View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10205_low_6 (Length: 380)

Name: NF10205_low_6
Description: NF10205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10205_low_6
NF10205_low_6
[»] chr3 (36 HSPs)
chr3 (1-185)||(48712905-48713089)
chr3 (269-363)||(48713099-48713193)
chr3 (180-271)||(19253710-19253809)
chr3 (183-267)||(996313-996405)
chr3 (185-271)||(3206420-3206514)
chr3 (181-271)||(10139370-10139468)
chr3 (184-271)||(20498097-20498191)
chr3 (186-271)||(37820701-37820794)
chr3 (184-259)||(12734076-12734159)
chr3 (180-271)||(51699703-51699802)
chr3 (183-271)||(35337620-35337717)
chr3 (177-235)||(33808070-33808128)
chr3 (184-236)||(16010750-16010802)
chr3 (185-261)||(33996733-33996809)
chr3 (186-271)||(54625481-54625574)
chr3 (179-271)||(25418248-25418348)
chr3 (185-230)||(22057651-22057696)
chr3 (189-267)||(29029898-29029984)
chr3 (183-265)||(29449090-29449180)
chr3 (184-262)||(40246731-40246817)
chr3 (183-271)||(6589449-6589546)
chr3 (185-236)||(52114418-52114469)
chr3 (180-271)||(15493955-15494054)
chr3 (184-271)||(23753610-23753705)
chr3 (178-271)||(36674354-36674456)
chr3 (188-232)||(27899277-27899321)
chr3 (206-271)||(44762261-44762334)
chr3 (189-229)||(48379050-48379090)
chr3 (237-267)||(6131440-6131470)
chr3 (237-271)||(53929342-53929376)
chr3 (183-232)||(19552186-19552235)
chr3 (181-230)||(26006023-26006072)
chr3 (181-271)||(39842653-39842751)
chr3 (185-229)||(45926990-45927034)
chr3 (186-230)||(50900487-50900531)
chr3 (185-221)||(52079881-52079917)
[»] chr1 (28 HSPs)
chr1 (184-271)||(22183251-22183346)
chr1 (181-271)||(953697-953795)
chr1 (180-271)||(6304478-6304577)
chr1 (180-271)||(28824596-28824695)
chr1 (184-271)||(19452074-19452169)
chr1 (185-271)||(35279554-35279648)
chr1 (184-271)||(730030-730124)
chr1 (184-271)||(21222029-21222124)
chr1 (185-271)||(49198491-49198585)
chr1 (184-271)||(45760234-45760329)
chr1 (184-271)||(14494093-14494185)
chr1 (188-271)||(47654577-47654669)
chr1 (184-271)||(50192775-50192870)
chr1 (180-237)||(28541381-28541438)
chr1 (183-269)||(49417964-49418058)
chr1 (186-271)||(47780502-47780595)
chr1 (201-271)||(29556006-29556080)
chr1 (184-236)||(33025393-33025445)
chr1 (186-271)||(35679352-35679445)
chr1 (177-271)||(6312447-6312550)
chr1 (237-271)||(19452032-19452066)
chr1 (191-271)||(48524208-48524295)
chr1 (196-236)||(31572430-31572470)
chr1 (180-271)||(9577656-9577755)
chr1 (179-236)||(32589221-32589279)
chr1 (237-271)||(45535886-45535920)
chr1 (186-231)||(34772311-34772356)
chr1 (181-229)||(45272465-45272513)
[»] chr5 (11 HSPs)
chr5 (173-271)||(7016920-7017026)
chr5 (184-271)||(21146955-21147050)
chr5 (178-271)||(33656266-33656368)
chr5 (188-271)||(5273184-5273276)
chr5 (186-271)||(27459172-27459265)
chr5 (183-271)||(32158122-32158218)
chr5 (187-271)||(16894083-16894174)
chr5 (186-271)||(6460682-6460775)
chr5 (184-259)||(43319134-43319218)
chr5 (188-271)||(9689553-9689643)
chr5 (189-232)||(7948587-7948630)
[»] chr4 (31 HSPs)
chr4 (178-271)||(22201896-22201997)
chr4 (183-271)||(25331017-25331113)
chr4 (186-271)||(24131196-24131289)
chr4 (184-271)||(1044697-1044792)
chr4 (179-271)||(41320632-41320730)
chr4 (187-271)||(46635866-46635959)
chr4 (186-271)||(7249997-7250090)
chr4 (178-271)||(30009901-30010002)
chr4 (186-271)||(28541587-28541680)
chr4 (184-268)||(41881310-41881403)
chr4 (180-260)||(42786650-42786739)
chr4 (188-271)||(31314952-31315043)
chr4 (186-271)||(25504863-25504955)
chr4 (195-271)||(32951060-32951144)
chr4 (183-271)||(39479581-39479677)
chr4 (183-271)||(40537369-40537465)
chr4 (184-271)||(19741132-19741226)
chr4 (186-271)||(37046676-37046769)
chr4 (187-271)||(1112784-1112875)
chr4 (205-271)||(34228806-34228880)
chr4 (186-271)||(7007262-7007355)
chr4 (186-271)||(55302732-55302825)
chr4 (190-229)||(44775947-44775986)
chr4 (186-270)||(49469210-49469302)
chr4 (186-236)||(25445983-25446032)
chr4 (184-271)||(23464840-23464937)
chr4 (179-232)||(28847140-28847193)
chr4 (184-229)||(37915672-37915717)
chr4 (9-68)||(25893708-25893767)
chr4 (179-230)||(25935779-25935830)
chr4 (188-236)||(53275727-53275775)
[»] chr8 (19 HSPs)
chr8 (183-271)||(23115391-23115487)
chr8 (184-271)||(42735500-42735595)
chr8 (181-271)||(7507122-7507220)
chr8 (188-271)||(41478989-41479080)
chr8 (185-271)||(24214814-24214908)
chr8 (184-271)||(2705042-2705137)
chr8 (184-271)||(26374651-26374746)
chr8 (181-271)||(5576844-5576942)
chr8 (184-236)||(24502037-24502089)
chr8 (184-265)||(26373692-26373782)
chr8 (185-271)||(32711505-32711599)
chr8 (188-271)||(43959549-43959641)
chr8 (186-236)||(42937250-42937300)
chr8 (170-230)||(8543393-8543453)
chr8 (177-230)||(29260316-29260369)
chr8 (189-271)||(39189994-39190084)
chr8 (186-271)||(42938340-42938433)
chr8 (181-230)||(1606053-1606102)
chr8 (179-235)||(41069798-41069854)
[»] chr7 (26 HSPs)
chr7 (183-271)||(44343619-44343715)
chr7 (184-271)||(30440685-30440780)
chr7 (186-271)||(43581313-43581406)
chr7 (180-268)||(8078280-8078376)
chr7 (180-268)||(18914961-18915057)
chr7 (183-271)||(34695119-34695215)
chr7 (188-271)||(20275486-20275577)
chr7 (183-271)||(34008903-34008996)
chr7 (186-271)||(39219558-39219651)
chr7 (184-271)||(12893297-12893392)
chr7 (178-236)||(31401579-31401637)
chr7 (186-271)||(973074-973168)
chr7 (183-271)||(40996872-40996969)
chr7 (188-271)||(727405-727496)
chr7 (189-271)||(7719483-7719574)
chr7 (186-271)||(31638766-31638859)
chr7 (187-271)||(32143142-32143235)
chr7 (189-268)||(43679363-43679451)
chr7 (177-271)||(7113335-7113440)
chr7 (182-236)||(9179763-9179817)
chr7 (186-268)||(47879059-47879149)
chr7 (186-268)||(47914157-47914247)
chr7 (237-271)||(34695223-34695257)
chr7 (181-271)||(29614987-29615085)
chr7 (183-271)||(7993023-7993119)
chr7 (189-271)||(9882459-9882549)
[»] chr6 (8 HSPs)
chr6 (179-271)||(2300961-2301061)
chr6 (186-271)||(1391513-1391606)
chr6 (184-271)||(6197701-6197796)
chr6 (184-271)||(29076484-29076580)
chr6 (184-271)||(29111457-29111553)
chr6 (180-271)||(7051728-7051827)
chr6 (237-271)||(28002613-28002647)
chr6 (181-229)||(34759284-34759332)
[»] chr2 (23 HSPs)
chr2 (182-271)||(31170850-31170947)
chr2 (176-268)||(9120049-9120149)
chr2 (184-271)||(24776244-24776339)
chr2 (185-271)||(16269581-16269675)
chr2 (185-271)||(20605042-20605136)
chr2 (180-271)||(305692-305792)
chr2 (187-271)||(14198802-14198894)
chr2 (187-271)||(44765667-44765759)
chr2 (180-271)||(22551989-22552088)
chr2 (180-271)||(35316947-35317046)
chr2 (183-268)||(12407268-12407361)
chr2 (183-271)||(26601426-26601522)
chr2 (184-271)||(1789331-1789426)
chr2 (190-271)||(5093273-5093352)
chr2 (197-271)||(32125152-32125234)
chr2 (185-232)||(14920619-14920666)
chr2 (184-271)||(378868-378963)
chr2 (237-271)||(20605186-20605220)
chr2 (183-235)||(19144912-19144964)
chr2 (185-233)||(43847536-43847584)
chr2 (179-271)||(28844439-28844539)
chr2 (184-271)||(33135512-33135607)
chr2 (5-49)||(41725924-41725968)
[»] scaffold0113 (1 HSPs)
scaffold0113 (178-236)||(39120-39178)
[»] scaffold0037 (1 HSPs)
scaffold0037 (183-236)||(100098-100151)
[»] scaffold0400 (1 HSPs)
scaffold0400 (184-271)||(15257-15349)
[»] scaffold0365 (1 HSPs)
scaffold0365 (184-271)||(15900-15992)
[»] scaffold0651 (1 HSPs)
scaffold0651 (188-271)||(8654-8745)
[»] scaffold0151 (1 HSPs)
scaffold0151 (186-260)||(38755-38837)
[»] scaffold0004 (1 HSPs)
scaffold0004 (186-232)||(102026-102072)
[»] scaffold0922 (1 HSPs)
scaffold0922 (180-229)||(4083-4133)
[»] scaffold0276 (1 HSPs)
scaffold0276 (237-271)||(763-797)
[»] scaffold0016 (1 HSPs)
scaffold0016 (184-230)||(81822-81868)


Alignment Details
Target: chr3 (Bit Score: 177; Significance: 3e-95; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 48712905 - 48713089
Alignment:
Q  1 agtttttgatttttgtgaattgacaaatacattcatgaaattgtaaaatgtaattcaaaatggtccctccgtcaaaatttgatgttagaaattatgacgt 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48712905 agtttctgatttttgtgaattgacaaatacattcatgaaattgtaaaatgtaattcaaaatggtccctccgtcaaaatttgatgttagaaattatgacgt 48713004  T
Q  101 ggtgcgttaattgaacatgccacattgtatgttatcctgcgtcaatgtaaactcatcatggactaattagcctacgaaatttagg 185  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48713005 ggtgcgttaattgaacatgccgcattgtatgttatcctgcgtcaatgtaaactcatcatggactaattagcctacgaaatttagg 48713089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 269 - 363
Target Start/End: Original strand, 48713099 - 48713193
Alignment:
Q  269 aaacaaatcgtcactaattccaattgttcaaaaactaactacagacaaattagtcattgggagatctaaatttcataggcaaataagtcgttact 363  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48713099 aaacaaatcgtcactaattccaaatgttcaaaaactaactacagacaaattagtcattgggagatctaaatttcataggcaaataagtcgttact 48713193  T

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Target: chr3; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 180 - 271
Target Start/End: Original strand, 19253710 - 19253809
Alignment:
Q  180 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  19253710 tttagggggtttattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 19253809  T

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Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 183 - 267
Target Start/End: Complemental strand, 996405 - 996313
Alignment:
Q  183 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatt 267  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  996405 agggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatt 996313  T

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Target: chr3; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 3206514 - 3206420
Alignment:
Q  185 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||        ||||||||||||||||||||||||| |||||||||    
T  3206514 ggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaa 3206420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 181 - 271
Target Start/End: Complemental strand, 10139468 - 10139370
Alignment:
Q  181 ttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  10139468 ttagggggtgtattgaatcatgattctaagggattttaaaatacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 10139370  T

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Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 271
Target Start/End: Original strand, 20498097 - 20498191
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||||||        |||||||||||||||||||||||||||||||||||    
T  20498097 gggggtgtattggatcatgattctaagggattttaaaagac-tttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 20498191  T

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Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 37820794 - 37820701
Alignment:
Q  186 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||| |||||||| |||||||||| ||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  37820794 gggtatattggataatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 37820701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 184 - 259
Target Start/End: Complemental strand, 12734159 - 12734076
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactct 259  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||        |||||||||||||||||||||||    
T  12734159 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactct 12734076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 180 - 271
Target Start/End: Complemental strand, 51699802 - 51699703
Alignment:
Q  180 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatc--------atgttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||||| |||| |||||||||||| |||||||||        || ||||||||||||||||||||||||| |||||||||    
T  51699802 tttagggggtgtattggatcatgattataaaagattttaaaagatttttttatcaagaaaaaattttgtggtattcaatcaagactcttttcaatttaaa 51699703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 35337620 - 35337717
Alignment:
Q  183 agggggtgtattgga-tcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||| || |||||||||||| |||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||    
T  35337620 agggggtgtatttgaatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 35337717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 33808128 - 33808070
Alignment:
Q  177 aaatttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcat 235  Q
    |||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  33808128 aaatgtagggggtgtattgaatcatgattctaagggattttaaaagacttttttatcat 33808070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 16010750 - 16010802
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg 236  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  16010750 gggggtgtattggatcataattctaagggattttaaaagacttttttatcatg 16010802  T

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Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 261
Target Start/End: Complemental strand, 33996809 - 33996733
Alignment:
Q  185 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgttgtggtattcaatcaagactcttt 261  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||     |||||||||||||| |||||    
T  33996809 ggggtgtattggatcatgattctaagggattttgaaagacttttttatcatgaaaaagtattcaatcaagattcttt 33996733  T

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Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 271
Target Start/End: Original strand, 54625481 - 54625574
Alignment:
Q  186 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||||||||||||  ||||||| |||| ||||||||||||        |||| ||||||||||||||||||||||||||||||    
T  54625481 gggtgtattggatcatgattctaagagattttagaagatttttttatcatgaaatttttttgtagtattcaatcaagactctttccaatttaaa 54625574  T

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Target: chr3; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 179 - 271
Target Start/End: Original strand, 25418248 - 25418348
Alignment:
Q  179 atttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaa 270  Q
    ||||||||||| |||||||||||||||||||  |||||||||| | ||||||||||||        ||||||||||||||||| |||||||||| |||||    
T  25418248 atttagggggtttattggatcatgattctaagagattttaaaaaatttttttatcatgaaaattttttgtggtattcaatcaaaactctttccattttaa 25418347  T
Q  271 a 271  Q
    |    
T  25418348 a 25418348  T

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Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 22057651 - 22057696
Alignment:
Q  185 ggggtgtattggatcatgattctaaaggattttaaaagactttttt 230  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  22057651 ggggtgtattggatcatgattctaagggattttaaaagactttttt 22057696  T

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Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 189 - 267
Target Start/End: Original strand, 29029898 - 29029984
Alignment:
Q  189 tgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatt 267  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||        |||||||||||||||||||||| ||| ||||    
T  29029898 tgtattggatcatgattctaagggattttaaaagacttttatatcatgaaaaaatattgtggtattcaatcaagactcattctaatt 29029984  T

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Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 29449180 - 29449090
Alignment:
Q  183 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaa 265  Q
    |||||||||||| |||||||||| ||| |||||||||||||||||||||| |||        ||||||||||||||||| |||||||||||    
T  29449180 agggggtgtattagatcatgattataagggattttaaaagacttttttattatgaaaaaatcttgtggtattcaatcaatactctttccaa 29449090  T

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Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 40246731 - 40246817
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttc 262  Q
    ||||||||||||||||||||||||||  |||||||||| ||||||||||| ||        ||||||||||||||||||||||||||    
T  40246731 gggggtgtattggatcatgattctaagagattttaaaaaacttttttatcgtgaaaaagtcttgtggtattcaatcaagactctttc 40246817  T

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Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 6589449 - 6589546
Alignment:
Q  183 agggggtgtattggatcatgattctaaaggattttaaaagac-ttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||| ||||||||||||||||||||| ||| |||||||||| ||||||||||||        |||||||||||||| ||||||||||| ||||||||    
T  6589449 aggggatgtattggatcatgattctaagggactttaaaagactttttttatcatgaaaaagtcttgtggtattcaattaagactctttctaatttaaa 6589546  T

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Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 52114418 - 52114469
Alignment:
Q  185 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg 236  Q
    |||||||| |||||||||||||||| | ||||||||||| ||||||||||||    
T  52114418 ggggtgtactggatcatgattctaaggaattttaaaagatttttttatcatg 52114469  T

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Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 271
Target Start/End: Complemental strand, 15494054 - 15493955
Alignment:
Q  180 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||| |||||||||| || ||||||| ||||||||||||||||||| || |||        |||| ||||| |||||||||||||| |||||||||    
T  15494054 tttaggggatgtattggattataattctaagggattttaaaagactttttaattatgaaaaaatcttgtagtatttaatcaagactctttgcaatttaaa 15493955  T

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Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 271
Target Start/End: Complemental strand, 23753705 - 23753610
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||| |||||||||| | ||||||| |||||||||||||||||||| || |||        ||||||||||||||||||||| ||| |||||||||    
T  23753705 ggggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 23753610  T

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Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 271
Target Start/End: Complemental strand, 36674456 - 36674354
Alignment:
Q  178 aatttaggggg-tgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaattt 268  Q
    ||||||||||| |||||||||| | |||||||  ||||||||||||||||||| || |||        ||||||||||||||||||||| ||| ||||||    
T  36674456 aatttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaattt 36674357  T
Q  269 aaa 271  Q
    |||    
T  36674356 aaa 36674354  T

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Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 232
Target Start/End: Original strand, 27899277 - 27899321
Alignment:
Q  188 gtgtattggatcatgattctaaaggattttaaaagacttttttat 232  Q
    ||||||| ||| ||||||||||| |||||||||||||||||||||    
T  27899277 gtgtattagattatgattctaaatgattttaaaagacttttttat 27899321  T

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Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 271
Target Start/End: Complemental strand, 44762334 - 44762261
Alignment:
Q  206 ctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||| |||||||||||||||||||||| |||        ||||||||||||||||||||||||| |||||||||    
T  44762334 ctaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaa 44762261  T

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Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 229
Target Start/End: Original strand, 48379050 - 48379090
Alignment:
Q  189 tgtattggatcatgattctaaaggattttaaaagacttttt 229  Q
    |||||||||| ||||||||| ||||||||||||||||||||    
T  48379050 tgtattggattatgattctataggattttaaaagacttttt 48379090  T

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Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 267
Target Start/End: Complemental strand, 6131470 - 6131440
Alignment:
Q  237 ttgtggtattcaatcaagactctttccaatt 267  Q
    |||||||||||||||||||||||||||||||    
T  6131470 ttgtggtattcaatcaagactctttccaatt 6131440  T

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Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 271
Target Start/End: Complemental strand, 53929376 - 53929342
Alignment:
Q  237 ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||||||||||||| |||||||||    
T  53929376 ttgtggtattcaatcaagactcttttcaatttaaa 53929342  T

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Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 19552235 - 19552186
Alignment:
Q  183 agggggtgtattggatcatgattctaaaggattttaaaagacttttttat 232  Q
    ||||||||||||||||   |||| ||||||||||||||||| ||||||||    
T  19552235 agggggtgtattggattgagattttaaaggattttaaaagatttttttat 19552186  T

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Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 230
Target Start/End: Complemental strand, 26006072 - 26006023
Alignment:
Q  181 ttagggggtgtattggatcatgattctaaaggattttaaaagactttttt 230  Q
    ||||||||||||||||||   ||||  |||||||||||||||||||||||    
T  26006072 ttagggggtgtattggattgagatttcaaaggattttaaaagactttttt 26006023  T

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Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 271
Target Start/End: Complemental strand, 39842751 - 39842653
Alignment:
Q  181 ttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||| |||||||||| | |||||||  ||||||||||||||||||| || |||        ||||||||||||||||||||| ||| ||| |||||    
T  39842751 ttaggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgcaacttaaa 39842653  T

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Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 45927034 - 45926990
Alignment:
Q  185 ggggtgtattggatcatgattctaaaggattttaaaagacttttt 229  Q
    ||||||||||||||   |||| |||||||||||||||||||||||    
T  45927034 ggggtgtattggattgagattttaaaggattttaaaagacttttt 45926990  T

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Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 50900531 - 50900487
Alignment:
Q  186 gggtgtattggatcatgattctaaaggattttaaaagactttttt 230  Q
    ||||||||||||| | ||||  |||||||||||||||||||||||    
T  50900531 gggtgtattggattaagatttcaaaggattttaaaagactttttt 50900487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 221
Target Start/End: Original strand, 52079881 - 52079917
Alignment:
Q  185 ggggtgtattggatcatgattctaaaggattttaaaa 221  Q
    |||||||||||||||||||||||||  ||||||||||    
T  52079881 ggggtgtattggatcatgattctaagtgattttaaaa 52079917  T

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Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 184 - 271
Target Start/End: Original strand, 22183251 - 22183346
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  22183251 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 22183346  T

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Target: chr1; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 181 - 271
Target Start/End: Original strand, 953697 - 953795
Alignment:
Q  181 ttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  953697 ttagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 953795  T

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Target: chr1; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 180 - 271
Target Start/End: Complemental strand, 6304577 - 6304478
Alignment:
Q  180 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||        ||||||||||||||||||||| |||||||||||||    
T  6304577 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttttcatgaaaaagtcttgtggtattcaatcaagactatttccaatttaaa 6304478  T

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Target: chr1; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 180 - 271
Target Start/End: Complemental strand, 28824695 - 28824596
Alignment:
Q  180 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||        |||||||||||||||||||||||||| ||||||||    
T  28824695 tttagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttctaatttaaa 28824596  T

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Target: chr1; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 184 - 271
Target Start/End: Complemental strand, 19452169 - 19452074
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||        |||||||||||||||||||||||||||||||||||    
T  19452169 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcttgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 19452074  T

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Target: chr1; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 185 - 271
Target Start/End: Original strand, 35279554 - 35279648
Alignment:
Q  185 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  35279554 ggggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 35279648  T

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Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 271
Target Start/End: Original strand, 730030 - 730124
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||        |||||||||||||||||||||||||||||||||||    
T  730030 gggggtgtattggatcatgattctaagggattttaaaagactttttt-tcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 730124  T

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Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 271
Target Start/End: Original strand, 21222029 - 21222124
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||        ||||||||||||||||||||||||| |||||||||    
T  21222029 gggggtgtattggatcatgattctaagggattttaaaaggcttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaa 21222124  T

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Target: chr1; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 49198585 - 49198491
Alignment:
Q  185 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||        ||||||||||||||||||||||||| |||||||||    
T  49198585 ggggtgtattggatcatgattctaaggaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaa 49198491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 184 - 271
Target Start/End: Complemental strand, 45760329 - 45760234
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||        ||||||||||||||||| ||||||| |||||||||    
T  45760329 gggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaaaactcttttcaatttaaa 45760234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 184 - 271
Target Start/End: Original strand, 14494093 - 14494185
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||||| ||   |||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  14494093 gggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaa 14494185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 271
Target Start/End: Complemental strand, 47654669 - 47654577
Alignment:
Q  188 gtgtattggatcatgattctaaaggattttaaaagactt-ttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||        ||||||||||| |||||||||||||||||||||||    
T  47654669 gtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcgatcaagactctttccaatttaaa 47654577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 184 - 271
Target Start/End: Complemental strand, 50192870 - 50192775
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||| ||||||||||||| | |||||||||||||||||||| |||        ||||||||||||||||||| |||||||||||||||    
T  50192870 gggggtgtattgaatcatgattctaaggaattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagattctttccaatttaaa 50192775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 28541381 - 28541438
Alignment:
Q  180 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgt 237  Q
    ||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||    
T  28541381 tttagggggtgtattggatcatgattctaagcgattttaaaagatttttttatcatgt 28541438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 183 - 269
Target Start/End: Original strand, 49417964 - 49418058
Alignment:
Q  183 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaattta 269  Q
    ||||||| |||||||||||||||||||  |||||||||||||||||||||||||         |||| |||||||||||||||||||||||||||    
T  49417964 agggggtatattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcatgtgatattcaatcaagactctttccaattta 49418058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 271
Target Start/End: Original strand, 47780502 - 47780595
Alignment:
Q  186 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||||||||||||   ||||||||||| ||||||||||||        ||||||||||||||||||||||||| |||||||||    
T  47780502 gggtgtattggatcatgattctaagaaattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaa 47780595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 29556006 - 29556080
Alignment:
Q  201 tgattctaaaggattttaaaagacttttttatca----tgttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||| |||||||||||||||||||||| |    | ||||||||||||||||||||||||| |||||||||    
T  29556006 tgattctaagggattttaaaagacttttttataaaaagttttgtggtattcaatcaagactcttttcaatttaaa 29556080  T

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Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 33025393 - 33025445
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg 236  Q
    ||||||||||||||||||||||||||  || ||||||||||||||||||||||    
T  33025393 gggggtgtattggatcatgattctaagagaatttaaaagacttttttatcatg 33025445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 35679445 - 35679352
Alignment:
Q  186 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||| ||||||||| ||| |||||||||||||||||||||| |||        |||||||||||||||||| |||||| |||||||||    
T  35679445 gggtgtattgaatcatgattttaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaaggctcttttcaatttaaa 35679352  T

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Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 6312447 - 6312550
Alignment:
Q  177 aaatttaggggg-tgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatt 267  Q
    |||||||||||| |||||||||| | |||||||  ||||||||||||||||||| || |||        ||||||||||||||||||||| ||| |||||    
T  6312447 aaatttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatt 6312546  T
Q  268 taaa 271  Q
    ||||    
T  6312547 taaa 6312550  T

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Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 271
Target Start/End: Complemental strand, 19452066 - 19452032
Alignment:
Q  237 ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||||||||||||||    
T  19452066 ttgtggtattcaatcaagactctttccaatttaaa 19452032  T

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Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 48524208 - 48524295
Alignment:
Q  191 tattggatcatgattctaaaggattttaaaagacttttttatcat------gttgtg--gtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||||||| | |||||||||||| ||||||||||      ||| ||  ||||||||||||||||||||||||||||||    
T  48524208 tattggatcatgattctaaggaattttaaaagac-tttttatcataaaaaagttttgcagtattcaatcaagactctttccaatttaaa 48524295  T

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Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 31572470 - 31572430
Alignment:
Q  196 gatcatgattctaaaggattttaaaagacttttttatcatg 236  Q
    |||||||||||||| ||||||||| ||||||||||||||||    
T  31572470 gatcatgattctaagggattttaagagacttttttatcatg 31572430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 271
Target Start/End: Complemental strand, 9577755 - 9577656
Alignment:
Q  180 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||| |||||||||| | ||||| || ||||||||||||||||||| || |||        ||||||||||||||||||||| ||| ||| |||||    
T  9577755 tttaggggatgtattggattaggattcgaagggattttaaaagactttttaatgatgaaaaagttttgtggtattcaatcaagactatttgcaacttaaa 9577656  T

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Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 32589279 - 32589221
Alignment:
Q  179 atttaggggg-tgtattggatcatgattctaaaggattttaaaagacttttttatcatg 236  Q
    |||||||||| |||||||||| |||||||||   |||||||||| ||||||||||||||    
T  32589279 atttagggggatgtattggattatgattctatgagattttaaaaaacttttttatcatg 32589221  T

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Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 271
Target Start/End: Original strand, 45535886 - 45535920
Alignment:
Q  237 ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||| |||||||||||||||||||||||||||||    
T  45535886 ttgtgatattcaatcaagactctttccaatttaaa 45535920  T

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Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 34772311 - 34772356
Alignment:
Q  186 gggtgtattggatcatgattctaaaggattttaaaagactttttta 231  Q
    |||||||||||||  |||||  ||||||||||||||||||||||||    
T  34772311 gggtgtattggattgtgatttcaaaggattttaaaagactttttta 34772356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 45272465 - 45272513
Alignment:
Q  181 ttagggggtgtattggatcatgattctaaaggattttaaaagacttttt 229  Q
    ||||||| |||||||||| | |||||||  |||||||||||||||||||    
T  45272465 ttaggggatgtattggattaagattctatgggattttaaaagacttttt 45272513  T

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Target: chr5 (Bit Score: 66; Significance: 4e-29; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 173 - 271
Target Start/End: Complemental strand, 7017026 - 7016920
Alignment:
Q  173 tacgaaatttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttcca 264  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||        ||||||||||||||||||||||||| ||    
T  7017026 tacgcaatttagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttca 7016927  T
Q  265 atttaaa 271  Q
    |||||||    
T  7016926 atttaaa 7016920  T

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Target: chr5; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 184 - 271
Target Start/End: Original strand, 21146955 - 21147050
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||    
T  21146955 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcgtgtggtattcaatcaagactctttccaatttaaa 21147050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 178 - 271
Target Start/End: Complemental strand, 33656368 - 33656266
Alignment:
Q  178 aatttagg-gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaattt 268  Q
    |||||||| |||||||||||||||||||| ||| ||||||||||||| ||||||||||||        ||||||||||||||||||||||||| ||||||    
T  33656368 aatttaggagggtgtattggatcatgattttaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaattt 33656269  T
Q  269 aaa 271  Q
    |||    
T  33656268 aaa 33656266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 188 - 271
Target Start/End: Complemental strand, 5273276 - 5273184
Alignment:
Q  188 gtgtattggatcatgattctaaaggattttaaaagacttttttatcatg---------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||         ||||||||||||||||||| |||||||||||||||    
T  5273276 gtgtattggatcatgattttaagggattttaaaagacttttttatcatgaaaaaaatcttgtggtattcaatcaagattctttccaatttaaa 5273184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 27459265 - 27459172
Alignment:
Q  186 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||        | || ||||||||||||||||||||||||||||||    
T  27459265 gggtgtattggatcatgattctaacggattttaaaaaacttttttatcatgaaaaagtctcgtagtattcaatcaagactctttccaatttaaa 27459172  T

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Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 32158218 - 32158122
Alignment:
Q  183 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||| ||||| ||||||||||||| | ||||||||||||||||||||||||        ||||||||||||||||||||||||| |||||||||    
T  32158218 agggggtatattgaatcatgattctaaggaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaa 32158122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 187 - 271
Target Start/End: Complemental strand, 16894174 - 16894083
Alignment:
Q  187 ggtgtattggatcatgattctaaaggattttaaaagacttttttatca-------tgttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||       | ||||||||||||||||| | |||||||||||||||    
T  16894174 ggtgtattggatcataattctaagggattttaaaagacttttttatcataaaaattcttgtggtattcaatcaaaattctttccaatttaaa 16894083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 271
Target Start/End: Original strand, 6460682 - 6460775
Alignment:
Q  186 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||| ||||||||||||| ||||||||||||| |||||||| |||        ||||||||||||||||||||||||||||| |||||    
T  6460682 gggtgtattgaatcatgattctaagggattttaaaagatttttttataatgaaaaagtcttgtggtattcaatcaagactctttccaacttaaa 6460775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 43319134 - 43319218
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagac-ttttttatcatg--------ttgtggtattcaatcaagactct 259  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||        |||||||||||||||||||||||    
T  43319134 gggggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactct 43319218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 271
Target Start/End: Original strand, 9689553 - 9689643
Alignment:
Q  188 gtgtattggatcatgattctaaaggattttaaaagacttttt--tatca-----tgttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||| |||||||||| ||||||||| |||||||||  ||| |     | ||||||||||||||||||||||||||||| |||||    
T  9689553 gtgtattggattatgattctaagggattttaatagactttttattatgaaaaagtcttgtggtattcaatcaagactctttccaacttaaa 9689643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 189 - 232
Target Start/End: Complemental strand, 7948630 - 7948587
Alignment:
Q  189 tgtattggatcatgattctaaaggattttaaaagacttttttat 232  Q
    |||||||||| | ||||||| |||||||||||||||||||||||    
T  7948630 tgtattggattaggattctataggattttaaaagacttttttat 7948587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 178 - 271
Target Start/End: Original strand, 22201896 - 22201997
Alignment:
Q  178 aatttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaattta 269  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||        ||||| |||||||||||||||||||||||||||    
T  22201896 aatttagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaattta 22201995  T
Q  270 aa 271  Q
    ||    
T  22201996 aa 22201997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 25331017 - 25331113
Alignment:
Q  183 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  25331017 agggggtgtattggatcatgattctaaaagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 25331113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 24131289 - 24131196
Alignment:
Q  186 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  24131289 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 24131196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 184 - 271
Target Start/End: Original strand, 1044697 - 1044792
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||        |||||||||||||||||||||||||||||||||||    
T  1044697 gggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 1044792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 179 - 271
Target Start/End: Original strand, 41320632 - 41320730
Alignment:
Q  179 atttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcat------gttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||      || ||||||||||||||||||| |||||||||||||    
T  41320632 atttagggggtgtattggatcatgattctaaaagattttaaaagatttttttattatgaaaaagtcgtggtattcaatcaagactgtttccaatttaaa 41320730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 187 - 271
Target Start/End: Complemental strand, 46635959 - 46635866
Alignment:
Q  187 ggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg---------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||    
T  46635959 ggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 46635866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 7250090 - 7249997
Alignment:
Q  186 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||        ||||||||||||||||||||||||| |||||||||    
T  7250090 gggtgtattggatcatgattctaaggaattttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactcttttcaatttaaa 7249997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 271
Target Start/End: Complemental strand, 30010002 - 30009901
Alignment:
Q  178 aatttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaattta 269  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||        || | ||||||||||||||||||||||||||||    
T  30010002 aatttagggggtgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaagtcttattgtattcaatcaagactctttccaattta 30009903  T
Q  270 aa 271  Q
    ||    
T  30009902 aa 30009901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 186 - 271
Target Start/End: Original strand, 28541587 - 28541680
Alignment:
Q  186 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||| |||        ||||||||||||||||||||||||| |||||||||    
T  28541587 gggtgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaa 28541680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 41881403 - 41881310
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagactt-ttttatcatg--------ttgtggtattcaatcaagactctttccaattt 268  Q
    |||||||||||||||||||||| ||| |||||||||||||||| ||||||||||        ||||||||||||||||||||||||||||||||    
T  41881403 gggggtgtattggatcatgattttaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattt 41881310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 180 - 260
Target Start/End: Original strand, 42786650 - 42786739
Alignment:
Q  180 tttagggggtgtattggatcatgattctaaaggattttaaaagac-ttttttatcatg--------ttgtggtattcaatcaagactctt 260  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||        ||||||||||||||||||||||||    
T  42786650 tttagggggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 42786739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 188 - 271
Target Start/End: Complemental strand, 31315043 - 31314952
Alignment:
Q  188 gtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||        ||||||||||||||||||||| ||| |||||||||    
T  31315043 gtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtattgtggtattcaatcaagacttttttcaatttaaa 31314952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 25504955 - 25504863
Alignment:
Q  186 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||| | |||||| ||||||||||| ||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  25504955 gggtgtattggatcagg-ttctaatggattttaaaatacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 25504863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 195 - 271
Target Start/End: Complemental strand, 32951144 - 32951060
Alignment:
Q  195 ggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||| |||||||||||||||||||||| |||        ||||||||||||||||||||||||| |||||||||    
T  32951144 ggatcatgattctaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaa 32951060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 39479677 - 39479581
Alignment:
Q  183 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatca--------tgttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||||||||||| |||   ||||||||||||||||||||||        | ||||||||||||||||||||||||| |||||||||    
T  39479677 agggggtgtattggatcatgattttaagaaattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactcttttcaatttaaa 39479581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 40537465 - 40537369
Alignment:
Q  183 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatca--------tgttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||| |||||        | |||||||||||||| ||||||||||| ||||||||    
T  40537465 agggggtgtattggatcatgattgtaagggattttaaaagacttttgtatcataaaaaagtcttgtggtattcaattaagactctttctaatttaaa 40537369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 271
Target Start/End: Complemental strand, 19741226 - 19741132
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||| ||||||  |||||||||||||| |||||||||||||||||| ||||||        |||||||||||||||||||||||||||||||||||    
T  19741226 ggggatgtattcaatcatgattctaaaagattttaaaagacttttt-atcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaa 19741132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 37046769 - 37046676
Alignment:
Q  186 gggtgtattggatcatgattctaaaggattttaaaagacttttttatca--------tgttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||| | |||||||||||  |||||||||        | ||||||||||||||||||||||||| |||||||||    
T  37046769 gggtgtattggatcatgattctaaggaattttaaaagatatttttatcataaaaaagtcttgtggtattcaatcaagactcttttcaatttaaa 37046676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 1112784 - 1112875
Alignment:
Q  187 ggtgtattggatcatgattctaaaggattttaaaagac-ttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||  ||||||||||||| ||||||||||||        ||||| ||||||||||||||||||||| |||||||    
T  1112784 ggtgtattggatcatgattctaa--gattttaaaagactttttttatcatgaaaaagtcttgtgttattcaatcaagactctttccgatttaaa 1112875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 271
Target Start/End: Complemental strand, 34228880 - 34228806
Alignment:
Q  205 tctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||| ||||||||||||||||||||||||||        ||||||||||||||||||||||||| |||||||||    
T  34228880 tctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaa 34228806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 186 - 271
Target Start/End: Original strand, 7007262 - 7007355
Alignment:
Q  186 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||| |||| ||||||||| ||| ||||||||| |||||||||||| |||        ||||||||||||||||||||||||| |||||||||    
T  7007262 gggtggattgaatcatgattttaagggattttaatagacttttttataatgaaaaagttttgtggtattcaatcaagactcttttcaatttaaa 7007355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 186 - 271
Target Start/End: Original strand, 55302732 - 55302825
Alignment:
Q  186 gggtgtattggatcatgattctaaaggattttaaaagacttttttatca--------tgttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||| ||||||||| ||| |||||||| ||||||||||||| |        |||| |||||||||||||||||||||| |||||||||    
T  55302732 gggtgtattgaatcatgattttaagggattttagaagacttttttataatgaaaaagtgttatggtattcaatcaagactcttttcaatttaaa 55302825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 44775986 - 44775947
Alignment:
Q  190 gtattggatcatgattctaaaggattttaaaagacttttt 229  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  44775986 gtattggatcatgattctaatggattttaaaagacttttt 44775947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 270
Target Start/End: Original strand, 49469210 - 49469302
Alignment:
Q  186 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaa 270  Q
    ||||||||||||||||||||| || | |||||||||||||||||| |  ||        |||||||||| |||||||||||||||||||||||    
T  49469210 gggtgtattggatcatgattccaaggaattttaaaagactttttttttgtgaagaagtcttgtggtatttaatcaagactctttccaatttaa 49469302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 25445983 - 25446032
Alignment:
Q  186 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg 236  Q
    ||||||||||||| |||||| ||| ||||||||||||||||||||||||||    
T  25445983 gggtgtattggat-atgattttaagggattttaaaagacttttttatcatg 25446032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 271
Target Start/End: Original strand, 23464840 - 23464937
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagactttttt--atcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||| |||||||||| |||||||||| | ||||||||||| ||||||  ||||||        |||||||||||||||||||||||||||||| ||||    
T  23464840 ggggatgtattggattatgattctaaggaattttaaaagatttttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatataaa 23464937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 28847193 - 28847140
Alignment:
Q  179 atttagggggtgtattggatcatgattctaaaggattttaaaagacttttttat 232  Q
    ||||||||| ||||||||||   |||| ||||||||||||||||||||||||||    
T  28847193 atttaggggatgtattggattgagattttaaaggattttaaaagacttttttat 28847140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 37915672 - 37915717
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttt 229  Q
    ||||||||||||||| |||||||||  |||||||||||||||||||    
T  37915672 gggggtgtattggattatgattctatgggattttaaaagacttttt 37915717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 25893708 - 25893767
Alignment:
Q  9 atttttgtgaattgacaaatacattcatgaaattgtaaaatgtaattcaaaatggtccct 68  Q
    |||||||  |||||| |||||||| ||||||||||||||||||  |||||||| ||||||    
T  25893708 atttttgcaaattgataaatacatccatgaaattgtaaaatgttgttcaaaatagtccct 25893767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 25935779 - 25935830
Alignment:
Q  179 atttagggggtgtattggatcatgattctaaaggattttaaaagactttttt 230  Q
    ||||||||||||||||||||   ||||  |||||||||||||||||||||||    
T  25935779 atttagggggtgtattggattgagatttcaaaggattttaaaagactttttt 25935830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 53275727 - 53275775
Alignment:
Q  188 gtgtattggatcatgattctaaaggattttaaaagacttttttatcatg 236  Q
    |||||||||||||||||||||| | ||||||||| |  |||||||||||    
T  53275727 gtgtattggatcatgattctaaggaattttaaaaaatatttttatcatg 53275775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 7e-28; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 23115487 - 23115391
Alignment:
Q  183 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  23115487 agggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 23115391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 184 - 271
Target Start/End: Complemental strand, 42735595 - 42735500
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  42735595 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 42735500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 181 - 271
Target Start/End: Complemental strand, 7507220 - 7507122
Alignment:
Q  181 ttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  7507220 ttagagggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 7507122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 188 - 271
Target Start/End: Original strand, 41478989 - 41479080
Alignment:
Q  188 gtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  41478989 gtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 41479080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 24214908 - 24214814
Alignment:
Q  185 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatca--------tgttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||        | ||||||||||||||||||||||||| |||||||||    
T  24214908 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactcttttcaatttaaa 24214814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 271
Target Start/End: Complemental strand, 2705137 - 2705042
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||        ||||||||||||||||||||||||||||| |||||    
T  2705137 gggggtgtattggatcatgattgtaaaggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaaattaaa 2705042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 271
Target Start/End: Complemental strand, 26374746 - 26374651
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||        ||||| |||||||||||||||||||||||||||||    
T  26374746 ggggatgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaa 26374651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 181 - 271
Target Start/End: Complemental strand, 5576942 - 5576844
Alignment:
Q  181 ttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||| |||||||||| ||||||||||||| |||||| |||||        |||||||||||||||||||||||||||||||||||    
T  5576942 ttagggggtgtattggattatgattctaagggattttaaaagatttttttgtcatgaaatagtcttgtggtattcaatcaagactctttccaatttaaa 5576844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 24502089 - 24502037
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24502089 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg 24502037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 184 - 265
Target Start/End: Original strand, 26373692 - 26373782
Alignment:
Q  184 gggggtgtattgg-atcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaa 265  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  26373692 gggggtgtattgggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaa 26373782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 32711599 - 32711505
Alignment:
Q  185 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||||  || ||||||||||||||||||||||        ||||||||||||||||||||||||| |||||||||    
T  32711599 ggggtgtattggatcatgattctaagagactttaaaagacttttttatcatgaaaaagttttgtggtattcaatcaagactcttttcaatttaaa 32711505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 271
Target Start/End: Original strand, 43959549 - 43959641
Alignment:
Q  188 gtgtattggatcatgattctaaaggattttaaaagac-ttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||| |||||||||| |||||||||||||||||| ||||||||||||        |||||||||||||||||||||||||||||||||||    
T  43959549 gtgtatttgatcatgattttaaaggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 43959641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 42937250 - 42937300
Alignment:
Q  186 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg 236  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  42937250 gggtgtattggatcatgattttaagggattttaaaagacttttttatcatg 42937300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 8543393 - 8543453
Alignment:
Q  170 gcctacgaaatttagggggtgtattggatcatgattctaaaggattttaaaagactttttt 230  Q
    ||||||||| || |||||||||||| |||||||||||||| ||||||||||||| ||||||    
T  8543393 gcctacgaacttaagggggtgtattagatcatgattctaagggattttaaaagattttttt 8543453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 29260369 - 29260316
Alignment:
Q  177 aaatttagggggtgtattggatcatgattctaaaggattttaaaagactttttt 230  Q
    ||||||||||||||||||||||   |||| ||||||||||||||||||||||||    
T  29260369 aaatttagggggtgtattggattgagattttaaaggattttaaaagactttttt 29260316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 271
Target Start/End: Complemental strand, 39190084 - 39189994
Alignment:
Q  189 tgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||| | |||||||| ||||||||||||||||||| || |||        ||||||||||||||||||||||||| |||||||||    
T  39190084 tgtattggattaggattctaagggattttaaaagactttttaattatgaattttttttgtggtattcaatcaagactctttgcaatttaaa 39189994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 42938433 - 42938340
Alignment:
Q  186 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||| |||||||| || ||| ||| ||||||||||||||||||||| ||||        ||||||||||||||||||||||||| |||||||||    
T  42938433 gggtttattggattataattttaagggattttaaaagacttttttaccatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaa 42938340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 230
Target Start/End: Complemental strand, 1606102 - 1606053
Alignment:
Q  181 ttagggggtgtattggatcatgattctaaaggattttaaaagactttttt 230  Q
    ||||||||||||||||||   ||||  |||||||||||||||||||||||    
T  1606102 ttagggggtgtattggattgagatttcaaaggattttaaaagactttttt 1606053  T

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Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 41069798 - 41069854
Alignment:
Q  179 atttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcat 235  Q
    |||||||||||||||| ||| | |||| ||| ||||||||||||| ||||| |||||    
T  41069798 atttagggggtgtattagattaagattttaagggattttaaaagattttttcatcat 41069854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 7e-28; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 44343715 - 44343619
Alignment:
Q  183 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  44343715 agggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 44343619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 184 - 271
Target Start/End: Original strand, 30440685 - 30440780
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  30440685 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaa 30440780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 43581406 - 43581313
Alignment:
Q  186 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  43581406 gggtgtattggatcatgattctaaagaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 43581313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 180 - 268
Target Start/End: Original strand, 8078280 - 8078376
Alignment:
Q  180 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatca--------tgttgtggtattcaatcaagactctttccaattt 268  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||        | ||||||||||||||||||||||||||||||||    
T  8078280 tttagggggtgtattggatcatgattctaagggattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactctttccaattt 8078376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 180 - 268
Target Start/End: Complemental strand, 18915057 - 18914961
Alignment:
Q  180 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaattt 268  Q
    |||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  18915057 tttagggggtgtattggatcatgtatctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattt 18914961  T

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Target: chr7; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 34695119 - 34695215
Alignment:
Q  183 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||    
T  34695119 agggggtgtattgaatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 34695215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 188 - 271
Target Start/End: Complemental strand, 20275577 - 20275486
Alignment:
Q  188 gtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||        ||||||||||||||||||| |||||||||||||||    
T  20275577 gtgtattggatcatgattctaagggattttaaaagacttttttatcatgaataagtcttgtggtattcaatcaagattctttccaatttaaa 20275486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 34008903 - 34008996
Alignment:
Q  183 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg-----ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||      | |||||||||||||||||||||| |||||||||    
T  34008903 agggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtctggtattcaatcaagactcttttcaatttaaa 34008996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 39219651 - 39219558
Alignment:
Q  186 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  39219651 gggtgtattggatcataattctaaggaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 39219558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 184 - 271
Target Start/End: Original strand, 12893297 - 12893392
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||||| | ||||||||||| |||||| |||||        |||||||||||||||||||||||||||||||||||    
T  12893297 gggggtgtattggatcatgattctaaggtattttaaaagatttttttttcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 12893392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 31401579 - 31401637
Alignment:
Q  178 aatttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg 236  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  31401579 aatttagggggtgtattggatcatgattctaaagaactttaaaagacttttttatcatg 31401637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 271
Target Start/End: Original strand, 973074 - 973168
Alignment:
Q  186 gggtgtattggatcatgattctaaaggattttaaaaga-cttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||||        |||||||||||||||||||||||||||||||||||    
T  973074 gggtgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 973168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 40996969 - 40996872
Alignment:
Q  183 agggggtgtattggatcatgattctaaaggattttaaaaga-cttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||||||||||||||| ||||||||||| |  ||||||||||||        |||||||||||||||||||||||||||||||||||    
T  40996969 agggggtgtattggatcatgattctaagggattttaaaatattttttttatcatgaaagagtcttgtggtattcaatcaagactctttccaatttaaa 40996872  T

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Target: chr7; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 188 - 271
Target Start/End: Original strand, 727405 - 727496
Alignment:
Q  188 gtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||        ||| ||||||||||||||||||||| |||||||||    
T  727405 gtgtattggatcatgattctaatggattttaaatgacttttttatcatgaaaaagtcttgcggtattcaatcaagactcttttcaatttaaa 727496  T

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Target: chr7; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 189 - 271
Target Start/End: Complemental strand, 7719574 - 7719483
Alignment:
Q  189 tgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatc-aagactctttccaatttaaa 271  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||        ||||||||||||||| ||||||||||||||||||||    
T  7719574 tgtattggatcatgattgtaaaagattttaaaagacttttttatcatgaaaaattcttgtggtattcaatcaaagactctttccaatttaaa 7719483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 271
Target Start/End: Original strand, 31638766 - 31638859
Alignment:
Q  186 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||| |||||||||||||  |||||||||||||||||||||||||         |||||||||||||||||||||||| |||||||||    
T  31638766 gggtgtattgaatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcatgtggtattcaatcaagactcttttcaatttaaa 31638859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 271
Target Start/End: Complemental strand, 32143235 - 32143142
Alignment:
Q  187 ggtgtattggatcatgattctaaaggattttaaaagactt-ttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||        ||||| |||||||||||||||||||| ||||||||    
T  32143235 ggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctttctaatttaaa 32143142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 189 - 268
Target Start/End: Original strand, 43679363 - 43679451
Alignment:
Q  189 tgtattggatcatgattctaaaggattttaaaaga-cttttttatcatg--------ttgtggtattcaatcaagactctttccaattt 268  Q
    ||||||||||||||||||||| |||||||||||||  ||||||||||||        ||||||||||||||||||||||||||||||||    
T  43679363 tgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattt 43679451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 7113335 - 7113440
Alignment:
Q  177 aaatttagggggtgtattggatca---tgattctaaaggattttaaaagac-ttttttatcatg-------ttgtggtattcaatcaagactctttccaa 265  Q
    ||||| ||||||||||||||||||   ||||||||| |||||||||||||| ||||||||||||        | ||||||||||||||||||||||||||    
T  7113335 aaattaagggggtgtattggatcatcatgattctaagggattttaaaagactttttttatcatgacaaagtatttggtattcaatcaagactctttccaa 7113434  T
Q  266 tttaaa 271  Q
    ||||||    
T  7113435 tttaaa 7113440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 9179763 - 9179817
Alignment:
Q  182 tagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg 236  Q
    ||||||||||||||||| |  |||||||| |||||||||||||||||||||||||    
T  9179763 tagggggtgtattggattagcattctaaaagattttaaaagacttttttatcatg 9179817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 268
Target Start/End: Original strand, 47879059 - 47879149
Alignment:
Q  186 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaattt 268  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||||| |||        ||||||||||||||||| ||||||| ||||||    
T  47879059 gggtgtattgaatcatgattctaagggattttaaaagacttatttataatgaaaaagtcttgtggtattcaatcaatactcttttcaattt 47879149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 268
Target Start/End: Original strand, 47914157 - 47914247
Alignment:
Q  186 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaattt 268  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||||| |||        ||||||||||||||||| ||||||| ||||||    
T  47914157 gggtgtattgaatcatgattctaagggattttaaaagacttatttataatgaaaaagtcttgtggtattcaatcaatactcttttcaattt 47914247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 271
Target Start/End: Original strand, 34695223 - 34695257
Alignment:
Q  237 ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||||||||||||||    
T  34695223 ttgtggtattcaatcaagactctttccaatttaaa 34695257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 271
Target Start/End: Complemental strand, 29615085 - 29614987
Alignment:
Q  181 ttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||| |||||||||| |||||||||   |||||||||||||||||| || |||        ||||||||||||||||||||| ||| |||||||||    
T  29615085 ttaggggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 29614987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 7993023 - 7993119
Alignment:
Q  183 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||| |||||||||| | ||||||| |||||||||||||||||||| || |||        ||||||||||||||||||||| ||| ||| |||||    
T  7993023 aggggatgtattggattaagattctataggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaa 7993119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 271
Target Start/End: Complemental strand, 9882549 - 9882459
Alignment:
Q  189 tgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||| | ||||||| |||||||||||||||||||| || |||        || |||||||||||||||||| ||| |||||||||    
T  9882549 tgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaatttaaa 9882459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 7e-28; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 179 - 271
Target Start/End: Complemental strand, 2301061 - 2300961
Alignment:
Q  179 atttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaa 270  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||        ||||||||||||||||||||||||| ||||||||    
T  2301061 atttagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaa 2300962  T
Q  271 a 271  Q
    |    
T  2300961 a 2300961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 186 - 271
Target Start/End: Original strand, 1391513 - 1391606
Alignment:
Q  186 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  1391513 gggtgtattggatcatgattctaaaggattttaaatgacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 1391606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 271
Target Start/End: Complemental strand, 6197796 - 6197701
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||         ||||||||||||||||||||||||||||||||||    
T  6197796 gggggtgtattggatcatgattctaagggattttaaaaaacttttttatcatgaaaaagtcgtgtggtattcaatcaagactctttccaatttaaa 6197701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 271
Target Start/End: Original strand, 29076484 - 29076580
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagac-ttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||||||||||||||  ||||||||||||| ||||||||||||        ||||| |||||||||||||||||||||||||||||    
T  29076484 gggggtgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaa 29076580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 271
Target Start/End: Original strand, 29111457 - 29111553
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagac-ttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||||||||||||||  ||||||||||||| ||||||||||||        ||||| |||||||||||||||||||||||||||||    
T  29111457 gggggtgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaa 29111553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 271
Target Start/End: Original strand, 7051728 - 7051827
Alignment:
Q  180 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||| || ||| | ||||||||  |||||||||||||||||||||||||        ||||| ||||||||||||||||||| ||| |||||    
T  7051728 tttagggggtgtgtttgattaggattctaagagattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttgcaacttaaa 7051827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 271
Target Start/End: Original strand, 28002613 - 28002647
Alignment:
Q  237 ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||| ||||||||||||||||||||||||||||||    
T  28002613 ttgtcgtattcaatcaagactctttccaatttaaa 28002647  T

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Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 229
Target Start/End: Complemental strand, 34759332 - 34759284
Alignment:
Q  181 ttagggggtgtattggatcatgattctaaaggattttaaaagacttttt 229  Q
    |||||||||||||||||| | |||||||   ||||||||||||||||||    
T  34759332 ttagggggtgtattggattaggattctatgagattttaaaagacttttt 34759284  T

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Target: chr2 (Bit Score: 61; Significance: 4e-26; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 182 - 271
Target Start/End: Complemental strand, 31170947 - 31170850
Alignment:
Q  182 tagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||        ||||| |||||||||||||||||||||||||||||    
T  31170947 tagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaa 31170850  T

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Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 268
Target Start/End: Original strand, 9120049 - 9120149
Alignment:
Q  176 gaaatttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatt 267  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||    
T  9120049 gaaattaagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaaatcatgtggtattcaatcaagactctttccaatt 9120148  T
Q  268 t 268  Q
    |    
T  9120149 t 9120149  T

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Target: chr2; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 184 - 271
Target Start/End: Original strand, 24776244 - 24776339
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||        |||||||||||||||||||||||||| ||||||||    
T  24776244 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttctaatttaaa 24776339  T

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Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 185 - 271
Target Start/End: Original strand, 16269581 - 16269675
Alignment:
Q  185 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||    
T  16269581 ggggtgtattggatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 16269675  T

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Target: chr2; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 185 - 271
Target Start/End: Original strand, 20605042 - 20605136
Alignment:
Q  185 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||        |||||||||||||||||||||||||||||||||||    
T  20605042 ggggtgtattggatcatgattctaagggattttaaaagactttttaatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 20605136  T

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Target: chr2; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 180 - 271
Target Start/End: Complemental strand, 305792 - 305692
Alignment:
Q  180 tttagggggtgtattggatcatgattctaaaggattttaaaagactt-ttttatcatg--------ttgtggtattcaatcaagactctttccaatttaa 270  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||        ||||||||||||||||||||||||||||||||||    
T  305792 tttagggggtgtattggatcatgattctaagcgattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaa 305693  T
Q  271 a 271  Q
    |    
T  305692 a 305692  T

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Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 187 - 271
Target Start/End: Complemental strand, 14198894 - 14198802
Alignment:
Q  187 ggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||        |||||||||||||||||||||||||| ||||||||    
T  14198894 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttctaatttaaa 14198802  T

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Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 44765667 - 44765759
Alignment:
Q  187 ggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||        ||||||||||||||||| |||||||||||||||||    
T  44765667 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaaactctttccaatttaaa 44765759  T

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Target: chr2; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 180 - 271
Target Start/End: Complemental strand, 22552088 - 22551989
Alignment:
Q  180 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||        ||||||||||||||||||| | |||||||||||||    
T  22552088 tttagtgggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagattttttccaatttaaa 22551989  T

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Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 180 - 271
Target Start/End: Original strand, 35316947 - 35317046
Alignment:
Q  180 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||| ||||||||||| ||||||||||||| ||||||||||| ||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  35316947 tttaaggggtgtattgaatcatgattctaagggattttaaaaaacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 35317046  T

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Target: chr2; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 183 - 268
Target Start/End: Original strand, 12407268 - 12407361
Alignment:
Q  183 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaattt 268  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||        ||||||||||||||||||| ||||| ||||||    
T  12407268 agggggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagattcttttcaattt 12407361  T

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Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 26601522 - 26601426
Alignment:
Q  183 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatca--------tgttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |        | ||||||||||||||||| |||||||| ||||||||    
T  26601522 agggggtgtattggatcatgtttctaaaggattttaaaagacttttttattattaaaaagtcttgtggtattcaatcaaaactctttctaatttaaa 26601426  T

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Target: chr2; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 184 - 271
Target Start/End: Original strand, 1789331 - 1789426
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatca--------tgttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||||||||        | ||||||||||||||||| |||||||||||||||||    
T  1789331 gggggtgtattggatcatgattctaagagattttaaaagatttttttatcataaaaaagtcttgtggtattcaatcaaaactctttccaatttaaa 1789426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 271
Target Start/End: Complemental strand, 5093352 - 5093273
Alignment:
Q  190 gtattggatcatgattctaaaggattttaaaagacttttttatcatgttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||| |||||||||||||||     |  || |||||||||||||||||||||||||||||||||||    
T  5093352 gtattggatcatgattctaagggattttaaaagactgaa--aatatcttgtggtattcaatcaagactctttccaatttaaa 5093273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 32125152 - 32125234
Alignment:
Q  197 atcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||| ||| |||||||||||||||||||||| |||        ||||||||||||||||||||||||| |||||||||    
T  32125152 atcatgattttaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaa 32125234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 232
Target Start/End: Complemental strand, 14920666 - 14920619
Alignment:
Q  185 ggggtgtattggatcatgattctaaaggattttaaaagacttttttat 232  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  14920666 ggggtgtattggattgtgattttaaaggattttaaaagacttttttat 14920619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 271
Target Start/End: Original strand, 378868 - 378963
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||| ||||||||||||||||| ||| ||||||||||||||||||| || |||        ||||||||||||||||||||| ||| ||| |||||    
T  378868 ggggatgtattggatcatgattataagggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaa 378963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 271
Target Start/End: Original strand, 20605186 - 20605220
Alignment:
Q  237 ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||||||||||||||    
T  20605186 ttgtggtattcaatcaagactctttccaatttaaa 20605220  T

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Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 19144912 - 19144964
Alignment:
Q  183 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcat 235  Q
    |||||||||||||||  |||||||||| ||||||||||| | |||||||||||    
T  19144912 agggggtgtattggaatatgattctaagggattttaaaatatttttttatcat 19144964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 43847536 - 43847584
Alignment:
Q  185 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 233  Q
    |||||||||| |||||||  ||||| |||||||||||||||||||||||    
T  43847536 ggggtgtattagatcatgtatctaagggattttaaaagacttttttatc 43847584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 271
Target Start/End: Original strand, 28844439 - 28844539
Alignment:
Q  179 atttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaa 270  Q
    ||||||||| |||||||||| | |||||||  ||||||||||||||||||| || |||        ||||||||||||||||||||| ||| ||| ||||    
T  28844439 atttaggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaa 28844538  T
Q  271 a 271  Q
    |    
T  28844539 a 28844539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 271
Target Start/End: Original strand, 33135512 - 33135607
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||| |||||||||| | ||||||| |||||||||||||||||||| || |||        || |||||||||||||||||| ||| |||||||||    
T  33135512 ggggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaatttaaa 33135607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 41725968 - 41725924
Alignment:
Q  5 tttgatttttgtgaattgacaaatacattcatgaaattgtaaaat 49  Q
    |||||||||||||||||||||| || |||  ||||||||||||||    
T  41725968 tttgatttttgtgaattgacaagtatatttgtgaaattgtaaaat 41725924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 39178 - 39120
Alignment:
Q  178 aatttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg 236  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  39178 aattaagggggtgtattggatcatgattctaatggattttaaaagacttttttatcatg 39120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 100098 - 100151
Alignment:
Q  183 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg 236  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  100098 agggggtgtattggatcatgattctaagggattttaaaagacttttttatcatg 100151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 184 - 271
Target Start/End: Complemental strand, 15349 - 15257
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||||| ||   |||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  15349 gggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaa 15257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 184 - 271
Target Start/End: Complemental strand, 15992 - 15900
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||||||| ||   |||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  15992 gggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaa 15900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 188 - 271
Target Start/End: Original strand, 8654 - 8745
Alignment:
Q  188 gtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||        ||||||||||||||||||||| ||| |||||||||    
T  8654 gtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtattgtggtattcaatcaagacttttttcaatttaaa 8745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 186 - 260
Target Start/End: Complemental strand, 38837 - 38755
Alignment:
Q  186 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg--------ttgtggtattcaatcaagactctt 260  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||||||        ||||||||||||||||||||||||    
T  38837 gggtgtattggatcatgattctaagggattttaaaagatatttttatcatgaaaaagtcttgtggtattcaatcaagactctt 38755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 102026 - 102072
Alignment:
Q  186 gggtgtattggatcatgattctaaaggattttaaaagacttttttat 232  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  102026 gggtgtattagatcatgattctaagggattttaaaagacttttttat 102072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 4083 - 4133
Alignment:
Q  180 tttaggggg-tgtattggatcatgattctaaaggattttaaaagacttttt 229  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||||    
T  4083 tttagggggatgtattggattaggattctataggattttaaaagacttttt 4133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 271
Target Start/End: Complemental strand, 797 - 763
Alignment:
Q  237 ttgtggtattcaatcaagactctttccaatttaaa 271  Q
    ||||||||||||||||||||||||| |||||||||    
T  797 ttgtggtattcaatcaagactctttacaatttaaa 763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 230
Target Start/End: Complemental strand, 81868 - 81822
Alignment:
Q  184 gggggtgtattggatcatgattctaaaggattttaaaagactttttt 230  Q
    |||||||||||||||   |||| ||||||||||||||||||||||||    
T  81868 gggggtgtattggattgagattttaaaggattttaaaagactttttt 81822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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