View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10207_high_15 (Length: 360)
Name: NF10207_high_15
Description: NF10207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10207_high_15 |
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Alignment Details
Target: chr8 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 16 - 348
Target Start/End: Original strand, 10595800 - 10596138
Alignment:
| Q |
16 |
aggttgtccttcattctttggtccttattatccacaat------ataacatggagcttccgagatacgagtatgataaatatatgccaagggaacatcat |
109 |
Q |
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| T |
10595800 |
aggttgtccttcattctttggcccttattatccacaatcacattataacatggagcttccgagatacgagtatgataaatatatgccaagggaacatcat |
10595899 |
T |
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| Q |
110 |
tgttgtggctgttctaatcattcatgcagccaaagggaagacaaatctgtgaaggtggaagagcaaaaacctgatgttggtaagaaagagaatgatgcta |
209 |
Q |
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| T |
10595900 |
tgttgtggctgttctaatcattcatgcagccaaaaggaagacaaatctgtgaaggtggaagagcaaaaacctgatgttggtaagaaagagaatgatgcta |
10595999 |
T |
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| Q |
210 |
tggttccaattcagtttaggaattttccataccctttggcttggattccaccagagtattatggtaacaaacaaccggaaaattttaaggtggatgagca |
309 |
Q |
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| T |
10596000 |
tggttccaattcagtttaggaattttccataccctttggcttggattcaaccagagtattatggtaacaaacaaccggaaagttttaaggtggatgagca |
10596099 |
T |
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| Q |
310 |
ggataaaatgttacatgataaaaggccaaatgctgatgt |
348 |
Q |
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| T |
10596100 |
ggataaattgttacatgataaaaggccaaatgctgatgt |
10596138 |
T |
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