
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| T |
39744906 |
cgtcgtcaagttctaaggctaggtgccgtctttgcttcagcatttctaagagcaatttcatttcttgaacgtaattggagaaaactatgtgatgacataa |
39745005 |
T |
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| Q |
301 |
gaaatggacaattaagttcctttataacagacccttcatgtcgttcatcgatgtctacactactctcatct |
371 |
Q |
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| T |
39745006 |
gaaatggacaattaaattcctttataacagacccttcatgtcgttcatcgatgtctacactactttcatct |
39745076 |
T |
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