View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10207_high_26 (Length: 262)
Name: NF10207_high_26
Description: NF10207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10207_high_26 |
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Alignment Details
Target: chr7 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 5 - 237
Target Start/End: Original strand, 3175617 - 3175849
Alignment:
| Q |
5 |
ttacaactgtctcgtatacgatttgaattttgtctcttaaatatacaaagtcaaacgtttaggattgaaccgacacctcatagacgaaaatatcactaat |
104 |
Q |
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| T |
3175617 |
ttacaactgtctcgtataagatttgaattttttcgcttaaatatacaaagtcaaacgtttagcattgaaccgacacctcagagacgaaaatatcactaat |
3175716 |
T |
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| Q |
105 |
gagttttnnnnnnntttagtgggggtttgaatgttgttccttaaagctactatgttaagatttttccacttatactttatagacaaaatgtaataaaaac |
204 |
Q |
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||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3175717 |
gagttttaaaaaaatttagtggggatttgaatgctgttccttaaagctactatgttaagatttttccacttatactttatagacaaaatgtaataaaaac |
3175816 |
T |
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| Q |
205 |
attgtatttttgaaccccagatcattcatatat |
237 |
Q |
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||||||||||||||| || | |||||||||||| |
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| T |
3175817 |
attgtatttttgaactccggttcattcatatat |
3175849 |
T |
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