View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10207_low_11 (Length: 391)
Name: NF10207_low_11
Description: NF10207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10207_low_11 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 358; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 6 - 391
Target Start/End: Complemental strand, 11024286 - 11023901
Alignment:
| Q |
6 |
caatgagatggacatcagtcaccaatttctcgttgtaatattgatccccgaatccgggcattgtaaccattggtactccggaacttattgcttccacggt |
105 |
Q |
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| T |
11024286 |
caatgcgatgcacctcagtcaccaatttctcgttgtaatattgatccccgaatccgggcattgtaaccattggtactccggaacttattgcttccacggt |
11024187 |
T |
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| Q |
106 |
cgcgttccagccacaatgcgttaagaatccgcctatcgatggatgatccaatattaacgcttgtggaacccatcctttaatcaacattcctttcttttct |
205 |
Q |
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| T |
11024186 |
cgcgttccagccacaatgcgttaagaatccgcctatcgatggatgatccaatattaacgcttgtggaacccatcctttaatcaacattcctttcttttct |
11024087 |
T |
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| Q |
206 |
tccttcatcctctcggtaaaaccttttggtaaccaattatcttcatcttcaccttcttttccatgaaccacccaaaggaattgatgctttgacgcttcga |
305 |
Q |
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| T |
11024086 |
tccttcatcctctctacaaaaccttttggtaaccaattatcttcatcttctccttcttttccatgaaccacccaaaggaattgatgctttgacgcttcga |
11023987 |
T |
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| Q |
306 |
ttccattagccatctccttaagttgttcgtttgataaacgacataaactcccgaagctaatgtaaagaaccgaacttggttcctta |
391 |
Q |
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| T |
11023986 |
ttccattagccatctccttaagttgttcgtttgataaacgacataaactcccgaagctaatgtaaagaaccgaacttggttcctta |
11023901 |
T |
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