View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10207_low_1 (Length: 653)

Name: NF10207_low_1
Description: NF10207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10207_low_1
NF10207_low_1
[»] chr1 (63 HSPs)
chr1 (14-634)||(6582930-6583546)
chr1 (202-295)||(31290921-31291014)
chr1 (203-291)||(16147648-16147736)
chr1 (320-400)||(9313309-9313389)
chr1 (201-295)||(34774957-34775053)
chr1 (202-293)||(27102279-27102369)
chr1 (322-398)||(7857636-7857712)
chr1 (320-396)||(17033571-17033647)
chr1 (321-403)||(31585781-31585863)
chr1 (329-402)||(34774850-34774922)
chr1 (329-397)||(46814496-46814564)
chr1 (417-468)||(24658818-24658869)
chr1 (205-295)||(9313212-9313302)
chr1 (321-403)||(32864582-32864664)
chr1 (201-291)||(32882463-32882553)
chr1 (55-145)||(34775143-34775233)
chr1 (55-145)||(46768447-46768537)
chr1 (320-397)||(24658913-24658990)
chr1 (321-398)||(41920435-41920512)
chr1 (432-607)||(10785489-10785656)
chr1 (421-495)||(32864708-32864783)
chr1 (320-387)||(38544758-38544825)
chr1 (204-274)||(16577368-16577438)
chr1 (321-382)||(5459160-5459221)
chr1 (321-398)||(24449951-24450028)
chr1 (336-397)||(27031876-27031937)
chr1 (316-396)||(27102176-27102256)
chr1 (205-287)||(10785364-10785447)
chr1 (321-403)||(19598614-19598696)
chr1 (417-483)||(20113664-20113730)
chr1 (417-483)||(30686047-30686113)
chr1 (320-402)||(40933842-40933924)
chr1 (417-483)||(41920325-41920391)
chr1 (321-398)||(24684499-24684576)
chr1 (321-398)||(30685925-30686002)
chr1 (56-145)||(32882638-32882727)
chr1 (417-466)||(38544879-38544928)
chr1 (418-479)||(52278375-52278436)
chr1 (337-373)||(27905420-27905456)
chr1 (417-456)||(9313431-9313470)
chr1 (55-154)||(10785181-10785280)
chr1 (417-480)||(24450073-24450136)
chr1 (521-560)||(30686147-30686186)
chr1 (329-396)||(42374148-42374215)
chr1 (201-248)||(52278437-52278484)
chr1 (321-359)||(5389442-5389480)
chr1 (417-483)||(5389564-5389630)
chr1 (552-634)||(7857376-7857458)
chr1 (417-483)||(7857527-7857593)
chr1 (417-495)||(16147416-16147494)
chr1 (417-467)||(31585903-31585953)
chr1 (55-145)||(32863266-32863356)
chr1 (417-467)||(42374052-42374102)
chr1 (320-366)||(46692839-46692885)
chr1 (329-402)||(4651759-4651832)
chr1 (337-366)||(18787241-18787270)
chr1 (418-467)||(19598532-19598581)
chr1 (321-370)||(22239688-22239737)
chr1 (563-600)||(27102059-27102096)
chr1 (424-461)||(34774767-34774804)
chr1 (517-601)||(46814705-46814790)
chr1 (241-290)||(50589148-50589197)
chr1 (419-467)||(50589349-50589397)
[»] chr4 (51 HSPs)
chr4 (55-403)||(39420756-39421116)
chr4 (201-401)||(53823321-53823522)
chr4 (417-600)||(22811301-22811482)
chr4 (202-292)||(48098422-48098512)
chr4 (202-295)||(41117869-41117962)
chr4 (202-295)||(49528158-49528251)
chr4 (320-402)||(19815244-19815326)
chr4 (202-295)||(38637135-38637228)
chr4 (320-402)||(22811180-22811262)
chr4 (239-401)||(2061677-2061839)
chr4 (320-401)||(25753152-25753233)
chr4 (335-398)||(31050697-31050760)
chr4 (417-480)||(31050803-31050866)
chr4 (320-403)||(46698805-46698888)
chr4 (417-467)||(53823563-53823613)
chr4 (417-466)||(19672991-19673040)
chr4 (417-588)||(25752942-25753111)
chr4 (321-394)||(35800476-35800549)
chr4 (323-387)||(21387227-21387291)
chr4 (417-468)||(19815366-19815417)
chr4 (320-402)||(19673080-19673161)
chr4 (321-398)||(8255010-8255087)
chr4 (321-398)||(8268428-8268505)
chr4 (201-290)||(19815121-19815210)
chr4 (418-466)||(46698928-46698976)
chr4 (420-483)||(8254899-8254962)
chr4 (420-483)||(8268317-8268380)
chr4 (320-383)||(16501729-16501792)
chr4 (320-359)||(38637252-38637291)
chr4 (421-495)||(38639554-38639629)
chr4 (418-467)||(12296064-12296113)
chr4 (202-295)||(16832923-16833016)
chr4 (418-467)||(21988062-21988111)
chr4 (335-403)||(2825761-2825829)
chr4 (417-489)||(30964307-30964379)
chr4 (316-384)||(49747524-49747592)
chr4 (316-402)||(19311359-19311443)
chr4 (202-292)||(25753261-25753351)
chr4 (336-370)||(26474847-26474881)
chr4 (320-402)||(38929806-38929888)
chr4 (329-403)||(48098311-48098385)
chr4 (55-137)||(49747807-49747889)
chr4 (321-382)||(4305724-4305785)
chr4 (418-467)||(28966763-28966812)
chr4 (55-152)||(38636953-38637050)
chr4 (241-290)||(38929918-38929967)
chr4 (321-366)||(40813802-40813847)
chr4 (55-152)||(41117688-41117784)
chr4 (157-201)||(25753376-25753420)
chr4 (437-489)||(38929701-38929753)
chr4 (335-371)||(53756766-53756802)
[»] chr3 (53 HSPs)
chr3 (417-634)||(25647407-25647623)
chr3 (417-607)||(4464077-4464265)
chr3 (202-401)||(14879415-14879615)
chr3 (320-400)||(14193921-14194001)
chr3 (316-398)||(37123365-37123447)
chr3 (417-634)||(37123115-37123321)
chr3 (421-607)||(14193690-14193874)
chr3 (335-398)||(23328385-23328448)
chr3 (204-295)||(25647772-25647863)
chr3 (202-295)||(33143850-33143943)
chr3 (320-395)||(40023592-40023667)
chr3 (202-292)||(14755166-14755256)
chr3 (417-487)||(14755405-14755475)
chr3 (321-395)||(19176488-19176562)
chr3 (321-382)||(43012374-43012435)
chr3 (316-371)||(33143965-33144020)
chr3 (321-395)||(9584074-9584148)
chr3 (213-295)||(28937627-28937709)
chr3 (201-290)||(39021177-39021267)
chr3 (336-398)||(45398779-45398841)
chr3 (320-402)||(47945685-47945767)
chr3 (321-398)||(2392527-2392604)
chr3 (321-398)||(2394274-2394351)
chr3 (335-400)||(25647665-25647730)
chr3 (417-489)||(19176369-19176441)
chr3 (201-289)||(23328249-23328337)
chr3 (323-398)||(34475777-34475852)
chr3 (417-483)||(2392649-2392715)
chr3 (417-483)||(2394396-2394462)
chr3 (320-374)||(14755285-14755339)
chr3 (316-366)||(39021292-39021342)
chr3 (321-366)||(17550972-17551017)
chr3 (321-398)||(20611766-20611843)
chr3 (320-396)||(5556555-5556631)
chr3 (521-613)||(47235462-47235554)
chr3 (55-139)||(48893073-48893156)
chr3 (320-387)||(1652906-1652973)
chr3 (335-402)||(30935425-30935492)
chr3 (417-468)||(40023713-40023764)
chr3 (199-289)||(43012469-43012560)
chr3 (417-467)||(823577-823627)
chr3 (421-467)||(5556459-5556505)
chr3 (80-138)||(14194209-14194267)
chr3 (55-145)||(50518809-50518898)
chr3 (417-465)||(23328491-23328537)
chr3 (202-295)||(37123468-37123559)
chr3 (417-482)||(47235589-47235654)
chr3 (335-371)||(20710743-20710779)
chr3 (201-289)||(21342629-21342717)
chr3 (83-139)||(25594296-25594352)
chr3 (417-481)||(34475897-34475961)
chr3 (202-266)||(37999061-37999125)
chr3 (201-289)||(40023471-40023559)
[»] chr7 (55 HSPs)
chr7 (417-600)||(8744912-8745092)
chr7 (202-403)||(8745131-8745332)
chr7 (202-397)||(24324699-24324895)
chr7 (417-598)||(16954414-16954592)
chr7 (418-606)||(42533395-42533581)
chr7 (320-402)||(3478331-3478413)
chr7 (320-402)||(42533272-42533354)
chr7 (321-401)||(16954633-16954713)
chr7 (420-607)||(1320548-1320730)
chr7 (201-400)||(6716637-6716836)
chr7 (320-402)||(1320773-1320855)
chr7 (320-398)||(6584892-6584970)
chr7 (417-495)||(6716878-6716956)
chr7 (205-295)||(42533158-42533248)
chr7 (321-402)||(16828957-16829038)
chr7 (344-401)||(44755606-44755663)
chr7 (320-387)||(12480880-12480947)
chr7 (320-402)||(34389941-34390023)
chr7 (323-403)||(25160793-25160873)
chr7 (57-139)||(6492852-6492934)
chr7 (419-493)||(44755490-44755564)
chr7 (324-373)||(9349757-9349806)
chr7 (321-398)||(10244165-10244242)
chr7 (320-397)||(13311823-13311900)
chr7 (321-398)||(38306244-38306321)
chr7 (329-402)||(38485535-38485608)
chr7 (329-382)||(41089777-41089830)
chr7 (57-145)||(24324520-24324607)
chr7 (207-290)||(23983298-23983381)
chr7 (417-480)||(35745968-35746031)
chr7 (325-403)||(23983174-23983251)
chr7 (417-483)||(37794872-37794938)
chr7 (417-483)||(38306133-38306199)
chr7 (241-295)||(44755675-44755729)
chr7 (329-382)||(3419685-3419738)
chr7 (321-398)||(5860309-5860386)
chr7 (321-382)||(33435108-33435169)
chr7 (522-634)||(37794726-37794838)
chr7 (329-398)||(47325914-47325983)
chr7 (417-465)||(3478243-3478291)
chr7 (521-613)||(33434856-33434948)
chr7 (423-483)||(33434982-33435042)
chr7 (335-366)||(27993571-27993602)
chr7 (417-483)||(3419799-3419865)
chr7 (425-495)||(12480749-12480818)
chr7 (336-366)||(25153235-25153265)
chr7 (320-398)||(35745847-35745925)
chr7 (417-483)||(47326028-47326094)
chr7 (201-290)||(3478443-3478532)
chr7 (321-382)||(3867115-3867176)
chr7 (421-466)||(11379273-11379318)
chr7 (321-398)||(37794972-37795049)
chr7 (324-393)||(46133302-46133371)
chr7 (421-469)||(3867002-3867050)
chr7 (320-396)||(11379147-11379223)
[»] chr2 (54 HSPs)
chr2 (417-607)||(37770783-37770971)
chr2 (202-403)||(37770544-37770744)
chr2 (201-290)||(10173478-10173567)
chr2 (201-401)||(1269463-1269664)
chr2 (202-294)||(34230288-34230380)
chr2 (315-403)||(14106539-14106627)
chr2 (418-633)||(1269208-1269420)
chr2 (421-607)||(41086932-41087115)
chr2 (419-485)||(22885276-22885342)
chr2 (201-290)||(16952283-16952372)
chr2 (201-290)||(17022948-17023037)
chr2 (201-290)||(17060254-17060343)
chr2 (202-293)||(7696050-7696141)
chr2 (220-295)||(41086717-41086792)
chr2 (417-483)||(14106666-14106732)
chr2 (321-398)||(387156-387233)
chr2 (335-399)||(9560823-9560887)
chr2 (201-289)||(14106421-14106509)
chr2 (320-384)||(14405195-14405259)
chr2 (55-145)||(41113460-41113547)
chr2 (329-395)||(7874277-7874343)
chr2 (511-608)||(7695819-7695916)
chr2 (320-381)||(22885153-22885214)
chr2 (419-464)||(29487024-29487069)
chr2 (321-398)||(39338886-39338963)
chr2 (322-402)||(23650364-23650444)
chr2 (424-467)||(4471813-4471856)
chr2 (417-468)||(7874180-7874231)
chr2 (417-546)||(10173721-10173848)
chr2 (327-382)||(10524096-10524151)
chr2 (321-396)||(13337259-13337334)
chr2 (228-295)||(13337360-13337427)
chr2 (243-290)||(22885076-22885123)
chr2 (243-290)||(33788575-33788622)
chr2 (331-381)||(10173609-10173659)
chr2 (320-378)||(16959985-16960043)
chr2 (315-397)||(25504924-25505006)
chr2 (55-145)||(37770370-37770458)
chr2 (417-483)||(39339008-39339074)
chr2 (418-467)||(2062797-2062846)
chr2 (417-597)||(17105173-17105350)
chr2 (316-384)||(34230198-34230266)
chr2 (336-402)||(17105390-17105457)
chr2 (337-399)||(8520384-8520446)
chr2 (83-137)||(13699051-13699105)
chr2 (320-378)||(15126430-15126488)
chr2 (337-395)||(41086825-41086883)
chr2 (418-467)||(3745249-3745298)
chr2 (321-386)||(4471918-4471983)
chr2 (56-145)||(4975016-4975105)
chr2 (56-145)||(4992924-4993013)
chr2 (418-467)||(15126546-15126595)
chr2 (315-376)||(33788647-33788708)
chr2 (423-467)||(30967270-30967314)
[»] chr6 (26 HSPs)
chr6 (417-607)||(20701945-20702132)
chr6 (419-606)||(3880727-3880912)
chr6 (202-295)||(3880500-3880593)
chr6 (202-295)||(20701705-20701798)
chr6 (340-403)||(3880623-3880686)
chr6 (417-483)||(15132664-15132730)
chr6 (323-402)||(32935362-32935441)
chr6 (417-475)||(16510444-16510502)
chr6 (323-387)||(26534742-26534806)
chr6 (320-402)||(20701823-20701905)
chr6 (329-395)||(34105399-34105465)
chr6 (315-380)||(9224042-9224107)
chr6 (323-394)||(26216042-26216112)
chr6 (425-495)||(9223903-9223972)
chr6 (241-295)||(15120538-15120592)
chr6 (335-384)||(21266110-21266159)
chr6 (335-366)||(7546464-7546495)
chr6 (418-465)||(13098706-13098753)
chr6 (424-467)||(15943908-15943951)
chr6 (338-397)||(16510339-16510398)
chr6 (417-483)||(3117364-3117430)
chr6 (83-145)||(17278249-17278311)
chr6 (321-366)||(3117508-3117553)
chr6 (336-365)||(13423482-13423511)
chr6 (323-402)||(12794093-12794173)
chr6 (335-387)||(20499913-20499965)
[»] chr5 (48 HSPs)
chr5 (320-403)||(7392051-7392134)
chr5 (415-607)||(14302570-14302759)
chr5 (417-601)||(7195380-7195563)
chr5 (202-295)||(8297554-8297647)
chr5 (55-151)||(30097598-30097694)
chr5 (205-403)||(7195145-7195342)
chr5 (320-401)||(13954254-13954334)
chr5 (417-495)||(13954375-13954453)
chr5 (200-295)||(7391936-7392032)
chr5 (319-403)||(14302449-14302533)
chr5 (417-592)||(26046106-26046278)
chr5 (335-397)||(26045999-26046062)
chr5 (417-495)||(7392173-7392251)
chr5 (417-495)||(8297329-8297407)
chr5 (321-398)||(698344-698421)
chr5 (202-295)||(33258784-33258877)
chr5 (320-401)||(33258902-33258983)
chr5 (321-382)||(34378097-34378158)
chr5 (320-396)||(24072286-24072362)
chr5 (320-403)||(8297446-8297529)
chr5 (225-295)||(21402761-21402832)
chr5 (418-489)||(22675456-22675527)
chr5 (320-395)||(39024470-39024545)
chr5 (320-402)||(17854087-17854169)
chr5 (202-295)||(26045866-26045959)
chr5 (80-132)||(14302188-14302240)
chr5 (235-295)||(14302365-14302425)
chr5 (202-270)||(26405447-26405515)
chr5 (320-396)||(39184207-39184283)
chr5 (323-386)||(23426339-23426402)
chr5 (315-397)||(8730901-8730983)
chr5 (320-374)||(22675344-22675398)
chr5 (420-466)||(24072411-24072457)
chr5 (18-132)||(26405226-26405344)
chr5 (316-381)||(29087481-29087546)
chr5 (335-371)||(12046265-12046301)
chr5 (417-469)||(29087367-29087419)
chr5 (80-139)||(8297749-8297808)
chr5 (98-152)||(7195063-7195117)
chr5 (204-290)||(17853971-17854056)
chr5 (417-483)||(18593115-18593181)
chr5 (324-402)||(31721656-31721734)
chr5 (321-382)||(18593242-18593303)
chr5 (322-399)||(25991989-25992066)
chr5 (55-132)||(26045683-26045760)
chr5 (57-145)||(33109922-33110007)
chr5 (80-113)||(37108103-37108136)
chr5 (417-481)||(34377972-34378036)
[»] scaffold0200 (2 HSPs)
scaffold0200 (201-401)||(19363-19564)
scaffold0200 (418-552)||(19189-19320)
[»] scaffold0063 (3 HSPs)
scaffold0063 (202-394)||(58114-58306)
scaffold0063 (417-494)||(57989-58066)
scaffold0063 (575-608)||(57944-57977)
[»] scaffold0119 (2 HSPs)
scaffold0119 (201-401)||(42038-42239)
scaffold0119 (418-633)||(42282-42494)
[»] scaffold0050 (4 HSPs)
scaffold0050 (417-607)||(36457-36646)
scaffold0050 (321-400)||(36688-36767)
scaffold0050 (202-291)||(36799-36888)
scaffold0050 (55-145)||(36978-37068)
[»] chr8 (34 HSPs)
chr8 (202-399)||(17656904-17657101)
chr8 (421-597)||(17657147-17657324)
chr8 (168-262)||(8862469-8862563)
chr8 (320-402)||(10248573-10248655)
chr8 (417-485)||(10248695-10248763)
chr8 (329-403)||(15821408-15821482)
chr8 (321-398)||(24995416-24995493)
chr8 (320-402)||(17720726-17720807)
chr8 (417-483)||(24995538-24995604)
chr8 (320-402)||(30236148-30236230)
chr8 (321-395)||(31207383-31207457)
chr8 (321-402)||(9519478-9519559)
chr8 (320-381)||(15906686-15906747)
chr8 (321-398)||(36630820-36630897)
chr8 (65-152)||(8862352-8862439)
chr8 (78-145)||(10248309-10248376)
chr8 (417-484)||(31210333-31210400)
chr8 (336-403)||(35062435-35062502)
chr8 (220-274)||(12197988-12198042)
chr8 (220-274)||(12442416-12442470)
chr8 (321-403)||(16457482-16457563)
chr8 (321-387)||(32945724-32945790)
chr8 (329-398)||(32066324-32066393)
chr8 (337-398)||(34389042-34389103)
chr8 (417-483)||(9519371-9519437)
chr8 (241-295)||(10248494-10248548)
chr8 (324-386)||(10552263-10552325)
chr8 (417-483)||(34389148-34389214)
chr8 (417-483)||(36630709-36630775)
chr8 (241-290)||(17720647-17720696)
chr8 (321-398)||(37986879-37986956)
chr8 (418-483)||(37987002-37987067)
chr8 (517-633)||(10248791-10248907)
chr8 (55-139)||(17656456-17656539)
[»] scaffold1613 (2 HSPs)
scaffold1613 (320-387)||(1037-1104)
scaffold1613 (417-466)||(1158-1207)
[»] scaffold1384 (1 HSPs)
scaffold1384 (56-152)||(1372-1472)
[»] scaffold0062 (1 HSPs)
scaffold0062 (336-402)||(47072-47138)
[»] scaffold0068 (2 HSPs)
scaffold0068 (329-398)||(35800-35869)
scaffold0068 (521-601)||(36015-36095)


Alignment Details
Target: chr1 (Bit Score: 459; Significance: 0; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 459; E-Value: 0
Query Start/End: Original strand, 14 - 634
Target Start/End: Original strand, 6582930 - 6583546
Alignment:
Q  14 gagacggtgaaactaggaatataaacaaaaggctataaagtggaacacccgaaaataaatactataaaaaacacccatgatgataacacccaccaaaata 113  Q
    ||||| |||||||||||||||||||||||||||||||  | |||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||    
T  6582930 gagacagtgaaactaggaatataaacaaaaggctatacggcggaacacccgaaaataaacaccataaaaaacactcatgatgataacacccaccaaaata 6583029  T
Q  114 tacgttaccacctaaaacatactcctacacgagaacaacatacccaacctcactcgtcgtcattactcacccccaaagaaaaacacccaacaccaaagct 213  Q
     |||| ||||||||||||| ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6583030 cacgtcaccacctaaaacagactcctacacgagaacaacatacccaacaccactcgttgtcattactcacccccaaagaaaaacacccaacaccaaagct 6583129  T
Q  214 gagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccatnnnnnnnnnnnnnnnnnn 313  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||                      
T  6583130 gagccgcatccgaaaagctcctatctgaaagatcaatcagcttccaccacctctcgacctccgattcaccgaaagaaaccataaaaagcaaaaaaccaaa 6583229  T
Q  314 nctgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcacccttgacaaatca 413  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6583230 actgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccagactttaggaccaaatcagaaaggcacccctcacccttgacaaatca 6583329  T
Q  414 cgcttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgacaacgacgtgatatatatgcg 513  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||    
T  6583330 cgcttgcagctagacaccgactcccgatctcgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgacaacgacgtg----atatgcg 6583425  T
Q  514 gtcgtgcaaacaacaaactgatcaaaaggaaaaagctcaacacaacgagacccacttccttcaaacaccctaaacaccttaacaaccctaaaaaccacaa 613  Q
    || ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6583426 gtggtgcaaacaacaaactgatcaaaagaaaaaaactcaacacaacgagacccacttccttcaaacaccctaaacaccttaacaaccctaataaccacaa 6583525  T
Q  614 caagagttactgactacgaac 634  Q
    ||||||||| |||||||||||    
T  6583526 caagagttagtgactacgaac 6583546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 31290921 - 31291014
Alignment:
Q  202 aacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccat 295  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||    
T  31290921 aacaccaaagctgagccacatccgaaaagctcctatccgaaagatcaagcaacttccaccacctctcgacctccgatccaccgaaagaaaccat 31291014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 203 - 291
Target Start/End: Complemental strand, 16147736 - 16147648
Alignment:
Q  203 acaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaa 291  Q
    |||||||||||||||| |||||||||||||| |||||||||||||| ||||||| ||||||||||| ||||| |||  |||||||||||    
T  16147736 acaccaaagctgagccacatccgaaaagctcatatctgaaagatcattcaactttcaccacctctccacctccgatctaccgaaagaaa 16147648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 320 - 400
Target Start/End: Original strand, 9313309 - 9313389
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcac 400  Q
    |||||||| ||||| ||||||||||||||||||||||| | |||| | |||||||||||||||||||| ||||||||||||    
T  9313309 ccaaagaactgactcccgatctcgaatcaaaagtgatcagcccactagactttaggaccaaatcagaagggcacccctcac 9313389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 201 - 295
Target Start/End: Complemental strand, 34775053 - 34774957
Alignment:
Q  201 caacaccaaagctgagccgcatccg-aaaagctcctatctgaaaga-tcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccat 295  Q
    |||||||||||||||||| |||||| |||| ||||||||||||| | ||||||| ||||||||||||||| |||||  |||||||||||||||||||    
T  34775053 caacaccaaagctgagccacatccggaaaaactcctatctgaaacaatcaatcagcttccaccacctctcaacctccaattcaccgaaagaaaccat 34774957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 27102369 - 27102279
Alignment:
Q  202 aacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaacc 293  Q
    ||||| ||||||||||| || | |||| ||||||||||||||||||| ||| ||||||||||||||||||||| ||| ||||||||||||||    
T  27102369 aacactaaagctgagccacaac-gaaacgctcctatctgaaagatcattcagcttccaccacctctcgacctccgatccaccgaaagaaacc 27102279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 322 - 398
Target Start/End: Complemental strand, 7857712 - 7857636
Alignment:
Q  322 aaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    ||||| |||||| ||||||||||||||||||||||||| |||||| ||||||| |||||||||| | ||||||||||    
T  7857712 aaagagttgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcacccctc 7857636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 320 - 396
Target Start/End: Complemental strand, 17033647 - 17033571
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccc 396  Q
    |||||||| ||||| |||||||||| |||||||||||||| |||||| ||| |||||||||||||||| ||||||||    
T  17033647 ccaaagaactgactcccgatctcgattcaaaagtgatcggcccaccagactataggaccaaatcagaagggcacccc 17033571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 321 - 403
Target Start/End: Original strand, 31585781 - 31585863
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccct 403  Q
    ||||||| ||||| ||||||||||||||||||||||||| |||||| ||| ||| ||||||| || | |||||||||||||||    
T  31585781 caaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccctcaccct 31585863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 329 - 402
Target Start/End: Complemental strand, 34774922 - 34774850
Alignment:
Q  329 tgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccc 402  Q
    ||||| |||||||||| ||||||||||||||||||||| || ||||||||||||||||| |||||| |||||||    
T  34774922 tgactcccgatctcga-tcaaaagtgatcggtccaccagacgttaggaccaaatcagaagggcaccactcaccc 34774850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 329 - 397
Target Start/End: Original strand, 46814496 - 46814564
Alignment:
Q  329 tgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccct 397  Q
    ||||| ||||||||||||||||||||||||| |||||| ||||||| |||||||||| | |||||||||    
T  46814496 tgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcacccct 46814564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 417 - 468
Target Start/End: Complemental strand, 24658869 - 24658818
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccg 468  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  24658869 ttgcagctagacaccaactcccgatcttgaagcaaaaataaccggcccaccg 24658818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 205 - 295
Target Start/End: Original strand, 9313212 - 9313302
Alignment:
Q  205 accaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccat 295  Q
    |||||||||||||| |||||||||| ||| ||| |||| |||||  ||||| ||||||||| || ||||| ||| ||||||||||||||||    
T  9313212 accaaagctgagccacatccgaaaaactcgtatttgaaggatcatacaactgccaccacctatccacctccgatccaccgaaagaaaccat 9313302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 321 - 403
Target Start/End: Original strand, 32864582 - 32864664
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccct 403  Q
    |||||||  |||| |||||||||||| ||||||||| || ||||||  ||||||||||||||| ||| |||||||||||||||    
T  32864582 caaagaaccgacttccgatctcgaattaaaagtgattggcccaccagcctttaggaccaaatcggaagggcacccctcaccct 32864664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 32882553 - 32882463
Alignment:
Q  201 caacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaa 291  Q
    |||||||||||||||||| ||| ||||||||||||  | ||||||||| | | ||| |||||||| |||| ||| ||||||||||||||||    
T  32882553 caacaccaaagctgagccacattcgaaaagctcctgaccgaaagatcattaagctttcaccacctgtcgatctccgattcaccgaaagaaa 32882463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 55 - 145
Target Start/End: Complemental strand, 34775233 - 34775143
Alignment:
Q  55 ggaacacccgaaaataaatactataaaaaacacccatgatgataacacccaccaaaatatacgttaccacctaaaacatactcctacacga 145  Q
    |||||||||||||||||| ||  ||||||| ||| |||| || |||||||||||||||| |||| | ||||||||||| |||||| |||||    
T  34775233 ggaacacccgaaaataaacaccttaaaaaataccaatgaggacaacacccaccaaaatacacgtcatcacctaaaacagactccttcacga 34775143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 55 - 145
Target Start/End: Complemental strand, 46768537 - 46768447
Alignment:
Q  55 ggaacacccgaaaataaatactataaaaaacacccatgatgataacacccaccaaaatatacgttaccacctaaaacatactcctacacga 145  Q
    |||||||||||||||||| ||  ||||||||||||  || || |||||||||||||||  |||| ||||||||||||| |||||| |||||    
T  46768537 ggaacacccgaaaataaacaccctaaaaaacacccccgaggacaacacccaccaaaattcacgtcaccacctaaaacagactccttcacga 46768447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 320 - 397
Target Start/End: Complemental strand, 24658990 - 24658913
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccct 397  Q
    |||||||  ||||| |||||||||||||||||||||| || |||||| ||||||| |||||||||| | |||||||||    
T  24658990 ccaaagagctgactcccgatctcgaatcaaaagtgattggcccaccagactttagaaccaaatcagcagggcacccct 24658913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 321 - 398
Target Start/End: Complemental strand, 41920512 - 41920435
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    ||||||| ||||| ||||||||||||||||||||||||| |||||| ||| ||| ||||||| || | ||||||||||    
T  41920512 caaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactgtagtaccaaattagcagggcacccctc 41920435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 432 - 607
Target Start/End: Original strand, 10785489 - 10785656
Alignment:
Q  432 gactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgacaacgacgtgatatatatgcggtcgtgcaaacaacaaac 531  Q
    |||||||||||| ||||||||| ||||||||||||||  ||||| |||||||| |||| |||||  ||   | | ||| ||||  |||||||||||        
T  10785489 gactcccgatctcgaagcaaaattaaccggcccaccggaaaccagcacacaaacagtaagacaa--accaca-agataggcgggggtgcaaacaac---- 10785581  T
Q  532 tgatcaaaaggaaaaagctcaacacaacgagacccacttccttcaaacaccctaaacaccttaacaaccctaaaaa 607  Q
     |||||||||||||| ||||| | ||| | ||||  || ||| ||||||||||||||||||||||||||| |||||    
T  10785582 -gatcaaaaggaaaaggctcagctcaatgggacctgctccctccaaacaccctaaacaccttaacaaccccaaaaa 10785656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 32864708 - 32864783
Alignment:
Q  421 agctagacaccgactcccgatcttgaagcaaaagtaaccggcccacc-gacaaccaacacacaaaaagtatgacaa 495  Q
    ||||||||||||||||| ||| | ||||||||||||||||||||||| || ||| | ||||||||| |||||||||    
T  32864708 agctagacaccgactcctgatttcgaagcaaaagtaaccggcccaccggaaaactagcacacaaaacgtatgacaa 32864783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 320 - 387
Target Start/End: Original strand, 38544758 - 38544825
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaa 387  Q
    |||||||| ||||| |||||||||||||||||| |||||| |||||| |||| | |||||||||||||    
T  38544758 ccaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagacttcatgaccaaatcagaa 38544825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 204 - 274
Target Start/End: Complemental strand, 16577438 - 16577368
Alignment:
Q  204 caccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctc 274  Q
    |||||||| |||||| ||||||||||||||||||   |||||||| ||| ||||||||||||||| |||||    
T  16577438 caccaaagttgagccacatccgaaaagctcctattccaaagatcattcagcttccaccacctctcaacctc 16577368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 321 - 382
Target Start/End: Complemental strand, 5459221 - 5459160
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaat 382  Q
    |||| |||||||| ||||||||||||||||||||||||| |||||| ||| ||| |||||||    
T  5459221 caaataattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaat 5459160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 321 - 398
Target Start/End: Original strand, 24449951 - 24450028
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    ||||||| ||||| |||||||| |||||||||||||||| |||||||||| ||| ||||||  || | ||||||||||    
T  24449951 caaagaactgacttccgatctcaaatcaaaagtgatcggcccaccaaactatagtaccaaaatagcagggcacccctc 24450028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 336 - 397
Target Start/End: Original strand, 27031876 - 27031937
Alignment:
Q  336 cgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccct 397  Q
    |||||||||||||||||||||||| |||| | ||||||| |||||||||| | |||||||||    
T  27031876 cgatctcgaatcaaaagtgatcggcccactagactttagaaccaaatcagcagggcacccct 27031937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 316 - 396
Target Start/End: Complemental strand, 27102256 - 27102176
Alignment:
Q  316 tgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccc 396  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| ||   | |||||  ||||||| ||||| ||||||||    
T  27102256 tgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccgttagactttgagaccaaaacagaagggcacccc 27102176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 10785364 - 10785447
Alignment:
Q  205 accaaagctgagccgcatccgaaaagctcctatctga-aagatcaatcaacttccaccacctctcgacctctgattcaccgaaa 287  Q
    |||||||| |||||||| |||||||||||||||| || || |||| ||| ||||||||||||| ||||||| ||  ||||||||    
T  10785364 accaaagcagagccgcacccgaaaagctcctatcagagaaaatcattcagcttccaccacctcgcgacctccgaaccaccgaaa 10785447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 403
Target Start/End: Complemental strand, 19598696 - 19598614
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccct 403  Q
    ||||||| |||||  ||||||||||||||||| |||||| |||||| |||| |||||| || ||||  ||||||||| |||||    
T  19598696 caaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagacttcaggacccaaccagacgggcaccccttaccct 19598614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 483
Target Start/End: Original strand, 20113664 - 20113730
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaa 483  Q
    |||||||||||| |||||||||||||| ||||| |||  |||||||||||||| ||| | |||||||    
T  20113664 ttgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaactagcacacaa 20113730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 483
Target Start/End: Original strand, 30686047 - 30686113
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaa 483  Q
    |||||| |||||  ||||||||||||| ||||| |||  |||||||||||||| |||||||||||||    
T  30686047 ttgcagttagacctcgactcccgatctcgaagccaaatgaaccggcccaccgaaaaccaacacacaa 30686113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 402
Target Start/End: Complemental strand, 40933924 - 40933842
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccc 402  Q
    ||||| || ||||| |||||||| ||||||||| ||||||| ||||||||||| | |||||| ||| | | ||||||||||||    
T  40933924 ccaaataactgacttccgatctcaaatcaaaagcgatcggttcaccaaactttcgaaccaaaacaggaggacacccctcaccc 40933842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 483
Target Start/End: Complemental strand, 41920391 - 41920325
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaa 483  Q
    |||||||||||| |||||||||||||| ||||| |||  |||||||||||||| ||| | |||||||    
T  41920391 ttgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaactagcacacaa 41920325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 321 - 398
Target Start/End: Original strand, 24684499 - 24684576
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    ||||||| ||||  |||||||||||| |||||||||||| |||||| ||||||| | ||||| || | ||||||||||    
T  24684499 caaagaactgacatccgatctcgaattaaaagtgatcggcccaccagactttagaatcaaattagtagggcacccctc 24684576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 321 - 398
Target Start/End: Original strand, 30685925 - 30686002
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    ||||||| ||||| |||||||| |||||||||||||||| |||| | ||| ||| ||||||| || | ||||||||||    
T  30685925 caaagaactgactcccgatctcaaatcaaaagtgatcggcccacaagactatagtaccaaattagcagggcacccctc 30686002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 145
Target Start/End: Complemental strand, 32882727 - 32882638
Alignment:
Q  56 gaacacccgaaaataaatactataaaaaacacccatgatgataacacccaccaaaatatacgttaccacctaaaacatactcctacacga 145  Q
    ||||||||||||||||| ||  ||||| ||||||  || || ||||||||||||||||||| | ||| ||||||||  |||||| |||||    
T  32882727 gaacacccgaaaataaacaccctaaaagacacccccgaggacaacacccaccaaaatatacatcaccgcctaaaactgactccttcacga 32882638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 417 - 466
Target Start/End: Original strand, 38544879 - 38544928
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccac 466  Q
    ||||||||||||||| |||||| |||| ||||||||||||| ||||||||    
T  38544879 ttgcagctagacaccaactcccaatctcgaagcaaaagtaatcggcccac 38544928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 418 - 479
Target Start/End: Complemental strand, 52278436 - 52278375
Alignment:
Q  418 tgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacac 479  Q
    ||||||||||||||| |||| | ||| ||||||||||||| ||| ||||||| |||||||||    
T  52278436 tgcagctagacaccggctcctggtctcgaagcaaaagtaatcggtccaccgaaaaccaacac 52278375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 27905456 - 27905420
Alignment:
Q  337 gatctcgaatcaaaagtgatcggtccaccaaacttta 373  Q
    |||||||||||||||||||||||||||||| ||||||    
T  27905456 gatctcgaatcaaaagtgatcggtccaccagacttta 27905420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 456
Target Start/End: Original strand, 9313431 - 9313470
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagta 456  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  9313431 ttgcagctagacaccaactcccgatctcgaagcaaaagta 9313470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 10785181 - 10785280
Alignment:
Q  55 ggaacacccgaaaataaatactataaaaaacacccatgatgataacacccaccaaaatatacgttaccacctaaaacatactcctacacgagaacaacat 154  Q
    ||||||||| || ||||| ||  |||||||||||| ||| || |||||||| ||||||| | |||| ||| ||||||| |||||| ||||| ||| ||||    
T  10785181 ggaacacccaaatataaacaccttaaaaaacacccttgaggacaacacccatcaaaatacatgttatcacttaaaacagactccttcacgaaaacgacat 10785280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 480
Target Start/End: Original strand, 24450073 - 24450136
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacaca 480  Q
    |||||||||||| |||||||||||||| ||||| |||  || ||||||| ||| ||||||||||    
T  24450073 ttgcagctagaccccgactcccgatctcgaagccaaatgaatcggcccatcgaaaaccaacaca 24450136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 521 - 560
Target Start/End: Original strand, 30686147 - 30686186
Alignment:
Q  521 aaacaacaaactgatcaaaaggaaaaagctcaacacaacg 560  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  30686147 aaacaacaaacagatcaaaaggaaaaggctcaacacaacg 30686186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 42374215 - 42374148
Alignment:
Q  329 tgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccc 396  Q
    ||||| |||||||| ||||||||| ||||||||||||| ||   | ||||||||||||| ||||||||    
T  42374215 tgactcccgatctcaaatcaaaagcgatcggtccaccagacaacatgaccaaatcagaagggcacccc 42374148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 248
Target Start/End: Complemental strand, 52278484 - 52278437
Alignment:
Q  201 caacaccaaagctgagccgcatccgaaaagctcctatctgaaagatca 248  Q
    ||||| ||||| |||||| |||||||||| ||||||||||||||||||    
T  52278484 caacatcaaagttgagccacatccgaaaaactcctatctgaaagatca 52278437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 5389442 - 5389480
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcgg 359  Q
    ||||||| ||||| |||||||||||||||||||||||||    
T  5389442 caaagaactgactcccgatctcgaatcaaaagtgatcgg 5389480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 483
Target Start/End: Original strand, 5389564 - 5389630
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaa 483  Q
    |||||||||||| | |||||||||||| ||||| |||  ||||||||||| || ||||| |||||||    
T  5389564 ttgcagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccagcacacaa 5389630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 552 - 634
Target Start/End: Complemental strand, 7857458 - 7857376
Alignment:
Q  552 aacacaacgagacccacttccttcaaacaccctaaacaccttaacaaccctaaaaaccacaacaagagttactgactacgaac 634  Q
    ||||||||| ||| |||| ||| ||||||||||||||||||| ||||||| ||| ||   |||||||| || |||| ||||||    
T  7857458 aacacaacgggacacactccctccaaacaccctaaacaccttgacaaccccaaagacgcaaacaagagctagtgacgacgaac 7857376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 483
Target Start/End: Complemental strand, 7857593 - 7857527
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaa 483  Q
    ||||| ||||||||| ||||||||||| ||||||||| ||| |||||||| |  ||||| |||||||    
T  7857593 ttgcaactagacaccaactcccgatctcgaagcaaaaataatcggcccactggaaaccagcacacaa 7857527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 495
Target Start/End: Complemental strand, 16147494 - 16147416
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgacaa 495  Q
    |||||||||||||  |||||||||||| |||  |||||||| ||||||||||  | | ||||||||| ||||| |||||    
T  16147494 ttgcagctagacagtgactcccgatctcgaactaaaagtaatcggcccaccggaacctaacacacaataagtaagacaa 16147416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 467
Target Start/End: Original strand, 31585903 - 31585953
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccacc 467  Q
    |||||||||||| |||||||||||||| ||||| |||  ||||||||||||    
T  31585903 ttgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccacc 31585953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 55 - 145
Target Start/End: Original strand, 32863266 - 32863356
Alignment:
Q  55 ggaacacccgaaaataaatactataaaaaacacccatgatgataacacccaccaaaatatacgttaccacctaaaacatactcctacacga 145  Q
    |||||||| ||||||||| || |  ||||||||||| || || |||||||||||| ||| |||| ||| ||||||||| | |||| |||||    
T  32863266 ggaacacctgaaaataaacaccaagaaaaacacccaagaggacaacacccaccaacatacacgtcaccgcctaaaacagaatcctccacga 32863356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 467
Target Start/End: Complemental strand, 42374102 - 42374052
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccacc 467  Q
    ||||| |||||||| |||||||||||| ||| ||||||||||||| |||||    
T  42374102 ttgcaactagacactgactcccgatctcgaatcaaaagtaaccggtccacc 42374052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 320 - 366
Target Start/End: Original strand, 46692839 - 46692885
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccacca 366  Q
    |||||||| | ||| ||||||||||||||||||||||||| ||||||    
T  46692839 ccaaagaactaactcccgatctcgaatcaaaagtgatcggcccacca 46692885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 402
Target Start/End: Complemental strand, 4651832 - 4651759
Alignment:
Q  329 tgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccc 402  Q
    ||||| ||||||||||||||||||||||||| || ||| ||||  | || || |||||| ||||||||| ||||    
T  4651832 tgactcccgatctcgaatcaaaagtgatcggccccccagacttcggaacaaattcagaagggcaccccttaccc 4651759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 366
Target Start/End: Original strand, 18787241 - 18787270
Alignment:
Q  337 gatctcgaatcaaaagtgatcggtccacca 366  Q
    ||||||||||||||||||||||||||||||    
T  18787241 gatctcgaatcaaaagtgatcggtccacca 18787270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 467
Target Start/End: Complemental strand, 19598581 - 19598532
Alignment:
Q  418 tgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccacc 467  Q
    ||||||||||| || ||| | ||||| |||||||||||||||||||||||    
T  19598581 tgcagctagacgccaacttctgatctcgaagcaaaagtaaccggcccacc 19598532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 370
Target Start/End: Complemental strand, 22239737 - 22239688
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaact 370  Q
    ||||| |||||||  |||||| ||||||||||||||||||||| ||||||    
T  22239737 caaagcattgactctcgatcttgaatcaaaagtgatcggtccatcaaact 22239688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 563 - 600
Target Start/End: Complemental strand, 27102096 - 27102059
Alignment:
Q  563 acccacttccttcaaacaccctaaacaccttaacaacc 600  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  27102096 acccgcttcctccaaacaccctaaacaccttaacaacc 27102059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 461
Target Start/End: Complemental strand, 34774804 - 34774767
Alignment:
Q  424 tagacaccgactcccgatcttgaagcaaaagtaaccgg 461  Q
    |||||||||||||||| ||| |||||||||||||||||    
T  34774804 tagacaccgactcccgttctcgaagcaaaagtaaccgg 34774767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 517 - 601
Target Start/End: Original strand, 46814705 - 46814790
Alignment:
Q  517 gtgcaaacaacaaactgatcaaaaggaaaaagctcaac-acaacgagacccacttccttcaaacaccctaaacaccttaacaaccc 601  Q
    |||||||||||||| |  ||| |||||||| ||||||| |||||| ||| | |  ||| |||||||||||||||||| ||||||||    
T  46814705 gtgcaaacaacaaaatagtcacaaggaaaaggctcaaccacaacgggacacgcaccctccaaacaccctaaacacctaaacaaccc 46814790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 290
Target Start/End: Original strand, 50589148 - 50589197
Alignment:
Q  241 aaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaa 290  Q
    ||||||||||||||||| |||||||| | ||||||| | |||||||||||    
T  50589148 aaagatcaatcaacttctaccacctcacaacctctggtccaccgaaagaa 50589197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 467
Target Start/End: Original strand, 50589349 - 50589397
Alignment:
Q  419 gcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccacc 467  Q
    |||||||||| || | ||||||||| ||||||||| |||||||||||||    
T  50589349 gcagctagacgccaagtcccgatctcgaagcaaaattaaccggcccacc 50589397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 6e-45; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 55 - 403
Target Start/End: Original strand, 39420756 - 39421116
Alignment:
Q  55 ggaacacccgaaaataaatactataaaaaacacccatgatgataacacccaccaaaatatacgttaccacctaaaacatactcctacacgagaacaac-- 152  Q
    ||||||||||||||| || || ||||||||||| |||||  |||||||| ||||||||| |||| |||| |||||||  |||||||||||||||||||      
T  39420756 ggaacacccgaaaatgaacaccataaaaaacactcatgagcataacacc-accaaaatacacgtcaccatctaaaactgactcctacacgagaacaacca 39420854  T
Q  153 -----------atacccaacctcactcgtcgtcattactcacccccaaagaaaaacacccaacaccaaagctgagccgcatccgaaaagctcctatctga 241  Q
               ||| |||||  ||| |||||||| ||||||| |||||||||||| |||||||||| ||||| |||| |||  |||||||||||||||||    
T  39420855 ccgtataaacgatatccaacaccacccgtcgtcactactcacacccaaagaaaaagacccaacaccgaagctaagccacatttgaaaagctcctatctga 39420954  T
Q  242 aagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccatnnnnnnnnnnnnnnnnnnnctgatccaaagaattgactgccgatct 341  Q
    || ||||||||  |||||||||||||||| ||| ||| |||||||| |||||||                   |||||| || ||||||||| |||||||    
T  39420955 aatatcaatcagtttccaccacctctcgatctccgatccaccgaaaaaaaccataaaaagcccaaaaccaaaactgatctaaggaattgactcccgatct 39421054  T
Q  342 cgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccct 403  Q
    |||||||||||||||||| ||||||  || || ||||| ||||||| |||||||||||||||    
T  39421055 cgaatcaaaagtgatcggcccaccaggctataagaccatatcagaagggcacccctcaccct 39421116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 201 - 401
Target Start/End: Original strand, 53823321 - 53823522
Alignment:
Q  201 caacaccaaagctgagccgcatccgaaaagctcctatctgaaa-gatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccatnnnn 299  Q
    |||||||||||||||||| ||||| |||||||||||||  ||| ||||||||||||||||||||||||||||||  |||  |||||||||||||||        
T  53823321 caacaccaaagctgagccacatcctaaaagctcctatccaaaaagatcaatcaacttccaccacctctcgaccttcgatcaaccgaaagaaaccataaaa 53823420  T
Q  300 nnnnnnnnnnnnnnnctgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctca 399  Q
                    ||| |||||||| ||||| |||||||||||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||    
T  53823421 aacccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgattggtccaccagactttatgaccaaatcagaagggcacccctca 53823520  T
Q  400 cc 401  Q
    ||    
T  53823521 cc 53823522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 417 - 600
Target Start/End: Original strand, 22811301 - 22811482
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacac-aaaaagtatgacaacgacgtgatatatatgcggt 515  Q
    ||||| ||||||||| | | ||||||| |||||||||||||||| |||||||| ||||| ||||| |||||| |||||||  ||  || |||||||||||    
T  22811301 ttgcaactagacaccaagttccgatctcgaagcaaaagtaaccgacccaccgaaaaccagcacacaaaaaagaatgacaa--ac--gacatatatgcggt 22811396  T
Q  516 cgtgcaaac-aacaaactgatcaaaaggaaaaagctcaacacaacgagacccacttccttcaaacaccctaaacaccttaacaacc 600  Q
     |||||||| || ||||  ||||||||||||| ||| |   ||||| ||||| |||||| ||||| ||||||||||||||||||||    
T  22811397 agtgcaaacaaaaaaacatatcaaaaggaaaaggcttagatcaacgggacccgcttcctccaaactccctaaacaccttaacaacc 22811482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 202 - 292
Target Start/End: Complemental strand, 48098512 - 48098422
Alignment:
Q  202 aacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaac 292  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||  ||| ||||||||||||||||||||  ||| || ||||||||||    
T  48098512 aacaccaaagttgagccacatccgaaaagctcctatctgaaagatcgttcatcttccaccacctctcgaccttcgatccatcgaaagaaac 48098422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 41117869 - 41117962
Alignment:
Q  202 aacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccat 295  Q
    ||||||||| ||||||| | |||| |||||||||||  ||||||||| ||| ||||||||||||||||||||||||| || |||||||||||||    
T  41117869 aacaccaaacctgagccacctccgcaaagctcctattcgaaagatcattcagcttccaccacctctcgacctctgatccatcgaaagaaaccat 41117962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 202 - 295
Target Start/End: Complemental strand, 49528251 - 49528158
Alignment:
Q  202 aacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccat 295  Q
    |||||||||||||| || |||||| |||||| ||||| ||||||||| ||| ||||||||||||| ||||||| ||| ||||||||||||||||    
T  49528251 aacaccaaagctgaaccacatccgcaaagcttctatccgaaagatcattcatcttccaccacctcccgacctccgatccaccgaaagaaaccat 49528158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 320 - 402
Target Start/End: Original strand, 19815244 - 19815326
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccc 402  Q
    |||||||| ||||| | |||||||||| |||||| |||||||||||| |||||||||||||| ||||| ||||||||||||||    
T  19815244 ccaaagaactgactcctgatctcgaataaaaagtaatcggtccaccagactttaggaccaaaacagaagggcacccctcaccc 19815326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 38637135 - 38637228
Alignment:
Q  202 aacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccat 295  Q
    |||||||||| ||| |||| || | ||||||| |||||||||||||| ||| ||||||||||||||||||||| ||| |||| |||||||||||    
T  38637135 aacaccaaagttgaaccgcctcggcaaagctcttatctgaaagatcattcagcttccaccacctctcgacctccgatccaccaaaagaaaccat 38637228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 320 - 402
Target Start/End: Original strand, 22811180 - 22811262
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccc 402  Q
    |||||||| ||||| |||||||||||| |||| ||||||| |||||| |||||| ||||||||||||| ||||| ||||||||    
T  22811180 ccaaagaactgactcccgatctcgaataaaaaatgatcggcccaccagactttaagaccaaatcagaagggcactcctcaccc 22811262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 239 - 401
Target Start/End: Original strand, 2061677 - 2061839
Alignment:
Q  239 tgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccatnnnnnnnnnnnnnnnnnnnctgatccaaagaattgactgccga 338  Q
    |||||||||| ||||||||||||||||||||||||| ||| |||||||||||| |||                   ||||||||||||| |||||  | |    
T  2061677 tgaaagatcattcaacttccaccacctctcgacctccgatccaccgaaagaaatcatcaaaagcccaaaatcaaaactgatccaaagaactgactctcaa 2061776  T
Q  339 tctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcacc 401  Q
    ||||||||||||||||||| | |||||| ||||||||| |||||||  | |||||||||||||    
T  2061777 tctcgaatcaaaagtgatcagcccaccagactttaggatcaaatcaagagggcacccctcacc 2061839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 320 - 401
Target Start/End: Complemental strand, 25753233 - 25753152
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcacc 401  Q
    |||||||| ||||| ||||||||||||||||||||||||  |||||| ||||||||||||||| |||  ||||| |||||||    
T  25753233 ccaaagaactgactcccgatctcgaatcaaaagtgatcgccccaccagactttaggaccaaataagacgggcactcctcacc 25753152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 31050697 - 31050760
Alignment:
Q  335 ccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    ||||||||||||||||||||||||| |||||| ||||||| |||||||||| | ||||||||||    
T  31050697 ccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagtagggcacccctc 31050760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 417 - 480
Target Start/End: Original strand, 31050803 - 31050866
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacaca 480  Q
    |||||||||| |||||||||||| ||| ||||||||||||||||||||||||  ||||||||||    
T  31050803 ttgcagctagtcaccgactcccggtctcgaagcaaaagtaaccggcccaccggaaaccaacaca 31050866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 320 - 403
Target Start/End: Original strand, 46698805 - 46698888
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccct 403  Q
    |||||||| ||||| ||||||||||||||||||  ||||| |||||| |||  ||||||||||||||| |||||||| ||||||    
T  46698805 ccaaagaactgactcccgatctcgaatcaaaagcaatcggcccaccagactacaggaccaaatcagaagggcaccccacaccct 46698888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 417 - 467
Target Start/End: Original strand, 53823563 - 53823613
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccacc 467  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  53823563 ttgcagttagacaccgactcccgatctcgaagcaaaagtaaccggcccacc 53823613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 417 - 466
Target Start/End: Complemental strand, 19673040 - 19672991
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccac 466  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  19673040 ttgcagctagacactgactcccgatctcgaagcaaaagtaaccggcccac 19672991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 417 - 588
Target Start/End: Complemental strand, 25753111 - 25752942
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgacaacgacgtgatatatatgcggtc 516  Q
    ||||||||||||||||||||||||||| ||||||||| ||| | ||||| ||  ||||| || |||||||||| | |||  |||  ||| ||||| |||     
T  25753111 ttgcagctagacaccgactcccgatctcgaagcaaaattaagctgcccatcggaaaccagcaaacaaaaagtaaggcaa--acgacata-atatgtggtt 25753015  T
Q  517 gtgcaaacaacaaactgatcaaaaggaaaaagctcaac-acaacgagacccacttccttcaaacaccctaaac 588  Q
    ||||||||||||||   ||||||||||||| | |||||  ||||  ||||| |||| | ||||||||||||||    
T  25753014 gtgcaaacaacaaatatatcaaaaggaaaaggttcaactccaacatgacccgcttcttccaaacaccctaaac 25752942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 321 - 394
Target Start/End: Complemental strand, 35800549 - 35800476
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacc 394  Q
    ||||||| ||||| |||||||||||||||||| ||||||| ||||| |||| || |||||||||||| ||||||    
T  35800549 caaagaactgacttccgatctcgaatcaaaagcgatcggttcaccagacttcagaaccaaatcagaagggcacc 35800476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 323 - 387
Target Start/End: Original strand, 21387227 - 21387291
Alignment:
Q  323 aagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaa 387  Q
    ||||| ||||| |||||||||||||||||||||||||||||||| |||  || ||||||||||||    
T  21387227 aagaactgacttccgatctcgaatcaaaagtgatcggtccaccagactccagcaccaaatcagaa 21387291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 417 - 468
Target Start/End: Original strand, 19815366 - 19815417
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccg 468  Q
    |||||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  19815366 ttgcagctagacaccgactctcgatctcgaagcaaaagtaactggcccaccg 19815417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 320 - 402
Target Start/End: Complemental strand, 19673161 - 19673080
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccc 402  Q
    |||||||| ||||| | |||||||||| ||||| ||  ||||||||| |||||||||||||| ||||| ||||||||||||||    
T  19673161 ccaaagaactgactcctgatctcgaat-aaaagggaatggtccaccagactttaggaccaaaacagaagggcacccctcaccc 19673080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 321 - 398
Target Start/End: Complemental strand, 8255087 - 8255010
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    ||||||| ||||| | ||||||| ||||||||||||||| |||||| ||||||| ||||||| || | ||||||||||    
T  8255087 caaagaactgacttctgatctcggatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcacccctc 8255010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 321 - 398
Target Start/End: Complemental strand, 8268505 - 8268428
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    ||||||| ||||| | ||||||| ||||||||||||||| |||||| ||||||| ||||||| || | ||||||||||    
T  8268505 caaagaactgacttctgatctcggatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcacccctc 8268428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 201 - 290
Target Start/End: Original strand, 19815121 - 19815210
Alignment:
Q  201 caacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaa 290  Q
    ||||||||||| | |||| |||| |||||| ||||||| ||||||||| | | ||||||||| ||||||||||| | | |||||||||||    
T  19815121 caacaccaaagtttagccacatcggaaaagttcctatccgaaagatcatttagcttccaccatctctcgacctccggtccaccgaaagaa 19815210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 418 - 466
Target Start/End: Original strand, 46698928 - 46698976
Alignment:
Q  418 tgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccac 466  Q
    |||||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  46698928 tgcagctagacaccaactcccgatctcgaagcaaaagtaatcggcccac 46698976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 420 - 483
Target Start/End: Complemental strand, 8254962 - 8254899
Alignment:
Q  420 cagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaa 483  Q
    |||||||||  ||||||||||||| ||||| |||  |||||||||||||| |||||||||||||    
T  8254962 cagctagacctcgactcccgatctcgaagccaaaagaaccggcccaccgaaaaccaacacacaa 8254899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 420 - 483
Target Start/End: Complemental strand, 8268380 - 8268317
Alignment:
Q  420 cagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaa 483  Q
    |||||||||  ||||||||||||| ||||| |||  |||||||||||||| |||||||||||||    
T  8268380 cagctagacctcgactcccgatctcgaagccaaaagaaccggcccaccgaaaaccaacacacaa 8268317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 320 - 383
Target Start/End: Complemental strand, 16501792 - 16501729
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatc 383  Q
    |||||||  ||||| |||||||||||||||||| |||||| ||||||||||| |||| ||||||    
T  16501792 ccaaagagctgactcccgatctcgaatcaaaagcgatcggcccaccaaacttcaggatcaaatc 16501729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 320 - 359
Target Start/End: Original strand, 38637252 - 38637291
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcgg 359  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  38637252 ccaaagaattgactcccgatctcgaatcaaaagtgatcgg 38637291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 38639554 - 38639629
Alignment:
Q  421 agctagacaccgactcccgatcttgaagcaaaagtaaccggcccacc-gacaaccaacacacaaaaagtatgacaa 495  Q
    |||||| ||||| |||||||||| ||||||||| ||||||||||||| ||  |||| ||||||| |||||||||||    
T  38639554 agctaggcaccggctcccgatctcgaagcaaaactaaccggcccaccggagtaccagcacacaataagtatgacaa 38639629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 418 - 467
Target Start/End: Complemental strand, 12296113 - 12296064
Alignment:
Q  418 tgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccacc 467  Q
    ||||||||||| || ||||||||||| ||||||||||||| |||||||||    
T  12296113 tgcagctagacgccaactcccgatctcgaagcaaaagtaatcggcccacc 12296064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 16832923 - 16833016
Alignment:
Q  202 aacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccat 295  Q
    |||||||||| |||||| |||||||||||||| ||||  |||||||| ||| |||| | ||||||| ||| || ||  ||| ||||||||||||    
T  16832923 aacaccaaagttgagccacatccgaaaagctcatatcccaaagatcattcagcttcaatcacctcttgacttccgaaccactgaaagaaaccat 16833016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 418 - 467
Target Start/End: Original strand, 21988062 - 21988111
Alignment:
Q  418 tgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccacc 467  Q
    |||||||||||||| ||||| ||||| ||| |||||||||||||||||||    
T  21988062 tgcagctagacaccaactcctgatctcgaaacaaaagtaaccggcccacc 21988111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 335 - 403
Target Start/End: Complemental strand, 2825829 - 2825761
Alignment:
Q  335 ccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccct 403  Q
    ||||||||||||||||| ||||||| |||||  ||||||| |||||||||| |  ||||||||| ||||    
T  2825829 ccgatctcgaatcaaaaatgatcggcccaccggactttagaaccaaatcagcagagcacccctcgccct 2825761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 417 - 489
Target Start/End: Complemental strand, 30964379 - 30964307
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagta 489  Q
    |||||||||||| |||||| ||||||| ||||| |||  |||||||||| ||| ||||| ||||||| |||||    
T  30964379 ttgcagctagaccccgacttccgatctcgaagccaaatgaaccggcccatcgaaaaccagcacacaataagta 30964307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 316 - 384
Target Start/End: Complemental strand, 49747592 - 49747524
Alignment:
Q  316 tgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatca 384  Q
    ||||| |||||| |||||  ||||||| ||||||||||||||||  ||||| ||||||| |||||||||    
T  49747592 tgatcaaaagaactgactctcgatctcaaatcaaaagtgatcggctcaccagactttagaaccaaatca 49747524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 316 - 402
Target Start/End: Original strand, 19311359 - 19311443
Alignment:
Q  316 tgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccc 402  Q
    ||||||||| || ||||| ||| ||||||||||||||||||||  |||||| || |||  |||||||||||| | ||||||||||||    
T  19311359 tgatccaaataactgactcccg-tctcgaatcaaaagtgatcgacccaccagac-ttaaaaccaaatcagaaggacacccctcaccc 19311443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 202 - 292
Target Start/End: Complemental strand, 25753351 - 25753261
Alignment:
Q  202 aacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaac 292  Q
    |||| ||||| ||| || ||||| ||||||| || || ||||||||| ||| |||||||  ||| |||||||| ||| |||||||||||||    
T  25753351 aacatcaaagttgaaccacatccaaaaagcttctctccgaaagatcattcagcttccactgcctatcgacctccgatccaccgaaagaaac 25753261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 336 - 370
Target Start/End: Complemental strand, 26474881 - 26474847
Alignment:
Q  336 cgatctcgaatcaaaagtgatcggtccaccaaact 370  Q
    |||||||||||||||||||||||| ||||||||||    
T  26474881 cgatctcgaatcaaaagtgatcggcccaccaaact 26474847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 320 - 402
Target Start/End: Complemental strand, 38929888 - 38929806
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccc 402  Q
    |||||||| |||||   ||||||||||||||||||||||| ||| || |||| |||||| || ||||  ||||||||| ||||    
T  38929888 ccaaagaactgactcttgatctcgaatcaaaagtgatcggcccagcagacttcaggacccaaccagacgggcaccccttaccc 38929806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 329 - 403
Target Start/End: Complemental strand, 48098385 - 48098311
Alignment:
Q  329 tgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccct 403  Q
    ||||| ||||||||||| |||||||||| || ||| |   ||||| ||||||||||||| |||||| ||||||||    
T  48098385 tgactcccgatctcgaaacaaaagtgataggcccatcgggctttatgaccaaatcagaagggcacctctcaccct 48098311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 55 - 137
Target Start/End: Complemental strand, 49747889 - 49747807
Alignment:
Q  55 ggaacacccgaaaataaatactataaaaaacacccatgatgataacacccaccaaaatatacgttaccacctaaaacatactc 137  Q
    |||||| || |||||||| || ||||||||||||  ||| || |||||||||||||||  | || ||||||||||||| ||||    
T  49747889 ggaacatccaaaaataaacaccataaaaaacacctctgaggacaacacccaccaaaattcatgtcaccacctaaaacagactc 49747807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 382
Target Start/End: Complemental strand, 4305785 - 4305724
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaat 382  Q
    ||||||| | ||| ||||||||||||||||||||||||  |||||| ||| ||| |||||||    
T  4305785 caaagaactaactcccgatctcgaatcaaaagtgatcgccccaccagactatagtaccaaat 4305724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 467
Target Start/End: Complemental strand, 28966812 - 28966763
Alignment:
Q  418 tgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccacc 467  Q
    ||||||||||| || ||| ||||||| ||||| |||||||||||||||||    
T  28966812 tgcagctagacgccaacttccgatctcgaagccaaagtaaccggcccacc 28966763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 38636953 - 38637050
Alignment:
Q  55 ggaacacccgaaaataaatactataaaaaacacccatgatgataacacccaccaaaatatacgttaccacctaaaacatactcctacacgagaacaac 152  Q
    |||||||| ||||||||| ||  |||| || ||||  || || ||||||||| |||||| | || ||||||||||||| |||||| ||||| ||||||    
T  38636953 ggaacacctgaaaataaacaccttaaataaaacccccgaggacaacacccacgaaaatacatgtcaccacctaaaacaaactccttcacgaaaacaac 38637050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 290
Target Start/End: Complemental strand, 38929967 - 38929918
Alignment:
Q  241 aaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaa 290  Q
    |||||||||||||||||||||||||| | ||||| |  ||||||||||||    
T  38929967 aaagatcaatcaacttccaccacctcacaacctccggatcaccgaaagaa 38929918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 366
Target Start/End: Original strand, 40813802 - 40813847
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccacca 366  Q
    |||| ||||| || ||||||||||||||||||||||||| ||||||    
T  40813802 caaaaaattggctcccgatctcgaatcaaaagtgatcggcccacca 40813847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 41117688 - 41117784
Alignment:
Q  55 ggaacacccgaaaataaatactataaaaaacacccatgatgataacacccaccaaaatatacgttaccacctaaaacatactcctacacgagaacaac 152  Q
    |||||||||||||||||| ||  |||| |||||| |||| || |||||||||||||||| |  | |||||||| |||| |||| | ||||| ||||||    
T  41117688 ggaacacccgaaaataaacaccctaaataacacc-atgaggacaacacccaccaaaatacatatcaccacctagaacagactcatgcacgaaaacaac 41117784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 25753420 - 25753376
Alignment:
Q  157 ccaacctcactcgtcgtcattactcacccccaaagaaaaacaccc 201  Q
    ||||| ||| || |||||| |||||||||||||||||||||||||    
T  25753420 ccaacatcattcatcgtcactactcacccccaaagaaaaacaccc 25753376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 437 - 489
Target Start/End: Complemental strand, 38929753 - 38929701
Alignment:
Q  437 ccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagta 489  Q
    ||||||| |||||||||||||||||||||||   | ||| |||||||||||||    
T  38929753 ccgatctcgaagcaaaagtaaccggcccaccagaatccagcacacaaaaagta 38929701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 335 - 371
Target Start/End: Complemental strand, 53756802 - 53756766
Alignment:
Q  335 ccgatctcgaatcaaaagtgatcggtccaccaaactt 371  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  53756802 ccgatctcgaatcaaaagtgatcggcccaccagactt 53756766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 6e-42; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 417 - 634
Target Start/End: Complemental strand, 25647623 - 25647407
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaa-gtatgacaa-cgacgtgatatatatgcgg 514  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||| ||  |||||||||||||||| | ||||||| |||| ||||||| |    |    
T  25647623 ttgcagctagacaccgactcccgttctcgaagcaaaagtaaccggcccatcggaaaccaacacacaaaaaagaatgacaaacgacatgatataca----g 25647528  T
Q  515 tcgtgcaaacaacaaactgatcaaaaggaaaaagctcaacacaacgagacccacttccttcaaacaccctaaacaccttaacaaccctaaaaaccac-aa 613  Q
    | ||||||||||||||| | |||||||||||| || |||| ||||| ||| | |||||| |||||||||||||||||||||||||| |||||| ||| ||    
T  25647527 tggtgcaaacaacaaacaggtcaaaaggaaaaggcacaactcaacgggactcgcttcctccaaacaccctaaacaccttaacaaccttaaaaatcacgaa 25647428  T
Q  614 caagagttactgactacgaac 634  Q
    |||||| || |||| ||||||    
T  25647427 caagagctagtgacgacgaac 25647407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 417 - 607
Target Start/End: Original strand, 4464077 - 4464265
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccg-acaaccaacacacaaaaagtatgacaacgacgtgatatatatgcggt 515  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||| |||||||  |||  | | ||| |||||    
T  4464077 ttgcaactagacaccgactcccgatctcgaagcaaaagtaaccggcccaccgaaaaaccaacacacaaaaaggatgacaa-aacgaca-agataagcggt 4464174  T
Q  516 cgtgcaaacaacaaactgatcaaaaggaaaaagctcaacacaacgagacccacttccttcaaacaccctaaacaccttaacaaccctaaaaa 607  Q
     ||||||||||||||| |||||||||||||||||||| || || |  |||| | |||| ||||| || ||||||||| |||||||| |||||    
T  4464175 ggtgcaaacaacaaaccgatcaaaaggaaaaagctcagcagaaaggaacccgc-tcctccaaactccataaacacctaaacaaccccaaaaa 4464265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 202 - 401
Target Start/End: Complemental strand, 14879615 - 14879415
Alignment:
Q  202 aacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccatnnnnnn 301  Q
    ||||||||| | ||||| ||||||||||||||||||||||||||||| | | |||||||||||||||||||||  || ||||||||||||||||          
T  14879615 aacaccaaacccgagccacatccgaaaagctcctatctgaaagatcattaagcttccaccacctctcgacctcctatccaccgaaagaaaccataaaaag 14879516  T
Q  302 nnnnnnnnnnnnnc-tgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcac 400  Q
                 | |||||||| |||  |||| ||||||||||||||||||||||||| |||||| ||||||||||| |||||||| ||||||| ||||    
T  14879515 tccaaaaccaaaacttgatccaacgaacagactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacccaatcagaagggcacccgtcac 14879416  T
Q  401 c 401  Q
    |    
T  14879415 c 14879415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 320 - 400
Target Start/End: Complemental strand, 14194001 - 14193921
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcac 400  Q
    ||||||||  |||| || ||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||    
T  14194001 ccaaagaaccgactcccaatctcgaatcaaaagtgatcggtccgccagactttaggaccaaatcagaagggcacccctcac 14193921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 316 - 398
Target Start/End: Complemental strand, 37123447 - 37123365
Alignment:
Q  316 tgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    |||||||||||| ||||| || |||||||||||||||||||||| |||||||| |||||||||||| || || ||||||||||    
T  37123447 tgatccaaagaactgactcccaatctcgaatcaaaagtgatcggcccaccaaaatttaggaccaaaacataagggcacccctc 37123365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 417 - 634
Target Start/End: Complemental strand, 37123321 - 37123115
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgacaacgacgtgatatatatgcggtc 516  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||        | ||||| |||||||||||||||||||   | |||| |    |||       
T  37123321 ttgcagctagacaccgactcccgatctcgaagcaaaagtaatcg--------aaaaccagcacacaaaaagtatgacaaatgcatgatgt----gcgaag 37123234  T
Q  517 gtgcaaacaacaaactgatcaaaaggaaaaagctcaacacaacgagacccacttccttcaaacaccctaaacaccttaacaaccctaaaaaccac-aaca 615  Q
    ||||||||||| | | ||||||||||||||  |||||| ||| |  |||| |||||| |||||||||||||| |||||||||||| ||||| ||| ||||    
T  37123233 gtgcaaacaaccagcagatcaaaaggaaaagactcaactcaatggaacccgcttcctccaaacaccctaaactccttaacaaccccaaaaaacacaaaca 37123134  T
Q  616 agagttactgactacgaac 634  Q
    |||| || |||| ||||||    
T  37123133 agagctagtgacgacgaac 37123115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 421 - 607
Target Start/End: Complemental strand, 14193874 - 14193690
Alignment:
Q  421 agctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaa-gtatgacaa-cgacgtgatatatatgcggtcgt 518  Q
    ||||||||||||||||||||| | ||||||||||||  |||| || |   ||| | |||||||||| | ||||||| |||| |||||||    |||| ||    
T  14193874 agctagacaccgactcccgatatcgaagcaaaagtagtcggcgcatcagaaactagcacacaaaaaagaatgacaaacgacttgatata----cggtggt 14193779  T
Q  519 gcaaacaacaaactgatcaaaaggaaaaagctcaacacaacgagacccacttccttcaaacaccctaaacaccttaacaaccctaaaaa 607  Q
    | |||||| ||||  ||||||||||||| || |||| ||||| ||| | |||||| |||| |||||||||||||||||||||| |||||    
T  14193778 gtaaacaagaaacgaatcaaaaggaaaaggcacaactcaacgggactcgcttcctccaaaaaccctaaacaccttaacaaccccaaaaa 14193690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 23328385 - 23328448
Alignment:
Q  335 ccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||    
T  23328385 ccgatctcgaatcaaaagtgatcggtccaccaaactttagaaccaaatcaacagggcacccctc 23328448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 204 - 295
Target Start/End: Complemental strand, 25647863 - 25647772
Alignment:
Q  204 caccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccat 295  Q
    ||||||| ||||||| | |||||||||||| || | ||||||||| ||||||| ||||||||||||||||| ||| |||| |||||||||||    
T  25647863 caccaaaactgagccacgtccgaaaagctcataaccgaaagatcattcaactttcaccacctctcgacctccgatccaccaaaagaaaccat 25647772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 33143850 - 33143943
Alignment:
Q  202 aacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccat 295  Q
    |||||||||||||| || || |  |||| ||||||| | | |||||||||| ||||||||||||| ||||||||||| ||||||||||||||||    
T  33143850 aacaccaaagctgatccacaacgaaaaaactcctatataagagatcaatcagcttccaccacctcgcgacctctgatccaccgaaagaaaccat 33143943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 320 - 395
Target Start/End: Original strand, 40023592 - 40023667
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcaccc 395  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| ||||||  || ||||||| | |||||||    
T  40023592 ccaaagaatcgactcccgatctcgaatcaaaagtgatcggtccaccagactttaaaacaaaatcagcagggcaccc 40023667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 202 - 292
Target Start/End: Original strand, 14755166 - 14755256
Alignment:
Q  202 aacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaac 292  Q
    ||||||||||||||||| ||||| | |||||| |  | ||||||||| ||||||||||||| ||||||||||| ||| || ||||||||||    
T  14755166 aacaccaaagctgagccacatccaacaagctcatccccgaaagatcattcaacttccaccatctctcgacctccgatccatcgaaagaaac 14755256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 417 - 487
Target Start/End: Original strand, 14755405 - 14755475
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaag 487  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||| ||  || || |||||||||||    
T  14755405 ttgcagctagataccgactcccgatctcgaagcaaaagtaaccggcccatcggaaatcagcacacaaaaag 14755475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 321 - 395
Target Start/End: Complemental strand, 19176562 - 19176488
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcaccc 395  Q
    ||||||| ||||| ||||||||||||||||||||||||| |||||| ||||||| ||||||| || | |||||||    
T  19176562 caaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaattagcagggcaccc 19176488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 321 - 382
Target Start/End: Complemental strand, 43012435 - 43012374
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaat 382  Q
    ||||||| ||||| ||||||||||||||||||||||||| |||||| ||||||| |||||||    
T  43012435 caaagaactgactcccgatctcgaatcaaaagtgatcgggccaccagactttagaaccaaat 43012374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 316 - 371
Target Start/End: Original strand, 33143965 - 33144020
Alignment:
Q  316 tgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactt 371  Q
    |||||||||||| ||||| |||||||||||||||||||||||| ||||||| ||||    
T  33143965 tgatccaaagaactgactcccgatctcgaatcaaaagtgatcgatccaccagactt 33144020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 321 - 395
Target Start/End: Original strand, 9584074 - 9584148
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcaccc 395  Q
    ||||||| ||||| |||||||||||||||||||||||| ||||||| ||||||| | ||||| || | |||||||    
T  9584074 caaagaactgactcccgatctcgaatcaaaagtgatcgatccaccagactttagtatcaaattagcagggcaccc 9584148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 213 - 295
Target Start/End: Original strand, 28937627 - 28937709
Alignment:
Q  213 tgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccat 295  Q
    |||||| ||||| ||||||||||  |||||| |||| ||| ||||||||| |||| |||||| ||| ||||||||||||||||    
T  28937627 tgagccacatccaaaaagctcctccctgaaacatcattcagcttccaccatctcttgacctccgatccaccgaaagaaaccat 28937709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 201 - 290
Target Start/End: Original strand, 39021177 - 39021267
Alignment:
Q  201 caacaccaaagctgagccgcatccgaaaagctcctatctgaaa-gatcaatcaacttccaccacctctcgacctctgattcaccgaaagaa 290  Q
    ||||||||||||| |||| |||||||||| ||| |||| |||| ||||||||| || |||||| ||||||||||| ||| |||| ||||||    
T  39021177 caacaccaaagctaagccacatccgaaaaactcatatccgaaaagatcaatcagctaccaccatctctcgacctccgatccaccaaaagaa 39021267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 336 - 398
Target Start/End: Complemental strand, 45398841 - 45398779
Alignment:
Q  336 cgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    ||||||||||||||||||||||||||||||| ||||||   ||||||||| | ||||||||||    
T  45398841 cgatctcgaatcaaaagtgatcggtccaccagactttaaatccaaatcagcagggcacccctc 45398779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 320 - 402
Target Start/End: Complemental strand, 47945767 - 47945685
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccc 402  Q
    ||||| || ||||| ||||||||||||||||||||||||| |||||  ||||||||||| || ||||  ||||||||| ||||    
T  47945767 ccaaataactgactcccgatctcgaatcaaaagtgatcggcccaccggactttaggacccaaccagacgggcaccccttaccc 47945685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 321 - 398
Target Start/End: Original strand, 2392527 - 2392604
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    ||||||| ||||| || |||||||||||||||||||||||||||||  || ||| ||||||| || | ||||||||||    
T  2392527 caaagaactgacttccaatctcgaatcaaaagtgatcggtccaccaggctatagtaccaaattagcagggcacccctc 2392604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 321 - 398
Target Start/End: Original strand, 2394274 - 2394351
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    ||||||| ||||| || |||||||||||||||||||||||||||||  || ||| ||||||| || | ||||||||||    
T  2394274 caaagaactgacttccaatctcgaatcaaaagtgatcggtccaccaggctatagtaccaaattagcagggcacccctc 2394351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 335 - 400
Target Start/End: Complemental strand, 25647730 - 25647665
Alignment:
Q  335 ccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcac 400  Q
    |||||||||||||||||||||| || ||  || |||||||||||||||||||| ||||||| ||||    
T  25647730 ccgatctcgaatcaaaagtgataggcccgtcagactttaggaccaaatcagaagggcacccttcac 25647665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 417 - 489
Target Start/End: Complemental strand, 19176441 - 19176369
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagta 489  Q
    |||||||||||| |||||||| ||||| ||||| |||| |||| ||||||||| ||||| ||||||| |||||    
T  19176441 ttgcagctagaccccgactcctgatctcgaagccaaaggaaccagcccaccgaaaaccagcacacaataagta 19176369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 23328249 - 23328337
Alignment:
Q  201 caacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaaga 289  Q
    ||||||| |||||||||| ||| ||||||||||||| | ||| || |||  | ||||||| ||||||||||||| ||| ||||||||||    
T  23328249 caacacccaagctgagccacattcgaaaagctcctaaccgaatgaacaaggagcttccacaacctctcgacctccgatccaccgaaaga 23328337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 323 - 398
Target Start/End: Original strand, 34475777 - 34475852
Alignment:
Q  323 aagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    |||| |||||| ||||||||||||||||||||||||| |||||| ||| ||| | ||||| || | ||||||||||    
T  34475777 aagatttgactcccgatctcgaatcaaaagtgatcggcccaccagactatagaaacaaattagcagggcacccctc 34475852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 483
Target Start/End: Original strand, 2392649 - 2392715
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaa 483  Q
    |||||||||||| |||||||||||||||||||| |||  ||||| |||| ||| ||||| |||||||    
T  2392649 ttgcagctagaccccgactcccgatcttgaagccaaatgaaccgtcccatcgaaaaccagcacacaa 2392715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 483
Target Start/End: Original strand, 2394396 - 2394462
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaa 483  Q
    |||||||||||| |||||||||||||||||||| |||  ||||| |||| ||| ||||| |||||||    
T  2394396 ttgcagctagaccccgactcccgatcttgaagccaaatgaaccgtcccatcgaaaaccagcacacaa 2394462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 374
Target Start/End: Original strand, 14755285 - 14755339
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttag 374  Q
    |||||||| ||||| ||||||| ||||||||||||||||| |||||| |||||||    
T  14755285 ccaaagaactgactcccgatcttgaatcaaaagtgatcggcccaccagactttag 14755339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 366
Target Start/End: Original strand, 39021292 - 39021342
Alignment:
Q  316 tgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccacca 366  Q
    |||||||||||| ||||| |||| |||||||||||||||||||| ||||||    
T  39021292 tgatccaaagaactgactcccgacctcgaatcaaaagtgatcggcccacca 39021342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 321 - 366
Target Start/End: Complemental strand, 17551017 - 17550972
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccacca 366  Q
    ||||||| ||||| ||||||||||||||||||||||||| ||||||    
T  17551017 caaagaactgactcccgatctcgaatcaaaagtgatcggcccacca 17550972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 321 - 398
Target Start/End: Complemental strand, 20611843 - 20611766
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    ||||||| ||||| ||||||||||||||||| ||||||| ||| |||||| ||| || |||| || | ||||||||||    
T  20611843 caaagaactgactcccgatctcgaatcaaaaatgatcggcccaacaaactatagtacgaaattagcagggcacccctc 20611766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 320 - 396
Target Start/End: Complemental strand, 5556631 - 5556555
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccc 396  Q
    |||||||| ||||| |||||||||||||||||| |||||  |||||| |||  | |||||||||| || ||||||||    
T  5556631 ccaaagaactgactcccgatctcgaatcaaaagcgatcgccccaccagactacaagaccaaatcaaaagggcacccc 5556555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 521 - 613
Target Start/End: Complemental strand, 47235554 - 47235462
Alignment:
Q  521 aaacaacaaactgatcaaaaggaaaaagctcaacacaacgagacccacttccttcaaacaccctaaacaccttaacaaccctaaaaaccacaa 613  Q
    |||||||||||  ||||||||||||| ||||||||||||| ||| | |  ||| ||||| || ||||||||| ||| |||| ||||| |||||    
T  47235554 aaacaacaaacaaatcaaaaggaaaaggctcaacacaacgtgacacgcaccctccaaactccgtaaacacctaaaccacccaaaaaaacacaa 47235462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 55 - 139
Target Start/End: Original strand, 48893073 - 48893156
Alignment:
Q  55 ggaacacccgaaaataaatactataaaaaacacccatgatgataacacccaccaaaatatacgttaccacctaaaacatactcct 139  Q
    |||||| ||||||||||| ||| |||||| ||||| ||| || |||||||||||||||| | || ||||||||||| | ||||||    
T  48893073 ggaacatccgaaaataaacactttaaaaa-cacccctgaagacaacacccaccaaaatacatgtcaccacctaaaagagactcct 48893156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 387
Target Start/End: Original strand, 1652906 - 1652973
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaa 387  Q
    |||||||| | ||| | ||||||||||||||||||||||| |||| | | || |||||||||||||||    
T  1652906 ccaaagaactaactcctgatctcgaatcaaaagtgatcggcccacaagagttcaggaccaaatcagaa 1652973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 402
Target Start/End: Original strand, 30935425 - 30935492
Alignment:
Q  335 ccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccc 402  Q
    ||||||| |||||||||| |||| | ||||||||||| |  |||||||||||| ||||||||| ||||    
T  30935425 ccgatcttgaatcaaaagcgatcagcccaccaaacttcaaaaccaaatcagaagggcaccccttaccc 30935492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 468
Target Start/End: Original strand, 40023713 - 40023764
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccg 468  Q
    ||||||||||||||| ||| ||||||| ||||||||| ||||||| ||||||    
T  40023713 ttgcagctagacaccaacttccgatctcgaagcaaaaataaccggtccaccg 40023764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 289
Target Start/End: Complemental strand, 43012560 - 43012469
Alignment:
Q  199 cccaacaccaaagctgagccgcatc-cgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaaga 289  Q
    ||||||||| |||||||||| |||  |||| ||| |||  | ||| |||||  |||||||||| ||||| ||||||||||||||||||||||    
T  43012560 cccaacacccaagctgagccacatttcgaagagcacctgaccgaacgatcatgcaacttccacaacctcgcgacctctgattcaccgaaaga 43012469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 467
Target Start/End: Original strand, 823577 - 823627
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccacc 467  Q
    ||||| ||||||||| ||||| ||||||||||||||| ||||||| |||||    
T  823577 ttgcaactagacaccaactcctgatcttgaagcaaaattaaccggtccacc 823627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 421 - 467
Target Start/End: Complemental strand, 5556505 - 5556459
Alignment:
Q  421 agctagacaccgactcccgatcttgaagcaaaagtaaccggcccacc 467  Q
    ||||||||||| ||| ||||||| ||| |||||||||||||||||||    
T  5556505 agctagacaccaacttccgatctcgaatcaaaagtaaccggcccacc 5556459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 14194267 - 14194209
Alignment:
Q  80 aaaaacacccatgatgataacacccaccaaaatatacgttaccacctaaaacatactcc 138  Q
    |||||||| ||||| ||  ||||||||||||||| |||| ||||||||||||| |||||    
T  14194267 aaaaacactcatgaggaccacacccaccaaaatacacgtcaccacctaaaacagactcc 14194209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 55 - 145
Target Start/End: Original strand, 50518809 - 50518898
Alignment:
Q  55 ggaacacccgaaaataaatactataaaaaacacccatgatgataacacccaccaaaatatacgttaccacctaaaacatactcctacacga 145  Q
    |||||||||||||||||| ||  ||||| |||||||||| ||  ||||||| ||||||| || | |||| |||||||| |||||| |||||    
T  50518809 ggaacacccgaaaataaacaccctaaaa-acacccatgaggaccacacccaacaaaatacacctcaccatctaaaacagactccttcacga 50518898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 465
Target Start/End: Original strand, 23328491 - 23328537
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggccca 465  Q
    ||||||||||||||| ||||||||||| |||||||||  ||||||||||    
T  23328491 ttgcagctagacaccaactcccgatctcgaagcaaaa--aaccggccca 23328537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 295
Target Start/End: Complemental strand, 37123559 - 37123468
Alignment:
Q  202 aacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccat 295  Q
    |||| |||||||||||| |||| ||||||||| | ||||||||||||  || |||||||||||| |||| ||| || ||  |||||||||||||    
T  37123559 aacatcaaagctgagccacatc-gaaaagctcatgtctgaaagatcatacagcttccaccacctatcgaactccga-tcctcgaaagaaaccat 37123468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 482
Target Start/End: Complemental strand, 47235654 - 47235589
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacaca 482  Q
    |||||||||||| | |||||||||||| ||||| |||  |||||||||| ||| ||||| ||||||    
T  47235654 ttgcagctagaccctgactcccgatctcgaagccaaatgaaccggcccatcgaaaaccagcacaca 47235589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 335 - 371
Target Start/End: Original strand, 20710743 - 20710779
Alignment:
Q  335 ccgatctcgaatcaaaagtgatcggtccaccaaactt 371  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  20710743 ccgatctcgaatcaaaagtgatcggcccaccagactt 20710779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 21342717 - 21342629
Alignment:
Q  201 caacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaaga 289  Q
    ||||||| |||  ||||| ||| ||||||||| ||| | ||| || ||| || ||||||| ||||||||||||||||| || |||||||    
T  21342717 caacacccaagtcgagccacattcgaaaagcttctaaccgaatgaacaagcagcttccacaacctctcgacctctgatccatcgaaaga 21342629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 25594296 - 25594352
Alignment:
Q  83 aacacccatgatgataacacccaccaaaatatacgttaccacctaaaacatactcct 139  Q
    ||||||||||| || ||||||||||| |||| || | || |||||||||||||||||    
T  25594296 aacacccatgaggacaacacccaccacaataaacatcactacctaaaacatactcct 25594352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 417 - 481
Target Start/End: Original strand, 34475897 - 34475961
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacac 481  Q
    |||||||||||| |||||||||||||| ||||| |||  || ||||||| ||| ||||| |||||    
T  34475897 ttgcagctagaccccgactcccgatctcgaagccaaatgaatcggcccatcgaaaaccagcacac 34475961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 202 - 266
Target Start/End: Original strand, 37999061 - 37999125
Alignment:
Q  202 aacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctc 266  Q
    |||||||||| ||| || | ||| |||||||||||||  |||||||||| | |||||||||||||    
T  37999061 aacaccaaagttgatccacctccaaaaagctcctatccaaaagatcaattagcttccaccacctc 37999125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 40023471 - 40023559
Alignment:
Q  201 caacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaaga 289  Q
    |||||||  ||||||||| ||| ||||||||||||| | ||| || ||  || ||||||| ||||| || |||||||| ||||||||||    
T  40023471 caacaccctagctgagccacattcgaaaagctcctaaccgaatgaacatgcagcttccacaacctcccgtcctctgatccaccgaaaga 40023559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 1e-39; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 417 - 600
Target Start/End: Complemental strand, 8745092 - 8744912
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgac-aacgacgtgatatatatgcggt 515  Q
    |||||||||||||||| || ||||||| ||||||||||||||||||||||||| ||||| ||||||||||| ||||| |||||| ||    |||||||||    
T  8745092 ttgcagctagacaccgccttccgatctcgaagcaaaagtaaccggcccaccgaaaaccagcacacaaaaagcatgacaaacgacatg----atatgcggt 8744997  T
Q  516 cgtgcaaacaacaaactgatcaaaaggaaaaagctcaacacaacgagacccacttccttcaaacaccctaaacaccttaacaacc 600  Q
     ||||||||||||||  ||||||||||| || ||||||| |||| |||| | |||||| |||||| | |||||||||||||||||    
T  8744996 ggtgcaaacaacaaatagatcaaaaggagaaggctcaactcaacaagactcgcttcctccaaacatcgtaaacaccttaacaacc 8744912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 202 - 403
Target Start/End: Complemental strand, 8745332 - 8745131
Alignment:
Q  202 aacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccatnnnnnn 301  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||  || ||||||| ||||||||||||| ||| ||||||||||||||||          
T  8745332 aacaccaaagctgagccacatccgaaaagctcctatctgaaagatcatgcagcttccacaacctctcgacctccgatccaccgaaagaaaccataaaaag 8745233  T
Q  302 nnnnnnnnnnnnnctgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcacc 401  Q
                  |||||||| ||| ||| | ||||||||||||||||||||||||| |||||| | |||||||||||||||||| | |||||||||||    
T  8745232 cccaaaaccaaacttgatccaacgaactgaatcccgatctcgaatcaaaagtgatcggcccaccagaatttaggaccaaatcagaaggccacccctcacc 8745133  T
Q  402 ct 403  Q
    ||    
T  8745132 ct 8745131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 202 - 397
Target Start/End: Original strand, 24324699 - 24324895
Alignment:
Q  202 aacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccatnnnnnn 301  Q
    ||||||||||||||||| || |||||||||||||| | ||||||||| ||| ||||||||||| ||||||||| ||| |||| |||||||||||          
T  24324699 aacaccaaagctgagccacagccgaaaagctcctaaccgaaagatcattcagcttccaccacccctcgacctccgatccacctaaagaaaccataaaaag 24324798  T
Q  302 nnnnnnnnnnnnnct-gatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccct 397  Q
                 || || |||||||||||||| ||||||||||||||||| ||||||| ||||||||||||| ||||||||||||| |||||||||    
T  24324799 cccaaaaccaaaacttgagccaaagaattgactcccgatctcgaatcaaaattgatcggcccaccaaactttaagaccaaatcagaagggcacccct 24324895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 417 - 598
Target Start/End: Complemental strand, 16954592 - 16954414
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgacaacgacgtgatatatatgcggtc 516  Q
    ||||||||||||||| |||| |||||| ||||||||||||| ||||||| ||  ||||| ||||||  |||||||||||  |||  | | |||||| ||     
T  16954592 ttgcagctagacaccaactctcgatctggaagcaaaagtaatcggcccatcggaaaccagcacacagtaagtatgacaa--acgaca-agatatgcagtg 16954496  T
Q  517 gtgcaaacaacaaactgatcaaaaggaaaaagctcaacacaacgagacccacttccttcaaacaccctaaacaccttaacaa 598  Q
    |||||||||||||||  ||| ||||||||| ||||||| ||||||||||| || ||| |||| |||||||||||||||||||    
T  16954495 gtgcaaacaacaaacatatccaaaggaaaaggctcaactcaacgagacccgctacctccaaaaaccctaaacaccttaacaa 16954414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 418 - 606
Target Start/End: Original strand, 42533395 - 42533581
Alignment:
Q  418 tgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgac-aacgacgtgatatatatgcggtc 516  Q
    ||||||| ||||| |||||||||||| ||||||||||||||||||||| ||   |||| ||||||||||||||||| ||||||  || |||    ||||     
T  42533395 tgcagctggacacagactcccgatctcgaagcaaaagtaaccggcccatcggagaccagcacacaaaaagtatgacaaacgacaagagata----cggtg 42533490  T
Q  517 gtgcaaacaa-caaactgatcaaaaggaaaaagctcaacacaacgagacccacttccttcaaacaccctaaacaccttaacaaccctaaaa 606  Q
    |||||||||| |||||  ||||||||||||| |||||  |||||| ||| | |||||| ||| |||| |||||||||||||||||| ||||    
T  42533491 gtgcaaacaaccaaacaaatcaaaaggaaaaggctcagaacaacgggacacgcttcctccaaccaccttaaacaccttaacaacccaaaaa 42533581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 320 - 402
Target Start/End: Complemental strand, 3478413 - 3478331
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccc 402  Q
    |||||||| | ||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||    
T  3478413 ccaaagaactaactcccgatctcgaatcaaaagtgatcggcccaccaaactttaggaccaaaacagaagggcacccctcaccc 3478331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 320 - 402
Target Start/End: Original strand, 42533272 - 42533354
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccc 402  Q
    |||||| ||||||| ||||||||||||||||||||||| | |||||| |||||||||||||||||| | ||||||||||||||    
T  42533272 ccaaaggattgactcccgatctcgaatcaaaagtgatcagcccaccagactttaggaccaaatcaggagggcacccctcaccc 42533354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 321 - 401
Target Start/End: Complemental strand, 16954713 - 16954633
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcacc 401  Q
    ||||||| |||||  |||||||||| ||||||||||||||| |||| |||||||||||||||||||| |||||||||||||    
T  16954713 caaagaactgactttcgatctcgaaacaaaagtgatcggtcaaccagactttaggaccaaatcagaagggcacccctcacc 16954633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 420 - 607
Target Start/End: Complemental strand, 1320730 - 1320548
Alignment:
Q  420 cagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgacaa-cgacgtgatatatatgcggtcgt 518  Q
    |||||||||||| ||||||||||| |||||||||  || ||| ||||||  |||||||||| |||||||||| ||| |||| ||    ||||||||| ||    
T  1320730 cagctagacaccaactcccgatctcgaagcaaaa-aaatcggtccaccggaaaccaacacagaaaaagtatggcaaccgacatg----atatgcggtggt 1320636  T
Q  519 gcaaacaacaaactgatcaaaaggaaaaagctcaacacaacgagacccacttccttcaaacaccctaaacaccttaacaaccctaaaaa 607  Q
    ||||||||||||| |||  ||||| |||  |||| | ||||| |||||||||||  |||||||| |||||||| |||||| ||||||||    
T  1320635 gcaaacaacaaacagattcaaagggaaagactcagctcaacgggacccacttccaccaaacaccataaacacc-taacaatcctaaaaa 1320548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 201 - 400
Target Start/End: Original strand, 6716637 - 6716836
Alignment:
Q  201 caacaccaaagctgagccgcatccgaaaagctcctatctgaaa-gatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccatnnnn 299  Q
    |||||||||||||||||| |||||| |||  || |||| |||| ||||||||| |||||||||||||||||| || ||| ||||||||||||||||        
T  6716637 caacaccaaagctgagccacatccggaaaaatcttatccgaaaagatcaatcagcttccaccacctctcgacttc-gatccaccgaaagaaaccataaaa 6716735  T
Q  300 nnnnnnnnnnnnnnnctgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctca 399  Q
                    ||| |||||||| ||||| ||||||||||||||||||||||||| | |||| |||||| ||  ||||||||| |||||||||||    
T  6716736 aacccaagaccaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcggccaaccagactttatgattaaatcagaagggcacccctca 6716835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 320 - 402
Target Start/End: Complemental strand, 1320855 - 1320773
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccc 402  Q
    |||||||| ||||| ||||| | ||||||||||||||||| |||||| |||||| |||||||||| || ||||||||||||||    
T  1320855 ccaaagaactgacttccgattttgaatcaaaagtgatcggcccaccagactttatgaccaaatcaaaagggcacccctcaccc 1320773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 320 - 398
Target Start/End: Complemental strand, 6584970 - 6584892
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    |||||||  ||||| ||||||||||||||||||||||||| |||||| ||||||| |||||||||| | ||||||||||    
T  6584970 ccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcacccctc 6584892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 417 - 495
Target Start/End: Original strand, 6716878 - 6716956
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgacaa 495  Q
    |||||||||||||||||||||||||||  ||| ||||||||| |||||||||| ||||| ||| ||||||||| |||||    
T  6716878 ttgcagctagacaccgactcccgatctcaaagtaaaagtaactggcccaccgaaaaccagcacgcaaaaagtaagacaa 6716956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 205 - 295
Target Start/End: Original strand, 42533158 - 42533248
Alignment:
Q  205 accaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccat 295  Q
    ||||||||||| ||  ||||||||||||| |||||||||||||  |||  | |||||||||| ||||||||||| ||||||||||||||||    
T  42533158 accaaagctgatccatatccgaaaagctcttatctgaaagatcgttcagttgccaccacctcacgacctctgatccaccgaaagaaaccat 42533248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 16828957 - 16829038
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccc 402  Q
    ||||||| |||||  |||||||||| ||||||||||| | | |||| |||||||||||||||||||| ||||||||||||||    
T  16828957 caaagaactgactttcgatctcgaaacaaaagtgatcagccaaccagactttaggaccaaatcagaagggcacccctcaccc 16829038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 344 - 401
Target Start/End: Complemental strand, 44755663 - 44755606
Alignment:
Q  344 aatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcacc 401  Q
    |||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||    
T  44755663 aatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccctcacc 44755606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 320 - 387
Target Start/End: Complemental strand, 12480947 - 12480880
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaa 387  Q
    |||||||| ||||| |||||||||||||||||| |||||| ||||||||||| ||||| |||||||||    
T  12480947 ccaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccaaacttcaggacaaaatcagaa 12480880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 320 - 402
Target Start/End: Complemental strand, 34390023 - 34389941
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccc 402  Q
    |||||||  ||||| ||||||||||||||||||||||||| |||||| ||||||  |||||||||| | ||||| ||||||||    
T  34390023 ccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttaaaaccaaatcagcagggcactcctcaccc 34389941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 323 - 403
Target Start/End: Complemental strand, 25160873 - 25160793
Alignment:
Q  323 aagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccct 403  Q
    |||| |||||| ||||||||||||||||||| |||||||||||| ||| ||| ||||||| || | |||||||||| ||||    
T  25160873 aagatttgacttccgatctcgaatcaaaagtaatcggtccaccagactatagaaccaaattagcagggcacccctcgccct 25160793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 139
Target Start/End: Original strand, 6492852 - 6492934
Alignment:
Q  57 aacacccgaaaataaatactataaaaaacacccatgatgataacacccaccaaaatatacgttaccacctaaaacatactcct 139  Q
    |||||| ||||||||| || |||||||||||| |||| || |||| ||||||||||  |||| ||||||||||||| ||||||    
T  6492852 aacacctgaaaataaacaccataaaaaacacctatgaggacaacatccaccaaaattcacgtcaccacctaaaacagactcct 6492934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 419 - 493
Target Start/End: Complemental strand, 44755564 - 44755490
Alignment:
Q  419 gcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgac 493  Q
    |||||||||||||||||||||| ||  |||||||| |||  |||||||||  ||||| |||||||||||||||||    
T  44755564 gcagctagacaccgactcccgacctcaaagcaaaattaatgggcccaccgctaaccagcacacaaaaagtatgac 44755490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 324 - 373
Target Start/End: Complemental strand, 9349806 - 9349757
Alignment:
Q  324 agaattgactgccgatctcgaatcaaaagtgatcggtccaccaaacttta 373  Q
    |||||||||| ||||||||||||||||||||||||| |||||| ||||||    
T  9349806 agaattgactcccgatctcgaatcaaaagtgatcggcccaccagacttta 9349757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 321 - 398
Target Start/End: Complemental strand, 10244242 - 10244165
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    ||||||| ||||| ||||||||||||||||||||||||| |||||| | | ||| ||||||| || | ||||||||||    
T  10244242 caaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagattatagcaccaaattagcagggcacccctc 10244165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 320 - 397
Target Start/End: Complemental strand, 13311900 - 13311823
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccct 397  Q
    |||||||| ||||| ||||||||||||||||||||||||| |||||| |||  | ||||||| ||||  |||||||||    
T  13311900 ccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactacatgaccaaaccagacgggcacccct 13311823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 321 - 398
Target Start/End: Complemental strand, 38306321 - 38306244
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    ||||||| ||||| || |||||||||||||||||||||| |||||| ||| ||| ||||||| || | ||||||||||    
T  38306321 caaagaactgactcccaatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccctc 38306244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 329 - 402
Target Start/End: Complemental strand, 38485608 - 38485535
Alignment:
Q  329 tgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccc 402  Q
    ||||| ||||||||||||||||||||||||| |||||| |||| || || || |||||| ||||||||| ||||    
T  38485608 tgactcccgatctcgaatcaaaagtgatcggcccaccagacttcagaacaaattcagaagggcaccccttaccc 38485535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 41089777 - 41089830
Alignment:
Q  329 tgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaat 382  Q
    ||||| || ||||||||||||||||||||||||||||| ||||||| |||||||    
T  41089777 tgactcccaatctcgaatcaaaagtgatcggtccaccagactttagtaccaaat 41089830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 145
Target Start/End: Original strand, 24324520 - 24324607
Alignment:
Q  57 aacacccgaaaataaatactataaaaaacacccatgatgataacacccaccaaaatatacgttaccacctaaaacatactcctacacga 145  Q
    |||||||||||||||| ||| | |||||||||| ||| || ||||| |||||||||| |||| ||||| ||||||| |||||| |||||    
T  24324520 aacacccgaaaataaacactct-aaaaacacccttgaggacaacactcaccaaaatacacgtcaccacttaaaacagactccttcacga 24324607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 207 - 290
Target Start/End: Complemental strand, 23983381 - 23983298
Alignment:
Q  207 caaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaa 290  Q
    ||||||||| ||  ||||||||||||| |||  ||||||||| ||||||  ||||||||||| ||||| ||| |||||||||||    
T  23983381 caaagctgaaccagatccgaaaagctcatattcgaaagatcattcaactgtcaccacctctcaacctccgatacaccgaaagaa 23983298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 417 - 480
Target Start/End: Original strand, 35745968 - 35746031
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacaca 480  Q
    |||| ||||| |||| ||| ||||||| ||||||||||||||||| ||||||| ||||||||||    
T  35745968 ttgctgctagtcaccaacttccgatctcgaagcaaaagtaaccggtccaccgaaaaccaacaca 35746031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 403
Target Start/End: Complemental strand, 23983251 - 23983174
Alignment:
Q  325 gaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccct 403  Q
    ||||||||| |||||||||||||||||  |||||  |||||| |||| | |||||||| || |||||||||||||||||    
T  23983251 gaattgactcccgatctcgaatcaaaaacgatcgacccaccagacttcaagaccaaattag-aaggcacccctcaccct 23983174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 483
Target Start/End: Complemental strand, 37794938 - 37794872
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaa 483  Q
    |||||||||||| || ||||||||||| ||||| |||  |||||||||||||| ||||| |||||||    
T  37794938 ttgcagctagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaaccagcacacaa 37794872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 483
Target Start/End: Complemental strand, 38306199 - 38306133
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaa 483  Q
    |||||||||||| |||||||||| ||| ||||| |||  |||||||||||||| ||||| |||||||    
T  38306199 ttgcagctagaccccgactcccgttctcgaagccaaatgaaccggcccaccgaaaaccagcacacaa 38306133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 295
Target Start/End: Complemental strand, 44755729 - 44755675
Alignment:
Q  241 aaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccat 295  Q
    |||||||| ||| |||||||||||| ||||||||||||  |||||||||||||||    
T  44755729 aaagatcattcagcttccaccacctatcgacctctgatataccgaaagaaaccat 44755675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 3419685 - 3419738
Alignment:
Q  329 tgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaat 382  Q
    ||||| ||||||||||||||||||||||| | |||||| ||||||| |||||||    
T  3419685 tgactcccgatctcgaatcaaaagtgatcagcccaccacactttagtaccaaat 3419738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 321 - 398
Target Start/End: Original strand, 5860309 - 5860386
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    ||||||||||||| |||||||||||||||||| ||| || |||||  ||| ||| ||||||| || | ||||||||||    
T  5860309 caaagaattgactcccgatctcgaatcaaaagcgataggcccaccggactatagtaccaaattagcagggcacccctc 5860386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 321 - 382
Target Start/End: Complemental strand, 33435169 - 33435108
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaat 382  Q
    ||||||| ||||| ||||||||||||||||||||||||   ||||| ||||||| |||||||    
T  33435169 caaagaactgactcccgatctcgaatcaaaagtgatcgtctcaccagactttagtaccaaat 33435108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 522 - 634
Target Start/End: Complemental strand, 37794838 - 37794726
Alignment:
Q  522 aacaacaaactgatcaaaaggaaaaagctcaacacaacgagacccacttccttcaaacaccctaaacaccttaacaaccctaaaaaccac-aacaagagt 620  Q
    ||||||||||  ||||||||||||| ||||||||||| | ||| |||  ||||||||| || ||||||||| ||| |||| ||||| ||| ||||||||     
T  37794838 aacaacaaacaaatcaaaaggaaaatgctcaacacaatgtgacacacacccttcaaactccgtaaacacctaaaccaccc-aaaaagcacaaacaagagc 37794740  T
Q  621 tactgactacgaac 634  Q
    || |||| ||||||    
T  37794739 tagtgacgacgaac 37794726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 398
Target Start/End: Original strand, 47325914 - 47325983
Alignment:
Q  329 tgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    ||||| |||||||| ||||||||| |||||| |||||| ||| ||| ||||||| || ||||||||||||    
T  47325914 tgactcccgatctcaaatcaaaagcgatcggcccaccagactatagtaccaaattagcaaggcacccctc 47325983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 417 - 465
Target Start/End: Complemental strand, 3478291 - 3478243
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggccca 465  Q
    |||||||||| |||||||||||||||  ||||||||||||| |||||||    
T  3478291 ttgcagctagtcaccgactcccgatcccgaagcaaaagtaatcggccca 3478243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 521 - 613
Target Start/End: Complemental strand, 33434948 - 33434856
Alignment:
Q  521 aaacaacaaactgatcaaaaggaaaaagctcaacacaacgagacccacttccttcaaacaccctaaacaccttaacaaccctaaaaaccacaa 613  Q
    ||||||| |||  ||| ||||||||| |||| |||||||| ||||| || ||| ||||||||||||| |||| ||| |||| ||||| |||||    
T  33434948 aaacaaccaacctatcgaaaggaaaaggctcgacacaacgggacccgctccctccaaacaccctaaatacctaaaccacccaaaaaagcacaa 33434856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 423 - 483
Target Start/End: Complemental strand, 33435042 - 33434982
Alignment:
Q  423 ctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaa 483  Q
    |||||| | |||| ||||||| ||||||||||||| ||||||||||  |||||||||||||    
T  33435042 ctagacccggactaccgatctcgaagcaaaagtaatcggcccaccggaaaccaacacacaa 33434982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 366
Target Start/End: Original strand, 27993571 - 27993602
Alignment:
Q  335 ccgatctcgaatcaaaagtgatcggtccacca 366  Q
    ||||||||||||||||||||||||||||||||    
T  27993571 ccgatctcgaatcaaaagtgatcggtccacca 27993602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 483
Target Start/End: Original strand, 3419799 - 3419865
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaa 483  Q
    |||||||||||| |||||||||||||| ||||| |||  ||||||| | |||| ||||| |||||||    
T  3419799 ttgcagctagaccccgactcccgatctcgaagccaaatgaaccggctcgccgaaaaccagcacacaa 3419865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 425 - 495
Target Start/End: Complemental strand, 12480818 - 12480749
Alignment:
Q  425 agacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgacaa 495  Q
    |||||||  |||||||||| ||||||||| ||| ||||||||| ||| ||||||||||||| ||| |||||    
T  12480818 agacaccagctcccgatctcgaagcaaaa-taatcggcccaccaacatccaacacacaaaaggtaagacaa 12480749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 336 - 366
Target Start/End: Complemental strand, 25153265 - 25153235
Alignment:
Q  336 cgatctcgaatcaaaagtgatcggtccacca 366  Q
    |||||||||||||||||||||||||||||||    
T  25153265 cgatctcgaatcaaaagtgatcggtccacca 25153235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 320 - 398
Target Start/End: Original strand, 35745847 - 35745925
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    |||||||  ||||| ||||||||||||||||||||||| | ||| || ||||||| || |||| || | ||||||||||    
T  35745847 ccaaagagatgacttccgatctcgaatcaaaagtgatcagcccatcagactttagaacaaaattagtagggcacccctc 35745925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 483
Target Start/End: Original strand, 47326028 - 47326094
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaa 483  Q
    |||| ||||||| |||||||||||||| ||||| |||  |||||||||| ||| ||||| |||||||    
T  47326028 ttgctgctagaccccgactcccgatctcgaagccaaatgaaccggcccatcgaaaaccagcacacaa 47326094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 290
Target Start/End: Complemental strand, 3478532 - 3478443
Alignment:
Q  201 caacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaa 290  Q
    ||||||||||||| ||||   || |||||| ||  ||| ||||||||| ||| ||||| ||||||||||| ||| ||| |||||||||||    
T  3478532 caacaccaaagcttagccaactcagaaaagttcacatccgaaagatcattcagcttccgccacctctcgatctccgatccaccgaaagaa 3478443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 382
Target Start/End: Complemental strand, 3867176 - 3867115
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaat 382  Q
    ||||||| ||||| ||| ||||||||||||||||||| | |||||| | ||||| |||||||    
T  3867176 caaagaactgactcccggtctcgaatcaaaagtgatcagcccaccatattttagtaccaaat 3867115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 466
Target Start/End: Original strand, 11379273 - 11379318
Alignment:
Q  421 agctagacaccgactcccgatcttgaagcaaaagtaaccggcccac 466  Q
    ||||||||||| ||||||||||||||| ||||| |||||| |||||    
T  11379273 agctagacaccaactcccgatcttgaatcaaaaataaccgacccac 11379318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 398
Target Start/End: Complemental strand, 37795049 - 37794972
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    ||||||| ||||| ||||||||||||||||| ||| ||| |||||| ||| ||  ||||||| || | ||||||||||    
T  37795049 caaagaactgactcccgatctcgaatcaaaactgaacggcccaccatactatattaccaaattagcagggcacccctc 37794972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 393
Target Start/End: Original strand, 46133302 - 46133371
Alignment:
Q  324 agaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcac 393  Q
    |||| ||||| |||||||| ||||||||| ||||||  ||||| |||| || |||||||||||| |||||    
T  46133302 agaactgactcccgatctcaaatcaaaagcgatcggctcaccagacttcagcaccaaatcagaagggcac 46133371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 469
Target Start/End: Complemental strand, 3867050 - 3867002
Alignment:
Q  421 agctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccga 469  Q
    |||||||| ||||||| |||||| ||||||||||||| || ||||||||    
T  3867050 agctagaccccgactctcgatctcgaagcaaaagtaatcgacccaccga 3867002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 320 - 396
Target Start/End: Original strand, 11379147 - 11379223
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccc 396  Q
    |||||| | ||||| |||||||||||||||||| ||||||  ||||| |||  | |||||||| |||| ||||||||    
T  11379147 ccaaagtactgactcccgatctcgaatcaaaagcgatcggctcaccagactacatgaccaaattagaagggcacccc 11379223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 3e-37; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 417 - 607
Target Start/End: Original strand, 37770783 - 37770971
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgacaa-cgacgtgatatatatgcggt 515  Q
    |||| |||||||||| ||||||||||| ||||||||||||||||||||||||| ||||| || |||||||| ||||||| ||||  ||||||    ||||    
T  37770783 ttgctgctagacaccaactcccgatctcgaagcaaaagtaaccggcccaccgataaccagcaaacaaaaagcatgacaaacgacaagatata----cggt 37770878  T
Q  516 cgtgcaaacaacaaactgatcaaaaggaaaaagctcaacacaacgagacccacttccttcaaacaccct-aaacaccttaacaaccctaaaaa 607  Q
     ||||||||||| ||   ||||||||||| ||||||||||||||  |||||| ||||| |||||||||| ||||||||||||||||| |||||    
T  37770879 ggtgcaaacaacgaataaatcaaaaggaagaagctcaacacaacatgacccatttcctccaaacaccctaaaacaccttaacaaccccaaaaa 37770971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 202 - 403
Target Start/End: Original strand, 37770544 - 37770744
Alignment:
Q  202 aacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccatnnnnnn 301  Q
    ||||||||||| ||||| | || ||||||||| |||||||||||||| ||| |||||| |||||||||||||| ||||||||||||||||||||          
T  37770544 aacaccaaagccgagccacctcagaaaagctcatatctgaaagatcattcagcttccaacacctctcgacctccgattcaccgaaagaaaccataaaagc 37770643  T
Q  302 nnnnnnnnnnnnnctgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcacc 401  Q
                  ||||| |||||||||||| | ||||  ||||||||||||||||| ||||||||| ||||||||||||||||  |||||||||||||    
T  37770644 ccaaaaccaaaat-tgatctaaagaattgactcctgatccagaatcaaaagtgatcggcccaccaaaccttaggaccaaatcagatgggcacccctcacc 37770742  T
Q  402 ct 403  Q
    ||    
T  37770743 ct 37770744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 201 - 290
Target Start/End: Original strand, 10173478 - 10173567
Alignment:
Q  201 caacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaa 290  Q
    |||||||||||||||||| |||||||||||||| |||   |||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  10173478 caacaccaaagctgagccacatccgaaaagctcatattcaaaagatcattcaacttccaccacctctcgacctccgattcaccgaaagaa 10173567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 201 - 401
Target Start/End: Complemental strand, 1269664 - 1269463
Alignment:
Q  201 caacaccaaagctgagccgcatccgaaaagctcctatctgaaa-gatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccatnnnn 299  Q
    |||||||||||| ||||| ||| ||||||||||||||| |||| ||| | ||| ||||||||| ||||||||||| ||| ||| ||||||||||||        
T  1269664 caacaccaaagcagagccacattcgaaaagctcctatccgaaaagattattcagcttccaccaactctcgacctccgatccactgaaagaaaccataaaa 1269565  T
Q  300 nnnnnnnnnnnnnnnctgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctca 399  Q
                    ||| |||||||| ||||| ||||||||||||||||||||||||| |||||| |||||||||| ||||||||| |||||||||||    
T  1269564 atcccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggactaaatcagaagggcacccctca 1269465  T
Q  400 cc 401  Q
    ||    
T  1269464 cc 1269463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 202 - 294
Target Start/End: Complemental strand, 34230380 - 34230288
Alignment:
Q  202 aacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaacca 294  Q
    |||||||||| |||||| |||| ||||||||| ||| |||||||||| ||| ||||||||||||||| ||||| ||| |||||||||||||||    
T  34230380 aacaccaaagttgagccacatctgaaaagctcttatttgaaagatcattcagcttccaccacctctcaacctccgatccaccgaaagaaacca 34230288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 315 - 403
Target Start/End: Original strand, 14106539 - 14106627
Alignment:
Q  315 ctgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccct 403  Q
    |||||| |||||  ||||| ||||||| ||||||||||||||||| |||||| |||||||||||||||||| | |||||||||| ||||    
T  14106539 ctgatctaaagagctgactcccgatcttgaatcaaaagtgatcggcccaccagactttaggaccaaatcagcagggcacccctcgccct 14106627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 418 - 633
Target Start/End: Complemental strand, 1269420 - 1269208
Alignment:
Q  418 tgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgac-aacgacgtgatatatatgcggtc 516  Q
    |||||||||||| ||||||||||||| ||||||||| |||||| |||| ||  ||||| || ||||| |||| ||| |||||| ||||| ||    |||     
T  1269420 tgcagctagacatcgactcccgatctcgaagcaaaattaaccgacccatcgggaaccagcatacaaacagtaagacaaacgacatgatagat----ggtg 1269325  T
Q  517 gtgcaaacaacaaactgatcaaaaggaaaaagctcaacacaacgagacccacttccttcaaacaccctaaacaccttaacaaccctaaaaaccacaacaa 616  Q
    |||||||||||||||  ||| ||||||||| ||| | | ||| |||| |  || ||| |||||||| ||||||| |||||||||| ||||||   |||||    
T  1269324 gtgcaaacaacaaacatatccaaaggaaaaggcttagctcaatgagatcggctccctccaaacaccataaacactttaacaaccccaaaaacgcaaacaa 1269225  T
Q  617 gagttactgactacgaa 633  Q
    ||| || |||| |||||    
T  1269224 gagctagtgacgacgaa 1269208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 421 - 607
Target Start/End: Original strand, 41086932 - 41087115
Alignment:
Q  421 agctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgacaacgacgtgatatatatgcggtcgtgc 520  Q
    |||| |||||||| |||||||||  |||||||||||| ||| ||||||  ||||  ||||||| ||||| |||||  |||  | | ||| ||||| ||||    
T  41086932 agctggacaccgattcccgatctcaaagcaaaagtaatcggtccaccggaaacctgcacacaacaagtaggacaa--acgaca-agataagcggtagtgc 41087028  T
Q  521 aaacaacaaactgatcaaaaggaaaaagctcaacacaacgagacccacttccttcaaacaccctaaacaccttaacaaccctaaaaa 607  Q
    || |||||||| |||||| ||||||| ||| | | ||||| ||||| || ||| ||||||||||| ||||||||||||||| |||||    
T  41087029 aagcaacaaacagatcaataggaaaaggcttagctcaacgggacccgctacctccaaacaccctagacaccttaacaaccccaaaaa 41087115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 419 - 485
Target Start/End: Original strand, 22885276 - 22885342
Alignment:
Q  419 gcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaa 485  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||  || |||||||||||||    
T  22885276 gcagctagacaccaactcccgatctcgaagcaaaagtaaccggcccaccagcatccaacacacaaaa 22885342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 201 - 290
Target Start/End: Original strand, 16952283 - 16952372
Alignment:
Q  201 caacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaa 290  Q
    ||||||||||| ||| || ||||||||||||||||||| ||||||||  | | ||||||||||||||| ||||| ||| |||||||||||    
T  16952283 caacaccaaagttgatccacatccgaaaagctcctatccgaaagatcgtttagcttccaccacctctcaacctccgatccaccgaaagaa 16952372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 201 - 290
Target Start/End: Original strand, 17022948 - 17023037
Alignment:
Q  201 caacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaa 290  Q
    ||||||||||| ||| || ||||||||||||||||||| ||||||||  | | ||||||||||||||| ||||| ||| |||||||||||    
T  17022948 caacaccaaagttgatccacatccgaaaagctcctatccgaaagatcgtttagcttccaccacctctcaacctccgatccaccgaaagaa 17023037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 201 - 290
Target Start/End: Original strand, 17060254 - 17060343
Alignment:
Q  201 caacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaa 290  Q
    ||||||||||| ||| || ||||||||||||||||||| ||||||||  | | ||||||||||||||| ||||| ||| |||||||||||    
T  17060254 caacaccaaagttgatccacatccgaaaagctcctatccgaaagatcgtttagcttccaccacctctcaacctccgatccaccgaaagaa 17060343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 7696141 - 7696050
Alignment:
Q  202 aacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaacc 293  Q
    |||||||||| |||||| |||||  ||| |||||||| ||||||||| ||| ||||||||||||| ||||||  ||| ||||||||||||||    
T  7696141 aacaccaaagttgagccacatcctcaaatctcctatccgaaagatcattcagcttccaccacctcccgaccttcgatccaccgaaagaaacc 7696050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 220 - 295
Target Start/End: Original strand, 41086717 - 41086792
Alignment:
Q  220 catccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccat 295  Q
    ||||| |||||||| |||| ||||||||| ||| ||||||||||||||||||||| ||| ||||||||| ||||||    
T  41086717 catccaaaaagctcttatccgaaagatcattcagcttccaccacctctcgacctccgatccaccgaaaggaaccat 41086792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 417 - 483
Target Start/End: Original strand, 14106666 - 14106732
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaa 483  Q
    |||||||||| |||||||||||  ||| ||||||||||||||||||||||||  |||||||||||||    
T  14106666 ttgcagctagtcaccgactccctgtctcgaagcaaaagtaaccggcccaccggaaaccaacacacaa 14106732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 321 - 398
Target Start/End: Complemental strand, 387233 - 387156
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    ||||||||||||| |||||||| |||||||||||||| | |||||| ||||||| ||||||| || | ||||||||||    
T  387233 caaagaattgactcccgatctcaaatcaaaagtgatcagcccaccagactttagtaccaaattagcagggcacccctc 387156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 9560823 - 9560887
Alignment:
Q  335 ccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctca 399  Q
    |||||||||||||||||||||||||||||||||||||| |   |||||||  |||||||||||||    
T  9560823 ccgatctcgaatcaaaagtgatcggtccaccaaactttcgacacaaatcatcaaggcacccctca 9560887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 14106421 - 14106509
Alignment:
Q  201 caacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaaga 289  Q
    ||||||| |||||||||| ||| || ||||||| || | ||| |||||  |||||||||| ||||||||||||||||| ||||||||||    
T  14106421 caacacccaagctgagccacattcgtaaagctcttaaccgaatgatcatacaacttccacaacctctcgacctctgatccaccgaaaga 14106509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 320 - 384
Target Start/End: Complemental strand, 14405259 - 14405195
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatca 384  Q
    |||||||  ||||| ||||||||||||||||||||||||| |||||| ||||||| |||||||||    
T  14405259 ccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatca 14405195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 55 - 145
Target Start/End: Original strand, 41113460 - 41113547
Alignment:
Q  55 ggaacacccgaaaataaatactataaaaaacacccatgatgataacacccaccaaaatatacgttaccacctaaaacatactcctacacga 145  Q
    |||||| ||||||||||||||  |||||||||||||||| |    |||||||||||||| ||||||| |||||||||| |||||| |||||    
T  41113460 ggaacatccgaaaataaataccctaaaaaacacccatgaggg---cacccaccaaaataaacgttactacctaaaacagactccttcacga 41113547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 329 - 395
Target Start/End: Complemental strand, 7874343 - 7874277
Alignment:
Q  329 tgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcaccc 395  Q
    ||||| ||||||||||||||||||||||||  |||||| ||||||| |||||||||| | |||||||    
T  7874343 tgactcccgatctcgaatcaaaagtgatcgacccaccagactttagaaccaaatcagcagggcaccc 7874277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 511 - 608
Target Start/End: Complemental strand, 7695916 - 7695819
Alignment:
Q  511 gcggtcgtgcaaacaacaaactgatcaaaaggaaaaagctcaacacaacgagacccacttccttcaaacaccctaaacaccttaacaaccctaaaaac 608  Q
    ||||| |||||||||||||||  ||||||||||||| ||||||||||| |  |  | |||| |  ||||| |||||||||||||||||||| ||||||    
T  7695916 gcggtggtgcaaacaacaaacatatcaaaaggaaaaggctcaacacaaaggaattcgcttcttctaaacagcctaaacaccttaacaacccaaaaaac 7695819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 320 - 381
Target Start/End: Original strand, 22885153 - 22885214
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaa 381  Q
    |||||||| ||||| ||||||||||||||||||||||||| |||||| |||| |||| ||||    
T  22885153 ccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagacttcaggatcaaa 22885214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 419 - 464
Target Start/End: Complemental strand, 29487069 - 29487024
Alignment:
Q  419 gcagctagacaccgactcccgatcttgaagcaaaagtaaccggccc 464  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  29487069 gcagctagacaccaactcccgatctcgaagcaaaagtaaccggccc 29487024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 321 - 398
Target Start/End: Original strand, 39338886 - 39338963
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    ||||||| ||||| |||||||||||||||||| |||||| |||||| ||| ||| ||||||| || | ||||||||||    
T  39338886 caaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagactatagtaccaaattagcagggcacccctc 39338963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 402
Target Start/End: Complemental strand, 23650444 - 23650364
Alignment:
Q  322 aaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccc 402  Q
    |||||| ||||| |||||||||||||||||| |||| | |||||| ||| ||| ||||||| || |||| |||||||||||    
T  23650444 aaagaaatgactcccgatctcgaatcaaaagcgatcagcccaccagactctagaaccaaataagtaaggtacccctcaccc 23650364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 424 - 467
Target Start/End: Complemental strand, 4471856 - 4471813
Alignment:
Q  424 tagacaccgactcccgatcttgaagcaaaagtaaccggcccacc 467  Q
    ||||| || |||||||||||||||||||||||||||||||||||    
T  4471856 tagacgccaactcccgatcttgaagcaaaagtaaccggcccacc 4471813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 417 - 468
Target Start/End: Complemental strand, 7874231 - 7874180
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccg 468  Q
    ||||||||||||||| ||||||||||| |||||||||  |||||||||||||    
T  7874231 ttgcagctagacaccaactcccgatctcgaagcaaaaaaaaccggcccaccg 7874180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 417 - 546
Target Start/End: Original strand, 10173721 - 10173848
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgac--aacgacgtgatatatatgcgg 514  Q
    ||||||||||||||||||| ||||||  ||| ||||||||||| || |||||  |||||| |||||| || || |||  |||||| ||    ||||||||    
T  10173721 ttgcagctagacaccgacttccgatcccgaaacaaaagtaaccagcacaccggaaaccaatacacaataaataagacaaaacgacatg----atatgcgg 10173816  T
Q  515 tcgtgcaaacaacaaactgatcaaaaggaaaa 546  Q
    | |||||||| ||||||  |||||||||||||    
T  10173817 tggtgcaaaccacaaacaaatcaaaaggaaaa 10173848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 327 - 382
Target Start/End: Complemental strand, 10524151 - 10524096
Alignment:
Q  327 attgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaat 382  Q
    ||||||| ||||||||||||||||||||||||| |||||| ||| ||| |||||||    
T  10524151 attgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaat 10524096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 321 - 396
Target Start/End: Complemental strand, 13337334 - 13337259
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccc 396  Q
    ||||||| ||||| ||||| ||||||||||||||||||| ||| || |||||| |  |||||||||| ||||||||    
T  13337334 caaagaactgacttccgatttcgaatcaaaagtgatcggcccatcagactttaaggtcaaatcagaagggcacccc 13337259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 228 - 295
Target Start/End: Complemental strand, 13337427 - 13337360
Alignment:
Q  228 aagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccat 295  Q
    ||||||||||||||||||||| |||   | |||||||||||||||||  || ||||||||||||||||    
T  13337427 aagctcctatctgaaagatcattcagtgttcaccacctctcgacctcctatccaccgaaagaaaccat 13337360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 243 - 290
Target Start/End: Original strand, 22885076 - 22885123
Alignment:
Q  243 agatcaatcaacttccaccacctctcgacctctgattcaccgaaagaa 290  Q
    |||||||||||||||||||||||||| ||||||| | |||||||||||    
T  22885076 agatcaatcaacttccaccacctctcaacctctggtccaccgaaagaa 22885123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 243 - 290
Target Start/End: Original strand, 33788575 - 33788622
Alignment:
Q  243 agatcaatcaacttccaccacctctcgacctctgattcaccgaaagaa 290  Q
    |||||||||| ||||||||||||||| ||||||| |||||||||||||    
T  33788575 agatcaatcagcttccaccacctctcaacctctggttcaccgaaagaa 33788622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 10173609 - 10173659
Alignment:
Q  331 actgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaa 381  Q
    ||| ||||||||||||||||||||||||| |||| | ||||||||||||||    
T  10173609 acttccgatctcgaatcaaaagtgatcggcccactagactttaggaccaaa 10173659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 378
Target Start/End: Complemental strand, 16960043 - 16959985
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggacc 378  Q
    |||||||| |||||  ||||||||||||||||| |||||| |||||| |||||||||||    
T  16960043 ccaaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagactttaggacc 16959985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 397
Target Start/End: Original strand, 25504924 - 25505006
Alignment:
Q  315 ctgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccct 397  Q
    |||| |||||||| ||||| |||||||||||| ||||| ||| ||||||||| |||  | |||||||||| || |||||||||    
T  25504924 ctgaaccaaagaactgactcccgatctcgaattaaaagcgataggtccaccagactgcaagaccaaatcataagggcacccct 25505006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 145
Target Start/End: Original strand, 37770370 - 37770458
Alignment:
Q  55 ggaacacccgaaaataaatactataaaaaacacccatgatgataacacccaccaaaatatacgttaccacctaaaacatactcctacacga 145  Q
    |||||||||||||||||| ||  |||||| |||| |||| |||| |||||||||||||  |||| ||||||||||||| |||||| |||||    
T  37770370 ggaacacccgaaaataaacaccctaaaaa-cacc-atgaggataccacccaccaaaatccacgtcaccacctaaaacagactccttcacga 37770458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 483
Target Start/End: Original strand, 39339008 - 39339074
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaa 483  Q
    |||||||||||| |||||||||||||| ||||| |||  ||| |||||||||| ||||| |||||||    
T  39339008 ttgcagctagaccccgactcccgatctcgaagccaaatgaactggcccaccgaaaaccagcacacaa 39339074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 418 - 467
Target Start/End: Complemental strand, 2062846 - 2062797
Alignment:
Q  418 tgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccacc 467  Q
    |||||||||||||| ||||||||||| |||||||||||||  ||||||||    
T  2062846 tgcagctagacaccaactcccgatctcgaagcaaaagtaattggcccacc 2062797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 417 - 597
Target Start/End: Complemental strand, 17105350 - 17105173
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatga-caacgacgtgatatatatgcggt 515  Q
    |||||||||||| ||||||||  ||||  ||||||||||||||| |||||||  ||||| ||||||| | ||| ||  || ||| ||    ||||| | |    
T  17105350 ttgcagctagacgccgactccttatctccaagcaaaagtaaccgacccaccggaaaccagcacacaatatgtaagatgaaagacatg----atatgagat 17105255  T
Q  516 cgtgcaaacaacaaactgatcaaaaggaaaaagctcaacacaacgagacccacttccttcaaacaccctaaacaccttaaca 597  Q
     ||||||||| |||||  ||||||||||||| ||||| ||||||| |||   |  |||  ||||||||||||||||||||||    
T  17105254 ggtgcaaacaccaaacaaatcaaaaggaaaaggctcatcacaacgggacaagcaccctctaaacaccctaaacaccttaaca 17105173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 316 - 384
Target Start/End: Complemental strand, 34230266 - 34230198
Alignment:
Q  316 tgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatca 384  Q
    |||||||||||| ||||| | |||||||||| |||| ||||||| ||| ||||||||| || |||||||    
T  34230266 tgatccaaagaactgactcctgatctcgaataaaaaatgatcggcccatcaaactttacgatcaaatca 34230198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 402
Target Start/End: Complemental strand, 17105457 - 17105390
Alignment:
Q  336 cgatctcgaatcaaaa-gtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccc 402  Q
    |||||||||||||||| |||||||| ||| || |||| || |||||||||| | ||||||||||||||    
T  17105457 cgatctcgaatcaaaaagtgatcggcccatcagacttcagtaccaaatcagtagggcacccctcaccc 17105390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 399
Target Start/End: Complemental strand, 8520446 - 8520384
Alignment:
Q  337 gatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctca 399  Q
    |||||||||||||||||||| |||||| || ||| ||| | |||||||  |||||||||||||    
T  8520446 gatctcgaatcaaaagtgattggtccatcagactctagaaacaaatcactaaggcacccctca 8520384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 13699051 - 13699105
Alignment:
Q  83 aacacccatgatgataacacccaccaaaatatacgttaccacctaaaacatactc 137  Q
    ||||||| ||| ||||||||||||||||||| || | ||||||||||||| ||||    
T  13699051 aacacccctgaagataacacccaccaaaataaacatcaccacctaaaacacactc 13699105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 320 - 378
Target Start/End: Original strand, 15126430 - 15126488
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggacc 378  Q
    ||||||||  |||| ||||||||||||||||| ||||||| |||||| |||| ||||||    
T  15126430 ccaaagaaccgactcccgatctcgaatcaaaaatgatcggcccaccagacttcaggacc 15126488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 395
Target Start/End: Original strand, 41086825 - 41086883
Alignment:
Q  337 gatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcaccc 395  Q
    |||||||||||||||||||| |  |||||| ||| || ||||||||||||| |||||||    
T  41086825 gatctcgaatcaaaagtgattgacccaccagactatatgaccaaatcagaagggcaccc 41086883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 467
Target Start/End: Complemental strand, 3745298 - 3745249
Alignment:
Q  418 tgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccacc 467  Q
    ||||||||||| || |||||||||||  ||| ||||||||||||||||||    
T  3745298 tgcagctagacgccaactcccgatctcaaagtaaaagtaaccggcccacc 3745249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 386
Target Start/End: Complemental strand, 4471983 - 4471918
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcaga 386  Q
    ||||||| ||||| |||||||||||||||| | |||||| |||||| |||  ||||||||| ||||    
T  4471983 caaagaactgactcccgatctcgaatcaaaggcgatcggcccaccagactccaggaccaaaccaga 4471918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 145
Target Start/End: Complemental strand, 4975105 - 4975016
Alignment:
Q  56 gaacacccgaaaataaatactataaaaaacacccatgatgataacacccaccaaaatatacgttaccacctaaaacatactcctacacga 145  Q
    ||||||||||||||||| ||  | ||||||| || ||| |||||||||||||||| || ||   ||||||||||||| ||| || |||||    
T  4975105 gaacacccgaaaataaacaccctgaaaaacatccttgaggataacacccaccaaattacacaccaccacctaaaacagacttcttcacga 4975016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 145
Target Start/End: Complemental strand, 4993013 - 4992924
Alignment:
Q  56 gaacacccgaaaataaatactataaaaaacacccatgatgataacacccaccaaaatatacgttaccacctaaaacatactcctacacga 145  Q
    ||||||||||||||||| ||  | ||||||| || ||| |||||||||||||||| || ||   ||||||||||||| ||| || |||||    
T  4993013 gaacacccgaaaataaacaccctgaaaaacatccttgaggataacacccaccaaattacacaccaccacctaaaacagacttcttcacga 4992924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 467
Target Start/End: Original strand, 15126546 - 15126595
Alignment:
Q  418 tgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccacc 467  Q
    ||||||||||| || ||||||||||| |||||||||||||| | ||||||    
T  15126546 tgcagctagacgccaactcccgatctcgaagcaaaagtaactgacccacc 15126595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 376
Target Start/End: Original strand, 33788647 - 33788708
Alignment:
Q  315 ctgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttagga 376  Q
    |||| |||||||| ||||| || ||||||||||||||| |||||| |||||| |||| ||||    
T  33788647 ctgaaccaaagaactgactcccaatctcgaatcaaaagcgatcggcccaccagacttcagga 33788708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 467
Target Start/End: Original strand, 30967270 - 30967314
Alignment:
Q  423 ctagacaccgactcccgatcttgaagcaaaagtaaccggcccacc 467  Q
    ||||||||| |||| |||| |||||||||||| ||||||||||||    
T  30967270 ctagacaccaactctcgattttgaagcaaaagcaaccggcccacc 30967314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 5e-30; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 417 - 607
Target Start/End: Original strand, 20701945 - 20702132
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgacaacgacgtgatatatatgcggtc 516  Q
    ||||||||||||||||| |||||||||  |||||||||||||||||||| ||  ||||| ||||||||||||| |||||  ||   | | ||| |||||     
T  20701945 ttgcagctagacaccgaatcccgatctcaaagcaaaagtaaccggcccatcggaaaccatcacacaaaaagtaggacaa--acaaca-agatacgcggta 20702041  T
Q  517 gtgcaaacaacaaactgatcaaaaggaaaaagctcaacacaacgagacccacttccttcaaacaccctaaacaccttaacaaccctaaaaa 607  Q
    ||||||||||||||| ||||||| ||||||||  |  | ||||| ||||| |||||| |||||||||||||||||||||||| || |||||    
T  20702042 gtgcaaacaacaaacagatcaaacggaaaaagtaccgctcaacgggacccgcttcctccaaacaccctaaacaccttaacaatcccaaaaa 20702132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 419 - 606
Target Start/End: Original strand, 3880727 - 3880912
Alignment:
Q  419 gcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgac-aacgacgtgatatatatgcggtcg 517  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||||  ||||| || ||||||||| |||| || ||| ||    ||||| ||| |    
T  3880727 gcagctagacaccgactcccgatctcaaagcaaaagtaactggcccaccggaaaccagcaaacaaaaagtctgacaaaggacatg----atatgtggtgg 3880822  T
Q  518 tgcaaacaacaaactgatcaaaaggaaaaagctcaacacaacgagacccacttccttc-aaacaccctaaacaccttaacaaccctaaaa 606  Q
    |||||||||||||   ||||||||||||||||||||| ||||  ||||| |||| | | |||||||||||||| ||||||| ||| ||||    
T  3880823 tgcaaacaacaaatatatcaaaaggaaaaagctcaactcaacaggacccgcttcttccaaaacaccctaaacatcttaacagccccaaaa 3880912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 3880500 - 3880593
Alignment:
Q  202 aacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccat 295  Q
    ||||||||||||||||| ||||| |||||||| |||| ||||||| | ||||||||||||||| ||||||||| ||| ||| ||||||||||||    
T  3880500 aacaccaaagctgagccacatccaaaaagctcatatccgaaagattattcaacttccaccaccactcgacctccgatccacggaaagaaaccat 3880593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 20701705 - 20701798
Alignment:
Q  202 aacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccat 295  Q
    |||| ||||| |||||| ||| ||||||||||||||| ||||||||| ||| ||||||| ||||||||||||| ||| ||||||||||||||||    
T  20701705 aacaacaaagttgagccacattcgaaaagctcctatccgaaagatcattcagcttccactacctctcgacctccgatccaccgaaagaaaccat 20701798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 340 - 403
Target Start/End: Original strand, 3880623 - 3880686
Alignment:
Q  340 ctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccct 403  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  3880623 ctcgaatcaaaagtgatcggcccaccaaactttaggaccaaatcagaagggcacctctcaccct 3880686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 417 - 483
Target Start/End: Original strand, 15132664 - 15132730
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaa 483  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||    
T  15132664 ttgcagctagtcaccgactcccgatctcgaagcaaaagtaaccggcccaccgaaaaccatcacacaa 15132730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 323 - 402
Target Start/End: Original strand, 32935362 - 32935441
Alignment:
Q  323 aagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccc 402  Q
    ||||| ||||| |||||||||||||||||| |||||| |||||| |||| ||||||||||||||| || |||||||||||    
T  32935362 aagaactgactcccgatctcgaatcaaaagcgatcggcccaccagacttcaggaccaaatcagaagggaacccctcaccc 32935441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 417 - 475
Target Start/End: Original strand, 16510444 - 16510502
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaacca 475  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||| ||| |||||    
T  16510444 ttgcagctagaccccgactcccgatctcgaagcaaaagtaaccggcccaacgaaaacca 16510502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 323 - 387
Target Start/End: Original strand, 26534742 - 26534806
Alignment:
Q  323 aagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaa 387  Q
    ||||| ||||| || |||||||||||||||||||||| |||||| |||| |||||||||||||||    
T  26534742 aagaactgactcccaatctcgaatcaaaagtgatcggcccaccagacttcaggaccaaatcagaa 26534806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 320 - 402
Target Start/End: Original strand, 20701823 - 20701905
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccc 402  Q
    |||||||| | ||| |||||||||||||||||||||||||  |||||  ||  | ||||||||||||| ||||||||||||||    
T  20701823 ccaaagaactaactcccgatctcgaatcaaaagtgatcggcacaccagtctaaatgaccaaatcagaagggcacccctcaccc 20701905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 329 - 395
Target Start/End: Complemental strand, 34105465 - 34105399
Alignment:
Q  329 tgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcaccc 395  Q
    ||||| ||||||||||||||||||||||||| |||||||||| ||| | |||||||  |||||||||    
T  34105465 tgactcccgatctcgaatcaaaagtgatcggcccaccaaactctagaaacaaatcactaaggcaccc 34105399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 315 - 380
Target Start/End: Complemental strand, 9224107 - 9224042
Alignment:
Q  315 ctgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaa 380  Q
    |||| |||||||| ||||| |||||||||||||||||| |||| | |||||| |||||||||||||    
T  9224107 ctgaaccaaagaactgactcccgatctcgaatcaaaagcgatcagcccaccagactttaggaccaa 9224042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 323 - 394
Target Start/End: Original strand, 26216042 - 26216112
Alignment:
Q  323 aagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacc 394  Q
    ||||| ||||| ||||||||||||||||||||||||| |||||| || |||| | |||||||||| ||||||    
T  26216042 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 26216112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 425 - 495
Target Start/End: Complemental strand, 9223972 - 9223903
Alignment:
Q  425 agacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgacaa 495  Q
    ||||||| ||||||||||| ||||||||| |||||||||||||  || ||| ||||||||||||| |||||    
T  9223972 agacaccaactcccgatctcgaagcaaaa-taaccggcccaccagcatccatcacacaaaaagtaagacaa 9223903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 295
Target Start/End: Original strand, 15120538 - 15120592
Alignment:
Q  241 aaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccat 295  Q
    ||||||||| || ||||||||||||||||||||| ||| |||| |||||||||||    
T  15120538 aaagatcaaccagcttccaccacctctcgacctccgatccaccaaaagaaaccat 15120592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 335 - 384
Target Start/End: Complemental strand, 21266159 - 21266110
Alignment:
Q  335 ccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatca 384  Q
    |||||||||||||||||| |||||| ||||||  ||||||||||||||||    
T  21266159 ccgatctcgaatcaaaagcgatcggcccaccagtctttaggaccaaatca 21266110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 366
Target Start/End: Original strand, 7546464 - 7546495
Alignment:
Q  335 ccgatctcgaatcaaaagtgatcggtccacca 366  Q
    ||||||||||||||||||||||||||||||||    
T  7546464 ccgatctcgaatcaaaagtgatcggtccacca 7546495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 465
Target Start/End: Original strand, 13098706 - 13098753
Alignment:
Q  418 tgcagctagacaccgactcccgatcttgaagcaaaagtaaccggccca 465  Q
    ||||||||||| || |||||| |||| |||||||||||||||||||||    
T  13098706 tgcagctagacgccaactcccaatctcgaagcaaaagtaaccggccca 13098753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 467
Target Start/End: Complemental strand, 15943951 - 15943908
Alignment:
Q  424 tagacaccgactcccgatcttgaagcaaaagtaaccggcccacc 467  Q
    ||||| || ||||||||||||||||||||| |||||||||||||    
T  15943951 tagactccaactcccgatcttgaagcaaaattaaccggcccacc 15943908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 397
Target Start/End: Original strand, 16510339 - 16510398
Alignment:
Q  338 atctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccct 397  Q
    |||||||||||||||||||||| |||| | ||||||| ||||||| || | |||||||||    
T  16510339 atctcgaatcaaaagtgatcggcccactagactttagaaccaaattagcagggcacccct 16510398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 483
Target Start/End: Complemental strand, 3117430 - 3117364
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaa 483  Q
    ||||| |||||| ||||||||| |||| ||||| |||  ||||||||||| || |||||||||||||    
T  3117430 ttgcaactagaccccgactcccaatctcgaagccaaatgaaccggcccactgaaaaccaacacacaa 3117364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 17278249 - 17278311
Alignment:
Q  83 aacacccatgatgataacacccaccaaaatatacgttaccacctaaaacatactcctacacga 145  Q
    ||||||||||  || |||||||||||||||| || |||||||||||| || |||||| |||||    
T  17278249 aacacccatgcggacaacacccaccaaaataaacattaccacctaaatcagactccttcacga 17278311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 366
Target Start/End: Complemental strand, 3117553 - 3117508
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccacca 366  Q
    ||||||| ||||| ||||||| ||||||||||||||||| ||||||    
T  3117553 caaagaactgactcccgatcttgaatcaaaagtgatcggcccacca 3117508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 365
Target Start/End: Complemental strand, 13423511 - 13423482
Alignment:
Q  336 cgatctcgaatcaaaagtgatcggtccacc 365  Q
    ||||||||||||||||||||||||||||||    
T  13423511 cgatctcgaatcaaaagtgatcggtccacc 13423482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 323 - 402
Target Start/End: Complemental strand, 12794173 - 12794093
Alignment:
Q  323 aagaattgactgccgatctcgaatcaaaag-tgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccc 402  Q
    ||||| ||||| | |||||||||||||||| ||||||| |||| | ||||||| |||||| ||||| | ||||||| ||||    
T  12794173 aagaactgactcctgatctcgaatcaaaagttgatcggcccactagactttagaaccaaaacagaaggacaccccttaccc 12794093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 335 - 387
Target Start/End: Complemental strand, 20499965 - 20499913
Alignment:
Q  335 ccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaa 387  Q
    |||||||||||||||||| ||||||||||||| |||  || | ||||||||||    
T  20499965 ccgatctcgaatcaaaagcgatcggtccaccatactccagaatcaaatcagaa 20499913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 5e-30; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 320 - 403
Target Start/End: Original strand, 7392051 - 7392134
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccct 403  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  7392051 ccaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttaggaccaaatcagaagggcacccctcaccct 7392134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 415 - 607
Target Start/End: Original strand, 14302570 - 14302759
Alignment:
Q  415 gcttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgacaacgacgtgatatatatgcgg 514  Q
    |||||||||||||||| |||||||||||| |||||||||||||| || || ||   ||||| ||||||||||| |||||||  |||  ||| |||||  |    
T  14302570 gcttgcagctagacacggactcccgatctcgaagcaaaagtaacggggcccccagaaaccagcacacaaaaagaatgacaa--acgacata-atatgatg 14302666  T
Q  515 tcgtgcaaacaacaaactgatcaaaaggaaaaagctcaacacaacgagacccacttccttcaaacaccctaaacaccttaacaaccctaaaaa 607  Q
    | ||||||||||||||  |||||||| ||||| ||||||| ||||| ||||| |||||| |||||| | ||||||||| |||||||| |||||    
T  14302667 tggtgcaaacaacaaatagatcaaaacgaaaatgctcaactcaacgggacccgcttcctccaaacatcttaaacacctaaacaaccccaaaaa 14302759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 417 - 601
Target Start/End: Original strand, 7195380 - 7195563
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccac-cgacaaccaacacacaaaaagtatgacaacgacgtgatat-atatgcgg 514  Q
    |||||||||| |||||||||||||||| |||||||||||||| |||||||  || ||||||||||||||||||||||||   |  |||||| ||  ||||    
T  7195380 ttgcagctagccaccgactcccgatctcgaagcaaaagtaactggcccactggaaaaccaacacacaaaaagtatgaca---aaatgatatgatgagcgg 7195476  T
Q  515 tcgtgcaaacaacaaactgatcaaaaggaaaaagctcaacacaacgagacccacttccttcaaacaccctaaacaccttaacaaccc 601  Q
    | |||||||||||||||  || |||||||||| || || |||||   ||| | |||||| ||||||||||||||||||||| |||||    
T  7195477 tggtgcaaacaacaaacatataaaaaggaaaaggcccagcacaaaaggacacgcttcctccaaacaccctaaacaccttaataaccc 7195563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 202 - 295
Target Start/End: Complemental strand, 8297647 - 8297554
Alignment:
Q  202 aacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccat 295  Q
    ||||||||| | ||||| ||||||||||||||||||| |||||| || ||||||||||||||||| ||||||| ||||||||||||||||||||    
T  8297647 aacaccaaaaccgagccacatccgaaaagctcctatccgaaagaccattcaacttccaccacctcacgacctccgattcaccgaaagaaaccat 8297554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 55 - 151
Target Start/End: Complemental strand, 30097694 - 30097598
Alignment:
Q  55 ggaacacccgaaaataaatactataaaaaacacccatgatgataacacccaccaaaatatacgttaccacctaaaacatactcctacacgagaacaa 151  Q
    |||||||||||||||||| ||  ||||||||| ||||||||| |||||||||||||||| |||| ||||||||||||| |||||| ||||| |||||    
T  30097694 ggaacacccgaaaataaacaccctaaaaaacatccatgatgacaacacccaccaaaatacacgtcaccacctaaaacagactccttcacgaaaacaa 30097598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 205 - 403
Target Start/End: Original strand, 7195145 - 7195342
Alignment:
Q  205 accaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccatnnnnnnnnn 304  Q
    |||||||||||||| |||||| ||||||||||||  |||||| | ||| ||||||| ||||||||||||| ||| |||||||| |||||||             
T  7195145 accaaagctgagccacatccgcaaagctcctatccaaaagattattcagcttccacgacctctcgacctccgatccaccgaaaaaaaccataaaagccca 7195244  T
Q  305 nnnnnnnnnnctgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccct 403  Q
               ||| |||||||| ||||| |||||||||||||||||||||||||  ||||| |||||| | ||||||||||| |||||||||||||||    
T  7195245 aactctaact-tgagccaaagaactgactcccgatctcgaatcaaaagtgatcggctcaccagactttatggccaaatcagaagggcacccctcaccct 7195342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 320 - 401
Target Start/End: Original strand, 13954254 - 13954334
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcacc 401  Q
    |||||| | ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||    
T  13954254 ccaaagtaatgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcag-aaggcacccctcacc 13954334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 417 - 495
Target Start/End: Original strand, 13954375 - 13954453
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgacaa 495  Q
    ||||||||||||||||||||  ||||| ||||||||||||||||||||||||| ||||| || ||||||| ||||||||    
T  13954375 ttgcagctagacaccgactcttgatctcgaagcaaaagtaaccggcccaccgaaaaccagcatacaaaaattatgacaa 13954453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 200 - 295
Target Start/End: Original strand, 7391936 - 7392032
Alignment:
Q  200 ccaacaccaaagctgagccgcatccgaaaagctcctatctga-aagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccat 295  Q
    ||||||| ||||| ||||| |||||||||||||||||||  | ||||||||||  |||| |||||||||||||||| ||| ||||||||||||||||    
T  7391936 ccaacacgaaagcagagccacatccgaaaagctcctatccaataagatcaatccgcttcaaccacctctcgacctccgatccaccgaaagaaaccat 7392032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 319 - 403
Target Start/End: Original strand, 14302449 - 14302533
Alignment:
Q  319 tccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccct 403  Q
    ||||||||| ||||| || |||||||| ||||||||||| |||||||| |||||||||||||| ||||| |||| ||||||||||    
T  14302449 tccaaagaactgactcccaatctcgaaccaaaagtgatcagtccaccagactttaggaccaaaacagaagggcatccctcaccct 14302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 417 - 592
Target Start/End: Original strand, 26046106 - 26046278
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgac-aacgacgtgatatatatgcggt 515  Q
    |||||||||| |||||||||||| ||| ||||||||| ||| | |||||||   ||| | ||||||||||||||||| |||||| ||    |||||||||    
T  26046106 ttgcagctagccaccgactcccggtctcgaagcaaaattaatctgcccaccagaaactagcacacaaaaagtatgacaaacgacatg----atatgcggt 26046201  T
Q  516 cgtgcaaacaacaaactgatcaaaaggaaaaagctcaacacaacgagacccacttccttcaaacaccctaaacacct 592  Q
     |||||||||||||||  |||||||| | || |||||   ||||  ||||| ||||||  |||||||||||||||||    
T  26046202 ggtgcaaacaacaaacatatcaaaagaagaaggctcagtgcaacatgacccgcttcctctaaacaccctaaacacct 26046278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 397
Target Start/End: Original strand, 26045999 - 26046062
Alignment:
Q  335 ccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaa-tcagaaaggcacccct 397  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||| ||| ||||||||||||    
T  26045999 ccgatctcgaatcaaaagtgatcggttcaccagactttaggaccaaactcaaaaaggcacccct 26046062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 417 - 495
Target Start/End: Original strand, 7392173 - 7392251
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgacaa 495  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||| |    |||||||||||||||||| |||||    
T  7392173 ttgcagctagacaccaactcccgatctcgaagcaaaagtaaccggtccatcagataccaacacacaaaaagtaagacaa 7392251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 417 - 495
Target Start/End: Complemental strand, 8297407 - 8297329
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgacaa 495  Q
    ||||||||||||||| |||| |||||| ||||||||||||| |||||||| || ||||| | || ||||||||||||||    
T  8297407 ttgcagctagacaccaactctcgatctcgaagcaaaagtaatcggcccactgaaaaccagcgcagaaaaagtatgacaa 8297329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 321 - 398
Target Start/End: Complemental strand, 698421 - 698344
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    |||||| |||||| |||||||||||||||||| ||||||||||||| ||| ||| ||||||| || | ||||||||||    
T  698421 caaagagttgactcccgatctcgaatcaaaagagatcggtccaccagactatagcaccaaattagcagggcacccctc 698344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 33258784 - 33258877
Alignment:
Q  202 aacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccat 295  Q
    ||||||||||||||||| ||||| | ||||||||  |||| | |||| ||| ||||||| | ||||||||||| ||| ||||||||||||||||    
T  33258784 aacaccaaagctgagccacatccaacaagctcctccctgagaaatcattcagcttccactatctctcgacctccgatccaccgaaagaaaccat 33258877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 320 - 401
Target Start/End: Original strand, 33258902 - 33258983
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcacc 401  Q
    |||||||| | ||| | ||||||||||||||||||||||| |||||| ||||||| |||||| ||||| | |||||||||||    
T  33258902 ccaaagaactaactcctgatctcgaatcaaaagtgatcggcccaccagactttagcaccaaaacagaaggacacccctcacc 33258983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 321 - 382
Target Start/End: Complemental strand, 34378158 - 34378097
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaat 382  Q
    ||||||| ||||| ||||||||||||||||||||||||| |||||| ||||||| |||||||    
T  34378158 caaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttagtaccaaat 34378097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 320 - 396
Target Start/End: Original strand, 24072286 - 24072362
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccc 396  Q
    |||||||| ||||| |||||||| ||||||||| |||| | | |||| |||||||||||||||||||| ||||||||    
T  24072286 ccaaagaactgacttccgatctcaaatcaaaagcgatcagccaaccagactttaggaccaaatcagaagggcacccc 24072362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 320 - 403
Target Start/End: Complemental strand, 8297529 - 8297446
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccct 403  Q
    |||||||| ||||| ||||||||||||||||| | ||  | ||||||  |||||| |||||||||||| |||||||||||||||    
T  8297529 ccaaagaactgactcccgatctcgaatcaaaaattattagcccaccatgctttagaaccaaatcagaagggcacccctcaccct 8297446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 295
Target Start/End: Original strand, 21402761 - 21402832
Alignment:
Q  225 gaaaagctcctatctgaaa-gatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccat 295  Q
    |||||||||||| | |||| ||||||||||||||||||||||||| |||||  || ||||||||||||||||    
T  21402761 gaaaagctcctacccgaaaagatcaatcaacttccaccacctctcaacctccaatccaccgaaagaaaccat 21402832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 418 - 489
Target Start/End: Original strand, 22675456 - 22675527
Alignment:
Q  418 tgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagta 489  Q
    ||||||||||| || ||||||| ||| |||||||||||||||||||||||   | |||||||||||||||||    
T  22675456 tgcagctagacgccaactcccggtctcgaagcaaaagtaaccggcccaccagaatccaacacacaaaaagta 22675527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 320 - 395
Target Start/End: Original strand, 39024470 - 39024545
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcaccc 395  Q
    |||||||| ||||| |||||||||||||||||| ||| |  ||||||||||| |||||||| |||||| |||||||    
T  39024470 ccaaagaagtgactcccgatctcgaatcaaaagcgattgagccaccaaacttcaggaccaactcagaagggcaccc 39024545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 320 - 402
Target Start/End: Original strand, 17854087 - 17854169
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccc 402  Q
    ||||| |||||||| |||||||||| ||||||| | |||| |||||| |||| | |||||||| |||| ||||||||||||||    
T  17854087 ccaaataattgactcccgatctcgagtcaaaagcggtcggcccaccatacttcaagaccaaattagaagggcacccctcaccc 17854169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 26045866 - 26045959
Alignment:
Q  202 aacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccat 295  Q
    |||||||||| |||| | | |||||||||||| |||||||||||||||||| |||||||  |||  ||||||| ||| | |||| |||||||||    
T  26045866 aacaccaaagttgagtcacctccgaaaagctcatatctgaaagatcaatcagcttccacagcctaacgacctccgatcccccgagagaaaccat 26045959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 14302188 - 14302240
Alignment:
Q  80 aaaaacacccatgatgataacacccaccaaaatatacgttaccacctaaaaca 132  Q
    |||||||||| |||||| |||||||||||||||| |||| |||||||||||||    
T  14302188 aaaaacacccctgatgacaacacccaccaaaatacacgtcaccacctaaaaca 14302240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 235 - 295
Target Start/End: Original strand, 14302365 - 14302425
Alignment:
Q  235 tatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccat 295  Q
    |||| |||||||||  || ||||||||||||||||||||| ||| ||||||||||||||||    
T  14302365 tatccgaaagatcatgcagcttccaccacctctcgacctccgatccaccgaaagaaaccat 14302425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 26405447 - 26405515
Alignment:
Q  202 aacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcga 270  Q
    ||||||||||  ||||| | |||||||||||| |||| |||||| |||||| |||||||||||||||||    
T  26405447 aacaccaaagtcgagccacctccgaaaagctcatatccgaaagaccaatcagcttccaccacctctcga 26405515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 320 - 396
Target Start/End: Original strand, 39184207 - 39184283
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccc 396  Q
    |||||||| ||||| ||||||||||||||||||||||||| |||||| ||   | || |||||||||| ||||||||    
T  39184207 ccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagaccacatgatcaaatcagaagggcacccc 39184283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 323 - 386
Target Start/End: Complemental strand, 23426402 - 23426339
Alignment:
Q  323 aagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcaga 386  Q
    ||||| ||||| || ||||||||||||||||| ||||||||||| |||| ||||||||| ||||    
T  23426402 aagaactgactcccaatctcgaatcaaaagtgttcggtccaccagacttcaggaccaaaccaga 23426339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 397
Target Start/End: Complemental strand, 8730983 - 8730901
Alignment:
Q  315 ctgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccct 397  Q
    |||| |||||||| ||||| |||||||||||| ||||| ||| ||||||||| |||  | |||||||||| || |||||||||    
T  8730983 ctgaaccaaagaactgactcccgatctcgaattaaaagcgataggtccaccagactgcaagaccaaatcataagggcacccct 8730901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 374
Target Start/End: Original strand, 22675344 - 22675398
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttag 374  Q
    |||||||| ||||| |||||||||||||||||  ||||||||||||| |||||||    
T  22675344 ccaaagaactgactcccgatctcgaatcaaaatcgatcggtccaccagactttag 22675398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 466
Target Start/End: Original strand, 24072411 - 24072457
Alignment:
Q  420 cagctagacaccgactcccgatcttgaagcaaaagtaaccggcccac 466  Q
    |||||| || || ||||||||||||||||||||||||||||||||||    
T  24072411 cagctaaacgccaactcccgatcttgaagcaaaagtaaccggcccac 24072457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 26405226 - 26405344
Alignment:
Q  18 cggtgaaactaggaatataaacaaaaggc----tataaagt-ggaacacccgaaaataaatactataaaaaacacccatgatgataacacccaccaaaat 112  Q
    ||||||||||  ||||| |||||||||||    |||| ||| |||||||||||||||||| ||  |||||| ||||| ||| || |||| ||||||||||    
T  26405226 cggtgaaactgagaatacaaacaaaaggcgtcgtatatagtcggaacacccgaaaataaacaccttaaaaa-cacccctgaggacaacaaccaccaaaat 26405324  T
Q  113 atacgttaccacctaaaaca 132  Q
    | |||| |||||||||||||    
T  26405325 acacgtcaccacctaaaaca 26405344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 29087546 - 29087481
Alignment:
Q  316 tgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaa 381  Q
    |||| ||||||| ||||| | |||||||||||||||| |||| |||||||| ||||||| ||||||    
T  29087546 tgattcaaagaactgactcctgatctcgaatcaaaagggatcagtccaccagactttagaaccaaa 29087481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 335 - 371
Target Start/End: Complemental strand, 12046301 - 12046265
Alignment:
Q  335 ccgatctcgaatcaaaagtgatcggtccaccaaactt 371  Q
    ||||||||||||||||||||||||| |||||||||||    
T  12046301 ccgatctcgaatcaaaagtgatcggcccaccaaactt 12046265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 29087419 - 29087367
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccga 469  Q
    |||||||||||| |||||||||||||| ||||| |||  ||||||||||||||    
T  29087419 ttgcagctagactccgactcccgatctcgaagccaaatgaaccggcccaccga 29087367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 8297808 - 8297749
Alignment:
Q  80 aaaaacacccatgatgataacacccaccaaaatatacgttaccacctaaaacatactcct 139  Q
    |||||||||| ||| ||||||| ||||||||||| || | ||||||||||||| ||||||    
T  8297808 aaaaacacccctgaggataacatccaccaaaatacacatcaccacctaaaacacactcct 8297749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 7195063 - 7195117
Alignment:
Q  98 aacacccaccaaaatatacgttaccacctaaaacatactcctacacgagaacaac 152  Q
    |||||||||||||||| |||| ||||||||||||| |||||| ||| | ||||||    
T  7195063 aacacccaccaaaatacacgtcaccacctaaaacagactccttcacaaaaacaac 7195117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 204 - 290
Target Start/End: Original strand, 17853971 - 17854056
Alignment:
Q  204 caccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaa 290  Q
    ||||| ||||||||| ||||||||||| || |||   |||||||| ||||||||||||||||||| || || | | |||||||||||    
T  17853971 caccatagctgagccacatccgaaaag-tcatattctaaagatcattcaacttccaccacctctcaacttcaggtccaccgaaagaa 17854056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 483
Target Start/End: Complemental strand, 18593181 - 18593115
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaa 483  Q
    ||||| |||||| |||||||||||||| ||||| |||  |||||||||||||| || || |||||||    
T  18593181 ttgcaactagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaa 18593115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 324 - 402
Target Start/End: Complemental strand, 31721734 - 31721656
Alignment:
Q  324 agaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccc 402  Q
    |||| ||||| |||||||||||||||||| |||||| |||  | |||| || |||| ||||||| ||||||||| ||||    
T  31721734 agaactgactcccgatctcgaatcaaaagcgatcggcccattagacttcagaaccacatcagaagggcaccccttaccc 31721656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 382
Target Start/End: Complemental strand, 18593303 - 18593242
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaat 382  Q
    ||||||| | ||| ||||||||||||||||||||||| | |||| ||||| ||| |||||||    
T  18593303 caaagaactaactcccgatctcgaatcaaaagtgatctgcccactaaactatagcaccaaat 18593242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 399
Target Start/End: Complemental strand, 25992066 - 25991989
Alignment:
Q  322 aaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctca 399  Q
    |||||| |||||  ||||||||||||||||| ||| || |||||| ||||||| ||||||  |||| ||||| |||||    
T  25992066 aaagaactgactctcgatctcgaatcaaaagcgattggcccaccagactttagcaccaaaatagaagggcactcctca 25991989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 26045683 - 26045760
Alignment:
Q  55 ggaacacccgaaaataaatactataaaaaacacccatgatgataacacccaccaaaatatacgttaccacctaaaaca 132  Q
    |||||| || |||||||| ||  |||||||| ||| ||| || |||||||||||||||  |||| |||||||||||||    
T  26045683 ggaacatccaaaaataaacaccctaaaaaacgcccctgaggacaacacccaccaaaattcacgtcaccacctaaaaca 26045760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 145
Target Start/End: Original strand, 33109922 - 33110007
Alignment:
Q  57 aacacccgaaaataaatactataaaaaacacccatgatgataacacccaccaaaatatacgttaccacctaaaacatactcctacacga 145  Q
    |||||||||||||||| ||| |||||| |||||   |||| |||||||||||||||| |||| | ||||||||||| || ||| |||||    
T  33109922 aacacccgaaaataaacactttaaaaa-caccct--atgacaacacccaccaaaatacacgtcatcacctaaaacaaaccccttcacga 33110007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 113
Target Start/End: Complemental strand, 37108136 - 37108103
Alignment:
Q  80 aaaaacacccatgatgataacacccaccaaaata 113  Q
    |||||||||||||| |||||||||||||||||||    
T  37108136 aaaaacacccatgaggataacacccaccaaaata 37108103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 417 - 481
Target Start/End: Complemental strand, 34378036 - 34377972
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacac 481  Q
    ||||||||||||  ||||||||||||| ||||| |||  |||||||| ||||| ||||| |||||    
T  34378036 ttgcagctagacctcgactcccgatctcgaagccaaatgaaccggcctaccgaaaaccagcacac 34377972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 201 - 401
Target Start/End: Complemental strand, 19564 - 19363
Alignment:
Q  201 caacaccaaagctgagccgcatccgaaaagctcctatctgaaa-gatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccatnnnn 299  Q
    |||||||||||| ||||| ||| |||||||||||| || |||| ||| | ||| ||||||||| ||||||||||| ||| ||||||||||||||||        
T  19564 caacaccaaagcagagccacattcgaaaagctcctgtccgaaaagattattcagcttccaccaactctcgacctccgatccaccgaaagaaaccataaaa 19465  T
Q  300 nnnnnnnnnnnnnnnctgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctca 399  Q
                    ||| |||||||| ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||    
T  19464 agcccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccctca 19365  T
Q  400 cc 401  Q
    ||    
T  19364 cc 19363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 418 - 552
Target Start/End: Complemental strand, 19320 - 19189
Alignment:
Q  418 tgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgac-aacgacgtgatatatatgcggtc 516  Q
    |||||||||||||||||||||||||| ||||||||| |||||| |||| ||  ||||| || ||||| |||| ||| |||||| ||||| ||    |||     
T  19320 tgcagctagacaccgactcccgatctcgaagcaaaattaaccgacccatcgggaaccagcatacaaacagtaagacaaacgacatgatagat----ggtg 19225  T
Q  517 gtgcaaacaacaaactgatcaaaaggaaaaagctca 552  Q
    |||||||||||||||  ||| ||||||||| |||||    
T  19224 gtgcaaacaacaaacatatctaaaggaaaaggctca 19189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 64; Significance: 1e-27; HSPs: 3)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 202 - 394
Target Start/End: Complemental strand, 58306 - 58114
Alignment:
Q  202 aacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccatnnnnnn 301  Q
    ||||||||||||||||| ||| |||||||||| |||| ||||||| | ||| |||||| || ||||||||||| ||| ||||||||||||||||          
T  58306 aacaccaaagctgagccacattcgaaaagctcttatccgaaagataattcagcttccatcatctctcgacctccgatccaccgaaagaaaccataaaaag 58207  T
Q  302 nnnnnnnnnnnnnctgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacc 394  Q
                  ||||||||| |||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||| ||| ||||||    
T  58206 cctaaaaccaaacttgatccaaacaattgacttccgatcttgaatcaaaagtgatcggcccaccaaactttaggaccaaatctgaagggcacc 58114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 417 - 494
Target Start/End: Complemental strand, 58066 - 57989
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgaca 494  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||| |  |  || || ||||||||||||||||||    
T  58066 ttgcagctagacaacgactcccgatctcgaagcaaaagtaaccggcctaatggaaatcagcacacaaaaagtatgaca 57989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 575 - 608
Target Start/End: Complemental strand, 57977 - 57944
Alignment:
Q  575 caaacaccctaaacaccttaacaaccctaaaaac 608  Q
    ||||||||||||||||||||||||||| ||||||    
T  57977 caaacaccctaaacaccttaacaacccaaaaaac 57944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 61; Significance: 7e-26; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 201 - 401
Target Start/End: Original strand, 42038 - 42239
Alignment:
Q  201 caacaccaaagctgagccgcatccgaaaagctcctatctgaaa-gatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccatnnnn 299  Q
    |||||||||||| ||||| ||| ||||||||||||||| |||| ||| | ||| ||||||||| ||||||||||| ||| ||| ||||||||||||        
T  42038 caacaccaaagcagagccacattcgaaaagctcctatccgaaaagattattcagcttccaccaactctcgacctccgatccactgaaagaaaccataaaa 42137  T
Q  300 nnnnnnnnnnnnnnnctgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctca 399  Q
                    ||| |||||||| ||||| ||||||||||||||||||||||||| |||||| |||||||||| ||||||||| |||||||||||    
T  42138 atcccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggactaaatcagaagggcacccctca 42237  T
Q  400 cc 401  Q
    ||    
T  42238 cc 42239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 418 - 633
Target Start/End: Original strand, 42282 - 42494
Alignment:
Q  418 tgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgac-aacgacgtgatatatatgcggtc 516  Q
    |||||||||||| ||||||||||||| ||||||||| |||||| |||| ||  ||||| || ||||| |||| ||| |||||| ||||| ||    |||     
T  42282 tgcagctagacatcgactcccgatctcgaagcaaaattaaccgacccatcgggaaccagcatacaaacagtaagacaaacgacatgatagat----ggtg 42377  T
Q  517 gtgcaaacaacaaactgatcaaaaggaaaaagctcaacacaacgagacccacttccttcaaacaccctaaacaccttaacaaccctaaaaaccacaacaa 616  Q
    |||||||||||||||  ||| ||||||||| ||| | | ||| |||| |  || ||| |||||||| ||||||| |||||||||| ||||||   |||||    
T  42378 gtgcaaacaacaaacatatccaaaggaaaaggcttagctcaatgagatcggctccctccaaacaccataaacactttaacaaccccaaaaacgcaaacaa 42477  T
Q  617 gagttactgactacgaa 633  Q
    ||| || |||| |||||    
T  42478 gagctagtgacgacgaa 42494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 61; Significance: 7e-26; HSPs: 4)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 417 - 607
Target Start/End: Complemental strand, 36646 - 36457
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaa-gtatgacaacgacgtgatat-atatgcgg 514  Q
    ||||||||||||||||||||| ||||| ||| ||||| ||| ||||||||||  |||||||||||||||| | |||||||     ||| || ||||||||    
T  36646 ttgcagctagacaccgactcctgatctcgaatcaaaattaatcggcccaccggaaaccaacacacaaaaaagaatgacaaa----tgacatgatatgcgg 36551  T
Q  515 tcgtgcaaacaacaaactgatcaaaaggaaaaagctcaacacaacgagacccacttccttcaaacaccct-aaacaccttaacaaccctaaaaa 607  Q
    | |||||||||||||||  |||||||||||||  | || | |||||||| || ||||||  ||||||||| ||||||||||||||||| |||||    
T  36550 tggtgcaaacaacaaacatatcaaaaggaaaagtcacagctcaacgagatccgcttcctctaaacaccctaaaacaccttaacaaccccaaaaa 36457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 321 - 400
Target Start/End: Complemental strand, 36767 - 36688
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcac 400  Q
    ||||||| ||||| ||||||||||||||||||||||| | || ||| |||||||||||||||||||| ||||||||||||    
T  36767 caaagaactgactcccgatctcgaatcaaaagtgatcagcccgccagactttaggaccaaatcagaagggcacccctcac 36688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 36888 - 36799
Alignment:
Q  202 aacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaa 291  Q
    ||||||||||||||||| ||  ||||||||||||| | |||||| || |||||||||||||| |||||||||| ||| ||||||||||||    
T  36888 aacaccaaagctgagccacaatcgaaaagctcctaaccgaaagaccattcaacttccaccacatctcgacctccgatccaccgaaagaaa 36799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 55 - 145
Target Start/End: Complemental strand, 37068 - 36978
Alignment:
Q  55 ggaacacccgaaaataaatactataaaaaacacccatgatgataacacccaccaaaatatacgttaccacctaaaacatactcctacacga 145  Q
    |||||| ||||||||||| || ||||||||||||||||| ||  ||||||| ||||||| |||| ||||||||||||| |||||| |||||    
T  37068 ggaacatccgaaaataaacaccataaaaaacacccatgaggaccacacccaacaaaatacacgtcaccacctaaaacagactccttcacga 36978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 2e-23; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 202 - 399
Target Start/End: Original strand, 17656904 - 17657101
Alignment:
Q  202 aacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccatnnnnnn 301  Q
    |||||||||| |||||| | || ||||||||||||| |||||||||| ||| |||||||||||| |||||||| ||| ||||||||||||||||          
T  17656904 aacaccaaagttgagccacctctgaaaagctcctatatgaaagatcattcagcttccaccacctatcgacctccgatccaccgaaagaaaccataaaaag 17657003  T
Q  302 nnnnnnnnnnnnnctgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctca 399  Q
                  ||| |||||||| ||||| ||||||||||||||||||||||||  |||||| |||||||| |||| | |||| |||||||||||    
T  17657004 tccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcgacccaccatactttaggtccaacttagaagggcacccctca 17657101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 421 - 597
Target Start/End: Original strand, 17657147 - 17657324
Alignment:
Q  421 agctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgacaa-----cgacgtgatatatatgcggt 515  Q
    |||||| |||||||||||||||| ||||||||| ||||||||||| ||  |||||||||||||||||||||||||     |||| |||||||    ||||    
T  17657147 agctagccaccgactcccgatctcgaagcaaaattaaccggcccatcggaaaccaacacacaaaaagtatgacaaacgatcgacatgatata----cggt 17657242  T
Q  516 cgtgcaaacaacaaactgatcaaaaggaaaaagctcaacacaacgagacccacttccttcaaacaccctaaacaccttaaca 597  Q
     | ||| ||||||||  ||||||||| ||||  ||||   ||||| || || |||||| |||||||| ||||||||||||||    
T  17657243 ggagcacacaacaaatagatcaaaagaaaaactctcagttcaacgggatccgcttcctccaaacaccataaacaccttaaca 17657324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 168 - 262
Target Start/End: Original strand, 8862469 - 8862563
Alignment:
Q  168 cgtcgtcattactcacccccaaagaaaaacacccaacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcaacttccacca 262  Q
    |||||||| |||| || |||||||||||||||||| ||||||||||||||| |||| |||||| || |||| ||||||||| ||| |||||||||    
T  8862469 cgtcgtcactactgactcccaaagaaaaacacccaccaccaaagctgagccacatctgaaaagttcatatccgaaagatcattcagcttccacca 8862563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 320 - 402
Target Start/End: Original strand, 10248573 - 10248655
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccc 402  Q
    |||||||| ||||| ||||||| |||||||||||||||||||||||||| |||||||| |||| |||| | ||||||||||||    
T  10248573 ccaaagaactgactcccgatcttgaatcaaaagtgatcggtccaccaaattttaggacaaaattagaaggacacccctcaccc 10248655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 417 - 485
Target Start/End: Original strand, 10248695 - 10248763
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaaa 485  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||||| |||||||||    
T  10248695 ttgcagctagacaccgactcccgatctcgaagcaaaagtaactggcccaccggaaaccaccacacaaaa 10248763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 329 - 403
Target Start/End: Original strand, 15821408 - 15821482
Alignment:
Q  329 tgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccct 403  Q
    ||||| ||||||||||||||||||||||| | |||||| ||||||| |||||||||| | |||||||||| ||||    
T  15821408 tgactcccgatctcgaatcaaaagtgatcagcccaccagactttagaaccaaatcagcagggcacccctcgccct 15821482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 321 - 398
Target Start/End: Original strand, 24995416 - 24995493
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    ||||||| ||||| ||||||||||||||||||||||||| |||||| ||| ||| ||||||| || ||| ||||||||    
T  24995416 caaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcaagacacccctc 24995493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 320 - 402
Target Start/End: Original strand, 17720726 - 17720807
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccc 402  Q
    |||||||| ||||| |||||| ||||||||||| |||| | |||||| |||||||||||||| |||| |||||||||| ||||    
T  17720726 ccaaagaactgactcccgatc-cgaatcaaaagcgatcagcccaccatactttaggaccaaaccagacaggcaccccttaccc 17720807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 417 - 483
Target Start/End: Original strand, 24995538 - 24995604
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaa 483  Q
    |||||||||||| |||||||||||||| ||||| |||  |||||||||||||| ||||| |||||||    
T  24995538 ttgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaaccagcacacaa 24995604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 320 - 402
Target Start/End: Original strand, 30236148 - 30236230
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccc 402  Q
    |||||||| ||||| |||||||||||||||||| |||||  |||||| |||| |  |||||||||||| ||||||||| ||||    
T  30236148 ccaaagaactgactcccgatctcgaatcaaaagcgatcgtcccaccagacttcaaaaccaaatcagaagggcaccccttaccc 30236230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 321 - 395
Target Start/End: Original strand, 31207383 - 31207457
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcaccc 395  Q
    ||||||| ||||| ||||||||||||||||||||||||| |||||| ||| ||| ||||||| || | |||||||    
T  31207383 caaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcaccc 31207457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 9519559 - 9519478
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccc 402  Q
    ||||||| ||||| ||||||||||||||||| ||||||| |||| | ||| ||| ||||||| || | ||||||||||||||    
T  9519559 caaagaactgactcccgatctcgaatcaaaactgatcggcccactagactatagtaccaaattagcagggcacccctcaccc 9519478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 320 - 381
Target Start/End: Complemental strand, 15906747 - 15906686
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaa 381  Q
    |||||||| ||||| |||||||||||||||| |||||||| |||||| |||| |||||||||    
T  15906747 ccaaagaactgactcccgatctcgaatcaaatgtgatcggcccaccagacttcaggaccaaa 15906686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 321 - 398
Target Start/End: Complemental strand, 36630897 - 36630820
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    ||||||| ||||  |||||||||||| |||||||||||| |||||| ||||||| ||||||| || | ||||||||||    
T  36630897 caaagaactgacacccgatctcgaattaaaagtgatcggcccaccagactttagaaccaaattagcagggcacccctc 36630820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 65 - 152
Target Start/End: Original strand, 8862352 - 8862439
Alignment:
Q  65 aaaataaatactataaaaaacacccatgatgataacacccaccaaaatatacgttaccacctaaaacatactcctacacgagaacaac 152  Q
    |||||||| || |||||||||||||   | || ||||||||| |||||| |||| ||||||||||||  |||| ||||||||||||||    
T  8862352 aaaataaacaccataaaaaacaccccgaaggacaacacccacaaaaatacacgtcaccacctaaaactgactcttacacgagaacaac 8862439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 78 - 145
Target Start/End: Original strand, 10248309 - 10248376
Alignment:
Q  78 taaaaaacacccatgatgataacacccaccaaaatatacgttaccacctaaaacatactcctacacga 145  Q
    |||||||||||| ||| || ||||||| |||||||| |||| ||||||||||||| |||||| |||||    
T  10248309 taaaaaacacccttgaggacaacacccgccaaaatacacgtcaccacctaaaacaaactccttcacga 10248376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 31210333 - 31210400
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaaa 484  Q
    |||||||||||| | |||||||||||||||||| |||  |||||||||||||| ||||| | ||||||    
T  31210333 ttgcagctagaccctgactcccgatcttgaagccaaatgaaccggcccaccgaaaaccagcgcacaaa 31210400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 336 - 403
Target Start/End: Complemental strand, 35062502 - 35062435
Alignment:
Q  336 cgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccct 403  Q
    ||||||||||||||||  |||||| |||||| |||| || ||||||||||| |||||||||| |||||    
T  35062502 cgatctcgaatcaaaatcgatcggcccaccagacttcagaaccaaatcagagaggcaccccttaccct 35062435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 274
Target Start/End: Original strand, 12197988 - 12198042
Alignment:
Q  220 catccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctc 274  Q
    |||||||||||||| |||| ||||||||| | |||||||| ||||||||||||||    
T  12197988 catccgaaaagctcatatccgaaagatcattgaacttccatcacctctcgacctc 12198042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 274
Target Start/End: Original strand, 12442416 - 12442470
Alignment:
Q  220 catccgaaaagctcctatctgaaagatcaatcaacttccaccacctctcgacctc 274  Q
    |||||||||||||| |||| ||||||||| | |||||||| ||||||||||||||    
T  12442416 catccgaaaagctcatatccgaaagatcattgaacttccatcacctctcgacctc 12442470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 403
Target Start/End: Original strand, 16457482 - 16457563
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccct 403  Q
    ||||||| ||||| ||||||||||||||||||||||||| |||||||||| ||| | ||||| || | | |||||||| ||||    
T  16457482 caaagaactgactcccgatctcgaatcaaaagtgatcgg-ccaccaaactatagtatcaaattagcaggacacccctcgccct 16457563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 387
Target Start/End: Original strand, 32945724 - 32945790
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaa 387  Q
    ||||||||||||| ||||||||||||||||||||||| | |||| | |||| || | ||||||||||    
T  32945724 caaagaattgactcccgatctcgaatcaaaagtgatcagcccactatacttcagaatcaaatcagaa 32945790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 398
Target Start/End: Original strand, 32066324 - 32066393
Alignment:
Q  329 tgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    ||||| ||||| ||||||||||||||||||| |||||| ||| ||| ||||||| || | ||||||||||    
T  32066324 tgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctc 32066393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 337 - 398
Target Start/End: Original strand, 34389042 - 34389103
Alignment:
Q  337 gatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    ||||||||||||||||||||||| |||||| ||| ||| ||||||| || | ||||||||||    
T  34389042 gatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccctc 34389103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 483
Target Start/End: Complemental strand, 9519437 - 9519371
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaa 483  Q
    |||||||||||| |||||||||||||| ||||| |||  |||||||| || || ||||| |||||||    
T  9519437 ttgcagctagaccccgactcccgatctcgaagccaaatgaaccggcctactgaaaaccagcacacaa 9519371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 295
Target Start/End: Original strand, 10248494 - 10248548
Alignment:
Q  241 aaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaaaccat 295  Q
    |||||||||||| ||||||||||||| || |||| ||| |||| |||||||||||    
T  10248494 aaagatcaatcagcttccaccacctcgcggcctccgatccaccaaaagaaaccat 10248548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 324 - 386
Target Start/End: Complemental strand, 10552325 - 10552263
Alignment:
Q  324 agaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcaga 386  Q
    |||| ||||| ||||||| |||||||||| |||||| |||||| |||| || |||||||||||    
T  10552325 agaactgactcccgatctagaatcaaaagcgatcggcccaccagacttcagaaccaaatcaga 10552263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 483
Target Start/End: Original strand, 34389148 - 34389214
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaa 483  Q
    |||||||||||| |||||||||||||| ||||| |||  |||||||| | ||| ||||| |||||||    
T  34389148 ttgcagctagaccccgactcccgatctcgaagccaaatgaaccggcctatcgaaaaccagcacacaa 34389214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 483
Target Start/End: Complemental strand, 36630775 - 36630709
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaa 483  Q
    ||||||||||||  || |||||||||| ||||| |||  |||||||| ||||| |||||||||||||    
T  36630775 ttgcagctagacctcgtctcccgatctcgaagccaaatgaaccggcctaccgaaaaccaacacacaa 36630709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 290
Target Start/End: Original strand, 17720647 - 17720696
Alignment:
Q  241 aaagatcaatcaacttccaccacctctcgacctctgattcaccgaaagaa 290  Q
    |||||||||||||||||||||||||||| |||||   | |||||||||||    
T  17720647 aaagatcaatcaacttccaccacctctcaacctcaagtccaccgaaagaa 17720696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 398
Target Start/End: Original strand, 37986879 - 37986956
Alignment:
Q  321 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    ||||||| ||||| ||||||||||||||||| |||| || |||||| ||| ||  ||||||| || | ||||||||||    
T  37986879 caaagaactgactcccgatctcgaatcaaaaatgattggcccaccagactataacaccaaattagcagggcacccctc 37986956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 483
Target Start/End: Original strand, 37987002 - 37987067
Alignment:
Q  418 tgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccaccgacaaccaacacacaa 483  Q
    |||| |||||| |||||| ||||||| ||||| |||  |||||||||||||| ||||| |||||||    
T  37987002 tgcaactagaccccgactaccgatctcgaagccaaatgaaccggcccaccgaaaaccagcacacaa 37987067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 517 - 633
Target Start/End: Original strand, 10248791 - 10248907
Alignment:
Q  517 gtgcaaacaacaaactgatcaaaaggaaaaagctcaacacaacgagacccacttccttcaaacaccctaaacaccttaacaaccctaaaaaccacaacaa 616  Q
    |||||||||||||||  ||||||||||| |  || | | ||||| ||||  || ||| |||||||| ||||||||||||||| || ||||||   |||||    
T  10248791 gtgcaaacaacaaaccaatcaaaaggaatagactaagctcaacgggacctgctccctccaaacaccttaaacaccttaacaatccaaaaaactcaaacaa 10248890  T
Q  617 gagttactgactacgaa 633  Q
    ||| || |||| |||||    
T  10248891 gagctagtgacgacgaa 10248907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 55 - 139
Target Start/End: Original strand, 17656456 - 17656539
Alignment:
Q  55 ggaacacccgaaaataaatactataaaaaacacccatgatgataacacccaccaaaatatacgttaccacctaaaacatactcct 139  Q
    ||||||||||||||| || ||  |||||| ||||| ||| || |||||||||||||||  |||| |||| |||||||| ||||||    
T  17656456 ggaacacccgaaaattaacaccctaaaaa-cacccttgaggacaacacccaccaaaattcacgtcaccatctaaaacagactcct 17656539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1613 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 320 - 387
Target Start/End: Original strand, 1037 - 1104
Alignment:
Q  320 ccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaa 387  Q
    |||||||| ||||| |||||||||||||||||| |||||| |||||| |||| | |||||||||||||    
T  1037 ccaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagacttcatgaccaaatcagaa 1104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1613; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 417 - 466
Target Start/End: Original strand, 1158 - 1207
Alignment:
Q  417 ttgcagctagacaccgactcccgatcttgaagcaaaagtaaccggcccac 466  Q
    ||||||||||||||| |||||| |||| ||||||||||||| ||||||||    
T  1158 ttgcagctagacaccaactcccaatctcgaagcaaaagtaatcggcccac 1207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1384 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1384
Description:

Target: scaffold1384; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 1372 - 1472
Alignment:
Q  56 gaacacccgaaaa-taaatactataaaaaacacccatgatgataac---acccaccaaaatatacgttaccacctaaaacatactcctacacgagaacaa 151  Q
    ||||||||||||| |||| || ||||||||||||| | | || |||   |||||| |||||| |||| ||||||||||||  ||||||||||||||||||    
T  1372 gaacacccgaaaaataaacaccataaaaaacacccctaaggacaacaaaacccacaaaaatacacgtcaccacctaaaactgactcctacacgagaacaa 1471  T
Q  152 c 152  Q
    |    
T  1472 c 1472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 336 - 402
Target Start/End: Complemental strand, 47138 - 47072
Alignment:
Q  336 cgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctcaccc 402  Q
    ||||||||||||||||||||| ||| ||||| || | |||  | |||||||| ||||||||||||||    
T  47138 cgatctcgaatcaaaagtgattggttcaccagacatcagggtctaatcagaagggcacccctcaccc 47072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 398
Target Start/End: Original strand, 35800 - 35869
Alignment:
Q  329 tgactgccgatctcgaatcaaaagtgatcggtccaccaaactttaggaccaaatcagaaaggcacccctc 398  Q
    ||||| ||||||||||||||||||||||||| |||| | ||| ||  ||||||| ||  |||||||||||    
T  35800 tgactcccgatctcgaatcaaaagtgatcggcccactagactatataaccaaattagctaggcacccctc 35869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 521 - 601
Target Start/End: Original strand, 36015 - 36095
Alignment:
Q  521 aaacaacaaactgatcaaaaggaaaaagctcaacacaacgagacccacttccttcaaacaccctaaacaccttaacaaccc 601  Q
    |||||||||||  ||||||||||||| ||||||||||||| ||| | |  ||||||||| |  ||||||||| ||| ||||    
T  36015 aaacaacaaacaaatcaaaaggaaaaggctcaacacaacgtgacactcacccttcaaactctgtaaacacctaaaccaccc 36095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University