View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10207_high_23 (Length: 323)
Name: NF10207_high_23
Description: NF10207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10207_high_23 |
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Alignment Details
Target: chr1 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 22 - 306
Target Start/End: Complemental strand, 4698117 - 4697835
Alignment:
| Q |
22 |
ctaacaacttgtcatttaggtaggcatttatatagtagcagtgaaattgatggttatgtatgtcttatatttacatgctttcactcacacatacacacgt |
121 |
Q |
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| T |
4698117 |
ctaacaacttgtcatttaggtaggcatttatatagtagcagtgaaattgatggttatgtatgtcttat--ttacatgctttcactcacacatatacacgt |
4698020 |
T |
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| Q |
122 |
ttattttaaagaatataaatcttatcagtttttatacattcttctgtatactgaaaataagttttcttctgtttaattactttttctaaattaatgatga |
221 |
Q |
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| T |
4698019 |
ttattttaaagaatataaatcttatcagtttttatacattcttctgtatactgaaaataagttttcttctgtttaattactttttctaaattaacgatga |
4697920 |
T |
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| Q |
222 |
tatcatcaatagtattatattatttgtccagtctgatttaatttaatttgcttataaacaaaacaaccaaataaaacaagtcaca |
306 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4697919 |
tatcatcaatagtattatattatttgtccagtctgatttaatttaatttgcttataaacaaaacaaccaaataaaacaagtcaca |
4697835 |
T |
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