View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10205_low_10 (Length: 250)

Name: NF10205_low_10
Description: NF10205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10205_low_10
NF10205_low_10
[»] chr5 (39 HSPs)
chr5 (14-101)||(42851995-42852082)
chr5 (18-101)||(22201962-22202045)
chr5 (32-101)||(11991296-11991365)
chr5 (32-101)||(29922215-29922284)
chr5 (7-101)||(2670041-2670135)
chr5 (32-101)||(2878702-2878771)
chr5 (32-101)||(10537245-10537314)
chr5 (24-101)||(12467247-12467324)
chr5 (32-101)||(43010626-43010695)
chr5 (9-101)||(1576599-1576690)
chr5 (9-101)||(1608125-1608216)
chr5 (14-82)||(17128251-17128319)
chr5 (40-91)||(1473355-1473406)
chr5 (9-101)||(6150349-6150437)
chr5 (46-100)||(41534628-41534682)
chr5 (34-91)||(7984098-7984155)
chr5 (32-101)||(12987040-12987109)
chr5 (32-101)||(13060628-13060697)
chr5 (32-101)||(22573644-22573713)
chr5 (52-101)||(24030226-24030275)
chr5 (9-101)||(1372019-1372111)
chr5 (32-100)||(3520530-3520597)
chr5 (5-85)||(14243787-14243867)
chr5 (32-88)||(26002988-26003044)
chr5 (46-101)||(17657247-17657302)
chr5 (46-101)||(28625485-28625540)
chr5 (46-101)||(40452504-40452559)
chr5 (5-88)||(42558759-42558841)
chr5 (46-101)||(42706801-42706856)
chr5 (57-91)||(31637130-31637164)
chr5 (32-89)||(11163307-11163364)
chr5 (9-70)||(13739343-13739404)
chr5 (24-101)||(40152902-40152979)
chr5 (52-101)||(43265967-43266016)
chr5 (32-101)||(43318994-43319063)
chr5 (17-101)||(341966-342050)
chr5 (57-101)||(1868862-1868906)
chr5 (33-101)||(30852163-30852231)
chr5 (17-85)||(41059708-41059775)
[»] chr4 (28 HSPs)
chr4 (9-83)||(29877607-29877681)
chr4 (9-101)||(23297406-23297498)
chr4 (19-88)||(29996678-29996747)
chr4 (9-101)||(43699509-43699601)
chr4 (19-101)||(948050-948132)
chr4 (32-101)||(3564211-3564280)
chr4 (9-82)||(18424322-18424395)
chr4 (32-101)||(27368178-27368247)
chr4 (45-101)||(55638107-55638163)
chr4 (33-90)||(8130480-8130537)
chr4 (9-89)||(42611905-42611986)
chr4 (5-101)||(35124351-35124447)
chr4 (46-101)||(896975-897030)
chr4 (36-91)||(12495682-12495737)
chr4 (46-101)||(28074370-28074425)
chr4 (9-100)||(43415316-43415407)
chr4 (46-91)||(7148777-7148822)
chr4 (9-77)||(10796354-10796422)
chr4 (9-101)||(33533896-33533988)
chr4 (30-101)||(35010200-35010271)
chr4 (31-82)||(43740120-43740171)
chr4 (32-90)||(38515689-38515747)
chr4 (32-101)||(212974-213042)
chr4 (32-85)||(38345863-38345916)
chr4 (57-101)||(4331353-4331397)
chr4 (9-85)||(34526248-34526323)
chr4 (9-77)||(34633367-34633435)
chr4 (45-101)||(46650275-46650331)
[»] chr8 (24 HSPs)
chr8 (32-90)||(13131421-13131479)
chr8 (3-101)||(32131402-32131500)
chr8 (32-89)||(16972395-16972452)
chr8 (32-101)||(19327858-19327926)
chr8 (30-101)||(4326239-4326310)
chr8 (46-101)||(28879063-28879118)
chr8 (31-101)||(34102712-34102783)
chr8 (46-101)||(35453415-35453470)
chr8 (45-91)||(13265488-13265534)
chr8 (32-101)||(31459037-31459106)
chr8 (46-91)||(34286599-34286644)
chr8 (38-86)||(11988194-11988242)
chr8 (46-90)||(32213059-32213103)
chr8 (57-101)||(35168467-35168511)
chr8 (46-101)||(32975692-32975747)
chr8 (46-101)||(34338426-34338481)
chr8 (7-88)||(1088917-1088998)
chr8 (32-85)||(7638514-7638567)
chr8 (32-101)||(16706126-16706195)
chr8 (32-101)||(16926758-16926827)
chr8 (45-101)||(1089017-1089073)
chr8 (9-101)||(14942392-14942484)
chr8 (65-101)||(23412758-23412794)
chr8 (46-86)||(29243104-29243144)
[»] chr7 (24 HSPs)
chr7 (36-101)||(34922926-34922991)
chr7 (9-100)||(38372526-38372617)
chr7 (9-101)||(29390576-29390668)
chr7 (37-101)||(41677370-41677434)
chr7 (19-86)||(21249134-21249201)
chr7 (32-88)||(12473197-12473253)
chr7 (32-100)||(23119947-23120015)
chr7 (9-101)||(30181518-30181610)
chr7 (6-101)||(24414488-24414583)
chr7 (46-101)||(42083443-42083498)
chr7 (35-101)||(7098126-7098192)
chr7 (32-101)||(44613499-44613568)
chr7 (32-101)||(48021673-48021742)
chr7 (9-101)||(22319317-22319409)
chr7 (9-101)||(40629443-40629534)
chr7 (9-88)||(18837190-18837269)
chr7 (32-91)||(23356527-23356586)
chr7 (46-101)||(29378650-29378705)
chr7 (31-101)||(39803014-39803084)
chr7 (46-88)||(47511048-47511090)
chr7 (64-101)||(14536905-14536942)
chr7 (60-101)||(14691325-14691366)
chr7 (46-91)||(33288135-33288180)
chr7 (32-88)||(9546423-9546479)
[»] chr2 (22 HSPs)
chr2 (32-101)||(34913416-34913485)
chr2 (24-101)||(21788440-21788517)
chr2 (6-101)||(4026891-4026985)
chr2 (32-101)||(33321338-33321407)
chr2 (11-91)||(4090459-4090539)
chr2 (5-101)||(25836738-25836834)
chr2 (33-101)||(37409635-37409703)
chr2 (5-101)||(37419990-37420085)
chr2 (45-90)||(29133704-29133749)
chr2 (32-101)||(33321429-33321498)
chr2 (8-101)||(35515506-35515599)
chr2 (57-101)||(42839346-42839390)
chr2 (46-101)||(887417-887472)
chr2 (32-83)||(27703502-27703553)
chr2 (52-91)||(35731149-35731188)
chr2 (35-101)||(5516069-5516135)
chr2 (59-101)||(12442831-12442873)
chr2 (32-82)||(15155804-15155854)
chr2 (67-101)||(33555685-33555719)
chr2 (15-91)||(2790106-2790183)
chr2 (32-101)||(8441464-8441533)
chr2 (32-88)||(755781-755837)
[»] chr6 (21 HSPs)
chr6 (35-101)||(30533974-30534040)
chr6 (46-101)||(10054386-10054441)
chr6 (5-90)||(9201768-9201853)
chr6 (32-88)||(2040225-2040281)
chr6 (46-101)||(2034255-2034310)
chr6 (30-101)||(4272371-4272442)
chr6 (38-101)||(22816611-22816674)
chr6 (35-101)||(3211027-3211093)
chr6 (3-101)||(8014751-8014848)
chr6 (32-101)||(29623503-29623572)
chr6 (60-101)||(34509931-34509972)
chr6 (52-91)||(1240647-1240686)
chr6 (46-101)||(2027202-2027257)
chr6 (46-101)||(12817118-12817173)
chr6 (32-101)||(6632650-6632719)
chr6 (32-101)||(6758618-6758687)
chr6 (46-91)||(10755316-10755361)
chr6 (32-88)||(2255725-2255781)
chr6 (57-101)||(7267791-7267835)
chr6 (9-69)||(10658304-10658364)
chr6 (9-101)||(24625819-24625911)
[»] chr3 (26 HSPs)
chr3 (32-101)||(7292671-7292740)
chr3 (32-101)||(11528882-11528951)
chr3 (32-101)||(40581103-40581172)
chr3 (9-101)||(21296734-21296826)
chr3 (9-101)||(22809219-22809312)
chr3 (32-101)||(53218066-53218135)
chr3 (9-101)||(29270329-29270421)
chr3 (33-101)||(32901174-32901242)
chr3 (9-101)||(34707739-34707831)
chr3 (37-101)||(43971873-43971937)
chr3 (32-101)||(10448765-10448834)
chr3 (52-101)||(10521165-10521214)
chr3 (52-101)||(10667409-10667458)
chr3 (9-78)||(23555452-23555521)
chr3 (38-91)||(24842143-24842196)
chr3 (52-101)||(52421167-52421216)
chr3 (32-83)||(10272113-10272164)
chr3 (46-101)||(43079960-43080015)
chr3 (46-101)||(52021251-52021306)
chr3 (38-88)||(36266241-36266291)
chr3 (52-101)||(3845866-3845915)
chr3 (24-101)||(27769629-27769705)
chr3 (38-86)||(4257342-4257390)
chr3 (45-101)||(5129841-5129897)
chr3 (45-101)||(30198982-30199038)
chr3 (9-73)||(50022010-50022074)
[»] chr1 (28 HSPs)
chr1 (5-101)||(28689966-28690064)
chr1 (31-101)||(18327514-18327584)
chr1 (9-97)||(391136-391225)
chr1 (32-101)||(10365162-10365231)
chr1 (32-101)||(10850097-10850166)
chr1 (32-101)||(20169255-20169324)
chr1 (9-101)||(1265719-1265811)
chr1 (24-99)||(49738328-49738404)
chr1 (46-101)||(6337782-6337837)
chr1 (38-101)||(37712065-37712127)
chr1 (52-101)||(4068126-4068175)
chr1 (32-101)||(35897649-35897718)
chr1 (9-101)||(10082218-10082310)
chr1 (57-101)||(15515373-15515417)
chr1 (35-91)||(41003381-41003437)
chr1 (57-101)||(41196736-41196780)
chr1 (38-101)||(26542970-26543033)
chr1 (32-91)||(35590121-35590180)
chr1 (46-101)||(36423007-36423062)
chr1 (38-101)||(46501027-46501090)
chr1 (46-101)||(51409733-51409788)
chr1 (63-101)||(39941463-39941501)
chr1 (32-101)||(15631895-15631964)
chr1 (32-85)||(16225500-16225553)
chr1 (5-101)||(26946130-26946227)
chr1 (52-101)||(26988159-26988208)
chr1 (52-88)||(16889004-16889040)
chr1 (32-80)||(46689597-46689645)
[»] scaffold0157 (1 HSPs)
scaffold0157 (36-91)||(24740-24795)
[»] scaffold0332 (1 HSPs)
scaffold0332 (52-101)||(14772-14821)
[»] scaffold0012 (1 HSPs)
scaffold0012 (39-86)||(178498-178545)
[»] scaffold1088 (1 HSPs)
scaffold1088 (32-101)||(1285-1354)
[»] scaffold0048 (1 HSPs)
scaffold0048 (52-101)||(58894-58943)
[»] scaffold1367 (1 HSPs)
scaffold1367 (32-88)||(1049-1105)


Alignment Details
Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 42851995 - 42852082
Alignment:
Q  14 attggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||| ||||||| ||||||||||||  ||||  |||| ||||||||||||||||||||||||||| ||||||| |||||||||    
T  42851995 attggcttatttttgggcttatgcaaaacagcttattcaaataaataagcttttatgtattattcataagcttgtcaagatagtttat 42852082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 22202045 - 22201962
Alignment:
Q  18 gcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| ||||| | ||||||||||||  ||||| |||| ||||||||||||||||||||||||||| |||||||  ||||||||    
T  22202045 gcttatttttgagcttatgcaaaacagcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttat 22201962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 11991296 - 11991365
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||||| ||||| |||| ||||| ||||||    
T  11991296 ttatgcaaaacaacttatgtaaataaataagcttttatgtattatttataagcttgtaaatatggtttat 11991365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 29922284 - 29922215
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||||||||| |||||| |||| |||||| |||||||||||||||||||| |||||||  ||||||||    
T  29922284 ttatgcaaaacagtttatgcaaataaataagtttttatgtattattcataagcttgtcaaggtagtttat 29922215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 101
Target Start/End: Original strand, 2670041 - 2670135
Alignment:
Q  7 catttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||||||| ||||  ||||| | ||||| |||||| |||||| |||| || || |||||||||| ||||||||||||||||||  ||||||||    
T  2670041 catttgaattcgcttgtttttgagcttatgtaaaacagtttatgcaaataaacaatcttttatgtactattcataagtttgtcaaggtagtttat 2670135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 2878771 - 2878702
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||| |||||  ||||| |||| ||||||||||||| |||||||||||||||||||||| | ||||||    
T  2878771 ttatgctaaacagcttatgcaaataaataagcttttatctattattcataagtttgtcaatgtggtttat 2878702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 10537314 - 10537245
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| ||||||  ||||| |||| ||||||||||||||||||||| ||||| ||||||| |||||||||    
T  10537314 ttatgtaaaacagcttatgcaaataaataagcttttatgtattatttataagcttgtcaagatagtttat 10537245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 12467247 - 12467324
Alignment:
Q  24 ttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| |||||| ||||| |  ||||| |||| ||||||||||||||||||||||||||| |||||||  ||||||||    
T  12467247 ttttgagtttattcaaaaaatgttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttat 12467324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 43010626 - 43010695
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| ||||||| ||||| |||| ||||| ||||||||||||||||||| |||||||| | ||||||||    
T  43010626 ttatgtaaaacaacttatgtaaataaataaacttttatgtattattcatacgtttgtcattgtagtttat 43010695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 1576599 - 1576690
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| ||||||||| | ||||| ||||||||||||  ||| | |||| ||||| |||||||||||| |||||||| |||||||| ||||||||    
T  1576599 tttggattggcttattcttgggcttatgcaaaacagcttaagcaaataaataaacttttatgtatt-ttcataagcttgtcaatgtagtttat 1576690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 1608216 - 1608125
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| ||||||||| | ||||| ||||||||||||  ||| | |||| ||||| |||||||||||| |||||||| |||||||| ||||||||    
T  1608216 tttggattggcttattcttgggcttatgcaaaacagcttaagcaaataaataaacttttatgtatt-ttcataagcttgtcaatgtagtttat 1608125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 17128251 - 17128319
Alignment:
Q  14 attggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataa 82  Q
    |||| |||| ||||| | ||||||||||||  ||||| |||| ||||||||||||||||||||||||||    
T  17128251 attgacttatttttgagcttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataa 17128319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 1473355 - 1473406
Alignment:
Q  40 aacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaa 91  Q
    ||||| ||||| |||| ||||||||||||||||||||||||||| |||||||    
T  1473355 aacaacttatgcaaataaataagcttttatgtattattcataagcttgtcaa 1473406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 6150349 - 6150437
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||  |||| ||||| ||||||||||||||  ||||| ||||||    | ||||||||||||||||||||||||||||  ||||||||    
T  6150349 tttgaattcacttatttttgagtttatgcaaaacagcttatgcaaatga----ggttttatgtattattcataagtttgtcaaggtagtttat 6150437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 41534628 - 41534682
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagttta 100  Q
    ||||| |||| ||||||||||||||||||||||||||| |||||||  |||||||    
T  41534628 ttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagttta 41534682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 7984098 - 7984155
Alignment:
Q  34 atgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaa 91  Q
    ||||| ||||| ||||| |||| | |||| ||||||||||||||||||||||||||||    
T  7984098 atgcataacaacttatgcaaataactaagtttttatgtattattcataagtttgtcaa 7984155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 12987109 - 12987040
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| |||| || ||||| |||| |||||||||||||||||| |||||||| |||||||  ||||||||    
T  12987109 ttatgtaaaagaacttatgcaaataaataagcttttatgtattgttcataagcttgtcaaggtagtttat 12987040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 13060697 - 13060628
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| |||| || ||||| |||| |||||||||||||||||| |||||||| |||||||  ||||||||    
T  13060697 ttatgtaaaagaacttatgcaaataaataagcttttatgtattgttcataagcttgtcaaggtagtttat 13060628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 22573644 - 22573713
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||| ||||| |||| ||| || |||| ||||||||| |||||||||| ||| ||||||||    
T  22573644 ttatgcaaaacaacttatgcaaataaatgagtttttttgtattatttataagtttgtaaatgtagtttat 22573713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 24030226 - 24030275
Alignment:
Q  52 aaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| ||||||||||||||||||||||||||| |||||||  ||||||||    
T  24030226 aaataaataagcttttatgtattattcataagcttgtcaaagtagtttat 24030275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 1372111 - 1372019
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| |||| |||| ||||| | |||||||||||| |||||| |||| ||||  ||||||||||||||| ||||| |||| ||| | ||||||    
T  1372111 tttggattgacttatttttgagcttatgcaaaacagtttatgtaaataaatacacttttatgtattatttataagcttgtaaatgtggtttat 1372019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 3520597 - 3520530
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagttta 100  Q
    |||||||||||| |||||| |||| ||||| |||||| |||||||||||||| |||||||  |||||||    
T  3520597 ttatgcaaaacagtttatgtaaataaataacctttta-gtattattcataagcttgtcaaggtagttta 3520530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 14243787 - 14243867
Alignment:
Q  5 cccatttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtt 85  Q
    |||| ||| |||| |||| ||||| | ||||||||||||  ||||| |||| ||||||||| |||||| ||||||||||||    
T  14243787 cccacttggattgacttatttttgagattatgcaaaacagcttatgtaaataaataagcttctatgtaatattcataagtt 14243867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 26002988 - 26003044
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgt 88  Q
    |||| ||||||| |||||| |||| |||||| |||||||||||||| ||||||||||    
T  26002988 ttatacaaaacagtttatgcaaataaataagtttttatgtattatttataagtttgt 26003044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 17657247 - 17657302
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| |||| ||||||||||||||||||||||||||| ||| || | ||||||||    
T  17657247 ttatgcaaataaataagcttttatgtattattcataagcttgccattgtagtttat 17657302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 28625485 - 28625540
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| |||| |||||||||||| |||||||||||||| |||||||  ||||||||    
T  28625485 ttatgcaaataaataagcttttaagtattattcataagcttgtcaaggtagtttat 28625540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 40452559 - 40452504
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| ||| ||||||||||||||| |||||||||||| |||||||  ||||||||    
T  40452559 ttatgcaaaggaataagcttttatgcattattcataagcttgtcaaggtagtttat 40452504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 42558841 - 42558759
Alignment:
Q  5 cccatttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgt 88  Q
    |||||||| |||| |||| |||||| || ||||||||||  |||||  ||| |||||||||||| ||| |||||||||||||||    
T  42558841 cccatttggattgacttatttttggatt-atgcaaaacagcttatgtgaataaataagcttttacgtactattcataagtttgt 42558759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 42706801 - 42706856
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| |||| |||||||||||| |||||||||||||| |||||||  ||||||||    
T  42706801 ttatgcaaataaataagcttttaagtattattcataagcttgtcaaggtagtttat 42706856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 91
Target Start/End: Complemental strand, 31637164 - 31637130
Alignment:
Q  57 aataagcttttatgtattattcataagtttgtcaa 91  Q
    ||||||||||||||||||||||||||| |||||||    
T  31637164 aataagcttttatgtattattcataagcttgtcaa 31637130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 11163364 - 11163307
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtc 89  Q
    ||||||||||||  ||||| |||| |||||| |||||||||| ||||||||| |||||    
T  11163364 ttatgcaaaacagcttatgtaaatcaataagtttttatgtatgattcataagcttgtc 11163307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 13739404 - 13739343
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatg 70  Q
    |||| ||||||||| ||||| ||||||| |||| || ||||| |||| ||||||||||||||    
T  13739404 tttggattggcttatttttgagtttatgaaaaataacttatgcaaataaataagcttttatg 13739343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 40152979 - 40152902
Alignment:
Q  24 ttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| ||||||  ||||||||||||  |||| |||||| |||||| |||||| ||||| ||||| || |||||||||    
T  40152979 ttttgagtttatctaaaacaatttatataaataaataagtttttatttattatccataaatttgttaagatagtttat 40152902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 101
Target Start/End: Complemental strand, 43266016 - 43265967
Alignment:
Q  52 aaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| ||||||||||||||||| ||||||||| |||| || |||||||||    
T  43266016 aaataaataagcttttatgtatcattcataagcttgttaagatagtttat 43265967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 43318994 - 43319063
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||| ||||| |||| |||| |  ||||||||||||| ||||| |||| ||| ||||||||    
T  43318994 ttatgcaaaacaacttatgcaaataaatatgtctttatgtattatttataagcttgttaatgtagtttat 43319063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 341966 - 342050
Alignment:
Q  17 ggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||| ||||| | ||||||||| ||| | ||| |||| |||||| |||||||||||||| | ||||||| |||  ||||||||    
T  341966 ggcttatttttgagcttatgcaaagcaactcatgtaaataaataagtttttatgtattatttacaagtttgccaaggtagtttat 342050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 1868862 - 1868906
Alignment:
Q  57 aataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||||||||||||| ||| |||||||  ||||||||    
T  1868862 aataagcttttatgtattattcacaagcttgtcaaggtagtttat 1868906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 30852163 - 30852231
Alignment:
Q  33 tatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| ||||||  ||||| |||| ||||| ||||||||||||||| ||||||| || ||| ||||||||    
T  30852163 tatgtaaaacagattatgcaaataaataaacttttatgtattattaataagttcgtaaatgtagtttat 30852231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 41059708 - 41059775
Alignment:
Q  17 ggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtt 85  Q
    |||||| ||||| | ||||| |||||| |||||| |||| ||||||||||||||| | |||||||||||    
T  41059708 ggcttatttttgagcttatgaaaaacagtttatgcaaataaataagcttttatgt-taattcataagtt 41059775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 29877607 - 29877681
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataag 83  Q
    |||| ||||||||| ||||| | ||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  29877607 tttggattggcttatttttgagcttatgcaaaacaatttatgcaaataaataagcttttatgtattattcataag 29877681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 23297406 - 23297498
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| ||||||||| ||||| | |||||||||| |  ||||| |||| |||||||||||||||||||||||||||||||||||  ||||||||    
T  23297406 tttggattggcttatttttgagcttatgcaaaatagcttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttat 23297498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 29996747 - 29996678
Alignment:
Q  19 cttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgt 88  Q
    |||| ||||| |||| |||||||||||||||| |||| ||||||||||||| ||||||||||||||||||    
T  29996747 cttatttttgagtttttgcaaaacaatttatgcaaataaataagcttttatatattattcataagtttgt 29996678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 43699601 - 43699509
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| ||||||||| ||||| | ||||| ||||||| ||||  |||| ||||||||||||||| ||||||||||| |||||||| ||||||||    
T  43699601 tttggattggcttatttttgagcttatgaaaaacaacttatacaaataaataagcttttatgtcttattcataagcttgtcaatgtagtttat 43699509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 948050 - 948132
Alignment:
Q  19 cttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||||||  | |||||||||| |  |||||||||| |||||||||||||||||||||||||| ||||||||  ||||||||    
T  948050 cttactttttagcttatgcaaaatagcttatgaaaataaataagcttttatgtattattcataactttgtcaaggtagtttat 948132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 3564211 - 3564280
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||  |||||||||| ||||| ||||||| |||||||||||||||||||||  ||||||||    
T  3564211 ttatgcaaaacagcttatgaaaataaataaacttttatatattattcataagtttgtcaaggtagtttat 3564280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 18424395 - 18424322
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataa 82  Q
    ||||||||| | || ||||| | ||||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  18424395 tttgaattgacatatttttgagcttatgcaaaacaatttatacaaataaataagcttttatgtattattcataa 18424322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 27368247 - 27368178
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| ||||||| ||||| |||| ||||||||||||| |||||||||||||||||||||| ||| ||||    
T  27368247 ttatgtaaaacaacttatgcaaataaataagcttttatatattattcataagtttgtcaatgtagcttat 27368178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 55638163 - 55638107
Alignment:
Q  45 tttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||| |||| || ||||||||||||||||||||||||||||| ||||||||||||    
T  55638163 tttatgcaaataaacaagcttttatgtattattcataagtttgtaaatatagtttat 55638107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 8130480 - 8130537
Alignment:
Q  33 tatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtca 90  Q
    |||||||||||  ||||| |||| |||||||||||||| |||||||||||||||||||    
T  8130480 tatgcaaaacagcttatgcaaataaataagcttttatgcattattcataagtttgtca 8130537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 42611986 - 42611905
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttt-tatgtattattcataagtttgtc 89  Q
    |||| ||||||||| ||||  | ||||||||||||| ||||| |||| |||||||||| ||||||||||||||||| |||||    
T  42611986 tttggattggcttattttttagcttatgcaaaacaacttatgcaaataaataagctttatatgtattattcataagcttgtc 42611905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 35124351 - 35124447
Alignment:
Q  5 cccatttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||||| |||| |||| ||||| | ||||||||||||  ||||| ||||  |||| |||||||||| |||||||||| |||||||  ||||||||    
T  35124351 cccatttggattgacttatttttgagcttatgcaaaacagcttatgcaaatatataaccttttatgtactattcataagcttgtcaaggtagtttat 35124447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 896975 - 897030
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| |||| ||||| ||||||||||||||||||||| |||||||| ||||||||    
T  896975 ttatgcaaataaataaacttttatgtattattcataagcttgtcaatgtagtttat 897030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 12495737 - 12495682
Alignment:
Q  36 gcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaa 91  Q
    ||||||||  ||||| |||| ||||||||||||||||||||||||||| |||||||    
T  12495737 gcaaaacagcttatgcaaataaataagcttttatgtattattcataagcttgtcaa 12495682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 28074370 - 28074425
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| |||| ||||||||||||||||||||||||||| |||||||  ||||||||    
T  28074370 ttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttat 28074425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 43415407 - 43415316
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagttta 100  Q
    ||||||||| |||| ||||| | ||| | ||||||| || || |||| |||||| |||||||||||||||||||| |||| ||| |||||||    
T  43415407 tttgaattgacttatttttgagcttaagtaaaacaacttctgcaaataaataagtttttatgtattattcataaggttgttaatgtagttta 43415316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 7148777 - 7148822
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaa 91  Q
    ||||| |||| ||||||||||||||||||||||||||| |||||||    
T  7148777 ttatgcaaataaataagcttttatgtattattcataagcttgtcaa 7148822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 10796354 - 10796422
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattatt 77  Q
    |||||||||||||| ||| | | ||||||||||||| || || |||| |||||| ||||||||||||||    
T  10796354 tttgaattggcttattttagagcttatgcaaaacaacttgtgtaaataaataagtttttatgtattatt 10796422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 33533896 - 33533988
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| |||| |||| ||||| |||||| |||||||| ||||| ||||  ||||||||  | |||||||||||||||| |||||  ||||||||    
T  33533896 tttggattgacttaattttgagtttatacaaaacaacttatgcaaatttataagcttcaaggtattattcataagttagtcaaggtagtttat 33533988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 35010200 - 35010271
Alignment:
Q  30 gtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||| |||| ||| || | |||| |||||| |||||||||||||| |||||||||||||  ||||||||    
T  35010200 gtttatggaaaataatataggtaaataaataagtttttatgtattatttataagtttgtcaacgtagtttat 35010271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 43740171 - 43740120
Alignment:
Q  31 tttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataa 82  Q
    ||||| ||||||||||||||||||| |||||| |||||  ||||||||||||    
T  43740171 tttatacaaaacaatttatgaaaataaataagtttttacatattattcataa 43740120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 38515747 - 38515689
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtca 90  Q
    |||||||||||| ||||||  ||| ||||||| | ||||||||||||||||| ||||||    
T  38515747 ttatgcaaaacagtttatgggaataaataagcctctatgtattattcataagcttgtca 38515689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 213042 - 212974
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||| ||||| |||| |||||| |||||| ||||||||||||| |||| ||  ||||||||    
T  213042 ttatgcaaaacaacttatgcaaataaataag-ttttatttattattcataagcttgttaaggtagtttat 212974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 38345916 - 38345863
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtt 85  Q
    ||||||||||||  ||||  |||| |||||||||||||||| ||||||||||||    
T  38345916 ttatgcaaaacagcttatccaaataaataagcttttatgtagtattcataagtt 38345863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 4331353 - 4331397
Alignment:
Q  57 aataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||| |||||||||||| ||||||||  ||||||||    
T  4331353 aataagcttttatttattattcataactttgtcaaggtagtttat 4331397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 34526248 - 34526323
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtt 85  Q
    ||||||||| |||||||| | | ||||| |||| | |||||| |||| ||||||||||||||| | |||||||||||    
T  34526248 tttgaattgacttactttcgagcttatgaaaaatagtttatgcaaataaataagcttttatgt-taattcataagtt 34526323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 34633367 - 34633435
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattatt 77  Q
    |||| ||||||||| ||||  | ||||||||||||| ||||| |||| ||||| ||||||||| |||||    
T  34633367 tttggattggcttattttttagcttatgcaaaacaacttatgcaaataaataaacttttatgttttatt 34633435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 46650275 - 46650331
Alignment:
Q  45 tttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||| |||| |||||||||| ||||||||||||||| ||||| | | ||||||||    
T  46650275 tttatgcaaataaataagctttcatgtattattcataaatttgtaattgtagtttat 46650331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 13131421 - 13131479
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtca 90  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||    
T  13131421 ttatgcaaaacaaattatgcaaataaataagcttttatgtattattcataagtttgtca 13131479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 32131402 - 32131500
Alignment:
Q  3 gacccatttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||||||| |||| |||| ||||| | ||||||||||||  ||||| |||| |||||||||||||| ||||||| ||||||||||||  ||||||||    
T  32131402 gacccatttggattgacttatttttgagcttatgcaaaacagcttatgcaaataaataagcttttatgcattattcctaagtttgtcaaggtagtttat 32131500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 16972452 - 16972395
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtc 89  Q
    |||||||||||||||| || |||| ||||||||| |||||||||||||||||||||||    
T  16972452 ttatgcaaaacaatttttgcaaataaataagcttgtatgtattattcataagtttgtc 16972395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 19327858 - 19327926
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||| ||||| |||| ||||| |||||||||||||||||||||||||| ||| ||||||||    
T  19327858 ttatgcaaaacaacttatgcaaataaataaacttttatgtattattcataagtttgt-aatgtagtttat 19327926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 4326310 - 4326239
Alignment:
Q  30 gtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||||||||||| |||| | |||| ||||||  |||||||||||||||||||||| | ||| ||||||||    
T  4326310 gtttatgcaaaacagtttagggaaataaataagtctttatgtattattcataagtttataaatgtagtttat 4326239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 28879063 - 28879118
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| |||| ||||||||||||||||||||||||||| |||||||  ||||||||    
T  28879063 ttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttat 28879118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 34102783 - 34102712
Alignment:
Q  31 tttatgcaaaacaatttatga-aaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||| ||||||||  |||| |||||||||||||||||||||||| ||||| | ||| ||||||||    
T  34102783 tttatgcaaaataatttatgccaaataaataagcttttatgtattattcatgagtttttaaatgtagtttat 34102712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 35453415 - 35453470
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| |||| |||||||||||||||||||||||||||||| ||||  ||||||||    
T  35453415 ttatgcaaataaataagcttttatgtattattcataagtttatcaaggtagtttat 35453470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 13265488 - 13265534
Alignment:
Q  45 tttatgaaaatgaataagcttttatgtattattcataagtttgtcaa 91  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||    
T  13265488 tttatgcaaataaataagcttttatgtattattcataagcttgtcaa 13265534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 31459037 - 31459106
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| ||| || |||||| |||| |||||  |||||| ||||||| |||||||||||||||||||||||    
T  31459037 ttatgaaaagcagtttatgtaaataaataaatttttatatattatttataagtttgtcaatatagtttat 31459106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 34286644 - 34286599
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaa 91  Q
    ||||| |||| ||||||||||||||||||||||||||| |||||||    
T  34286644 ttatgtaaataaataagcttttatgtattattcataagcttgtcaa 34286599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 11988194 - 11988242
Alignment:
Q  38 aaaacaatttatgaaaatgaataagcttttatgtattattcataagttt 86  Q
    ||||||||||||| |||| |||||| |||||||||||||| ||||||||    
T  11988194 aaaacaatttatgcaaataaataagtttttatgtattatttataagttt 11988242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 32213103 - 32213059
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgtca 90  Q
    ||||| |||| ||||||||||||||||||||||||||| ||||||    
T  32213103 ttatgcaaataaataagcttttatgtattattcataagcttgtca 32213059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 35168511 - 35168467
Alignment:
Q  57 aataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||||||||||||||||| |||||||  ||||||||    
T  35168511 aataagcttttatgtattattcataagcttgtcaaggtagtttat 35168467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 32975692 - 32975747
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| |||| ||||||||||||| ||||||||||||| |||||||  ||||||||    
T  32975692 ttatgcaaataaataagcttttatatattattcataagcttgtcaaggtagtttat 32975747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 34338481 - 34338426
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| |||| ||| |||||||  |||||||| |||||||||||||||||||||||    
T  34338481 ttatgcaaataaatgagctttttggtattatttataagtttgtcaatatagtttat 34338426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 1088917 - 1088998
Alignment:
Q  7 catttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgt 88  Q
    ||||||||||| |||| ||||  | ||||||||||||| ||||| |||  |||||| |||| |||||||| |||||| ||||    
T  1088917 catttgaattgacttatttttaagcttatgcaaaacaaattatgcaaacaaataagattttgtgtattatccataagcttgt 1088998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 7638514 - 7638567
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtt 85  Q
    |||||||||||  |||||| |||| ||| ||||||||||||||||| |||||||    
T  7638514 ttatgcaaaactgtttatgcaaataaatcagcttttatgtattattaataagtt 7638567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 16706195 - 16706126
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||||||||   ||||| |||| |||| | ||||||||||||||||||||||||  ||| ||||||||    
T  16706195 ttatgcaaaacggcttatgcaaataaatatgtttttatgtattattcataagtttgaaaatgtagtttat 16706126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 16926827 - 16926758
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| ||||||| ||| | |||| ||||| |||| |||||||||| || ||||||| ||||||||||||    
T  16926827 ttatgtaaaacaacttaggtaaataaataaactttaatgtattattgattagtttgtaaatatagtttat 16926758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 1089017 - 1089073
Alignment:
Q  45 tttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||| |||| |||||| ||| |||||||||||||||| |||||||| || |||||    
T  1089017 tttatgcaaataaataagttttaatgtattattcataagcttgtcaatgtactttat 1089073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 14942392 - 14942484
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| ||||||||| ||| | | ||||| ||||||| ||||| | || ||||||||||| ||||||||| ||||| |||| ||  ||||||||    
T  14942392 tttggattggcttattttagagcttatgtaaaacaacttatgtatataaataagcttttgtgtattatttataagcttgttaagttagtttat 14942484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 23412758 - 23412794
Alignment:
Q  65 tttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||||||||  |||||||||||||||||    
T  23412758 tttatgtattattcataaacttgtcaatatagtttat 23412794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 29243144 - 29243104
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagttt 86  Q
    ||||| |||| ||||||||||||||||||||| ||||||||    
T  29243144 ttatgcaaataaataagcttttatgtattatttataagttt 29243104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 34922926 - 34922991
Alignment:
Q  36 gcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||  ||||||||    
T  34922926 gcaaaacaacttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttat 34922991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 38372526 - 38372617
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagttta 100  Q
    |||| |||| |||| ||||| | ||||||||||||  ||||| |||| |||||||| ||||||||||||||||||||||||||  |||||||    
T  38372526 tttggattgacttatttttgagcttatgcaaaacagcttatgcaaataaataagctcttatgtattattcataagtttgtcaaggtagttta 38372617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 29390668 - 29390576
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| ||||||||| ||||| ||||||| ||||||| ||||| |||| ||||| |||| |||||||||||||||| |||| ||  ||||||||    
T  29390668 tttggattggcttatttttgagtttatggaaaacaacttatgcaaataaataatctttgatgtattattcataagcttgtaaaggtagtttat 29390576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 41677370 - 41677434
Alignment:
Q  37 caaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||||| ||||| |||| |||||  ||||||||||||||||||||||||||||| ||||||||    
T  41677370 caaaacaacttatgcaaataaataaatttttatgtattattcataagtttgtcaatgtagtttat 41677434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 21249134 - 21249201
Alignment:
Q  19 cttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagttt 86  Q
    |||| ||||| ||||||||||||| | ||||| |||| |||||| |||||||||||||||||||||||    
T  21249134 cttatttttgcgtttatgcaaaactacttatgcaaataaataagtttttatgtattattcataagttt 21249201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 12473197 - 12473253
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgt 88  Q
    ||||||||||||| ||||| |||  |||||| |||||||||||||||||||||||||    
T  12473197 ttatgcaaaacaacttatgcaaacaaataagtttttatgtattattcataagtttgt 12473253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 23120015 - 23119947
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagttta 100  Q
    |||||||||||||  |||| |||| ||||| |||| | ||||||||||||||||||||||| |||||||    
T  23120015 ttatgcaaaacaacctatgcaaataaataatctttaaagtattattcataagtttgtcaatgtagttta 23119947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 30181518 - 30181610
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| |||| |||| ||||| | |||||||| |||| ||| | |||| || |||||||||||||||||||||||| |||||||  ||||||||    
T  30181518 tttggattgacttatttttgagcttatgcaatacaacttaggcaaataaagaagcttttatgtattattcataagcttgtcaaggtagtttat 30181610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 101
Target Start/End: Original strand, 24414488 - 24414583
Alignment:
Q  6 ccatttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||||||||| | || || || | |||||||||| |||||||| |||| ||||| | |||||||||||| |||||| ||||||| |||| ||||    
T  24414488 ccatttgaattgacgtatttatgaggttatgcaaaaaaatttatgtaaataaataaacatttatgtattatccataagcttgtcaagatagcttat 24414583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 42083498 - 42083443
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| |||| |||||| ||||||||||||||||||||||||| |||||| |||||    
T  42083498 ttatgtaaataaataagtttttatgtattattcataagtttgtaaatataatttat 42083443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 7098192 - 7098126
Alignment:
Q  35 tgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||| | |||||  |||| |||||| ||||||| |||||||||||||||||||| |||||||||    
T  7098192 tgcaaaatagtttatacaaataaataagattttatgaattattcataagtttgtcaagatagtttat 7098126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 44613568 - 44613499
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||  ||||| |||| ||||||||||||| ||||||||||||| |||| ||  ||||||||    
T  44613568 ttatgcaaaacagcttatgcaaataaataagcttttatttattattcataagcttgttaaggtagtttat 44613499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 48021742 - 48021673
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| |||||||||||||| |||| |||||||| |||| ||||||||||||| |||| ||  ||||||||    
T  48021742 ttatacaaaacaatttatgcaaataaataagctcttatttattattcataagcttgttaaagtagtttat 48021673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 22319409 - 22319317
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| ||||||||| ||| | |||||||||||    |||||| |||| ||||| | || ||||||||||||||||||||| || |||||||||    
T  22319409 tttggattggcttattttagagtttatgcaaagaggtttatgcaaataaataaacattaatgtattattcataagtttgttaacatagtttat 22319317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 40629534 - 40629443
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| ||||||||| ||||| | ||||||||||||  ||||  |||| ||||| |||| |||||||||||||||| |||||||  ||||||||    
T  40629534 tttggattggcttatttttgagcttatgcaaaacagcttatccaaataaataaacttt-atgtattattcataagcttgtcaaggtagtttat 40629443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 18837190 - 18837269
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgt 88  Q
    |||| ||||||||| ||||| | ||||||||||||   |||| |||| ||||||||| | ||||||||||||||| ||||    
T  18837190 tttggattggcttatttttgagcttatgcaaaacagcatatgcaaataaataagcttatgtgtattattcataagcttgt 18837269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 23356586 - 23356527
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaa 91  Q
    |||| |||||||| |||||||||| ||||||  ||| ||||||||||| |||||||||||    
T  23356586 ttatacaaaacaacttatgaaaataaataaggctttttgtattattcacaagtttgtcaa 23356527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 29378650 - 29378705
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| |||| ||||||||||||||||||||| || ||||||||||  ||||||||    
T  29378650 ttatgcaaataaataagcttttatgtattatttatgagtttgtcaaggtagtttat 29378705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 39803014 - 39803084
Alignment:
Q  31 tttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||| || |||||||||| ||| ||||||| | |||| || ||||||||||||| || ||||||    
T  39803014 tttatgcaaaataaattatgaaaataaatgagcttttttctattgtttataagtttgtcaacattgtttat 39803084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 47511048 - 47511090
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgt 88  Q
    ||||| |||| ||||||||||||||||||||||||||| ||||    
T  47511048 ttatgcaaataaataagcttttatgtattattcataagcttgt 47511090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 14536905 - 14536942
Alignment:
Q  64 ttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  14536905 ttttatgtattattcataagattgtcaagatagtttat 14536942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 14691366 - 14691325
Alignment:
Q  60 aagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||||||||||||||||||||| |||||||| || |||||    
T  14691366 aagcttttatgtattattcataagcttgtcaatgtaatttat 14691325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 33288180 - 33288135
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaa 91  Q
    ||||| |||| |||||||||||||||||||||||| || |||||||    
T  33288180 ttatgcaaataaataagcttttatgtattattcattagcttgtcaa 33288135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 9546479 - 9546423
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgt 88  Q
    ||||| |||| |||||||| |||| |||||  ||||||||||||||||||| |||||    
T  9546479 ttatgtaaaataatttatgcaaataaataaagttttatgtattattcataaatttgt 9546423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 34913485 - 34913416
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||  ||||| |||| |||||||||||||||||||||||||||||||| || |||||||||    
T  34913485 ttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataagtttgttaagatagtttat 34913416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 21788440 - 21788517
Alignment:
Q  24 ttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| ||||||||||||||  ||||| |||| ||||||||||||| ||||||||||||| |||| || |||||||||    
T  21788440 ttttgagtttatgcaaaacatcttatgcaaataaataagcttttatttattattcataagcttgttaagatagtttat 21788517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 101
Target Start/End: Original strand, 4026891 - 4026985
Alignment:
Q  6 ccatttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||||| |||||||| ||||| | |||||||||||   ||||| |||| ||||||||||||||||||| ||||||| |||||||  ||||||||    
T  4026891 ccatttgatttggcttatttttgagcttatgcaaaactgcttatgcaaataaataagcttttatgtatta-tcataagcttgtcaaggtagtttat 4026985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 33321407 - 33321338
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||| || || |||| ||||||||||||||| ||||||||||| |||||||  ||||||||    
T  33321407 ttatgcaaaacaacttgtgcaaataaataagcttttatgtcttattcataagcttgtcaaggtagtttat 33321338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 4090459 - 4090539
Alignment:
Q  11 tgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaa 91  Q
    |||||||||||| ||||| | ||||||||||||  ||||| |||| ||||| |||| |||||||||||||||  |||||||    
T  4090459 tgaattggcttatttttgagcttatgcaaaacagcttatgcaaataaataaactttgatgtattattcataatcttgtcaa 4090539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 25836834 - 25836738
Alignment:
Q  5 cccatttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||| |||| ||||| |  |  ||||||||  ||||| |||| |||| |||||||||||||||||||||| |||||||  ||||||||    
T  25836834 cccatttgaattgccttatttttgagcctgcgcaaaacagcttatgcaaataaatatgcttttatgtattattcataagcttgtcaaggtagtttat 25836738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 37409635 - 37409703
Alignment:
Q  33 tatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||||||||| ||||| |||| |||||||||||| |||||||||   ||||||||||| ||||||||    
T  37409635 tatgcaaaacaacttatgcaaataaataagcttttaagtattattctctagtttgtcaatgtagtttat 37409703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 37420085 - 37419990
Alignment:
Q  5 cccatttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||||| ||||||||| ||||  | ||||| |||| |||||||| |||| ||||||||||||||| | |||||||| ||||||||  ||||||||    
T  37420085 cccatttggattggcttattttttagcttatgaaaaataatttatgcaaataaataagcttttatgt-taattcataattttgtcaaggtagtttat 37419990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 29133749 - 29133704
Alignment:
Q  45 tttatgaaaatgaataagcttttatgtattattcataagtttgtca 90  Q
    |||||| |||| ||||| ||||||||||||||||||||||||||||    
T  29133749 tttatgcaaataaataatcttttatgtattattcataagtttgtca 29133704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 33321498 - 33321429
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||| ||||| |||| | |||| |||||||||||| ||||||| |||||||  ||||||||    
T  33321498 ttatgcaaaacaacttatgcaaataattaagtttttatgtattactcataagcttgtcaaggtagtttat 33321429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 35515599 - 35515506
Alignment:
Q  8 atttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||||| ||| | | ||||| |||||| |||| | |||| |||| |  ||||||||||||| |||||||||| ||| ||||||||    
T  35515599 atttgaattggcttattttagagcttatgtaaaacagtttacgtaaataaatatgtctttatgtattatttataagtttgttaatgtagtttat 35515506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 42839390 - 42839346
Alignment:
Q  57 aataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||| ||||||||||||||||||||||||||||  ||||||||    
T  42839390 aataagtttttatgtattattcataagtttgtcaagttagtttat 42839346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 887417 - 887472
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| |||| ||||||||||| ||||||||||||||| |||||||  ||||||||    
T  887417 ttatgcaaataaataagcttttttgtattattcataagcttgtcaaggtagtttat 887472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 27703553 - 27703502
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataag 83  Q
    ||||||||||||  ||||| |||| ||||||||||||| |||||||||||||    
T  27703553 ttatgcaaaacagcttatgcaaataaataagcttttatatattattcataag 27703502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 91
Target Start/End: Original strand, 35731149 - 35731188
Alignment:
Q  52 aaatgaataagcttttatgtattattcataagtttgtcaa 91  Q
    |||| |||||||||||||||||||||||| ||||||||||    
T  35731149 aaataaataagcttttatgtattattcatgagtttgtcaa 35731188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 5516069 - 5516135
Alignment:
Q  35 tgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||||||  ||||| |||  ||||||||| ||||| |||||||||||||||| ||| ||||||||    
T  5516069 tgcaaaacagcttatgtaaaaaaataagcttctatgtgttattcataagtttgtaaatgtagtttat 5516135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 101
Target Start/End: Original strand, 12442831 - 12442873
Alignment:
Q  59 taagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||||||| |||||||||||||| ||||||| |||||||||    
T  12442831 taagcttttaggtattattcataagcttgtcaagatagtttat 12442873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 15155804 - 15155854
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataa 82  Q
    ||||| ||||||| |||||||||| |||| |||||||||||||||| ||||    
T  15155804 ttatgtaaaacaacttatgaaaataaatatgcttttatgtattatttataa 15155854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 101
Target Start/End: Original strand, 33555685 - 33555719
Alignment:
Q  67 tatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||||||||||||||||||| ||||||||||||    
T  33555685 tatgtattattcataagtttgtaaatatagtttat 33555719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 2790183 - 2790106
Alignment:
Q  15 ttggcttacttttgggtttatgcaaaacaatttatgaaaatgaataa-gcttttatgtattattcataagtttgtcaa 91  Q
    |||||||| ||||| | ||||||||||||  ||||| |||| ||||| ||||||||| |||||| ||||| |||||||    
T  2790183 ttggcttatttttgagcttatgcaaaacagcttatgcaaataaataaagcttttatgcattattgataagcttgtcaa 2790106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 8441464 - 8441533
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||| ||  ||||| |||| |||| | |||||||||||||| |||||||||| ||| ||||||||    
T  8441464 ttatgcaaagcagcttatgcaaataaatatgtttttatgtattatttataagtttgttaatgtagtttat 8441533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 755837 - 755781
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgt 88  Q
    ||||||||||||| ||| | |||| | ||||||||||||||||||||| ||| ||||    
T  755837 ttatgcaaaacaacttacgcaaataattaagcttttatgtattattcagaagcttgt 755781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 30533974 - 30534040
Alignment:
Q  35 tgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||||||  ||||| |||| |||||||||||||||||||||||||||||||| ||| ||||||||    
T  30533974 tgcaaaacagcttatgcaaataaataagcttttatgtattattcataagtttgtaaatgtagtttat 30534040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 10054386 - 10054441
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| |||| |||||||||||||||||||||||||||||||| ||| ||||||||    
T  10054386 ttatgcaaataaataagcttttatgtattattcataagtttgtaaatgtagtttat 10054441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 9201853 - 9201768
Alignment:
Q  5 cccatttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtca 90  Q
    |||||||  ||||||||| ||||| | ||| ||||||||  ||||| |||||||||||||||  ||||||||||||||| ||||||    
T  9201853 cccattttgattggcttaattttgagcttacgcaaaacagcttatgcaaatgaataagctttgctgtattattcataagcttgtca 9201768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 2040281 - 2040225
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgt 88  Q
    ||||||||||||| ||||  |||| ||||||||||||| ||||||||||||||||||    
T  2040281 ttatgcaaaacaacttatataaataaataagcttttatttattattcataagtttgt 2040225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 2034310 - 2034255
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| |||| ||||||||||||||||||||| |||||||||||||  ||||||||    
T  2034310 ttatgcaaataaataagcttttatgtattatttataagtttgtcaaggtagtttat 2034255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 4272371 - 4272442
Alignment:
Q  30 gtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||| |||||||||||||| |||| |||||  ||||||||||||| ||||||||| | ||| ||||||||    
T  4272371 gtttatacaaaacaatttatgcaaataaataactttttatgtattatacataagtttataaatgtagtttat 4272442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 22816674 - 22816611
Alignment:
Q  38 aaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||| |||| |||||| ||||||||| ||||||||||||| | |||||| |||||    
T  22816674 aaaacaatttatgcaaataaataagtttttatgtaatattcataagtttttaaatataatttat 22816611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 3211093 - 3211027
Alignment:
Q  35 tgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||||||  ||||| |||| ||||||||||||||||||| | ||||| |||||||| ||||||||    
T  3211093 tgcaaaacagcttatgcaaataaataagcttttatgtattactgataagcttgtcaatgtagtttat 3211027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 8014751 - 8014848
Alignment:
Q  3 gacccatttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||||||| ||||||||| ||||| ||||||  ||||||  ||||| |||| | |||||||||||  |||||||||||| |||||||  ||||||||    
T  8014751 gacccatttggattggctta-ttttgagtttatagaaaacagcttatgcaaataagtaagcttttattcattattcataagcttgtcaaggtagtttat 8014848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 29623572 - 29623503
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||| ||||| |||| ||||| ||||||| ||||||| || ||||||| ||| ||||||||    
T  29623572 ttatgcaaaacaacttatgcaaataaataaccttttatttattatttatgagtttgttaatgtagtttat 29623503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 34509931 - 34509972
Alignment:
Q  60 aagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||||||||||||||||||||||||||||||  |||||||    
T  34509931 aagcttttatgtattattcataagtttgtcaatggagtttat 34509972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 91
Target Start/End: Complemental strand, 1240686 - 1240647
Alignment:
Q  52 aaatgaataagcttttatgtattattcataagtttgtcaa 91  Q
    |||| ||||||||||||||||||||||||||| |||||||    
T  1240686 aaataaataagcttttatgtattattcataagcttgtcaa 1240647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 2027257 - 2027202
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| |||| |||||||||||||| |||||||| ||||||||||| | |||||||    
T  2027257 ttatgcaaataaataagcttttatgcattattcagaagtttgtcaagacagtttat 2027202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 12817173 - 12817118
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| |||| |||||||||| |||||||||||||||| | |||||| ||||||||    
T  12817173 ttatgcaaataaataagctttaatgtattattcataagctagtcaatgtagtttat 12817118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 6632650 - 6632719
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| |||||||| ||||| |||| |||| |||||||||||||||| ||||  |||| ||| ||||||||    
T  6632650 ttattcaaaacaacttatgcaaataaatatgcttttatgtattatttataaacttgttaatgtagtttat 6632719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 6758618 - 6758687
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||| ||||| |||| ||||||||||| | |||||| |||||| |||| ||  ||||||||    
T  6758618 ttatgcaaaacaacttatgcaaataaataagcttttgtttattatccataagcttgttaaggtagtttat 6758687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 10755361 - 10755316
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaa 91  Q
    ||||| |||| |||||||||||| |||||||||||||| |||||||    
T  10755361 ttatgcaaataaataagcttttacgtattattcataagcttgtcaa 10755316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 2255725 - 2255781
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgt 88  Q
    ||||||||||| | ||||| |||| ||| ||||||||||||| ||||||||| ||||    
T  2255725 ttatgcaaaacgacttatgcaaataaatgagcttttatgtatgattcataagcttgt 2255781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 7267791 - 7267835
Alignment:
Q  57 aataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||||||||||||||||| ||| |||  ||||||||    
T  7267791 aataagcttttatgtattattcataagcttgccaaggtagtttat 7267835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 10658364 - 10658304
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttat 69  Q
    ||||||||| |||| ||||| ||||||| |||| |||| ||| |||| |||||||||||||    
T  10658364 tttgaattgtcttatttttgagtttatgaaaaataattaatgcaaataaataagcttttat 10658304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 24625819 - 24625911
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| |||| |||| ||||| | ||| |||| ||||  |||| |||| |||| |||||||||||||||||||||| |||| ||  ||||||||    
T  24625819 tttggattgtcttatttttgaggttaggcaagacaacatatgcaaataaatacgcttttatgtattattcataagcttgttaaggtagtttat 24625911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 7292671 - 7292740
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| ||| ||| ||||| ||||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  7292671 ttatgtaaagcaacttatgcaaatacataagctcttatgtattattcataagtttgtcaatatagtttat 7292740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 11528882 - 11528951
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||| ||||| || | |||||||||||||||||||||||||| ||||| ||| ||||||||    
T  11528882 ttatgcaaaacaacttatgtaagtaaataagcttttatgtattattcataaatttgttaatgtagtttat 11528951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 40581172 - 40581103
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||||| ||||| |||||||  ||||||||    
T  40581172 ttatgcaaaacaacttatgcaaataaataagcttttatgtattattaataagcttgtcaaggtagtttat 40581103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 21296734 - 21296826
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| |||| |||| ||||| | ||||||||||||||||||| |||| |||||| |||||| ||||||||||| |||| ||||  ||||||||    
T  21296734 tttggattgacttatttttgagattatgcaaaacaatttatgcaaataaataagtttttatctattattcatacgtttatcaaggtagtttat 21296826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 22809312 - 22809219
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagc-ttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||| |||| ||||| | ||||||||||||  ||||| |||| ||||||| |||||| ||||||||||||| |||||||  ||||||||    
T  22809312 tttgaattgacttatttttgaggttatgcaaaacagcttatgcaaataaataagctttttatatattattcataagcttgtcaaggtagtttat 22809219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 53218135 - 53218066
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||| |||||  ||| |||||| |||||||||||||||||||| |||||||  ||||||||    
T  53218135 ttatgcaaaacaacttatgcgaataaataagattttatgtattattcataagcttgtcaaggtagtttat 53218066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 29270329 - 29270421
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| |||| |||| ||||| | ||||||||||||| ||||   ||| ||||||||||||||||||||||||||| || |||| ||| |||||    
T  29270329 tttggattgacttatttttgagcttatgcaaaacaacttataggaataaataagcttttatgtattattcataagcttttcaagataatttat 29270421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 32901242 - 32901174
Alignment:
Q  33 tatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||||||||| ||||| |||| ||||||||||||| ||||||||| || ||||| || |||||||||    
T  32901242 tatgcaaaacaacttatgtaaataaataagcttttatttattattcacaaatttgttaagatagtttat 32901174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 34707831 - 34707739
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| |||| |||| ||||| | ||||||||||||| ||| | ||||  |||||||||||||||||||||||||| |||| ||  ||||||||    
T  34707831 tttggattgacttatttttgagcttatgcaaaacaacttacgtaaatatataagcttttatgtattattcataagcttgttaaggtagtttat 34707739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 43971937 - 43971873
Alignment:
Q  37 caaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||||||||| | |||| ||||||||||||| ||||||||| |||||||| || |||||||||    
T  43971937 caaaacaatttacgtaaataaataagcttttatttattattcacaagtttgttaaaatagtttat 43971873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 10448765 - 10448834
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||| ||||| |||| |||| || ||||||||||||| ||||| |||| ||| ||||||||    
T  10448765 ttatgcaaaacaacttatgcaaataaatatgcctttatgtattatttataagcttgttaatgtagtttat 10448834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 10521165 - 10521214
Alignment:
Q  52 aaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| ||||||||| ||||||||||||||||| |||||||| ||||||||    
T  10521165 aaataaataagcttatatgtattattcataagcttgtcaatgtagtttat 10521214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 10667409 - 10667458
Alignment:
Q  52 aaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| ||||||||| ||||||||||||||||| |||||||| ||||||||    
T  10667409 aaataaataagcttatatgtattattcataagcttgtcaatgtagtttat 10667458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 23555452 - 23555521
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattc 78  Q
    |||| ||||||||| ||||| | |||| | ||||| |||||| |||| ||||||||||||||||||||||    
T  23555452 tttggattggcttatttttgagcttatacgaaacagtttatgcaaataaataagcttttatgtattattc 23555521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 24842196 - 24842143
Alignment:
Q  38 aaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaa 91  Q
    ||||||| ||||| |||| |||||  ||||||||||||||||||||||||||||    
T  24842196 aaaacaacttatgcaaataaataaatttttatgtattattcataagtttgtcaa 24842143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 101
Target Start/End: Complemental strand, 52421216 - 52421167
Alignment:
Q  52 aaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| ||||||||||||||||||||||||||| |||||||  ||||||||    
T  52421216 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttat 52421167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 10272113 - 10272164
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataag 83  Q
    ||||||||||||| | ||| |||| ||||| |||||||||||||||||||||    
T  10272113 ttatgcaaaacaactcatgcaaataaataaacttttatgtattattcataag 10272164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 43080015 - 43079960
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| |||| ||||||||||||||| ||||||||||| |||||||  ||||||||    
T  43080015 ttatgcaaataaataagcttttatgtgttattcataagcttgtcaaggtagtttat 43079960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 52021251 - 52021306
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| |||| |||| |||||||||||||||||||||| |||||||  ||||||||    
T  52021251 ttatgcaaataaatatgcttttatgtattattcataagattgtcaaggtagtttat 52021306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 36266241 - 36266291
Alignment:
Q  38 aaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgt 88  Q
    |||||| |||||| |||| ||||| ||||||||||||||| ||||||||||    
T  36266241 aaaacagtttatgcaaataaataaacttttatgtattatttataagtttgt 36266291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 3845866 - 3845915
Alignment:
Q  52 aaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| ||||||||||||| ||||||||||||| |||||||  ||||||||    
T  3845866 aaataaataagcttttatatattattcataagcttgtcaagctagtttat 3845915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 27769629 - 27769705
Alignment:
Q  24 ttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| ||||||||||||||| ||||| |||| ||| | ||||| | ||||||| ||||| |||||||| ||||||||    
T  27769629 ttttgagtttatgcaaaacaacttatgcaaataaatgaactttt-tatattatttataagcttgtcaatgtagtttat 27769705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 4257390 - 4257342
Alignment:
Q  38 aaaacaatttatgaaaatgaataagcttttatgtattattcataagttt 86  Q
    ||||||| ||||| |||| |||||| |||||||||||||| ||||||||    
T  4257390 aaaacaacttatgcaaataaataagtttttatgtattatttataagttt 4257342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 5129897 - 5129841
Alignment:
Q  45 tttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||| |||| |||||| ||| |||||||||||||||| |||||||| || |||||    
T  5129897 tttatgcaaataaataagttttaatgtattattcataagcttgtcaatgtactttat 5129841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 30199038 - 30198982
Alignment:
Q  45 tttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||| |||| |||||| |||||||| ||||||||||||| || ||| ||||||||    
T  30199038 tttatgcaaataaataagtttttatgtgttattcataagttagtaaatgtagtttat 30198982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 50022074 - 50022010
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtat 73  Q
    |||| ||||||||| ||| | | |||||||||||| |||||| |||| |||||||||| ||||||    
T  50022074 tttggattggcttattttagagattatgcaaaacagtttatgcaaataaataagctttgatgtat 50022010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 28689966 - 28690064
Alignment:
Q  5 cccatttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaata--agcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||||| ||||||||| ||||  ||||||||| ||||  ||||| |||| ||||  || ||||||||||||||||||||||||||||  ||||||||    
T  28689966 cccatttggattggcttattttttagtttatgcagaacagcttatgcaaataaatataaggttttatgtattattcataagtttgtcaaggtagtttat 28690064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 18327514 - 18327584
Alignment:
Q  31 tttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| |||||||  ||||| |||| ||||||||||||||||||| ||||||| ||||||| |||||||||    
T  18327514 tttattcaaaacagcttatgcaaataaataagcttttatgtattactcataagcttgtcaagatagtttat 18327584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 391136 - 391225
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagc-ttttatgtattattcataagtttgtcaatatagt 97  Q
    |||| ||||||||| ||||| | ||||||||||||  ||||| |||| ||||||| |||||| ||||||||||||| |||||||| ||||    
T  391136 tttggattggcttatttttgaggttatgcaaaacagcttatgcaaataaataagctttttatatattattcataagcttgtcaatgtagt 391225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 10365162 - 10365231
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| |||| |||||||| |||||||||| ||||||||||||||| ||||| |||||||  ||||||||    
T  10365162 ttatgtaaaataatttatgcaaatgaataaacttttatgtattattaataagcttgtcaaagtagtttat 10365231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 10850166 - 10850097
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||||||| | ||| || |||| ||||||||||||||||||||||||||| |||||||  ||||||||    
T  10850166 ttatgcaaaatagtttttgcaaataaataagcttttatgtattattcataaggttgtcaacgtagtttat 10850097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 20169255 - 20169324
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| ||||||  ||||| |||| ||||||||||||||||||||| |||||||| | ||||||||||||    
T  20169255 ttatgaaaaacagcttatgcaaataaataagcttttatgtattatttataagtttttaaatatagtttat 20169324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 1265811 - 1265719
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||| |||| ||||| | ||||||||||||| ||||  |||   ||||| ||||||||||||||||||| ||||||||  ||||||||    
T  1265811 tttgaattgacttatttttgagcttatgcaaaacaacttatacaaacagataagattttatgtattattcataattttgtcaaggtagtttat 1265719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 49738404 - 49738328
Alignment:
Q  24 ttttgggtttatgcaaaacaatttatgaaaatgaataa-gcttttatgtattattcataagtttgtcaatatagttt 99  Q
    ||||| |||||||||||||||  ||||||||| || || | ||||||| |||||||||||||||||||| |||||||    
T  49738404 ttttgagtttatgcaaaacaacatatgaaaataaaaaaagtttttatgaattattcataagtttgtcaaaatagttt 49738328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 6337837 - 6337782
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| |||| ||||||||||||||||||||||||||| |||||||  ||||||||    
T  6337837 ttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttat 6337782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 37712065 - 37712127
Alignment:
Q  38 aaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||| |||||| ||||||||||||||||||||| |||||||||| |||||||  ||||||||    
T  37712065 aaaacagtttatgcaaatgaataagcttttatgta-tattcataagcttgtcaaggtagtttat 37712127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 4068126 - 4068175
Alignment:
Q  52 aaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| ||||||||||||||||||||||||||| |||||||  ||||||||    
T  4068126 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttat 4068175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 35897718 - 35897649
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||| ||||| |||| |||||| |||||| ||||||||||||| || ||||  ||||||||    
T  35897718 ttatgcaaaacaacttatgcaaataaataagtttttatttattattcataagcttttcaaagtagtttat 35897649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 10082218 - 10082310
Alignment:
Q  9 tttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||| | |||| ||||| |||| ||  |||||| ||||| |||| |||||| |||||||| ||||| |||||||||||||  ||||||||    
T  10082218 tttgaatggacttatttttgagtttttgtgaaacaacttatgcaaataaataagtttttatgtgttattgataagtttgtcaaggtagtttat 10082310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 15515417 - 15515373
Alignment:
Q  57 aataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||||||||||||||||| |||||||  ||||||||    
T  15515417 aataagcttttatgtattattcataagcttgtcaaggtagtttat 15515373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 41003381 - 41003437
Alignment:
Q  35 tgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaa 91  Q
    ||||||| || ||||| |||| |||||| |||||||||||||| |||||||||||||    
T  41003381 tgcaaaaaaacttatgcaaataaataagtttttatgtattatttataagtttgtcaa 41003437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 41196780 - 41196736
Alignment:
Q  57 aataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||| |||||||||||||||||||| |||||||| ||||||||    
T  41196780 aataagtttttatgtattattcataagcttgtcaatgtagtttat 41196736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 26542970 - 26543033
Alignment:
Q  38 aaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||| ||||| |||| |||| |||||||||||||||  |||||||||| ||| ||||||||    
T  26542970 aaaacaacttatgcaaataaatatgcttttatgtattatatataagtttgttaatgtagtttat 26543033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 35590121 - 35590180
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaa 91  Q
    ||||| ||||||| ||||| |||| |||||||||||||||||  |||||||| |||||||    
T  35590121 ttatgtaaaacaacttatgcaaataaataagcttttatgtatagttcataagcttgtcaa 35590180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 36423062 - 36423007
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| |||| ||||||||||||| |||||||||||||||||| ||  ||||||||    
T  36423062 ttatgcaaataaataagcttttatttattattcataagtttgttaaggtagtttat 36423007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 46501090 - 46501027
Alignment:
Q  38 aaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||| |||| ||| ||||||| ||||||||| ||||| |||||| | ||||||||    
T  46501090 aaaacaatttatgtaaataaatgagcttttttgtattatttataagcttgtcattgtagtttat 46501027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 51409788 - 51409733
Alignment:
Q  46 ttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||| |||| |||||| || |||||||||||||||||||||| ||| ||||||||    
T  51409788 ttatgcaaataaataagtttgtatgtattattcataagtttgtaaatgtagtttat 51409733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 101
Target Start/End: Original strand, 39941463 - 39941501
Alignment:
Q  63 cttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||||||||||| ||||||| |||||||||    
T  39941463 cttttatgtattattcataagcttgtcaaaatagtttat 39941501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 15631895 - 15631964
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| |||||||| ||||  |||| |||||| |||||||||||||| |||||||||| ||| || |||||    
T  15631895 ttatacaaaacaacttatacaaataaataagtttttatgtattatttataagtttgttaatgtattttat 15631964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 16225500 - 16225553
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtt 85  Q
    |||||||||||| |||||| |||| |||||| |||||||||||| | |||||||    
T  16225500 ttatgcaaaacagtttatgtaaataaataagtttttatgtattaattataagtt 16225553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 26946227 - 26946130
Alignment:
Q  5 cccatttgaattggcttacttttgggtttatgcaaaacaatttatgaaaatgaataagc-ttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||||||| |||| |||| ||||| | |||||||||||   ||||| |||| ||||||| |||||||| ||||||||||| |||| ||  ||||||||    
T  26946227 cccatttggattgacttatttttgagcttatgcaaaacggcttatgtaaataaataagctttttatgtgttattcataagcttgttaaggtagtttat 26946130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 26988159 - 26988208
Alignment:
Q  52 aaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| ||||||||||||||| ||||||||||| |||||||  ||||||||    
T  26988159 aaataaataagcttttatgtcttattcataagcttgtcaaggtagtttat 26988208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 16889040 - 16889004
Alignment:
Q  52 aaatgaataagcttttatgtattattcataagtttgt 88  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  16889040 aaataaataagcttttatgtattattcataagcttgt 16889004  T

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Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 46689645 - 46689597
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcat 80  Q
    |||||||||||| |||||| |||| || |||||||||| ||||||||||    
T  46689645 ttatgcaaaacagtttatgcaaataaaaaagcttttatttattattcat 46689597  T

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Target: scaffold0157 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 24740 - 24795
Alignment:
Q  36 gcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaa 91  Q
    ||||||||  ||||| |||| ||||||||||||||||||||||||||| |||||||    
T  24740 gcaaaacagcttatgcaaataaataagcttttatgtattattcataagcttgtcaa 24795  T

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Target: scaffold0332 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 101
Target Start/End: Complemental strand, 14821 - 14772
Alignment:
Q  52 aaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| |||||||||||||||||||||||||||||| | ||| ||||||||    
T  14821 aaataaataagcttttatgtattattcataagtttttaaatgtagtttat 14772  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 178498 - 178545
Alignment:
Q  39 aaacaatttatgaaaatgaataagcttttatgtattattcataagttt 86  Q
    |||||| ||||| |||| ||||||||||||||||||||| ||||||||    
T  178498 aaacaacttatgcaaataaataagcttttatgtattatttataagttt 178545  T

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Target: scaffold1088 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1088
Description:

Target: scaffold1088; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 1285 - 1354
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    ||||||||||||| ||||| |||||||||||  || || ||||||| |||||||||| ||  ||||||||    
T  1285 ttatgcaaaacaacttatgcaaatgaataaggattaatatattatttataagtttgttaaggtagtttat 1354  T

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Target: scaffold0048 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 101
Target Start/End: Complemental strand, 58943 - 58894
Alignment:
Q  52 aaatgaataagcttttatgtattattcataagtttgtcaatatagtttat 101  Q
    |||| ||||| | |||||||||||||| ||||||||||||| ||||||||    
T  58943 aaataaataaacgtttatgtattattcttaagtttgtcaatgtagtttat 58894  T

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Target: scaffold1367 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 1049 - 1105
Alignment:
Q  32 ttatgcaaaacaatttatgaaaatgaataagcttttatgtattattcataagtttgt 88  Q
    |||| |||||||| ||||| |||| ||||||||||||| |||||| |||||| ||||    
T  1049 ttatacaaaacaacttatgcaaataaataagcttttatttattatccataagattgt 1105  T

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