View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10207_low_58 (Length: 215)
Name: NF10207_low_58
Description: NF10207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10207_low_58 |
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Alignment Details
Target: chr1 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 5107169 - 5107351
Alignment:
| Q |
20 |
ctcaccaccattttgcatatgtgacatatcacctaacttcctatgctttaatttaagcaaaagaacctcaaactcatcttgcatatgaagcaaagcttga |
119 |
Q |
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| T |
5107169 |
ctcaccaccattttgcatatgtgacatatcacctaacttcctatgctttaatttaagcaaaagaacctcaaactcatcttgcatatgaagcaaagcttga |
5107268 |
T |
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| Q |
120 |
tccaacaaaccttcaaatctcatttcatcaacctcagtttcataaagtgccttaagagttataagtgcttctcttaacctttg |
202 |
Q |
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| T |
5107269 |
tccaacaaaccttcaaatctcatttcatcaacctcagtttcataaagtgccttaagagttataagtgcttctcttaacctttg |
5107351 |
T |
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