View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10208_low_7 (Length: 309)

Name: NF10208_low_7
Description: NF10208
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10208_low_7
NF10208_low_7
[»] chr1 (73 HSPs)
chr1 (181-300)||(46141737-46141856)
chr1 (181-293)||(6437538-6437650)
chr1 (182-294)||(46973165-46973276)
chr1 (181-294)||(41804032-41804145)
chr1 (185-294)||(23276111-23276220)
chr1 (182-299)||(35258872-35258989)
chr1 (180-269)||(52802116-52802205)
chr1 (185-292)||(29434936-29435043)
chr1 (213-299)||(19054015-19054101)
chr1 (186-280)||(49927517-49927611)
chr1 (182-255)||(3941150-3941223)
chr1 (182-299)||(36076558-36076674)
chr1 (181-281)||(18975119-18975219)
chr1 (185-292)||(19499115-19499220)
chr1 (215-294)||(35521575-35521654)
chr1 (182-280)||(6562161-6562259)
chr1 (182-280)||(13178132-13178230)
chr1 (182-299)||(13173792-13173908)
chr1 (182-299)||(21944380-21944497)
chr1 (182-259)||(23359349-23359426)
chr1 (206-291)||(36908542-36908627)
chr1 (182-259)||(44470011-44470088)
chr1 (181-291)||(26633494-26633601)
chr1 (202-294)||(27485020-27485112)
chr1 (181-273)||(29438019-29438111)
chr1 (182-294)||(48751410-48751522)
chr1 (186-280)||(11183161-11183255)
chr1 (213-299)||(35527044-35527130)
chr1 (207-256)||(4516030-4516079)
chr1 (182-259)||(6557911-6557988)
chr1 (198-299)||(13972020-13972119)
chr1 (182-259)||(15047278-15047355)
chr1 (182-255)||(45943726-45943799)
chr1 (180-259)||(6562865-6562944)
chr1 (182-294)||(8460097-8460208)
chr1 (186-230)||(13147521-13147565)
chr1 (186-286)||(29261383-29261483)
chr1 (182-286)||(38689901-38690004)
chr1 (203-255)||(46044747-46044799)
chr1 (180-255)||(1167562-1167637)
chr1 (201-280)||(8458960-8459038)
chr1 (213-280)||(23272824-23272891)
chr1 (181-247)||(36072377-36072443)
chr1 (182-255)||(44336249-44336322)
chr1 (182-255)||(46043506-46043579)
chr1 (182-259)||(51289960-51290037)
chr1 (182-258)||(22345258-22345333)
chr1 (182-258)||(24364725-24364801)
chr1 (201-257)||(27115842-27115898)
chr1 (182-230)||(29424405-29424453)
chr1 (198-253)||(5845504-5845559)
chr1 (181-300)||(49924811-49924930)
chr1 (213-256)||(51337544-51337587)
chr1 (182-224)||(13636122-13636164)
chr1 (202-260)||(20349452-20349510)
chr1 (206-280)||(30905746-30905820)
chr1 (201-259)||(30910022-30910080)
chr1 (182-224)||(46217318-46217360)
chr1 (181-227)||(47586236-47586282)
chr1 (203-280)||(5077916-5077993)
chr1 (182-223)||(29425336-29425377)
chr1 (215-283)||(36911703-36911769)
chr1 (202-259)||(41453834-41453891)
chr1 (185-222)||(42572760-42572797)
chr1 (182-222)||(3728768-3728808)
chr1 (182-222)||(3944007-3944047)
chr1 (182-222)||(3993843-3993883)
chr1 (182-222)||(8548669-8548709)
chr1 (180-220)||(13633904-13633944)
chr1 (182-230)||(13761044-13761092)
chr1 (182-222)||(22524159-22524199)
chr1 (182-230)||(35255300-35255348)
chr1 (182-222)||(49502796-49502836)
[»] chr5 (47 HSPs)
chr5 (181-300)||(3603147-3603266)
chr5 (181-299)||(41201684-41201802)
chr5 (208-300)||(18310047-18310139)
chr5 (182-294)||(18538335-18538447)
chr5 (181-300)||(20200147-20200266)
chr5 (201-290)||(24053145-24053234)
chr5 (182-299)||(38968051-38968168)
chr5 (185-294)||(17966889-17966998)
chr5 (182-299)||(20192309-20192426)
chr5 (7-74)||(13837907-13837972)
chr5 (181-281)||(25499886-25499986)
chr5 (182-286)||(34122493-34122597)
chr5 (181-291)||(1398568-1398678)
chr5 (182-280)||(18307229-18307327)
chr5 (182-291)||(3600300-3600410)
chr5 (182-280)||(33993255-33993353)
chr5 (182-255)||(25889994-25890067)
chr5 (181-254)||(34682258-34682331)
chr5 (186-281)||(8702202-8702297)
chr5 (180-259)||(28388517-28388596)
chr5 (182-280)||(17965824-17965922)
chr5 (182-280)||(25877597-25877694)
chr5 (182-280)||(34123935-34124033)
chr5 (182-259)||(1035180-1035257)
chr5 (182-291)||(33995148-33995257)
chr5 (182-255)||(39742575-39742648)
chr5 (185-273)||(7800990-7801078)
chr5 (207-294)||(19228671-19228758)
chr5 (198-280)||(39743164-39743246)
chr5 (181-230)||(13838423-13838472)
chr5 (182-259)||(27532617-27532694)
chr5 (182-286)||(4204211-4204313)
chr5 (182-224)||(7757356-7757398)
chr5 (182-224)||(19037470-19037512)
chr5 (182-280)||(28387244-28387342)
chr5 (236-294)||(35567081-35567139)
chr5 (184-230)||(35926387-35926433)
chr5 (182-280)||(41798793-41798891)
chr5 (180-253)||(13665418-13665491)
chr5 (182-243)||(25497523-25497584)
chr5 (182-258)||(542790-542866)
chr5 (202-258)||(13568095-13568151)
chr5 (182-222)||(13837757-13837797)
chr5 (182-258)||(25897079-25897155)
chr5 (182-230)||(27659965-27660013)
chr5 (182-222)||(28238172-28238212)
chr5 (182-222)||(30708873-30708913)
[»] chr3 (73 HSPs)
chr3 (181-300)||(41579723-41579842)
chr3 (182-300)||(52570566-52570683)
chr3 (182-280)||(41802973-41803071)
chr3 (181-278)||(7247859-7247956)
chr3 (182-299)||(29918341-29918458)
chr3 (182-299)||(29967494-29967611)
chr3 (182-299)||(28611100-28611217)
chr3 (181-300)||(2432942-2433061)
chr3 (181-259)||(19440252-19440330)
chr3 (180-300)||(13896874-13896994)
chr3 (182-294)||(29929387-29929499)
chr3 (182-294)||(29978541-29978653)
chr3 (185-253)||(30256006-30256074)
chr3 (207-294)||(66862-66948)
chr3 (182-273)||(19341594-19341685)
chr3 (182-285)||(42756129-42756232)
chr3 (189-291)||(46344901-46345003)
chr3 (206-291)||(45101872-45101957)
chr3 (205-300)||(19454348-19454443)
chr3 (182-293)||(34691587-34691698)
chr3 (182-300)||(52567718-52567836)
chr3 (182-259)||(2743394-2743471)
chr3 (205-294)||(7839522-7839611)
chr3 (181-254)||(9582548-9582621)
chr3 (7-74)||(1293560-1293625)
chr3 (186-294)||(49196453-49196561)
chr3 (181-258)||(3112796-3112873)
chr3 (182-259)||(9429849-9429926)
chr3 (182-299)||(55207663-55207780)
chr3 (181-281)||(43571684-43571784)
chr3 (182-286)||(48250869-48250973)
chr3 (184-292)||(48888704-48888811)
chr3 (183-294)||(11380402-11380513)
chr3 (185-272)||(46989530-46989617)
chr3 (201-259)||(13743289-13743347)
chr3 (182-259)||(36812832-36812910)
chr3 (198-300)||(41805691-41805793)
chr3 (180-238)||(46347719-46347777)
chr3 (182-224)||(49140847-49140889)
chr3 (181-230)||(1294076-1294125)
chr3 (182-259)||(4002505-4002582)
chr3 (182-300)||(6489288-6489402)
chr3 (182-259)||(13747719-13747795)
chr3 (182-251)||(20918011-20918080)
chr3 (182-251)||(20926973-20927042)
chr3 (199-280)||(49219808-49219889)
chr3 (182-299)||(51402398-51402515)
chr3 (215-300)||(55267396-55267481)
chr3 (177-260)||(3948723-3948807)
chr3 (182-230)||(19341069-19341117)
chr3 (213-269)||(20366178-20366234)
chr3 (182-258)||(24700718-24700794)
chr3 (182-230)||(32593112-32593160)
chr3 (181-224)||(50604419-50604462)
chr3 (182-224)||(2647699-2647741)
chr3 (204-294)||(6505973-6506063)
chr3 (182-224)||(34049111-34049153)
chr3 (181-258)||(34645559-34645636)
chr3 (201-255)||(41137718-41137772)
chr3 (182-224)||(43476223-43476265)
chr3 (180-294)||(49268843-49268957)
chr3 (182-224)||(54389826-54389868)
chr3 (180-260)||(30839158-30839238)
chr3 (182-259)||(34694434-34694511)
chr3 (182-255)||(36817521-36817594)
chr3 (207-256)||(50216879-50216928)
chr3 (182-230)||(2830989-2831037)
chr3 (182-222)||(30943222-30943262)
chr3 (182-222)||(35743582-35743622)
chr3 (182-222)||(41844364-41844404)
chr3 (215-259)||(45098828-45098871)
chr3 (182-222)||(46697744-46697784)
chr3 (182-222)||(50477213-50477253)
[»] chr8 (52 HSPs)
chr8 (182-299)||(18441441-18441558)
chr8 (182-299)||(41855324-41855441)
chr8 (182-299)||(42602416-42602533)
chr8 (182-294)||(18205747-18205859)
chr8 (181-300)||(18438589-18438708)
chr8 (182-255)||(21406267-21406340)
chr8 (182-255)||(21800759-21800832)
chr8 (181-253)||(40039683-40039755)
chr8 (204-299)||(41858143-41858238)
chr8 (8-74)||(16422419-16422485)
chr8 (182-255)||(38134362-38134438)
chr8 (198-299)||(7168044-7168145)
chr8 (182-279)||(34823016-34823113)
chr8 (182-286)||(35962276-35962380)
chr8 (184-300)||(38872932-38873048)
chr8 (175-280)||(1114718-1114823)
chr8 (182-287)||(22577633-22577738)
chr8 (181-259)||(42605233-42605311)
chr8 (182-255)||(21835179-21835252)
chr8 (199-300)||(35389463-35389564)
chr8 (202-255)||(38135629-38135682)
chr8 (207-299)||(4866391-4866482)
chr8 (180-224)||(32383203-32383247)
chr8 (180-224)||(32437158-32437202)
chr8 (182-294)||(40077250-40077362)
chr8 (205-291)||(3395856-3395942)
chr8 (201-259)||(20549251-20549309)
chr8 (181-255)||(38330516-38330590)
chr8 (198-280)||(39751049-39751130)
chr8 (182-255)||(2146957-2147029)
chr8 (199-280)||(26455698-26455779)
chr8 (182-258)||(22550865-22550941)
chr8 (204-280)||(45454381-45454457)
chr8 (201-288)||(7172606-7172693)
chr8 (182-260)||(7340061-7340140)
chr8 (181-224)||(40039157-40039200)
chr8 (182-225)||(41016444-41016487)
chr8 (182-245)||(43369790-43369853)
chr8 (203-281)||(28168620-28168698)
chr8 (201-255)||(28646266-28646320)
chr8 (201-255)||(28650850-28650904)
chr8 (182-224)||(34366942-34366984)
chr8 (186-280)||(35966753-35966847)
chr8 (182-224)||(39277461-39277503)
chr8 (204-258)||(39753020-39753073)
chr8 (182-228)||(41250072-41250118)
chr8 (187-272)||(44052231-44052316)
chr8 (182-222)||(184552-184592)
chr8 (182-222)||(8419437-8419477)
chr8 (182-222)||(26663033-26663073)
chr8 (182-222)||(32375684-32375724)
chr8 (182-230)||(34892809-34892857)
[»] chr4 (60 HSPs)
chr4 (182-299)||(29700302-29700419)
chr4 (182-294)||(958594-958705)
chr4 (182-291)||(21470867-21470976)
chr4 (181-280)||(11494519-11494617)
chr4 (181-299)||(51426493-51426611)
chr4 (181-300)||(49572899-49573018)
chr4 (202-299)||(21472504-21472601)
chr4 (181-291)||(955756-955866)
chr4 (181-299)||(37959719-37959837)
chr4 (181-286)||(33383774-33383879)
chr4 (182-299)||(44561330-44561447)
chr4 (182-280)||(9889969-9890067)
chr4 (182-259)||(15995718-15995795)
chr4 (182-255)||(17342142-17342215)
chr4 (182-259)||(19069183-19069260)
chr4 (182-255)||(34503709-34503782)
chr4 (182-258)||(1041932-1042008)
chr4 (201-299)||(18578605-18578703)
chr4 (181-291)||(34151573-34151688)
chr4 (213-279)||(34154433-34154499)
chr4 (182-300)||(44051092-44051210)
chr4 (182-259)||(15999799-15999876)
chr4 (182-259)||(16984161-16984238)
chr4 (203-255)||(19994310-19994362)
chr4 (186-273)||(6280839-6280926)
chr4 (203-298)||(50274717-50274812)
chr4 (182-280)||(56138222-56138325)
chr4 (185-259)||(20208506-20208580)
chr4 (185-294)||(8109352-8109461)
chr4 (182-255)||(17343402-17343475)
chr4 (182-247)||(55407793-55407858)
chr4 (202-258)||(3403844-3403900)
chr4 (207-259)||(4768674-4768726)
chr4 (203-255)||(9472858-9472910)
chr4 (182-230)||(41933622-41933670)
chr4 (184-255)||(9473663-9473734)
chr4 (205-272)||(39588075-39588142)
chr4 (182-249)||(48256568-48256635)
chr4 (182-224)||(6178110-6178152)
chr4 (182-224)||(21022888-21022930)
chr4 (180-230)||(26791674-26791724)
chr4 (182-224)||(37022061-37022103)
chr4 (182-224)||(39590568-39590610)
chr4 (182-256)||(41023385-41023459)
chr4 (182-224)||(41795356-41795398)
chr4 (182-224)||(49094115-49094157)
chr4 (182-259)||(4979917-4979994)
chr4 (185-222)||(9013872-9013909)
chr4 (201-230)||(9655928-9655957)
chr4 (187-232)||(21538494-21538539)
chr4 (203-260)||(44010559-44010616)
chr4 (205-253)||(6283464-6283512)
chr4 (182-222)||(30726741-30726781)
chr4 (182-222)||(31425318-31425358)
chr4 (182-230)||(36480540-36480588)
chr4 (182-222)||(37563280-37563320)
chr4 (182-222)||(39773437-39773477)
chr4 (182-222)||(40358280-40358320)
chr4 (201-273)||(50278817-50278889)
chr4 (182-222)||(54634015-54634055)
[»] chr2 (68 HSPs)
chr2 (181-299)||(2917639-2917757)
chr2 (182-299)||(45475396-45475513)
chr2 (182-299)||(19187223-19187340)
chr2 (201-300)||(41181392-41181491)
chr2 (201-277)||(2648776-2648852)
chr2 (181-300)||(35493340-35493459)
chr2 (182-269)||(9660055-9660142)
chr2 (181-280)||(23409500-23409599)
chr2 (182-280)||(25184830-25184927)
chr2 (182-280)||(34921759-34921856)
chr2 (182-300)||(35490635-35490753)
chr2 (187-300)||(41497427-41497540)
chr2 (7-74)||(26543464-26543529)
chr2 (197-299)||(19186703-19186805)
chr2 (182-300)||(28342478-28342596)
chr2 (182-298)||(12908429-12908545)
chr2 (185-254)||(17911174-17911243)
chr2 (182-259)||(41183224-41183300)
chr2 (182-299)||(41500234-41500351)
chr2 (182-255)||(42177214-42177287)
chr2 (182-290)||(41008928-41009035)
chr2 (182-254)||(43491110-43491182)
chr2 (203-294)||(43950263-43950353)
chr2 (182-280)||(45137433-45137531)
chr2 (198-255)||(14181838-14181895)
chr2 (182-299)||(24512123-24512240)
chr2 (182-255)||(43943689-43943762)
chr2 (181-285)||(8268748-8268852)
chr2 (207-299)||(12905505-12905597)
chr2 (182-258)||(24601636-24601712)
chr2 (182-258)||(24612402-24612478)
chr2 (235-299)||(43493310-43493374)
chr2 (185-280)||(82265-82359)
chr2 (182-273)||(435325-435415)
chr2 (201-280)||(1096570-1096649)
chr2 (235-294)||(23786085-23786144)
chr2 (198-280)||(1149447-1149529)
chr2 (182-280)||(2648092-2648190)
chr2 (198-280)||(27276390-27276472)
chr2 (182-259)||(3795333-3795410)
chr2 (181-230)||(26543988-26544037)
chr2 (202-259)||(38945758-38945815)
chr2 (182-259)||(41004525-41004601)
chr2 (182-258)||(23347328-23347404)
chr2 (181-229)||(40221129-40221177)
chr2 (215-299)||(45479827-45479911)
chr2 (203-258)||(3803564-3803619)
chr2 (183-222)||(44100733-44100772)
chr2 (182-224)||(17424163-17424205)
chr2 (182-228)||(29397937-29397983)
chr2 (180-222)||(41565351-41565393)
chr2 (180-230)||(43618598-43618648)
chr2 (182-224)||(43982230-43982272)
chr2 (183-224)||(2983431-2983472)
chr2 (201-230)||(7780356-7780385)
chr2 (205-258)||(20951069-20951122)
chr2 (203-300)||(24607589-24607686)
chr2 (182-259)||(34639314-34639391)
chr2 (182-222)||(17426365-17426405)
chr2 (182-222)||(22003401-22003441)
chr2 (198-250)||(24754040-24754092)
chr2 (182-230)||(25515808-25515856)
chr2 (182-222)||(28468674-28468714)
chr2 (184-224)||(28477069-28477109)
chr2 (199-259)||(40055373-40055433)
chr2 (198-230)||(41566181-41566213)
chr2 (182-258)||(43258733-43258809)
chr2 (182-230)||(43536127-43536175)
[»] chr6 (39 HSPs)
chr6 (182-299)||(12783957-12784074)
chr6 (182-294)||(23958851-23958963)
chr6 (181-300)||(13404631-13404750)
chr6 (213-299)||(23986012-23986098)
chr6 (182-259)||(31768749-31768826)
chr6 (185-255)||(28362734-28362804)
chr6 (182-294)||(18606006-18606117)
chr6 (184-259)||(32643523-32643598)
chr6 (182-255)||(8193209-8193282)
chr6 (201-294)||(35021282-35021375)
chr6 (182-258)||(9048072-9048148)
chr6 (208-294)||(7537159-7537245)
chr6 (213-299)||(13479682-13479768)
chr6 (188-273)||(7361173-7361258)
chr6 (182-255)||(31146373-31146446)
chr6 (185-280)||(2051004-2051098)
chr6 (182-230)||(9049084-9049132)
chr6 (237-281)||(34801511-34801555)
chr6 (182-277)||(16192747-16192842)
chr6 (201-300)||(29286184-29286283)
chr6 (181-260)||(33052532-33052610)
chr6 (182-224)||(6204858-6204900)
chr6 (182-224)||(11691825-11691867)
chr6 (213-259)||(13401482-13401528)
chr6 (180-222)||(18351641-18351683)
chr6 (182-224)||(22305139-22305181)
chr6 (182-259)||(13388708-13388785)
chr6 (202-259)||(18347037-18347094)
chr6 (201-258)||(25141098-25141155)
chr6 (206-259)||(29065736-29065789)
chr6 (206-259)||(29074749-29074802)
chr6 (206-259)||(29079513-29079566)
chr6 (206-259)||(29107322-29107375)
chr6 (182-222)||(3380803-3380843)
chr6 (182-222)||(13382662-13382702)
chr6 (198-258)||(18001211-18001270)
chr6 (205-253)||(24085231-24085279)
chr6 (182-222)||(26712081-26712121)
chr6 (182-222)||(28249918-28249958)
[»] chr7 (52 HSPs)
chr7 (184-281)||(48314648-48314744)
chr7 (182-300)||(19044249-19044366)
chr7 (182-300)||(20710270-20710387)
chr7 (181-299)||(46860467-46860585)
chr7 (182-299)||(47060883-47060999)
chr7 (182-286)||(37340271-37340375)
chr7 (180-300)||(46863342-46863462)
chr7 (208-291)||(21185583-21185666)
chr7 (182-300)||(28980172-28980291)
chr7 (198-299)||(9494822-9494923)
chr7 (189-300)||(41049196-41049306)
chr7 (182-280)||(30355239-30355337)
chr7 (185-299)||(36392081-36392195)
chr7 (182-294)||(42681955-42682067)
chr7 (203-294)||(27453615-27453706)
chr7 (182-254)||(42499410-42499482)
chr7 (182-294)||(47776293-47776405)
chr7 (181-299)||(10225842-10225960)
chr7 (205-254)||(21188423-21188472)
chr7 (203-260)||(40166781-40166838)
chr7 (218-299)||(48316296-48316377)
chr7 (7-74)||(7975438-7975503)
chr7 (182-258)||(17838647-17838723)
chr7 (182-258)||(17840890-17840966)
chr7 (188-300)||(34622454-34622566)
chr7 (182-286)||(41047747-41047850)
chr7 (226-294)||(48269642-48269709)
chr7 (182-225)||(20353930-20353973)
chr7 (201-280)||(36186492-36186570)
chr7 (186-253)||(42025089-42025156)
chr7 (182-228)||(40587688-40587734)
chr7 (202-259)||(618745-618802)
chr7 (182-299)||(10705204-10705321)
chr7 (182-255)||(36394938-36395011)
chr7 (203-280)||(39460528-39460605)
chr7 (182-222)||(30791008-30791048)
chr7 (188-300)||(34623386-34623498)
chr7 (240-300)||(42684221-42684281)
chr7 (202-294)||(45361610-45361702)
chr7 (182-224)||(9367724-9367766)
chr7 (245-291)||(28112806-28112852)
chr7 (198-259)||(34742411-34742472)
chr7 (182-227)||(35606817-35606862)
chr7 (182-255)||(40142661-40142734)
chr7 (182-222)||(15070388-15070428)
chr7 (182-222)||(18105406-18105446)
chr7 (198-253)||(22640683-22640738)
chr7 (180-256)||(29592542-29592618)
chr7 (198-230)||(31324822-31324854)
chr7 (182-226)||(36781449-36781493)
chr7 (177-221)||(45763414-45763458)
chr7 (182-222)||(45767861-45767901)
[»] scaffold0618 (1 HSPs)
scaffold0618 (189-291)||(3850-3951)
[»] scaffold0341 (2 HSPs)
scaffold0341 (182-280)||(17351-17449)
scaffold0341 (180-259)||(18055-18134)
[»] scaffold0340 (1 HSPs)
scaffold0340 (182-300)||(1181-1298)
[»] scaffold1500 (1 HSPs)
scaffold1500 (182-255)||(759-832)
[»] scaffold0794 (1 HSPs)
scaffold0794 (182-259)||(5268-5344)
[»] scaffold0012 (1 HSPs)
scaffold0012 (203-280)||(232523-232600)
[»] scaffold0361 (1 HSPs)
scaffold0361 (182-259)||(4400-4477)
[»] scaffold0360 (1 HSPs)
scaffold0360 (182-291)||(7304-7413)
[»] scaffold0116 (2 HSPs)
scaffold0116 (182-259)||(15955-16032)
scaffold0116 (203-280)||(11276-11353)
[»] scaffold0494 (2 HSPs)
scaffold0494 (182-280)||(806-904)
scaffold0494 (182-222)||(5364-5404)
[»] scaffold0169 (1 HSPs)
scaffold0169 (201-247)||(1676-1722)
[»] scaffold0219 (2 HSPs)
scaffold0219 (182-255)||(20112-20185)
scaffold0219 (204-254)||(15704-15754)
[»] scaffold0201 (1 HSPs)
scaffold0201 (182-259)||(22399-22476)
[»] scaffold1379 (1 HSPs)
scaffold1379 (198-280)||(450-532)
[»] scaffold0388 (1 HSPs)
scaffold0388 (213-291)||(11741-11819)
[»] scaffold0260 (1 HSPs)
scaffold0260 (202-260)||(11775-11833)
[»] scaffold0057 (1 HSPs)
scaffold0057 (181-251)||(23226-23296)
[»] scaffold0744 (1 HSPs)
scaffold0744 (182-222)||(423-463)
[»] scaffold0634 (1 HSPs)
scaffold0634 (182-222)||(7451-7491)
[»] scaffold0155 (1 HSPs)
scaffold0155 (198-230)||(12960-12992)
[»] scaffold0092 (1 HSPs)
scaffold0092 (182-230)||(54590-54638)
[»] scaffold0038 (1 HSPs)
scaffold0038 (182-222)||(50080-50120)
[»] scaffold0019 (1 HSPs)
scaffold0019 (201-259)||(134333-134388)


Alignment Details
Target: chr1 (Bit Score: 72; Significance: 9e-33; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 46141856 - 46141737
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||||||||||||||  || ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| | ||||| |||||||||||    
T  46141856 ttcggcagttaactaccgatgttttcctcggcagttaactgcagccggttattgaattcctcggcagttaactgccgagagggcaaaatcgtattttact 46141757  T
Q  281 tatgtgtctcagccctatgc 300  Q
    | |||  ||||||| |||||    
T  46141756 tgtgtacctcagccttatgc 46141737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 181 - 293
Target Start/End: Original strand, 6437538 - 6437650
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||||||| ||||||  ||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||| | ||||| |||||||||||    
T  6437538 ttcggcagataactaccgaggttttccttggtagttaactgcagtcgattattgacttcctcggcagttaactgccgagagggcaaaagcgtattttact 6437637  T
Q  281 tatgtgtctcagc 293  Q
    | |||| ||||||    
T  6437638 tgtgtgcctcagc 6437650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 182 - 294
Target Start/End: Complemental strand, 46973276 - 46973165
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||| |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||| ||  | ||||| ||||||||||||    
T  46973276 tcggcagttaactat-gaggttttcctcggcagttaactgcagccggtttttgaattcctcggcagttaactgccaagggggcaaaatcgtattttactt 46973178  T
Q  282 atgtgtctcagcc 294  Q
     ||||||||||||    
T  46973177 gtgtgtctcagcc 46973165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 181 - 294
Target Start/End: Original strand, 41804032 - 41804145
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||| ||||||||||  |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||   | ||||| |||||||||||    
T  41804032 ttcgacagttaactaccgaggttttcctcggcagttaactgcagtcggtttttgaattcctcggcagttaactgccgaaggggcaaaagcgtattttact 41804131  T
Q  281 tatgtgtctcagcc 294  Q
    | |||| |||||||    
T  41804132 tgtgtgcctcagcc 41804145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 185 - 294
Target Start/End: Original strand, 23276111 - 23276220
Alignment:
Q  185 gcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatg 284  Q
    |||||||||||| |||||||||||||| ||||||||| || ||| | || |||||||| ||||||||||||||||  | |||||||||||||||||  ||    
T  23276111 gcagttaactatcgaggttttcctcggcagttaactgtagccggatttttaattcctcagcagttaactgccgagggggcaaaaacgtattttactcgtg 23276210  T
Q  285 tgtctcagcc 294  Q
    | ||||||||    
T  23276211 tttctcagcc 23276220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 35258872 - 35258989
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatga-caaaaacgtattttact 280  Q
    |||||||||||| || ||||||||||||||  ||||||||||| ||| | || |||||||||||||||||||||||| |||| ||   ||||||||||||    
T  35258872 tcggcagttaaccatcgaggttttcctcgggtgttaactgcagccggatttttaattcctcggcagttaactgccga-atgagcatttacgtattttact 35258970  T
Q  281 tatgtgtctcagccctatg 299  Q
    | |||||||||||| ||||    
T  35258971 tgtgtgtctcagccttatg 35258989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 269
Target Start/End: Complemental strand, 52802205 - 52802116
Alignment:
Q  180 cttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaa 269  Q
    ||||||||||||||||  |||||||||||||| |||||||||||| ||| | |  |||||||||||||||||||||||||| | ||||||    
T  52802205 cttcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagagggcaaaaa 52802116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 292
Target Start/End: Complemental strand, 29435043 - 29434936
Alignment:
Q  185 gcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatg 284  Q
    |||||||||||  |||||| || |||| ||||||||||||||||||||||||||| |||  ||||||||||| ||| |  |||||||||||||| |  ||    
T  29435043 gcagttaactaccgaggttgtcatcggaagttaactgcagtcggttattgaattcttcgaaagttaactgccaagagggtaaaaacgtattttattcgtg 29434944  T
Q  285 tgtctcag 292  Q
    ||||||||    
T  29434943 tgtctcag 29434936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 299
Target Start/End: Complemental strand, 19054101 - 19054015
Alignment:
Q  213 agttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagccctatg 299  Q
    |||||||||||| ||||| ||||||||||||||||||||||| ||||  | |||||||||||||||||  ||| |||||||| ||||    
T  19054101 agttaactgcagccggtttttgaattcctcggcagttaactgtcgagggggcaaaaacgtattttactcgtgtttctcagccttatg 19054015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 186 - 280
Target Start/End: Original strand, 49927517 - 49927611
Alignment:
Q  186 cagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||  |||||||| ||||| ||||||||  || ||||| || ||||| |||||||||||||||||||  |||||||||||||||||||    
T  49927517 cagttaactaccgaggtttttctcggcagttaactatagccggtttttaaattcttcggcagttaactgccgaggggacaaaaacgtattttact 49927611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 3941150 - 3941223
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    ||||||||||||||  || |||||||||||||||||||||||| | |||  |||||||||||||||||||||||    
T  3941150 tcggcagttaactaccgaagttttcctcggtagttaactgcagccagtttatgaattcctcggcagttaactgc 3941223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 36076558 - 36076674
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||| ||||  |||||||||||||| |||||||||||| ||||| |||||||||||||  ||||||| |||| | |   ||||||||||||||||    
T  36076558 tcggcagtttactagcgaggttttcctcggcagttaactgcagccggtttttgaattcctcggtggttaactaccga-aggggtaaaacgtattttactt 36076656  T
Q  282 atgtgtctcagccctatg 299  Q
     ||| |||||||| ||||    
T  36076657 gtgtttctcagccttatg 36076674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 281
Target Start/End: Original strand, 18975119 - 18975219
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||||||||||||||  || ||||||||| | |||||||||||  | |||||| ||||||||| |||||||| ||||||  | |||||||||||||||||    
T  18975119 ttcggcagttaactaccgaagttttcctctgcagttaactgcaaccagttattaaattcctcgacagttaaccgccgagggggcaaaaacgtattttact 18975218  T
Q  281 t 281  Q
    |    
T  18975219 t 18975219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 292
Target Start/End: Original strand, 19499115 - 19499220
Alignment:
Q  185 gcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatg 284  Q
    ||||||||| | ||||||||||||||| |||||||||||| ||  | || |||| ||| ||||||||||| ||||  | |||||||||||||||||| ||    
T  19499115 gcagttaacgactgaggttttcctcggcagttaactgcagccgaattttaaatttctcagcagttaactgtcgag--ggcaaaaacgtattttacttgtg 19499212  T
Q  285 tgtctcag 292  Q
    ||||||||    
T  19499213 tgtctcag 19499220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 294
Target Start/End: Complemental strand, 35521654 - 35521575
Alignment:
Q  215 ttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagcc 294  Q
    |||||||||| ||||| || | |||||||||||||||||||||||| | ||||| |||||||||||| |||| |||||||    
T  35521654 ttaactgcagccggttttttatttcctcggcagttaactgccgagagggcaaaatcgtattttacttgtgtgcctcagcc 35521575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 280
Target Start/End: Original strand, 6562161 - 6562259
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||||||  |||| ||||||||| |||||||||||| ||| | |  |||||||||||||||||||||||||  |  |||| |||||||||||    
T  6562161 tcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggtaaaatcgtattttact 6562259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 280
Target Start/End: Original strand, 13178132 - 13178230
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||||| | |||||||||||| | ||||||||||||  |||| || |||| ||| ||||||||||||||||    |||||||||||||||||    
T  13178132 tcggcagttaactctcgaggttttcctcagcagttaactgcagctggtttttaaatttctcagcagttaactgccgagggagcaaaaacgtattttact 13178230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 13173908 - 13173792
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    |||||||||||||    |||||||||||||  ||||||||||| ||||| ||||||||| | ||||||||||||||||  | |||||  |||||||||||    
T  13173908 tcggcagttaactgccaaggttttcctcggctgttaactgcagccggtttttgaattcc-cagcagttaactgccgagggggcaaaatagtattttactt 13173810  T
Q  282 atgtgtctcagccctatg 299  Q
     |||| ||||||| ||||    
T  13173809 gtgtgcctcagccttatg 13173792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 21944380 - 21944497
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    |||| |||||||||| |||||||||||||| |  ||||||||| ||||| || |||| |||| |||||| ||  ||||  || |||||||||||||| ||    
T  21944380 tcggtagttaactatcgaggttttcctcggcaactaactgcagccggtttttaaatttctcgacagttatctatcgaggggataaaaacgtattttattt 21944479  T
Q  282 atgtgtctcagccctatg 299  Q
    ||||||| ||||| ||||    
T  21944480 atgtgtcccagccttatg 21944497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 23359349 - 23359426
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    ||||||||| ||||  ||||||||||||||||||||||||||| ||| | |  |||||||||||| ||||||||||||    
T  23359349 tcggcagtttactaccgaggttttcctcggtagttaactgcagccggatttcaaattcctcggcaattaactgccgag 23359426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 36908627 - 36908542
Alignment:
Q  206 cctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctca 291  Q
    |||||| |||||||||||| ||||| |||||||| ||| |||||||||||||||  | |||||| ||||||||||| |||| ||||    
T  36908627 cctcggcagttaactgcagccggtttttgaattcttcgacagttaactgccgaggaggcaaaaatgtattttacttgtgtgcctca 36908542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 44470011 - 44470088
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    |||||||||||||   |||||||||||||| |||||||||||| ||| | |  |||||||||||||||||||||||||    
T  44470011 tcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgag 44470088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 291
Target Start/End: Complemental strand, 26633601 - 26633494
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||||||||||||||  |||||||||||||| |||||||||||  ||||| |||||||| |||| ||||||   |||||  | ||||| |||||||||||    
T  26633601 ttcggcagttaactaccgaggttttcctcggcagttaactgcaaccggtttttgaattcttcggtagttaa---ccgagggggcaaaagcgtattttact 26633505  T
Q  281 tatgtgtctca 291  Q
    | |||| ||||    
T  26633504 tgtgtgcctca 26633494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 294
Target Start/End: Complemental strand, 27485112 - 27485020
Alignment:
Q  202 ttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagcc 294  Q
    |||| ||||| |||||||||||| ||| | || ||||||| |||||||||||||||||  | |||||||||||||||||  ||| ||||||||    
T  27485112 tttttctcggcagttaactgcagccggatttttaattcctaggcagttaactgccgagggggcaaaaacgtattttactcgtgtttctcagcc 27485020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 273
Target Start/End: Original strand, 29438019 - 29438111
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgta 273  Q
    |||||||||||| ||  ||||||||||||||||||||||||||| ||||| || |||   || ||||||||||||||||  | ||||||||||    
T  29438019 ttcggcagttaattaccgaggttttcctcggtagttaactgcagccggttttttaatatttctgcagttaactgccgagggggcaaaaacgta 29438111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 294
Target Start/End: Original strand, 48751410 - 48751522
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  |||||||||||||| | |||||||||| ||| | || ||||||||||||||| | |||||||  |  |||| |||||||||||     
T  48751410 tcggcagttaactaccgaggttttcctcggcaattaactgcagccggatttttaattcctcggcagttcagtgccgagggggtaaaatcgtattttacta 48751509  T
Q  282 atgtgtctcagcc 294  Q
     ||| ||||||||    
T  48751510 gtgtttctcagcc 48751522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 280
Target Start/End: Complemental strand, 11183255 - 11183161
Alignment:
Q  186 cagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||  |||||||||||||| |||||||||||| ||| | || |||||||| ||||||||||| | ||    |||||||||||||||||    
T  11183255 cagttaactaccgaggttttcctcggcagttaactgcagccggatttttaattcctcagcagttaactgtcaagggagcaaaaacgtattttact 11183161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 299
Target Start/End: Original strand, 35527044 - 35527130
Alignment:
Q  213 agttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagccctatg 299  Q
    |||||||||||| | ||| |||| ||| |||||| ||||||||| ||| | |||||||||||||||||| |||| ||||||| ||||    
T  35527044 agttaactgcagcctgtttttgatttcttcggcaattaactgccaagaaggcaaaaacgtattttacttgtgtgcctcagccttatg 35527130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 4516079 - 4516030
Alignment:
Q  207 ctcggtagttaactgcagtcggttattgaattcctcggcagttaactgcc 256  Q
    ||||| |||||||||||| ||||| |||||||||||||||||||||||||    
T  4516079 ctcggcagttaactgcagccggtttttgaattcctcggcagttaactgcc 4516030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 6557988 - 6557911
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    ||||||||||||||  ||| |||||||||| |||||||||||| ||  | |  |||||||||||||||||||||||||    
T  6557988 tcggcagttaactaccgagattttcctcggcagttaactgcagccgaatttcaaattcctcggcagttaactgccgag 6557911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 299
Target Start/End: Complemental strand, 13972119 - 13972020
Alignment:
Q  198 gaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagcccta 297  Q
    ||||||||||||||  ||||||||||| | ||| || |||||||||||||| |||||||||   | |||||||||||||||||| ||| |||||||| ||    
T  13972119 gaggttttcctcggctgttaactgcagccagttttt-aattcctcggcagt-aactgccgaaggggcaaaaacgtattttacttgtgtttctcagcctta 13972022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 15047355 - 15047278
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    ||||||||||||||  ||||  |||||||| |||||||||||| ||| | |  |||||||||||||||||||||||||    
T  15047355 tcggcagttaactaccgaggaattcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgag 15047278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 45943726 - 45943799
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    ||||||||||||||  || |||||||||||||||||||| ||| |||||  ||||||||||| || ||||||||    
T  45943726 tcggcagttaactaccgaagttttcctcggtagttaactacagccggtttatgaattcctcgacaattaactgc 45943799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 259
Target Start/End: Original strand, 6562865 - 6562944
Alignment:
Q  180 cttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaa-ttcctcggcagttaactgccgag 259  Q
    ||||||||||||||| | ||||||||| ||||||||||||||||| ||||| |||||    ||||||||||||||||||||    
T  6562865 cttcggcagttaactgtcgaggttttcttcggtagttaactgcagccggtt-ttgaaccgtctcggcagttaactgccgag 6562944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 294
Target Start/End: Original strand, 8460097 - 8460208
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  ||| ||||||| || |||||||||||| || || |  ||||||||||  ||||||| |||||  ||||||||||||| |||||     
T  8460097 tcggcagttaactaccgagattttccttggcagttaactgcagccgatt-tcaaattcctcggttgttaactaccgaggggacaaaaacgtatattactc 8460195  T
Q  282 atgtgtctcagcc 294  Q
    ||||| |||||||    
T  8460196 atgtgcctcagcc 8460208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 13147565 - 13147521
Alignment:
Q  186 cagttaactattgaggttttcctcggtagttaactgcagtcggtt 230  Q
    ||||||||| | |||||||||||||||||||||||||||||||||    
T  13147565 cagttaactgtcgaggttttcctcggtagttaactgcagtcggtt 13147521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 186 - 286
Target Start/End: Complemental strand, 29261483 - 29261383
Alignment:
Q  186 cagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgt 285  Q
    |||||||||| |||||||||| |||| |||||| ||||| || || |  |||| |||  |||||||||||||||  | |||||||||||||||||| |||    
T  29261483 cagttaactactgaggttttcttcggcagttaattgcagccgattttacaatttctctacagttaactgccgaggaggcaaaaacgtattttacttctgt 29261384  T
Q  286 g 286  Q
    |    
T  29261383 g 29261383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 38690004 - 38689901
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  ||||||||||| || |||||||||||| ||||| | |||||||||| || |||||| |||||  |  |||| |||||||||||     
T  38690004 tcggcagttaactaccgaggttttccttggcagttaactgcagccggtt-tcgaattcctcgacatttaactaccgagggggtaaaagcgtattttactc 38689906  T
Q  282 atgtg 286  Q
    |||||    
T  38689905 atgtg 38689901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 46044747 - 46044799
Alignment:
Q  203 tttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    |||||||||||||||||||||| |||||  ||||||| |||||||||||||||    
T  46044747 tttcctcggtagttaactgcagccggtttatgaattcttcggcagttaactgc 46044799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 255
Target Start/End: Complemental strand, 1167637 - 1167562
Alignment:
Q  180 cttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    |||||| ||||||||   ||||||||||||| ||||||||||||||||||| |    |||||||||||||||||||    
T  1167637 cttcggtagttaactgccgaggttttcctcgatagttaactgcagtcggttttacttttcctcggcagttaactgc 1167562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 280
Target Start/End: Complemental strand, 8459038 - 8458960
Alignment:
Q  201 gttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||| |||||||||||||||||| |  |||||| |||||||||||| | |||  || ||||||||||||||||    
T  8459038 gttttcctcggcagttaactgcagtcggtt-tcaaattccacggcagttaacttctgaggggataaaaacgtattttact 8458960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 280
Target Start/End: Complemental strand, 23272891 - 23272824
Alignment:
Q  213 agttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||||  || |||| |||||||||||||||||||| ||||  || ||||||||||||||||    
T  23272891 agttaactgcagctggatatttaattcctcggcagttaactggcgaggggaaaaaaacgtattttact 23272824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 247
Target Start/End: Complemental strand, 36072443 - 36072377
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcag 247  Q
    |||||||||||||||  |||||||||||||| |||||||||||| || || || |||| ||||||||    
T  36072443 ttcggcagttaactaccgaggttttcctcggcagttaactgcagccgatttttcaatttctcggcag 36072377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 44336322 - 44336249
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    ||||||||||||||  |||||||||||||| |||||||||||| ||  | |  ||||||||| |||||||||||    
T  44336322 tcggcagttaactaccgaggttttcctcggcagttaactgcagccgaatttctaattcctcgacagttaactgc 44336249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 46043579 - 46043506
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    ||||||||||||||  || |||||||||||||||||| ||||| |  ||  |||||||||||| ||||||||||    
T  46043579 tcggcagttaactaccgaagttttcctcggtagttaattgcagccaatttatgaattcctcggtagttaactgc 46043506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 51289960 - 51290037
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    ||||||| ||||||  |||||||||||||| |||||||||||  ||| | || |||||||| | ||||||||||||||    
T  51289960 tcggcagctaactaccgaggttttcctcggcagttaactgcaaccggatttttaattcctcagtagttaactgccgag 51290037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 22345333 - 22345258
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccga 258  Q
    ||||||||||||||  |||| |||  |||| |||||||||||| ||||| |  ||||||||||||||||||||||||    
T  22345333 tcggcagttaactaccgaggattttttcggcagttaactgcagccggtt-tcaaattcctcggcagttaactgccga 22345258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 24364725 - 24364801
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccga 258  Q
    ||||||||||||| | |||||||||||| |||||||||||||  || || |  |  |||||||||||||||||||||    
T  24364725 tcggcagttaactgtcgaggttttcctcagtagttaactgcaaccgattttaaacctcctcggcagttaactgccga 24364801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 27115842 - 27115898
Alignment:
Q  201 gttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccg 257  Q
    |||||| |||| |||||||||||| ||||| || |||||||||||| ||||||||||    
T  27115842 gttttcttcggcagttaactgcagccggtttttaaattcctcggcaattaactgccg 27115898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 29424453 - 29424405
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggtt 230  Q
    ||||||||||||||  || |||||||||||||||||||||||| |||||    
T  29424453 tcggcagttaactaccgaagttttcctcggtagttaactgcagccggtt 29424405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 5845504 - 5845559
Alignment:
Q  198 gaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaact 253  Q
    ||||||||||||||||||||||||||| ||||| |    |||||||||||||||||    
T  5845504 gaggttttcctcggtagttaactgcagccggttttatttttcctcggcagttaact 5845559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 49924930 - 49924811
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||||||   || | ||||||||| ||||||||| || ||||| |||||||  ||||||||||| ||||||   | ||||||||||  |||||    
T  49924930 ttcggcagttaactcccgatgatttcctcggcagttaactgtagccggtttttgaatttttcggcagttaattgccgaaggggcaaaaacgtaaattact 49924831  T
Q  281 tatgtgtctcagccctatgc 300  Q
      |||| ||||||| |||||    
T  49924830 cgtgtgcctcagccttatgc 49924811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 256
Target Start/End: Original strand, 51337544 - 51337587
Alignment:
Q  213 agttaactgcagtcggttattgaattcctcggcagttaactgcc 256  Q
    |||||||||||| ||||| || ||||||||||||||||||||||    
T  51337544 agttaactgcagccggttttttaattcctcggcagttaactgcc 51337587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 13636122 - 13636164
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    ||||||||||||||  |||||||||||||| ||||||||||||    
T  13636122 tcggcagttaactaccgaggttttcctcggcagttaactgcag 13636164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 20349510 - 20349452
Alignment:
Q  202 ttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgaga 260  Q
    |||||||||| |||||||||||| ||| | |  |||||||||| |||||||||||||||    
T  20349510 ttttcctcggcagttaactgcagccggatttcaaattcctcggtagttaactgccgaga 20349452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 280
Target Start/End: Complemental strand, 30905820 - 30905746
Alignment:
Q  206 cctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||||| |||||||||||| ||| | |  |||| ||||||||||||||||||||  || |||| |||||||||||    
T  30905820 cctcggcagttaactgcagccggatttcaaatttctcggcagttaactgccgaggggataaaatcgtattttact 30905746  T

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Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 30910022 - 30910080
Alignment:
Q  201 gttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    ||||||||||| |||||||||||| ||| | |  ||||||||| |||||||||||||||    
T  30910022 gttttcctcggcagttaactgcagccggatttcaaattcctcgacagttaactgccgag 30910080  T

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Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 46217318 - 46217360
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    ||||||||||||||  || ||||||||||||||||||||||||    
T  46217318 tcggcagttaactaccgaagttttcctcggtagttaactgcag 46217360  T

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Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 47586236 - 47586282
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcg 227  Q
    ||||||||||||||   |||||||| |||||||||||||||||||||    
T  47586236 ttcggcagttaactgccgaggtttttctcggtagttaactgcagtcg 47586282  T

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Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 280
Target Start/End: Complemental strand, 5077993 - 5077916
Alignment:
Q  203 tttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||| |||||||||||||||| | |  |||| ||| ||||||||||||||||  |  |||| |||||||||||    
T  5077993 tttcctcggcagttaactgcagtcggatttcaaatttctcagcagttaactgccgagggggtaaaatcgtattttact 5077916  T

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Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 29425336 - 29425377
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgca 223  Q
    ||||||||||||||  || |||||||||||||||||||||||    
T  29425336 tcggcagttaactaccgaagttttcctcggtagttaactgca 29425377  T

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Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 36911703 - 36911769
Alignment:
Q  215 ttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttat 283  Q
    |||||| |||||| || |||||||| ||||||||  |||||||||   |||||||||||||||||||||    
T  36911703 ttaactacagtcgatttttgaattcttcggcagt--actgccgaggaaacaaaaacgtattttacttat 36911769  T

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Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 41453891 - 41453834
Alignment:
Q  202 ttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    |||||||||| |||||||||||| ||| | |  ||||||||||||||||||| |||||    
T  41453891 ttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactaccgag 41453834  T

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Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 42572797 - 42572760
Alignment:
Q  185 gcagttaactattgaggttttcctcggtagttaactgc 222  Q
    |||||||||| | |||||||||||||||||||||||||    
T  42572797 gcagttaactgtcgaggttttcctcggtagttaactgc 42572760  T

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Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 3728808 - 3728768
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  3728808 tcggcagttaactaccgaggttttcctcggcagttaactgc 3728768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 3944047 - 3944007
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  3944047 tcggcagttaactaccgaggttttcctcggcagttaactgc 3944007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 3993843 - 3993883
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  3993843 tcggcagttaactaccgaggttttcctcggcagttaactgc 3993883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 8548669 - 8548709
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  8548669 tcggcagttaactaccgaggttttcctcggcagttaactgc 8548709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 13633944 - 13633904
Alignment:
Q  180 cttcggcagttaactattgaggttttcctcggtagttaact 220  Q
    ||||||||||||||||  |||||||||||||| ||||||||    
T  13633944 cttcggcagttaactaccgaggttttcctcggcagttaact 13633904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 13761044 - 13761092
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggtt 230  Q
    ||||||||||||| | || ||||||||||| |||||||||||| |||||    
T  13761044 tcggcagttaactgtcgaagttttcctcggcagttaactgcagccggtt 13761092  T

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Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 22524199 - 22524159
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  22524199 tcggcagttaactaccgaggttttcctcgggagttaactgc 22524159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 35255300 - 35255348
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggtt 230  Q
    |||| |||| ||| |||| |||||| |||||||||||||||||||||||    
T  35255300 tcggtagtttactgttgaagttttcgtcggtagttaactgcagtcggtt 35255348  T

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Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 49502796 - 49502836
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    |||||||||||||  ||| ||||||||||||||||||||||    
T  49502796 tcggcagttaactgctgaagttttcctcggtagttaactgc 49502836  T

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Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 3603147 - 3603266
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||||||||||||||  |||||||||||||| |||||||||||| | |||||||||||| |||||||||||||| ||||    |||||||||||||||||    
T  3603147 ttcggcagttaactaccgaggttttcctcggaagttaactgcagccagttattgaattcttcggcagttaactgtcgagggagcaaaaacgtattttact 3603246  T
Q  281 tatgtgtctcagccctatgc 300  Q
    |||||| ||||||| |||||    
T  3603247 tatgtgcctcagccttatgc 3603266  T

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Target: chr5; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 41201802 - 41201684
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||| ||||||||||  |||||||||||||| |||||||||||| |||||||||||||||||| || |||| || ||||| ||||||| |||||||||||    
T  41201802 ttcgacagttaactaccgaggttttcctcggcagttaactgcagccggttattgaattcctcgacaattaattgtcgagaggacaaaatcgtattttact 41201703  T
Q  281 tatgtgtctcagccctatg 299  Q
      |||| ||||||| ||||    
T  41201702 cgtgtgcctcagccttatg 41201684  T

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Target: chr5; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 18310047 - 18310139
Alignment:
Q  208 tcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagccctatgc 300  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||| |||  | |||||||||||||||||| |||| ||||||| |||||    
T  18310047 tcggcagttaactgcagtcggttattgaattcctcgacagttaactgctgaggaggcaaaaacgtattttacttgtgtgcctcagccttatgc 18310139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 294
Target Start/End: Original strand, 18538335 - 18538447
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  || ||||||||||| |||||||||||| ||||| |||||||||||| || ||||||||||||  | ||||| ||||||||||||    
T  18538335 tcggcagttaactaccgaagttttcctcggcagttaactgcagccggtttttgaattcctcgacaattaactgccgagggggcaaaatcgtattttactt 18538434  T
Q  282 atgtgtctcagcc 294  Q
     |||| |||||||    
T  18538435 gtgtgcctcagcc 18538447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 20200147 - 20200266
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||||||||||||||  || ||||||||||| ||||||||||||| |||||||||||| || | ||||||||||||||   | ||||||||||||||| |    
T  20200147 ttcggcagttaactacagatgttttcctcggcagttaactgcagttggttattgaatttcttgacagttaactgccgatggggcaaaaacgtattttatt 20200246  T
Q  281 tatgtgtctcagccctatgc 300  Q
    | |||| ||||||| |||||    
T  20200247 tgtgtgcctcagccttatgc 20200266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 290
Target Start/End: Complemental strand, 24053234 - 24053145
Alignment:
Q  201 gttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctc 290  Q
    ||||| ||||| |||||||||||| ||||| ||||||| ||||||| |||||||||||||  |||||||||||||||| |||||||||||    
T  24053234 gtttttctcggcagttaactgcagacggtttttgaattactcggcatttaactgccgagagaacaaaaacgtattttatttatgtgtctc 24053145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 38968168 - 38968051
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatga-caaaaacgtattttact 280  Q
    ||||||||||||||| |||||||||||||| |||||||||||| ||| | ||  ||||||||| |||||||| |||| | || |||||||||||||||||    
T  38968168 tcggcagttaactatcgaggttttcctcggcagttaactgcagccggattttttattcctcggtagttaactaccga-aggatcaaaaacgtattttact 38968070  T
Q  281 tatgtgtctcagccctatg 299  Q
    ||||| | |||||| ||||    
T  38968069 tatgtttttcagccttatg 38968051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 185 - 294
Target Start/End: Original strand, 17966889 - 17966998
Alignment:
Q  185 gcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatg 284  Q
    |||||||||||  ||| ||||||||||||||||||||||||||| | || |||| ||||||||||||||||||||  |  |||| |||||||||||  ||    
T  17966889 gcagttaactaccgagattttcctcggtagttaactgcagtcggatttttaatttctcggcagttaactgccgagggggtaaaatcgtattttactagtg 17966988  T
Q  285 tgtctcagcc 294  Q
    | ||||||||    
T  17966989 tttctcagcc 17966998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 20192426 - 20192309
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    |||||| |||||||| || ||||||||||| |||||||||||| || ||||||||||| || ||||||||||| |||   | ||||| ||||||||||||    
T  20192426 tcggcatttaactatcgaagttttcctcggcagttaactgcagccgattattgaattcttcagcagttaactgacgaaggggcaaaatcgtattttactt 20192327  T
Q  282 atgtgtctcagccctatg 299  Q
     |||| ||||||| ||||    
T  20192326 gtgtgcctcagccttatg 20192309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 13837972 - 13837907
Alignment:
Q  7 gtttggaggtggattttgttgctcttcttctgttacttcttgcaaagtgtagcacagtgtttgatttg 74  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||| |||||  ||||||||||||||    
T  13837972 gtttggatgtggattttgttgctcttcttctgttacctcttgcaaaatgtag--cagtgtttgatttg 13837907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 281
Target Start/End: Original strand, 25499886 - 25499986
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||| ||||||| | ||||||||||||| ||||||| |||  ||||| ||||||||||||  ||||||||||||||  | ||||| |||||||||||    
T  25499886 ttcggcacttaactactaaggttttcctcggcagttaaccgcaaccggtttttgaattcctcgatagttaactgccgagggggcaaaagcgtattttact 25499985  T
Q  281 t 281  Q
    |    
T  25499986 t 25499986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 34122597 - 34122493
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  ||| |||||||||| |||||||||||| ||| | |  ||||||||||||||||||||||||   | ||||| |||||||||||     
T  34122597 tcggcagttaactaccgagcttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaaggggcaaaatcgtattttacta 34122498  T
Q  282 atgtg 286  Q
    |||||    
T  34122497 atgtg 34122493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 291
Target Start/End: Complemental strand, 1398678 - 1398568
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatga-caaaaacgtattttac 279  Q
    |||| ||||||||||  ||||||||||| ||  ||||||||||  ||||||||||||||||||||||||||||| ||| | || |||||  |||||||||    
T  1398678 ttcgacagttaactaccgaggttttccttggctgttaactgcaaccggttattgaattcctcggcagttaactgtcga-aggagcaaaagtgtattttac 1398580  T
Q  280 ttatgtgtctca 291  Q
    || |||||||||    
T  1398579 ttctgtgtctca 1398568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 182 - 280
Target Start/End: Complemental strand, 18307327 - 18307229
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatga-caaaaacgtattttact 280  Q
    ||||||||||||||  |||||||||||||| |||||||| ||| || || || ||||||||| |||||||||||||| | || |||||||||||||||||    
T  18307327 tcggcagttaactaccgaggttttcctcggcagttaactacagccgattttttaattcctcgacagttaactgccga-aggagcaaaaacgtattttact 18307229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 3600410 - 3600300
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttatt-gaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||| ||||||||| ||||||||||| || ||||||||||||  |||||||  ||||  |||||||||||||||||||  | ||||||| |||||||||    
T  3600410 tcggctgttaactatcgaggttttccttggcagttaactgcagctggttattataattattcggcagttaactgccgagggggcaaaaacatattttact 3600311  T
Q  281 tatgtgtctca 291  Q
    | |||| ||||    
T  3600310 tgtgtggctca 3600300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 280
Target Start/End: Complemental strand, 33993353 - 33993255
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||||||  |||||||| | ||| |||||||| ||| ||||| |||||||  ||||||||||||| |||||  | |||||||||||||||||    
T  33993353 tcggcagttaactaccgaggtttttcacggcagttaactacagccggtttttgaatttttcggcagttaacttccgagggggcaaaaacgtattttact 33993255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 25890067 - 25889994
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    ||||||||| ||||  ||||||||||||||||||||||||||||||| | |  ||||||||||||||| |||||    
T  25890067 tcggcagtttactaccgaggttttcctcggtagttaactgcagtcggatttcaaattcctcggcagtttactgc 25889994  T

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Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 254
Target Start/End: Complemental strand, 34682331 - 34682258
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactg 254  Q
    ||||| ||||||||   |||||||||||||| |||||||||||| ||||| |||||||||||| ||||||||||    
T  34682331 ttcggtagttaactcccgaggttttcctcggcagttaactgcagccggtttttgaattcctcgacagttaactg 34682258  T

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Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 281
Target Start/End: Original strand, 8702202 - 8702297
Alignment:
Q  186 cagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||  |||||||||||| | |||||||||||||| | | || |||||||||||||||||||| ||||    ||||| ||||||||||||    
T  8702202 cagttaactaccgaggttttcctcagcagttaactgcagtcagatttttaattcctcggcagttaactgtcgagggagcaaaatcgtattttactt 8702297  T

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Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 259
Target Start/End: Original strand, 28388517 - 28388596
Alignment:
Q  180 cttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||  || | |  ||||||||||||| |||||||||||    
T  28388517 cttcggcagttaactaccgaggttttcctcggcagttaactgcagctggatttcaaattcctcggcagctaactgccgag 28388596  T

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Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 182 - 280
Target Start/End: Complemental strand, 17965922 - 17965824
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||||| |||||||  || ||||||||||| |||||||||||||||  | || ||||||||| || ||||||||||||  || |||| |||||||||||    
T  17965922 tcggcaattaactaccgatgttttcctcggcagttaactgcagtcgaatttttaattcctcgacaattaactgccgaggggataaaatcgtattttact 17965824  T

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Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 182 - 280
Target Start/End: Complemental strand, 25877694 - 25877597
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||||||  || ||||||||||| |||||| ||||| ||||| | ||||||||||||| |||| ||||||  ||  ||||||||||||||||    
T  25877694 tcggcagttaactaccgaagttttcctcggcagttaattgcagccggtt-tcgaattcctcggcatttaattgccgaagtggtaaaaacgtattttact 25877597  T

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Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 182 - 280
Target Start/End: Original strand, 34123935 - 34124033
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||||||  ||||||||||| || |||||||||||| ||| | |  |||| |||| |||||||||||||||  | ||||| |||||||||||    
T  34123935 tcggcagttaactaccgaggttttccttggcagttaactgcagccggatttcaaatttctcgacagttaactgccgagggggcaaaatcgtattttact 34124033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 1035257 - 1035180
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    ||||||||||||||| |||| ||||||||||| |||||||||| ||    |  |||||||||||||||||||||||||    
T  1035257 tcggcagttaactatcgaggatttcctcggtaattaactgcagccgaaattcaaattcctcggcagttaactgccgag 1035180  T

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Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 33995148 - 33995257
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    |||||||||||||   |||||||||||||| |||||| ||||  || || ||||||| ||||||||||||||| ||||  || ||||  |||||||||||    
T  33995148 tcggcagttaactcccgaggttttcctcggcagttaattgcatccgatttttgaatttctcggcagttaactgtcgaggggataaaattgtattttactt 33995247  T
Q  282 atgtgtctca 291  Q
     |||| ||||    
T  33995248 gtgtgcctca 33995257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 39742648 - 39742575
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    |||| ||||||||  ||||||||||||||| |||||||||||||||||| |    |||||||||||||||||||    
T  39742648 tcggtagttaactgctgaggttttcctcggcagttaactgcagtcggttttatttttcctcggcagttaactgc 39742575  T

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Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 273
Target Start/End: Original strand, 7800990 - 7801078
Alignment:
Q  185 gcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgta 273  Q
    |||||||||||  || | ||||||||||| |||||||||| || || ||||||||| || ||||||||| |||||  ||||||||||||    
T  7800990 gcagttaactaccgatgatttcctcggtaattaactgcagccgatttttgaattccacgacagttaactaccgagtggacaaaaacgta 7801078  T

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Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 19228671 - 19228758
Alignment:
Q  207 ctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagcc 294  Q
    ||||| |||||||||||  ||||| || ||||| |||||||||||||||||||  | ||   ||||||||||||| ||||||||||||    
T  19228671 ctcggcagttaactgcatccggttttttaattcatcggcagttaactgccgagggggcatttacgtattttacttgtgtgtctcagcc 19228758  T

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Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 280
Target Start/End: Original strand, 39743164 - 39743246
Alignment:
Q  198 gaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||||||||||||| |||||||||||||||  | |  |||||||||||||||||||| ||||  | ||||| | |||||||||    
T  39743164 gaggttttcctcggcagttaactgcagtcgaatttcaaattcctcggcagttaactgtcgagggggcaaaatcatattttact 39743246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 13838423 - 13838472
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggtt 230  Q
    ||||||||||||||   ||||||||||||||||||||||||||| |||||    
T  13838423 ttcggcagttaactgccgaggttttcctcggtagttaactgcagccggtt 13838472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 27532617 - 27532694
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    |||||||||||||   ||||||||||||| ||||||||||||||| ||| |    |||||||||||||||||| ||||    
T  27532617 tcggcagttaactgccgaggttttcctcgatagttaactgcagtcagttttatttttcctcggcagttaactgtcgag 27532694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 286
Target Start/End: Original strand, 4204211 - 4204313
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  |||||||||||||  |||||||||||| ||||| |  |||| |||| |||||||||| ||||| | ||||||||||  |||||     
T  4204211 tcggcagttaactaccgaggttttcctcgacagttaactgcag-cggtt-tcaaatttctcgacagttaactgtcgagagggcaaaaacgtaaattactc 4204308  T
Q  282 atgtg 286  Q
    |||||    
T  4204309 atgtg 4204313  T

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Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 7757398 - 7757356
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    ||||||||||||||  |||||||||||||| ||||||||||||    
T  7757398 tcggcagttaactagcgaggttttcctcggcagttaactgcag 7757356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 19037470 - 19037512
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    ||||||||||||||  |||||||||||||| ||||||||||||    
T  19037470 tcggcagttaactaccgaggttttcctcggcagttaactgcag 19037512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 280
Target Start/End: Complemental strand, 28387342 - 28387244
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||||||  |||| ||||||||| | |||||||||| |||   |  |||||||||||||||||||| ||||  |  |||| |||||||||||    
T  28387342 tcggcagttaactaccgaggatttcctcggcaattaactgcagccggaattcaaattcctcggcagttaactgtcgagggggtaaaatcgtattttact 28387244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 294
Target Start/End: Original strand, 35567081 - 35567139
Alignment:
Q  236 attcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagcc 294  Q
    |||||||| ||||||||||||||||   ||||||| |||||||||| |||| |||||||    
T  35567081 attcctcgacagttaactgccgagagagcaaaaacatattttacttgtgtgcctcagcc 35567139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 230
Target Start/End: Complemental strand, 35926433 - 35926387
Alignment:
Q  184 ggcagttaactattgaggttttcctcggtagttaactgcagtcggtt 230  Q
    ||||||||||||  |||||||||||||||||||||||| || |||||    
T  35926433 ggcagttaactaccgaggttttcctcggtagttaactgtagccggtt 35926387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 280
Target Start/End: Complemental strand, 41798891 - 41798793
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||| ||||||  ||||||||| |||| |||||||||||| ||| | |  ||||| || ||||||||||||||||  | ||||| | |||||||||    
T  41798891 tcggcagataactaccgaggttttcttcggcagttaactgcagccggatttcaaattcttcagcagttaactgccgagggggcaaaatcatattttact 41798793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 253
Target Start/End: Complemental strand, 13665491 - 13665418
Alignment:
Q  180 cttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaact 253  Q
    |||||| |||||||| | |||||||||||| | |||||||||||| ||||| |    |||||||||||||||||    
T  13665491 cttcggtagttaactgtcgaggttttcctcaggagttaactgcagccggttttatttttcctcggcagttaact 13665418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 25497584 - 25497523
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcg 243  Q
    ||||||||||||||  ||| |||||||||| |||||||||||| |  || ||||||||||||    
T  25497584 tcggcagttaactaccgagattttcctcggcagttaactgcagccaatttttgaattcctcg 25497523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 542790 - 542866
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccga 258  Q
    ||||||||||||||  |||  ||||||||| ||||| |||||| ||| | |  ||||||||| ||||||||||||||    
T  542790 tcggcagttaactaccgagagtttcctcggcagttagctgcagccggatttctaattcctcgacagttaactgccga 542866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 13568095 - 13568151
Alignment:
Q  202 ttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccga 258  Q
    |||||||||| |||||||||||| ||| | |  ||||||||||||||||||| ||||    
T  13568095 ttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactaccga 13568151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 13837797 - 13837757
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  13837797 tcggcagttaactaccgaggttttcctcggcagttaactgc 13837757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 25897079 - 25897155
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccga 258  Q
    ||||||||||||||  |||| |||||| || |||||||||||| |||   |  |||||||||| |||||||||||||    
T  25897079 tcggcagttaactaccgaggatttcctgggcagttaactgcagccggagttcaaattcctcggtagttaactgccga 25897155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 27660013 - 27659965
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggtt 230  Q
    ||||||||||||||  |||||||||||||| ||||||| || |||||||    
T  27660013 tcggcagttaactaccgaggttttcctcggcagttaaccgccgtcggtt 27659965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 28238212 - 28238172
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  28238212 tcggcagttaactaccgaggttttcctcggcagttaactgc 28238172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 30708873 - 30708913
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||| ||||||||| |||| ||||||||||    
T  30708873 tcggcagttaactatcgaggttttcttcggcagttaactgc 30708913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 41579723 - 41579842
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||||||||||||||  |||||||||||||| |||||||||||| ||||||||||||||||| ||| ||||||||||||  |  |||| |||||||||||    
T  41579723 ttcggcagttaactaccgaggttttcctcggcagttaactgcagccggttattgaattcctcagcaattaactgccgagggggaaaaatcgtattttact 41579822  T
Q  281 tatgtgtctcagccctatgc 300  Q
    |||||| ||||||| |||||    
T  41579823 tatgtgcctcagccttatgc 41579842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 182 - 300
Target Start/End: Original strand, 52570566 - 52570683
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  |||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||  || |||||||||||||| |     
T  52570566 tcggcagttaactaccgaggtttttctcggtagttaactgcagtcggtttttgaattcttcggcagttaactgccgagggga-aaaaacgtattttaatc 52570664  T
Q  282 atgtgtctcagccctatgc 300  Q
     |||| ||||||| |||||    
T  52570665 gtgtgcctcagccttatgc 52570683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 182 - 280
Target Start/End: Complemental strand, 41803071 - 41802973
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||||||  |||||||||||||| |||||||||||| ||||| || ||||| |||||||||||||||||||  | |||||||||||||||||    
T  41803071 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggtttttaaattcttcggcagttaactgccgagtgggcaaaaacgtattttact 41802973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 181 - 278
Target Start/End: Original strand, 7247859 - 7247956
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtatttta 278  Q
    |||| ||||||||||  |||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||  | ||||| |||||||||    
T  7247859 ttcgacagttaactaccgaggttttcctcgtcagttaactgcagccggttattgaattcctcggcagttaactgccgagggggcaaaagcgtatttta 7247956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 29918341 - 29918458
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  |||||||||||||| |||||||||||| ||||| | |||||  ||||||||||| |||||||  | ||||| ||||||||||||    
T  29918341 tcggcagttaactaacgaggttttcctcggcagttaactgcagccggttttcgaattattcggcagttaattgccgaggggccaaaatcgtattttactt 29918440  T
Q  282 atgtgtctcagccctatg 299  Q
    ||||| ||||||| ||||    
T  29918441 atgtgcctcagccttatg 29918458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 29967494 - 29967611
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  |||||||||||||| |||||||||||| ||||| | |||||  ||||||||||| |||||||  | ||||| ||||||||||||    
T  29967494 tcggcagttaactaacgaggttttcctcggcagttaactgcagccggttttcgaattattcggcagttaattgccgaggggccaaaatcgtattttactt 29967593  T
Q  282 atgtgtctcagccctatg 299  Q
    ||||| ||||||| ||||    
T  29967594 atgtgcctcagccttatg 29967611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 28611100 - 28611217
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  |  ||||||||||| |||||||||||| ||||| ||||||| ||||||||||||||||||||  | |||||   ||||||||||    
T  28611100 tcggcagttaactaccgttgttttcctcggcagttaactgcagccggtttttgaatttctcggcagttaactgccgagggggcaaaattatattttactt 28611199  T
Q  282 atgtgtctcagccctatg 299  Q
     |||||||||||| ||||    
T  28611200 gtgtgtctcagccttatg 28611217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 2432942 - 2433061
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||||||||||||||   ||||||||||||  ||||||||| |  |||||||||||||||||| |||||||||||||||  || |||| |||||||||||    
T  2432942 ttcggcagttaactaccaaggttttcctcgacagttaactgtatccggttattgaattcctcgacagttaactgccgaggggataaaagcgtattttact 2433041  T
Q  281 tatgtgtctcagccctatgc 300  Q
      |||| ||||||| |||||    
T  2433042 cgtgtgcctcagccttatgc 2433061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 259
Target Start/End: Complemental strand, 19440330 - 19440252
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    |||||||||||||||  |||||||||||||| |||||||||||| |||||  ||||||| |||||||||||||||||||    
T  19440330 ttcggcagttaactaccgaggttttcctcggcagttaactgcagccggtttatgaattcttcggcagttaactgccgag 19440252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 180 - 300
Target Start/End: Original strand, 13896874 - 13896994
Alignment:
Q  180 cttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttac 279  Q
    ||||||||||||||||  |||||||||||||  |||||||||||| | |||||| ||||| || ||| ||||||||||||  | ||||||| ||||||||    
T  13896874 cttcggcagttaactaccgaggttttcctcgacagttaactgcagccagttattaaattcttcagcaattaactgccgaggagtcaaaaacatattttac 13896973  T
Q  280 ttatgtgtctcagccctatgc 300  Q
    |  ||||||| |||| |||||    
T  13896974 tcgtgtgtcttagccttatgc 13896994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 294
Target Start/End: Complemental strand, 29929499 - 29929387
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||| |||||||||||||| |||||| ||||| ||||| |||||||||||  |||||||||| ||||    ||||| | ||||||||||    
T  29929499 tcggcagttaactatcgaggttttcctcggcagttaattgcagccggtttttgaattcctcaacagttaactgtcgagggagcaaaatcatattttactt 29929400  T
Q  282 atgtgtctcagcc 294  Q
     |||| |||||||    
T  29929399 gtgtgcctcagcc 29929387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 294
Target Start/End: Complemental strand, 29978653 - 29978541
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||| |||||||||||||| |||||| ||||| ||||| |||||||||||  |||||||||| ||||    ||||| | ||||||||||    
T  29978653 tcggcagttaactatcgaggttttcctcggcagttaattgcagccggtttttgaattcctcaacagttaactgtcgagggagcaaaatcatattttactt 29978554  T
Q  282 atgtgtctcagcc 294  Q
     |||| |||||||    
T  29978553 gtgtgcctcagcc 29978541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 185 - 253
Target Start/End: Original strand, 30256006 - 30256074
Alignment:
Q  185 gcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaact 253  Q
    |||||||||||| |||||||||||||| |||||||||||| ||||| || |||||||||||||||||||    
T  30256006 gcagttaactatcgaggttttcctcggcagttaactgcagccggttttttaattcctcggcagttaact 30256074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 66948 - 66862
Alignment:
Q  207 ctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagcc 294  Q
    |||||||||||||||||| ||||| |||||| |||||||||||||||||||||  | ||||| |||||||||||  ||||||||||||    
T  66948 ctcggtagttaactgcagccggtt-ttgaatacctcggcagttaactgccgagggggcaaaagcgtattttactcgtgtgtctcagcc 66862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 273
Target Start/End: Original strand, 19341594 - 19341685
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgta 273  Q
    |||||||||||||   || |||||||||||||||||||||||| ||| | |  |||||||||||||||||||||||||  ||||||||||||    
T  19341594 tcggcagttaactgccgaagttttcctcggtagttaactgcagccggatttctaattcctcggcagttaactgccgaggggacaaaaacgta 19341685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 285
Target Start/End: Complemental strand, 42756232 - 42756129
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||| | |||||||||||||| |||||||||||  ||| | || ||||||||| ||||||||||| |||  | |||||||||||||||||     
T  42756232 tcggcagttaactctcgaggttttcctcggcagttaactgcaaccggatttttaattcctcgacagttaactgctgagggggcaaaaacgtattttactc 42756133  T
Q  282 atgt 285  Q
    ||||    
T  42756132 atgt 42756129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 46345003 - 46344901
Alignment:
Q  189 ttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtc 288  Q
    |||||||  |||||||||||||| |||||||||||| || || |||||||||||| |||||||||||||||  | ||||||  |||||||||| |||| |    
T  46345003 ttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcctcgacagttaactgccgagggggcaaaaaaatattttacttgtgtgcc 46344904  T
Q  289 tca 291  Q
    |||    
T  46344903 tca 46344901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 45101872 - 45101957
Alignment:
Q  206 cctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctca 291  Q
    |||||| |||||||||||| ||||| |||||||||||  || ||||||||||||  || |||||||||||||||||||||| ||||    
T  45101872 cctcggcagttaactgcagccggtttttgaattcctcaacaattaactgccgaggggataaaaacgtattttacttatgtgcctca 45101957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 300
Target Start/End: Original strand, 19454348 - 19454443
Alignment:
Q  205 tcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagccctatgc 300  Q
    ||||||| |||||||||||  || || ||||||||||| ||||||||||||||||| | ||||| |||||||||||  ||||||||| || |||||    
T  19454348 tcctcggcagttaactgcaaccgatttttgaattcctcagcagttaactgccgagagggcaaaagcgtattttactcgtgtgtctcaaccttatgc 19454443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 182 - 293
Target Start/End: Complemental strand, 34691698 - 34691587
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  |||||||||||||  |||||||||||| ||| | || | |||||||||||||||||||||||  | |||||  ||||||||||     
T  34691698 tcggcagttaactaccgaggttttcctcgacagttaactgcagccggatttttatttcctcggcagttaactgccgaggaggcaaaattgtattttacta 34691599  T
Q  282 atgtgtctcagc 293  Q
     ||| |||||||    
T  34691598 gtgtttctcagc 34691587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 52567836 - 52567718
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||   | ||||| ||||| |||||| ||||| || || |||||||  |||||||||||||||||||| | ||||| |||||||||||     
T  52567836 tcggcagttaactacctaagtttttctcggcagttaagtgcagccgatttttgaattattcggcagttaactgccgagaaggcaaaatcgtattttactc 52567737  T
Q  282 atgtgtctcagccctatgc 300  Q
     |||| ||||||| |||||    
T  52567736 gtgtgcctcagccttatgc 52567718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 2743471 - 2743394
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    |||||||||||||   |||||||||||||| |||||||||||| ||| | |  |||||||||||||||||||||||||    
T  2743471 tcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgag 2743394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 205 - 294
Target Start/End: Original strand, 7839522 - 7839611
Alignment:
Q  205 tcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagcc 294  Q
    |||||||||||||||||||| ||||| |||||||||||| ||||| |||||||||  | ||||||||||  |||||  ||| ||||||||    
T  7839522 tcctcggtagttaactgcagccggtttttgaattcctcgacagtttactgccgagggggcaaaaacgtaaattactcgtgtatctcagcc 7839611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 254
Target Start/End: Complemental strand, 9582621 - 9582548
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactg 254  Q
    ||||||||||||||   || ||||| ||||| |||||||||||||||||| ||||||| |||||||||||||||    
T  9582621 ttcggcagttaactgacgaagtttttctcggcagttaactgcagtcggtttttgaatttctcggcagttaactg 9582548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 1293625 - 1293560
Alignment:
Q  7 gtttggaggtggattttgttgctcttcttctgttacttcttgcaaagtgtagcacagtgtttgatttg 74  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||| |||||   |||||||||||||    
T  1293625 gtttggatgtggattttgttgctcttcttctgttacctcttgcaaaatgtag--gagtgtttgatttg 1293560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 294
Target Start/End: Original strand, 49196453 - 49196561
Alignment:
Q  186 cagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgt 285  Q
    ||||||||||| | ||||||||||||||||||||||||  ||| | || ||||||||| |||||| ||  ||||  | |||||||||||||||||  |||    
T  49196453 cagttaactatcgcggttttcctcggtagttaactgcaaccggatttttaattcctcgacagttagctatcgagggggcaaaaacgtattttactcgtgt 49196552  T
Q  286 gtctcagcc 294  Q
     ||||||||    
T  49196553 ttctcagcc 49196561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 3112796 - 3112873
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccga 258  Q
    ||||||||||||||  |||||||||||||| || |||| ||||| ||||| | || ||||||||||||||||| ||||    
T  3112796 ttcggcagttaactgctgaggttttcctcgataattaattgcagccggttttggacttcctcggcagttaactaccga 3112873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 9429849 - 9429926
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    ||||||||||||||  |||||||||||||||| |||||||||| |   | |  |||||||||||||||||||||||||    
T  9429849 tcggcagttaactaccgaggttttcctcggtacttaactgcagccaaatttcaaattcctcggcagttaactgccgag 9429926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 55207663 - 55207780
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||   ||||| |||| || |||||||||||  ||||| |||||||| ||||||||||||||||||   | |||||  ||||||||||     
T  55207663 tcggcagttaactaccaaggttgtcctaggcagttaactgcaaccggtttttgaattcttcggcagttaactgccgatggggcaaaagagtattttactc 55207762  T
Q  282 atgtgtctcagccctatg 299  Q
     ||| |||||||| ||||    
T  55207763 gtgtttctcagccatatg 55207780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 281
Target Start/End: Original strand, 43571684 - 43571784
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||||||||| |||||  || ||||| | || |||||||||||| ||  | ||||||||||| ||||||||||||||||  | ||||||| |||||||||    
T  43571684 ttcggcagtttactatcaagattttcattggcagttaactgcagccgacttttgaattcctcagcagttaactgccgagggggcaaaaacatattttact 43571783  T
Q  281 t 281  Q
    |    
T  43571784 t 43571784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 286
Target Start/End: Original strand, 48250869 - 48250973
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    |||||||||||||   |||||||||||||| |||||||||||| |||   |  |||||||| ||||||||||||||||  | |||||||||  |||| ||    
T  48250869 tcggcagttaactcccgaggttttcctcggcagttaactgcagccggaattcaaattcctcagcagttaactgccgagggggcaaaaacgtcatttattt 48250968  T
Q  282 atgtg 286  Q
    |||||    
T  48250969 atgtg 48250973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 292
Target Start/End: Complemental strand, 48888811 - 48888704
Alignment:
Q  184 ggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttat 283  Q
    ||||||||||||  ||| |||||||||| |||||||||||| ||| | || ||||||||||||| |||||||||||  | ||   ||||||||||||| |    
T  48888811 ggcagttaactaccgagattttcctcggcagttaactgcagccggatttttaattcctcggcag-taactgccgagggggcatttacgtattttacttgt 48888713  T
Q  284 gtgtctcag 292  Q
    ||| |||||    
T  48888712 gtgcctcag 48888704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 294
Target Start/End: Complemental strand, 11380513 - 11380402
Alignment:
Q  183 cggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactta 282  Q
    ||||||| |||||  |||||| ||||||| |||||||||||  |   | || ||||||||||||||||||||||||   | |||||||||||||||||      
T  11380513 cggcagtaaactaccgaggttatcctcggcagttaactgcaaccatatttttaattcctcggcagttaactgccgaaggggcaaaaacgtattttactcg 11380414  T
Q  283 tgtgtctcagcc 294  Q
    ||| ||||||||    
T  11380413 tgtttctcagcc 11380402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 272
Target Start/End: Complemental strand, 46989617 - 46989530
Alignment:
Q  185 gcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgt 272  Q
    |||||||||||  |||||||||||||| |||||||||||| |||   |  |||| ||||| ||||||||||||||| | |||||||||    
T  46989617 gcagttaactaccgaggttttcctcggcagttaactgcagccggaattcaaatttctcggtagttaactgccgagagggcaaaaacgt 46989530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 13743347 - 13743289
Alignment:
Q  201 gttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    ||||||||||| |||||||||||| ||| | |  |||||||||||||||||||||||||    
T  13743347 gttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgag 13743289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 36812910 - 36812832
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcgg-ttattgaattcctcggcagttaactgccgag 259  Q
    ||||||||| ||||  ||||||||||||||||||||||||||| ||| || |  |||||||||| || |||||||||||    
T  36812910 tcggcagtttactaccgaggttttcctcggtagttaactgcagccggattttcaaattcctcggtagctaactgccgag 36812832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 300
Target Start/End: Original strand, 41805691 - 41805793
Alignment:
Q  198 gaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagcccta 297  Q
    |||||||||||||| |||||| ||||| ||||  || ||||| ||| |||||||||||||||    ||||||||||  |||||| |||| ||||||| ||    
T  41805691 gaggttttcctcggcagttaattgcagccggtctttaaattcttcgacagttaactgccgaggaagcaaaaacgtaaattacttgtgtgcctcagcctta 41805790  T
Q  298 tgc 300  Q
    |||    
T  41805791 tgc 41805793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 46347719 - 46347777
Alignment:
Q  180 cttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaatt 238  Q
    ||||| ||||||| ||| |||||||||||||| |||||||||||| || ||||||||||    
T  46347719 cttcgacagttaattatcgaggttttcctcggcagttaactgcagccgattattgaatt 46347777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 49140847 - 49140889
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    |||||||||||||| ||||||||||||||| ||||||||||||    
T  49140847 tcggcagttaactactgaggttttcctcggcagttaactgcag 49140889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 1294076 - 1294125
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggtt 230  Q
    ||||||||||||||   |||||||||||||| ||||||||||||||||||    
T  1294076 ttcggcagttaactgccgaggttttcctcggaagttaactgcagtcggtt 1294125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 4002505 - 4002582
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    |||||||||||||   |||||||||||||| |||||||||||| ||| | |  |||||||| | ||||||||||||||    
T  4002505 tcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcagtagttaactgccgag 4002582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 6489402 - 6489288
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  |||| ||||||||| |||||||||||| |||||  | |||||||||||    ||||||||||  | ||||||||||  ||||||    
T  6489402 tcggcagttaactaccgaggatttcctcggcagttaactgcagccggtttcttaattcctcggc----aactgccgagggggcaaaaacgtaaattactt 6489307  T
Q  282 atgtgtctcagccctatgc 300  Q
     |||| |||| || |||||    
T  6489306 gtgtgcctcaaccttatgc 6489288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 13747719 - 13747795
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    ||||||||||||||  |||||||||||| | |||||||||||| ||| | |  ||||| |||||||||||||||||||    
T  13747719 tcggcagttaactac-gaggttttcctcagcagttaactgcagccggatttcaaattcatcggcagttaactgccgag 13747795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 251
Target Start/End: Original strand, 20918011 - 20918080
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaa 251  Q
    ||||||||||||||  |||||||||||||| ||||||||| || ||| | || ||||| |||||||||||    
T  20918011 tcggcagttaactaccgaggttttcctcggcagttaactgtagccggatttttaattcatcggcagttaa 20918080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 251
Target Start/End: Original strand, 20926973 - 20927042
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaa 251  Q
    ||||||||||||||  |||||||||||||| ||||||||| || ||| | || ||||| |||||||||||    
T  20926973 tcggcagttaactaccgaggttttcctcggcagttaactgtagccggatttttaattcatcggcagttaa 20927042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 280
Target Start/End: Original strand, 49219808 - 49219889
Alignment:
Q  199 aggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||||| |||||||||||| ||| | |  ||||||||||||||||||| |||||  | |||||  ||||||||||    
T  49219808 aggttttcctcggcagttaactgcagccggatttctaattcctcggcagttaactaccgaggaggcaaaattgtattttact 49219889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 51402398 - 51402515
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  |||||||||||||  |||||||| || ||| || |||||||  || ||| |||||||| |||    |||||||||||||||||     
T  51402398 tcggcagttaactaccgaggttttcctcgacagttaactacaatcgatttttgaattattctgcaattaactgctgaggaagcaaaaacgtattttactc 51402497  T
Q  282 atgtgtctcagccctatg 299  Q
     ||| |||||||| ||||    
T  51402498 gtgtttctcagccatatg 51402515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 300
Target Start/End: Complemental strand, 55267481 - 55267396
Alignment:
Q  215 ttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagccctatgc 300  Q
    |||||||||| || || |||||||| |||||||||||||| ||||  | ||||||||||  |||||  |||||||||||| |||||    
T  55267481 ttaactgcagccgatttttgaattcttcggcagttaactgtcgagggggcaaaaacgtaaattactcgtgtgtctcagccttatgc 55267396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 260
Target Start/End: Complemental strand, 3948807 - 3948723
Alignment:
Q  177 ttccttcggcagttaactattgaggttttcctcggtagttaactgcagtcgg-ttattgaattcctcggcagttaactgccgaga 260  Q
    |||| |||||||||||||| |||||  ||||||||||||||||||| | ||| ||  | ||  ||||||||||||||||||||||    
T  3948807 ttccctcggcagttaactactgaggaattcctcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccgaga 3948723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 19341117 - 19341069
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggtt 230  Q
    ||||||||||||| | || |||||||||||||||||||||||| |||||    
T  19341117 tcggcagttaactgtcgaagttttcctcggtagttaactgcagccggtt 19341069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 20366234 - 20366178
Alignment:
Q  213 agttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaa 269  Q
    ||||||||||||  |||| ||||||||||||||||||||||||| ||| | ||||||    
T  20366234 agttaactgcagctggtttttgaattcctcggcagttaactgccaagaaggcaaaaa 20366178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 24700794 - 24700718
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccga 258  Q
    ||||||||||||||  |||| ||||||||| |||||||||||  ||| | |  ||||||||| ||||||||||||||    
T  24700794 tcggcagttaactaccgaggatttcctcgggagttaactgcaaccggatttctaattcctcgacagttaactgccga 24700718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 32593112 - 32593160
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggtt 230  Q
    ||||||||||||||| || ||||||||||| |||||||||||| |||||    
T  32593112 tcggcagttaactatcgaagttttcctcggaagttaactgcagccggtt 32593160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 50604419 - 50604462
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    ||||||||||||||   |||||||||||||||||||||||||||    
T  50604419 ttcggcagttaactgccgaggttttcctcggtagttaactgcag 50604462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 2647699 - 2647741
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    ||||||||||||||  |||||||||||||| ||||||||||||    
T  2647699 tcggcagttaactaccgaggttttcctcggcagttaactgcag 2647741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 294
Target Start/End: Original strand, 6505973 - 6506063
Alignment:
Q  204 ttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagcc 294  Q
    |||||||| |||||||||||| |||||  | ||||||| ||||||||||| | |||  ||||||||||||  |||||  |||| |||||||    
T  6505973 ttcctcggcagttaactgcagccggtttcttaattccttggcagttaacttctgaggggacaaaaacgtaaattactcgtgtgcctcagcc 6506063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 34049153 - 34049111
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    ||||||||||||||  |||||||||||||| ||||||||||||    
T  34049153 tcggcagttaactaccgaggttttcctcggcagttaactgcag 34049111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 34645636 - 34645559
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaa-ttcctcggcagttaactgccga 258  Q
    ||||||||||||||   |||||||||||||  |||||||||||||||||| |||||    |||||||||||||||||||    
T  34645636 ttcggcagttaactgccgaggttttcctcgagagttaactgcagtcggtt-ttgaagaaactcggcagttaactgccga 34645559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 41137772 - 41137718
Alignment:
Q  201 gttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    ||||||||||| |||||||||||| ||| | |  |||||||||||||||||||||    
T  41137772 gttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgc 41137718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 43476265 - 43476223
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    ||||||||||||||  |||||||||||||| ||||||||||||    
T  43476265 tcggcagttaactaccgaggttttcctcggcagttaactgcag 43476223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 49268843 - 49268957
Alignment:
Q  180 cttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttac 279  Q
    ||||||||||||||||  || ||||||||||| |||||||||||  ||| | || ||||||||  |||||||| || ||   ||||||| | ||||||||    
T  49268843 cttcggcagttaactaccgatgttttcctcggcagttaactgcaaccggatttttaattcctccacagttaacggctgaagggacaaaatcatattttac 49268942  T
Q  280 ttatgtgtctcagcc 294  Q
    |  ||| ||||||||    
T  49268943 tggtgtttctcagcc 49268957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 54389868 - 54389826
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    ||||||||||||||  |||||||||||||| ||||||||||||    
T  54389868 tcggcagttaactaccgaggttttcctcggcagttaactgcag 54389826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 260
Target Start/End: Original strand, 30839158 - 30839238
Alignment:
Q  180 cttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaa-ttcctcggcagttaactgccgaga 260  Q
    |||||||||||||||   ||||||||||| || |||||||||||| ||||| ||||| |  |||| ||||||||||||||||    
T  30839158 cttcggcagttaactgccgaggttttccttgggagttaactgcagccggtt-ttgaactgtctcgacagttaactgccgaga 30839238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 34694434 - 34694511
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    |||||||||||||   |||||||| ||||| |||| ||||||| ||| | |  ||||||||| |||||||||||||||    
T  34694434 tcggcagttaactcccgaggtttttctcggcagtttactgcagccggatttctaattcctcgacagttaactgccgag 34694511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 36817521 - 36817594
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    ||||||||||||||  |||| |||||||| ||||||||||||| |||   |  |||||||||| ||||||||||    
T  36817521 tcggcagttaactaccgaggatttcctcgatagttaactgcagccggagttcaaattcctcggtagttaactgc 36817594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 50216879 - 50216928
Alignment:
Q  207 ctcggtagttaactgcagtcggttattgaattcctcggcagttaactgcc 256  Q
    ||||| |||||||||||| ||| | || ||||||||||||||||||||||    
T  50216879 ctcggcagttaactgcagccggatttttaattcctcggcagttaactgcc 50216928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 2830989 - 2831037
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggtt 230  Q
    ||||||||||||| | |||||||| ||| ||||||||||| ||||||||    
T  2830989 tcggcagttaactgtcgaggtttttctcagtagttaactgtagtcggtt 2831037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 30943262 - 30943222
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  30943262 tcggcagttaactaccgaggttttcctcggcagttaactgc 30943222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 35743582 - 35743622
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  35743582 tcggcagttaactaccgaggttttcctcggcagttaactgc 35743622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 41844364 - 41844404
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  41844364 tcggcagttaactaccgaggttttcctcggcagttaactgc 41844404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 45098871 - 45098828
Alignment:
Q  215 ttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    |||||||||| || || ||||||||||||||||||||||||||||    
T  45098871 ttaactgcagccgttt-ttgaattcctcggcagttaactgccgag 45098828  T

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Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 46697784 - 46697744
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  46697784 tcggcagttaactaccgaggttttcctcggcagttaactgc 46697744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 50477253 - 50477213
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  50477253 tcggcagttaactaccgaggttttcctcggcagttaactgc 50477213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 18441441 - 18441558
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    |||||||||||||   |||||||| ||||| |||||||| || |||||||||||||| ||||||||||||||||||||  | ||||||||||||||||||    
T  18441441 tcggcagttaactgccgaggtttttctcggcagttaactacaatcggttattgaatttctcggcagttaactgccgagggggcaaaaacgtattttactt 18441540  T
Q  282 atgtgtctcagccctatg 299  Q
     |||||||||||| ||||    
T  18441541 gtgtgtctcagccttatg 18441558  T

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Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 41855441 - 41855324
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    |||| |||||||||  |||||||||||||| |||||||||||| || || |||||||| ||| |||||||||||||||  | |||||||||||||||||     
T  41855441 tcggtagttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcttcgacagttaactgccgaggaggcaaaaacgtattttactc 41855342  T
Q  282 atgtgtctcagccctatg 299  Q
    |||| |||||||| ||||    
T  41855341 atgtttctcagccatatg 41855324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 42602533 - 42602416
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  |||||||||||||| |||||||||||  ||||| |||||||| |||||||||||||||||| |  ||||||| ||||||||||     
T  42602533 tcggcagttaactaccgaggttttcctcggcagttaactgcatccggtttttgaattcttcggcagttaactgccgatagaacaaaaatgtattttactc 42602434  T
Q  282 atgtgtctcagccctatg 299  Q
     ||| |||||||| ||||    
T  42602433 gtgtttctcagccatatg 42602416  T

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Target: chr8; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 294
Target Start/End: Complemental strand, 18205859 - 18205747
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  ||||||||||| || |||||||||||| ||||| |||||||| |||||||||||| |||||| ||  ||||||||||||||||     
T  18205859 tcggcagttaactaccgaggttttccttggcagttaactgcagccggtttttgaattcttcggcagttaaccgccgaggtggtaaaaacgtattttactc 18205760  T
Q  282 atgtgtctcagcc 294  Q
     ||| ||||||||    
T  18205759 gtgtttctcagcc 18205747  T

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Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 18438708 - 18438589
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||||||   |||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||   | ||||| |||||||||||    
T  18438708 ttcggcagttaactcccgaggttttcctcggcagttaactgcagccggttattgaattcctcaacagttaactgccgaaggggcaaaagcgtattttact 18438609  T
Q  281 tatgtgtctcagccctatgc 300  Q
    | ||||  |||||| |||||    
T  18438608 tgtgtgcatcagccttatgc 18438589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 21406340 - 21406267
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    ||||||||||||||  || |||||||||||||||||||||||| |||||  |||||||||||||||||||||||    
T  21406340 tcggcagttaactaccgaagttttcctcggtagttaactgcagccggtttatgaattcctcggcagttaactgc 21406267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 21800832 - 21800759
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    ||||||||||||||  || |||||||||||||||||||||||| |||||  |||||||||||||||||||||||    
T  21800832 tcggcagttaactaccgaagttttcctcggtagttaactgcagccggtttatgaattcctcggcagttaactgc 21800759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 40039683 - 40039755
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaact 253  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| || | || ||||||| |||||||||    
T  40039683 ttcggcagttaactatcgaggttttcctcggtagttaactgcagtcgattttggacttcctcgacagttaact 40039755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 299
Target Start/End: Original strand, 41858143 - 41858238
Alignment:
Q  204 ttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagccctatg 299  Q
    |||||||| |||||||||||| ||||| |||||||| ||| |||||||||||||||  | |||||||||||||||||  ||| |||||||| ||||    
T  41858143 ttcctcggcagttaactgcagccggtttttgaattcttcgccagttaactgccgagggggcaaaaacgtattttactcgtgtttctcagccatatg 41858238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 16422485 - 16422419
Alignment:
Q  8 tttggaggtggattttgttgctcttcttctgttacttcttgcaaagtgtagcacagtgtttgatttg 74  Q
    |||||||||| ||||||||| |||||||||||||| |||||||||||||| || |||||||||||||    
T  16422485 tttggaggtgaattttgttgttcttcttctgttacctcttgcaaagtgtaacaaagtgtttgatttg 16422419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 38134438 - 38134362
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagt---taactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    ||||||||||||||| || |||||||||||||||   |||||||||||||||  |||||||||||||||||||||||    
T  38134438 tcggcagttaactatcgaagttttcctcggtagtagttaactgcagtcggtttatgaattcctcggcagttaactgc 38134362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 299
Target Start/End: Complemental strand, 7168145 - 7168044
Alignment:
Q  198 gaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagcccta 297  Q
    |||||||||||||| |||||||||||| ||||| |||||||| ||||||| |||| | ||||  | ||||| |||||||||||| |||| ||||||| ||    
T  7168145 gaggttttcctcggcagttaactgcagccggtttttgaattcttcggcagctaacagtcgagggggcaaaatcgtattttacttgtgtgcctcagcctta 7168046  T
Q  298 tg 299  Q
    ||    
T  7168045 tg 7168044  T

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Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 279
Target Start/End: Original strand, 34823016 - 34823113
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttac 279  Q
    ||||||||||||||  |||||||||||||  | |||||||||| ||  | || ||||||||| |||||||||||||||| ||||||||||||| ||||    
T  34823016 tcggcagttaactaccgaggttttcctcgacaattaactgcagccgtatttttaattcctcgacagttaactgccgagaggacaaaaacgtatattac 34823113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 35962380 - 35962276
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    |||||||||||||   |||||||||||||| ||||||||| || ||| | |  ||||||||| |||||||||||||||| | ||||| |||||||||||     
T  35962380 tcggcagttaactcccgaggttttcctcggcagttaactgtagccggatttcaaattcctcgacagttaactgccgagagggcaaaatcgtattttacta 35962281  T
Q  282 atgtg 286  Q
    |||||    
T  35962280 atgtg 35962276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 300
Target Start/End: Original strand, 38872932 - 38873048
Alignment:
Q  184 ggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttat 283  Q
    ||||||||| ||  |||||||||||||| |||||||||||| ||||| || |||||||||| ||||||||| ||||  ||||||||  | |||||||| |    
T  38872932 ggcagttaattaccgaggttttcctcggcagttaactgcagccggtttttaaattcctcggtagttaactgacgaggggacaaaaatattttttacttgt 38873031  T
Q  284 gtgtctcagccctatgc 300  Q
    |||  |||||| |||||    
T  38873032 gtgcatcagccttatgc 38873048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 175 - 280
Target Start/End: Complemental strand, 1114823 - 1114718
Alignment:
Q  175 cattccttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtat 274  Q
    |||||| ||||||||||||||  |||| ||||||||| |||||||||||| ||| | |  |||| ||||||||||||||||||||  |  |||| |||||    
T  1114823 cattccctcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaatttctcggcagttaactgccgagggggtaaaatcgtat 1114724  T
Q  275 tttact 280  Q
    ||||||    
T  1114723 tttact 1114718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 287
Target Start/End: Complemental strand, 22577738 - 22577633
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  |||||||||||||  |||||||||||  |  || ||||||||||| ||| ||||||||||||   |||||||||||||||| ||    
T  22577738 tcggcagttaactaccgaggttttcctcgacagttaactgcaaccaatttttgaattcctcagcaattaactgccgagggaacaaaaacgtattttattt 22577639  T
Q  282 atgtgt 287  Q
     |||||    
T  22577638 gtgtgt 22577633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 259
Target Start/End: Original strand, 42605233 - 42605311
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    |||||||||||||||  || |||||| |||| |||||||||||| || || |||||||| ||| |||||||||||||||    
T  42605233 ttcggcagttaactaccgatgttttcatcggcagttaactgcagccgatttttgaattcttcgacagttaactgccgag 42605311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 21835179 - 21835252
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    ||||||||||| ||  || |||||||||||||||||||||||| |||||  ||||||||||| || ||||||||    
T  21835179 tcggcagttaaataccgaagttttcctcggtagttaactgcagccggtttatgaattcctcgacatttaactgc 21835252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 300
Target Start/End: Complemental strand, 35389564 - 35389463
Alignment:
Q  199 aggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagccctat 298  Q
    ||||||||||||| ||||||||||||  |||| ||||||| ||||||||||||||| |||   | ||||||||||  |||||  | |||||||||| |||    
T  35389564 aggttttcctcggcagttaactgcagctggtttttgaatttctcggcagttaactgtcgaagaggcaaaaacgtaaattactcgtatgtctcagccttat 35389465  T
Q  299 gc 300  Q
    ||    
T  35389464 gc 35389463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 38135629 - 38135682
Alignment:
Q  202 ttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    ||||||||||||||||||||||| |||||  | |||||||||||||||||||||    
T  38135629 ttttcctcggtagttaactgcagccggtttataaattcctcggcagttaactgc 38135682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 299
Target Start/End: Complemental strand, 4866482 - 4866391
Alignment:
Q  207 ctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagccctatg 299  Q
    |||||||||||||||||| ||||| ||||||| || | |||||||||||||||  |||||   |||||||||||  |||||||||||| ||||    
T  4866482 ctcggtagttaactgcagccggtttttgaatttcttgacagttaactgccgag-ggacaatttcgtattttactcgtgtgtctcagccttatg 4866391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 32383203 - 32383247
Alignment:
Q  180 cttcggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    ||||||||||||||||  |||||||||||||||||||||||||||    
T  32383203 cttcggcagttaactaccgaggttttcctcggtagttaactgcag 32383247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 32437158 - 32437202
Alignment:
Q  180 cttcggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    ||||||||||||||||  |||||||||||||||||||||||||||    
T  32437158 cttcggcagttaactaccgaggttttcctcggtagttaactgcag 32437202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 294
Target Start/End: Original strand, 40077250 - 40077362
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  |||||||||||||| |||||||||||||||| | || ||| ||| | ||||| || |  |||  | |||||||||||||||||     
T  40077250 tcggcagttaactaccgaggttttcctcggcagttaactgcagtcggatttttaataccttgacagtttaccgttgagggggcaaaaacgtattttactc 40077349  T
Q  282 atgtgtctcagcc 294  Q
     ||| ||||||||    
T  40077350 gtgtttctcagcc 40077362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 291
Target Start/End: Complemental strand, 3395942 - 3395856
Alignment:
Q  205 tcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctca 291  Q
    ||||||| ||||||||||| ||  || || ||||||||||||||||||||| |||  | ||||||| |||||||||| |||| ||||    
T  3395942 tcctcggcagttaactgcaatcaatttttaaattcctcggcagttaactgctgagggggcaaaaacatattttacttgtgtgcctca 3395856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 20549251 - 20549309
Alignment:
Q  201 gttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    |||||||||||||||||||||||| ||  | |  |||||||||||||||||||||||||    
T  20549251 gttttcctcggtagttaactgcagccgaatttcaaattcctcggcagttaactgccgag 20549309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 255
Target Start/End: Complemental strand, 38330590 - 38330516
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    ||||| ||||||||   |||||||||||| |||||||||||||| ||||| | || |||||||| ||||||||||    
T  38330590 ttcggtagttaactgccgaggttttcctcagtagttaactgcagccggttttagacttcctcggtagttaactgc 38330516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 280
Target Start/End: Complemental strand, 39751130 - 39751049
Alignment:
Q  198 gaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||||||||||||| |||||||||||| ||||| |  ||||| ||||||||||| |||| ||  | |||||||||||||||||    
T  39751130 gaggttttcctcggcagttaactgcagccggtt-tcaaattcatcggcagttaattgccaagggggcaaaaacgtattttact 39751049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 2146957 - 2147029
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    ||||||||||||||  |||||||||||||| |||| ||||||| ||||| |  |||||| ||||||||||||||    
T  2146957 tcggcagttaactaccgaggttttcctcggcagtttactgcagccggtt-tcaaattccccggcagttaactgc 2147029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 280
Target Start/End: Original strand, 26455698 - 26455779
Alignment:
Q  199 aggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||||||||| ||||||||| ||||| | | | || |||||||| ||||||||||||||||| |  |||| |||||||||||    
T  26455698 aggttttccttggtagttaattgcagccagatttttaattcctccgcagttaactgccgagagggtaaaaccgtattttact 26455779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 22550865 - 22550941
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccga 258  Q
    ||||||||||||||  |||||||||||||| |||||||||||| ||| | |  ||  | ||||||||||||||||||    
T  22550865 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccga 22550941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 280
Target Start/End: Complemental strand, 45454457 - 45454381
Alignment:
Q  204 ttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||||||| |||||||||||  ||| | |  |||||||||||||||||||||||||  | ||||| |||||||||||    
T  45454457 ttcctcggcagttaactgcatccggatttcaaattcctcggcagttaactgccgaggaggcaaaatcgtattttact 45454381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 7172606 - 7172693
Alignment:
Q  201 gttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtc 288  Q
    ||||| ||||| |||||| ||||| ||||| |  |||| |||||||||||||||  ||   | |||||||||||||||||||||||||    
T  7172606 gtttttctcggcagttaattgcagccggttttaaaatttctcggcagttaactgttgatggggcaaaaacgtattttacttatgtgtc 7172693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 260
Target Start/End: Complemental strand, 7340140 - 7340061
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcgg-ttattgaattcctcggcagttaactgccgaga 260  Q
    ||||||||||||||  ||||  ||||||||||||||||||| | ||| || || ||  ||||||||||||||||||||||    
T  7340140 tcggcagttaactaccgaggaattcctcggtagttaactgccgccggtttcttaaaaacctcggcagttaactgccgaga 7340061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 224
Target Start/End: Complemental strand, 40039200 - 40039157
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    ||||||||||||||   |||||||||||||||||||||||||||    
T  40039200 ttcggcagttaacttccgaggttttcctcggtagttaactgcag 40039157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 41016487 - 41016444
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagt 225  Q
    ||||||||||||||  |||||||||||||| |||||||||||||    
T  41016487 tcggcagttaactaccgaggttttcctcggcagttaactgcagt 41016444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 43369853 - 43369790
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggc 245  Q
    |||| |||||||| | |||| |||||||||||||||| ||||| || || ||||||||||||||    
T  43369853 tcggtagttaactgtcgaggatttcctcggtagttaattgcagccgatttttgaattcctcggc 43369790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 281
Target Start/End: Original strand, 28168620 - 28168698
Alignment:
Q  203 tttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    |||| |||||||||||||||||  | || ||| |||| ||| |||||||||||||||  | ||||||| ||||||||||    
T  28168620 tttcttcggtagttaactgcagctgatttttgcattcttcgacagttaactgccgaggaggcaaaaacatattttactt 28168698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 28646266 - 28646320
Alignment:
Q  201 gttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    ||||||||||| |||||||||||| || || || |||||||||||| ||||||||    
T  28646266 gttttcctcggcagttaactgcagccgatttttaaattcctcggcaattaactgc 28646320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 28650850 - 28650904
Alignment:
Q  201 gttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    ||||||||||| |||||||||||| || || || |||||||||||| ||||||||    
T  28650850 gttttcctcggcagttaactgcagccgatttttaaattcctcggcaattaactgc 28650904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 34366984 - 34366942
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    ||||||||||||||  |||||||||||||| ||||||||||||    
T  34366984 tcggcagttaactaccgaggttttcctcggaagttaactgcag 34366942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 280
Target Start/End: Original strand, 35966753 - 35966847
Alignment:
Q  186 cagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||  |||| |||| |||  | |||||||||||||| | |  |||||||||||||||||||||||||  | |||||  ||||||||||    
T  35966753 cagttaactaccgaggatttcttcgacaattaactgcagtcggatttcaaattcctcggcagttaactgccgagggggcaaaattgtattttact 35966847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 39277461 - 39277503
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    |||||||||||||  ||||||||||||||||| ||||||||||    
T  39277461 tcggcagttaactgctgaggttttcctcggtaattaactgcag 39277503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 258
Target Start/End: Original strand, 39753020 - 39753073
Alignment:
Q  204 ttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccga 258  Q
    |||||||||| |||||||||| ||||| |  ||||||||||||||||||||||||    
T  39753020 ttcctcggtatttaactgcagccggtt-tcaaattcctcggcagttaactgccga 39753073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 41250072 - 41250118
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcgg 228  Q
    |||||||||||| || |||||||||||||| ||| ||||||||||||    
T  41250072 tcggcagttaaccatcgaggttttcctcggcagtaaactgcagtcgg 41250118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 272
Target Start/End: Original strand, 44052231 - 44052316
Alignment:
Q  187 agttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgt 272  Q
    |||||||||  ||||||||||||||||| ||||||||| ||| |    |||||||||||| |||||| |||||  | |||||||||    
T  44052231 agttaactaccgaggttttcctcggtaggtaactgcagccggattgcaaattcctcggcaattaactaccgagggggcaaaaacgt 44052316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 184552 - 184592
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  184552 tcggcagttaactaccgaggttttcctcggcagttaactgc 184592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 8419477 - 8419437
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  8419477 tcggcagttaactaccgaggttttcctcggcagttaactgc 8419437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 26663033 - 26663073
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  26663033 tcggcagttaactaccgaggttttcctcggcagttaactgc 26663073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 32375724 - 32375684
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  32375724 tcggcagttaactaccgaggttttcctcggcagttaactgc 32375684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 34892809 - 34892857
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggtt 230  Q
    |||||||||||||   || ||||||||||| ||||||||||||||||||    
T  34892809 tcggcagttaactgccgaagttttcctcggcagttaactgcagtcggtt 34892857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 3e-29; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 29700302 - 29700419
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    |||||| |||||||  |||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||| ||||  ||||||| ||||||||||||    
T  29700302 tcggcaattaactaccgaggttttcctcggcagttaactgcagccggttattgaattcctcagcagttaactgtcgaggagacaaaagcgtattttactt 29700401  T
Q  282 atgtgtctcagccctatg 299  Q
     |||| ||||||| ||||    
T  29700402 gtgtgcctcagccttatg 29700419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 182 - 294
Target Start/End: Original strand, 958594 - 958705
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  |||||||||||||| |||||||||||  ||||| |||||||| ||| |||||||||| ||||| ||||||||||||||||||||    
T  958594 tcggcagttaactaccgaggttttcctcggcagttaactgcaaccggtttttgaattcatcg-cagttaactgtcgagaggacaaaaacgtattttactt 958692  T
Q  282 atgtgtctcagcc 294  Q
    ||||| |||||||    
T  958693 atgtgcctcagcc 958705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 21470976 - 21470867
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  |||||||||||| |  ||||||||||||| ||| |||||| ||||| |||||||||||||||| ||||||||||||||||||||    
T  21470976 tcggcagttaactaccgaggttttcctctgcggttaactgcagtcagtttttgaatacctcgacagttaactgccgagaagacaaaaacgtattttactt 21470877  T
Q  282 atgtgtctca 291  Q
     |||| ||||    
T  21470876 gtgtgcctca 21470867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 181 - 280
Target Start/End: Complemental strand, 11494617 - 11494519
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||||||||||||||  |||||||||||||| |||||||||||| ||||| |||||||||||| ||||||| |||||||  |||||||||||||||||||    
T  11494617 ttcggcagttaactaccgaggttttcctcggcagttaactgcagccggtt-ttgaattcctcgacagttaattgccgaggggacaaaaacgtattttact 11494519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 51426611 - 51426493
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||||||| ||||||||| ||||| | |||||||||| || || |||||||||||| |||||||||| ||| | |||||||||||||||||||    
T  51426611 ttcggcagttaactactgaggtttttctcggcaattaactgcagccgatttttgaattcctcgacagttaactgtcgaaaggacaaaaacgtattttact 51426512  T
Q  281 tatgtgtctcagccctatg 299  Q
    | |||| || |||| ||||    
T  51426511 tgtgtgcctaagccttatg 51426493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 49572899 - 49573018
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||| ||||| ||||  |||||||||||||| |||||||||||| || ||||||||||||||| |||||||||| |||   | |||||||||||||||||    
T  49572899 ttcgacagtttactaccgaggttttcctcggcagttaactgcagccgattattgaattcctcgacagttaactgtcgatggggcaaaaacgtattttact 49572998  T
Q  281 tatgtgtctcagccctatgc 300  Q
    | |||| ||||||| |||||    
T  49572999 tgtgtgcctcagccttatgc 49573018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 202 - 299
Target Start/End: Original strand, 21472504 - 21472601
Alignment:
Q  202 ttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagccctatg 299  Q
    |||||||||| |||||||||||| || || ||||||||||||||||||||||||||||  | |||||||||||||||||  ||| |||||||| ||||    
T  21472504 ttttcctcggcagttaactgcagccgatttttgaattcctcggcagttaactgccgaggcggcaaaaacgtattttactcgtgtttctcagccttatg 21472601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 291
Target Start/End: Complemental strand, 955866 - 955756
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||||||||||||||  |||||||| ||||| |||||||||||| || || ||||||||||| ||||||||||||| |   | |||||||||||||||||    
T  955866 ttcggcagttaactaccgaggtttttctcggcagttaactgcagccgatttttgaattcctcagcagttaactgccaaagaggcaaaaacgtattttact 955767  T
Q  281 tatgtgtctca 291  Q
    | |||| ||||    
T  955766 tgtgtgcctca 955756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 37959719 - 37959837
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||||||||||||||  || ||||||||||| ||||||||||||  ||||||| ||||||||  |||||||||||||||  |  ||||||||||||||||    
T  37959719 ttcggcagttaactaccgatgttttcctcggcagttaactgcagctggttattaaattcctcaacagttaactgccgagggggtaaaaacgtattttact 37959818  T
Q  281 tatgtgtctcagccctatg 299  Q
      |||| ||||||| ||||    
T  37959819 cgtgtgcctcagccttatg 37959837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 286
Target Start/End: Complemental strand, 33383879 - 33383774
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||||||   |||||||||||||| |||||||||||||||||| || || |||||| || |||||| |||||| | |||||| ||||||||||    
T  33383879 ttcggcagttaacttccgaggttttcctcggcagttaactgcagtcggtttttaaaatcctcgacaattaactaccgagaaggcaaaaatgtattttact 33383780  T
Q  281 tatgtg 286  Q
    | ||||    
T  33383779 tgtgtg 33383774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 44561330 - 44561447
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  ||| ||||||||||||||||||||||| ||||| || | || |||||||||||||  |||||| | ||||| |||||||||||     
T  44561330 tcggcagttaactaccgagattttcctcggtagttaactgcagccggttttttatttactcggcagttaacaaccgagagggcaaaatcgtattttactc 44561429  T
Q  282 atgtgtctcagccctatg 299  Q
     ||| |||||||| ||||    
T  44561430 gtgtttctcagccttatg 44561447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 182 - 280
Target Start/End: Complemental strand, 9890067 - 9889969
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||||||  |||||||||||||| |||||||||||| ||| | |  |||||||||||||||||||||||||  |  |||| |||||||||||    
T  9890067 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggtaaaatcgtattttact 9889969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 15995795 - 15995718
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    ||||||||||||||  |||||||||||||| |||||||||||| ||| | |  |||||||||||| ||||||||||||    
T  15995795 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcatttaactgccgag 15995718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 17342215 - 17342142
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    ||||||||||||||  || ||||| |||||||||||||||||| || ||  |||||||||||||||||||||||    
T  17342215 tcggcagttaactaccgaagtttttctcggtagttaactgcagccgatttatgaattcctcggcagttaactgc 17342142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 19069260 - 19069183
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    ||||||||||||||  |||||||||||||| |||||||||||| ||| | |  |||||||||||| ||||||||||||    
T  19069260 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcatttaactgccgag 19069183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 34503782 - 34503709
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    ||||||||||||||  || ||||| ||||||||||||||||||  ||||  |||||||||||||||||||||||    
T  34503782 tcggcagttaactaccgaagtttttctcggtagttaactgcagctggtttatgaattcctcggcagttaactgc 34503709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 1042008 - 1041932
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccga 258  Q
    ||||||||||||||  ||| |||| ||||| |||||||||||||||| | |  ||||||||||||||||||||||||    
T  1042008 tcggcagttaactaccgagatttttctcggcagttaactgcagtcggatttctaattcctcggcagttaactgccga 1041932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 201 - 299
Target Start/End: Complemental strand, 18578703 - 18578605
Alignment:
Q  201 gttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagccctatg 299  Q
    ||||| ||||| || ||||||||| || || |||||||||||| |||||||||||| ||  | |||||| ||||||||||| |||||||| ||| ||||    
T  18578703 gtttttctcggcagataactgcagccgttttttgaattcctcgacagttaactgccaaggaggcaaaaatgtattttacttgtgtgtctctgccatatg 18578605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 291
Target Start/End: Complemental strand, 34151688 - 34151573
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagt----taactgccgagatgacaaaaacgta-tt 275  Q
    |||||||||| ||||  |||||||||||||| |||||||||||| || || ||||||| ||||||| |    |||||||||||  | |||||||||| ||    
T  34151688 ttcggcagtttactaccgaggttttcctcggcagttaactgcagccgatttttgaattactcggcatttaactaactgccgaggaggcaaaaacgtattt 34151589  T
Q  276 ttacttatgtgtctca 291  Q
    ||||||||||| ||||    
T  34151588 ttacttatgtgcctca 34151573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 279
Target Start/End: Original strand, 34154433 - 34154499
Alignment:
Q  213 agttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttac 279  Q
    |||||||||||| ||||| || ||||||||||||||||||||||||   |||||||| |||||||||    
T  34154433 agttaactgcagccggttttttaattcctcggcagttaactgccgatgggacaaaaatgtattttac 34154499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 182 - 300
Target Start/End: Original strand, 44051092 - 44051210
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  |||| ||||||||| |||||||||||| |||||  | | |||||||||||||||| |||||   | ||||||||||  |||||     
T  44051092 tcggcagttaactaccgaggatttcctcgggagttaactgcagccggtttcttatttcctcggcagttaaccgccgatggggcaaaaacgtaaattactg 44051191  T
Q  282 atgtgtctcagccctatgc 300  Q
     |||| ||||||| |||||    
T  44051192 gtgtgcctcagccttatgc 44051210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 15999799 - 15999876
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    ||||||||||||||  |||||||||||||| |||||| ||||| ||| | |  |||| ||||||||||||||||||||    
T  15999799 tcggcagttaactaccgaggttttcctcggcagttaattgcagccggatttcaaatttctcggcagttaactgccgag 15999876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 16984161 - 16984238
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    ||||||||||||||| |||||||||||||| |||||||||||| ||| | |  ||  | |||||||||||||||||||    
T  16984161 tcggcagttaactatcgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgag 16984238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 19994310 - 19994362
Alignment:
Q  203 tttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    ||||||||| ||||||||||||||| ||  |||||||||||||||||||||||    
T  19994310 tttcctcgggagttaactgcagtcgttttatgaattcctcggcagttaactgc 19994362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 273
Target Start/End: Complemental strand, 6280926 - 6280839
Alignment:
Q  186 cagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgta 273  Q
    ||||||||||  || ||||||||| ||| |||||||||| ||||| || ||||| | | |||||||||||||||| | ||||||||||    
T  6280926 cagttaactaccgatgttttcctcagtatttaactgcagccggtttttaaattctttgacagttaactgccgagagggcaaaaacgta 6280839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 298
Target Start/End: Complemental strand, 50274812 - 50274717
Alignment:
Q  203 tttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagccctat 298  Q
    ||||||||| |||||||||||| ||| | |  |||||||||||||||||||||||||  | ||||||||||  |||||  |||| | |||||||||    
T  50274812 tttcctcggcagttaactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaaacgtaaattactcgtgtgccacagccctat 50274717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 280
Target Start/End: Complemental strand, 56138325 - 56138222
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcgg-----ttattgaattcctcggcagttaactgccgagatgacaaaaacgtattt 276  Q
    |||||||||||||| ||||||||||||||| |||||||||||| |||     | ||| |||| ||||||||||||||| |||   | ||||| |||||||    
T  56138325 tcggcagttaactactgaggttttcctcggcagttaactgcagccggatttttaatttaatttctcggcagttaactgtcgaaggggcaaaatcgtattt 56138226  T
Q  277 tact 280  Q
    ||||    
T  56138225 tact 56138222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 20208580 - 20208506
Alignment:
Q  185 gcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    |||||||||||  |||||||||||||| |||||||||||| ||||| | | |  | |||||||||||||||||||    
T  20208580 gcagttaactaccgaggttttcctcggcagttaactgcagccggttctagtaaacttcggcagttaactgccgag 20208506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 294
Target Start/End: Complemental strand, 8109461 - 8109352
Alignment:
Q  185 gcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatg 284  Q
    ||||||||||   |||||||||||||| ||||||||| || ||| |||| ||||||||| ||||||||| || ||  |  |||| |||||||||||  ||    
T  8109461 gcagttaactcccgaggttttcctcggcagttaactgtagccggatatttaattcctcgacagttaactaccaagggggtaaaatcgtattttactcgtg 8109362  T
Q  285 tgtctcagcc 294  Q
    | ||||||||    
T  8109361 tttctcagcc 8109352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 17343402 - 17343475
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    ||||||||||||||  || |||||| |||||| |||||||||  |||||  ||||||||||| |||||||||||    
T  17343402 tcggcagttaactacagaagttttcttcggtaattaactgcaaccggtttatgaattcctcgacagttaactgc 17343475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 55407793 - 55407858
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcag 247  Q
    ||||||||||||||  ||| |||||||||| |||||||||||| ||| | || |||||||||||||    
T  55407793 tcggcagttaactaccgagattttcctcggcagttaactgcagccggatttttaattcctcggcag 55407858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 3403900 - 3403844
Alignment:
Q  202 ttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccga 258  Q
    |||||||||| |||||||||||| ||| | |  ||||||||||||||||||||||||    
T  3403900 ttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 3403844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 4768726 - 4768674
Alignment:
Q  207 ctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    ||||| |||||||||||| | | | ||||||||||||||||||||||||||||    
T  4768726 ctcggcagttaactgcagccagattttgaattcctcggcagttaactgccgag 4768674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 9472910 - 9472858
Alignment:
Q  203 tttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    |||||||||||||||||||||| | |||  |||||||||| ||||||||||||    
T  9472910 tttcctcggtagttaactgcagccagtttatgaattcctcagcagttaactgc 9472858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 41933622 - 41933670
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggtt 230  Q
    ||||||||||||||  |||||||| |||||||||||||||||| |||||    
T  41933622 tcggcagttaactaccgaggtttttctcggtagttaactgcagccggtt 41933670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 9473663 - 9473734
Alignment:
Q  184 ggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    ||||||||||||  ||  ||||||||||||||||||||||| || ||  ||||||||||| || ||||||||    
T  9473663 ggcagttaactaccgaaattttcctcggtagttaactgcagccgatttatgaattcctcgacaattaactgc 9473734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 272
Target Start/End: Complemental strand, 39588142 - 39588075
Alignment:
Q  205 tcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgt 272  Q
    ||||||| |||||||||||||||  | |  |||||||||||||||||||||||||  | |||||||||    
T  39588142 tcctcggcagttaactgcagtcgaatttctaattcctcggcagttaactgccgagggggcaaaaacgt 39588075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 249
Target Start/End: Original strand, 48256568 - 48256635
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagtt 249  Q
    |||||||||||||| ||| ||||||||||| |||||||||||| ||| | || ||||| || ||||||    
T  48256568 tcggcagttaactactgaagttttcctcggcagttaactgcagccggatttttaattcttctgcagtt 48256635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 6178110 - 6178152
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    ||||||||||||||  |||||||||||||| ||||||||||||    
T  6178110 tcggcagttaactaccgaggttttcctcggcagttaactgcag 6178152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 21022888 - 21022930
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    ||||||||||||||  |||||||||||||| ||||||||||||    
T  21022888 tcggcagttaactaccgaggttttcctcggcagttaactgcag 21022930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 26791724 - 26791674
Alignment:
Q  180 cttcggcagttaactattgaggttttcctcggtagttaactgcagtcggtt 230  Q
    |||||||||||||||   |||||||| |||||||||||||||||| |||||    
T  26791724 cttcggcagttaactgccgaggtttttctcggtagttaactgcagccggtt 26791674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 37022061 - 37022103
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    |||||||||||||   |||||||||||||||||||||||||||    
T  37022061 tcggcagttaactgccgaggttttcctcggtagttaactgcag 37022103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 39590568 - 39590610
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    ||||||||||||||  |||||||||||||| ||||||||||||    
T  39590568 tcggcagttaactaccgaggttttcctcggcagttaactgcag 39590610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 256
Target Start/End: Complemental strand, 41023459 - 41023385
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgcc 256  Q
    ||||||||||||||  |||| ||||||| | |||||||||||| ||| | |  |||| |||||||||||||||||    
T  41023459 tcggcagttaactaccgaggatttcctcagcagttaactgcagccggatttcaaatttctcggcagttaactgcc 41023385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 41795356 - 41795398
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    ||||||||||||||  |||||||||||||| ||||||||||||    
T  41795356 tcggcagttaactaacgaggttttcctcggcagttaactgcag 41795398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 49094157 - 49094115
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    ||||||||||||||  |||||||||||||| ||||||||||||    
T  49094157 tcggcagttaactaccgaggttttcctcggcagttaactgcag 49094115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 4979917 - 4979994
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    ||||||||||||||  ||   ||||||| | |||||||||||| ||||| ||||| || ||| |||||||||||||||    
T  4979917 tcggcagttaactaccgataatttcctcagcagttaactgcagccggtttttgaaatcgtcgacagttaactgccgag 4979994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 9013909 - 9013872
Alignment:
Q  185 gcagttaactattgaggttttcctcggtagttaactgc 222  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  9013909 gcagttaactatcgaggttttcctcggcagttaactgc 9013872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 230
Target Start/End: Original strand, 9655928 - 9655957
Alignment:
Q  201 gttttcctcggtagttaactgcagtcggtt 230  Q
    ||||||||||||||||||||||||||||||    
T  9655928 gttttcctcggtagttaactgcagtcggtt 9655957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 21538494 - 21538539
Alignment:
Q  187 agttaactattgaggttttcctcggtagttaactgcagtcggttat 232  Q
    ||||||||  ||| ||||||||| ||||||||||||||||||||||    
T  21538494 agttaactgctgaagttttcctcagtagttaactgcagtcggttat 21538539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 260
Target Start/End: Complemental strand, 44010616 - 44010559
Alignment:
Q  203 tttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgaga 260  Q
    |||||||||||||||||||||||||||| |  | |||| || ||||||||| ||||||    
T  44010616 tttcctcggtagttaactgcagtcggttttaaacttccacgacagttaactaccgaga 44010559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 253
Target Start/End: Original strand, 6283464 - 6283512
Alignment:
Q  205 tcctcggtagttaactgcagtcggttattgaattcctcggcagttaact 253  Q
    ||||||| |||||||||||| ||||| ||||||||  ||||||||||||    
T  6283464 tcctcggcagttaactgcagccggtttttgaattctgcggcagttaact 6283512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 30726741 - 30726781
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  30726741 tcggcagttaactaccgaggttttcctcggcagttaactgc 30726781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 31425318 - 31425358
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  31425318 tcggcagttaactaccgaggttttcctcggcagttaactgc 31425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 36480540 - 36480588
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggtt 230  Q
    |||| |||||||||  || |||||||||||||||||||||||| |||||    
T  36480540 tcggtagttaactaccgaagttttcctcggtagttaactgcagccggtt 36480588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 37563280 - 37563320
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  37563280 tcggcagttaactaccgaggttttcctcggcagttaactgc 37563320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 39773477 - 39773437
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  39773477 tcggcagttaactaccgaggttttcctcggcagttaactgc 39773437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 40358280 - 40358320
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  40358280 tcggcagttaactaccgaggttttcctcggcagttaactgc 40358320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 273
Target Start/End: Original strand, 50278817 - 50278889
Alignment:
Q  201 gttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgta 273  Q
    ||||||||||| |||||||||||| ||| | |  ||||| ||| |||||||||| ||||  ||||||||||||    
T  50278817 gttttcctcggcagttaactgcagccggatttctaattcatcgacagttaactgtcgaggggacaaaaacgta 50278889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 54634015 - 54634055
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  54634015 tcggcagttaactaccgaggttttcctcggcagttaactgc 54634055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 2917757 - 2917639
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||| |||||||||| ||||||||||||||| ||||||||| || ||||| || |||| ||||||||||||||||||||  | |||||||||||||||||    
T  2917757 ttcgacagttaactactgaggttttcctcggcagttaactgtagccggtttttcaatttctcggcagttaactgccgagggggcaaaaacgtattttact 2917658  T
Q  281 tatgtgtctcagccctatg 299  Q
    | |||| ||||||| ||||    
T  2917657 tttgtgcctcagccttatg 2917639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 45475513 - 45475396
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    |||| |||||||||  |||||||||||||| ||||||||| || ||||| ||||||| ||||||||||||||||||||  | ||||| ||||||||||||    
T  45475513 tcggaagttaactaccgaggttttcctcggcagttaactgtagccggtttttgaatttctcggcagttaactgccgagggggcaaaatcgtattttactt 45475414  T
Q  282 atgtgtctcagccctatg 299  Q
     |||||||||||| ||||    
T  45475413 gtgtgtctcagccttatg 45475396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 19187223 - 19187340
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  |||||||||||||| || ||||||||   || | ||||||| ||||||||||||||||||||  | ||||||||||||||||||    
T  19187223 tcggcagttaactaccgaggttttcctcggcaggtaactgcaactggattttgaatttctcggcagttaactgccgagggggcaaaaacgtattttactt 19187322  T
Q  282 atgtgtctcagccctatg 299  Q
     |||||||||||| ||||    
T  19187323 gtgtgtctcagccttatg 19187340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 201 - 300
Target Start/End: Complemental strand, 41181491 - 41181392
Alignment:
Q  201 gttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagccctatgc 300  Q
    ||||||||||| |||||| || || ||||||||||||||||||||||||||||||||||  | |||||||||||||||||  |||| ||||||| |||||    
T  41181491 gttttcctcggcagttaaatgtagccggttattgaattcctcggcagttaactgccgagggggcaaaaacgtattttactcgtgtgcctcagccttatgc 41181392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 277
Target Start/End: Complemental strand, 2648852 - 2648776
Alignment:
Q  201 gttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtatttt 277  Q
    |||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||| | ||||| ||||||||    
T  2648852 gttttcctcggtagttaactgcagccggtttttgaattccttggcagttaactgccgagagggcaaaagcgtatttt 2648776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 35493340 - 35493459
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||||||||||||||  ||  |||||||||| ||||||||||||  |||| |||||||||||||||||||||| |||||  | ||||| |||||||||||    
T  35493340 ttcggcagttaactaccgatattttcctcggcagttaactgcagctggtttttgaattcctcggcagttaactaccgagggggcaaaagcgtattttact 35493439  T
Q  281 tatgtgtctcagccctatgc 300  Q
      ||||||||| || |||||    
T  35493440 cgtgtgtctcaaccttatgc 35493459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 269
Target Start/End: Original strand, 9660055 - 9660142
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaa 269  Q
    |||||| |||||||   ||||||||||||| ||| |||||||| ||||||||| ||||||||||||||||||||||||| | ||||||    
T  9660055 tcggcaattaactaccaaggttttcctcggcagtcaactgcagccggttattgtattcctcggcagttaactgccgagagggcaaaaa 9660142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 280
Target Start/End: Original strand, 23409500 - 23409599
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||||||||| |||   |||||||||||||| |||||||||||| | ||| ||||||||||||||| ||||||||||||| | ||||  |||||||||||    
T  23409500 ttcggcagtttacttccgaggttttcctcggcagttaactgcagccagtttttgaattcctcggcaattaactgccgagagggcaaacgcgtattttact 23409599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 182 - 280
Target Start/End: Original strand, 25184830 - 25184927
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||||||  |||||||||||||| |||||||||||| ||||| |  ||||||||| ||||||||||| |||  | |||||||||||||||||    
T  25184830 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggtt-tcaaattcctcgacagttaactgctgagggggcaaaaacgtattttact 25184927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 182 - 280
Target Start/End: Original strand, 34921759 - 34921856
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||||||  |||||||||||| | |||||||||||| ||||| ||||||| |||||||||||||| ||| |  | |||||||||||||||||    
T  34921759 tcggcagttaactaccgaggttttcctcagcagttaactgcagccggtttttgaatttctcggcagttaactaccg-gggggcaaaaacgtattttact 34921856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 35490753 - 35490635
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||   |||||||| || | |||||||||||| ||||| |||||||| |||||||||||| | ||||  | |||||| ||||||||||     
T  35490753 tcggcagttaactaccaaggttttcttcagcagttaactgcagccggtttttgaattcttcggcagttaaccgtcgaggaggcaaaaatgtattttactc 35490654  T
Q  282 atgtgtctcagccctatgc 300  Q
     |||||||||||| |||||    
T  35490653 gtgtgtctcagccttatgc 35490635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 300
Target Start/End: Complemental strand, 41497540 - 41497427
Alignment:
Q  187 agttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtg 286  Q
    |||||||||  |||||||||||||| | |||||||||| ||||| |||||||| ||||||||||| || |||| || ||||||||||  |||||  ||||    
T  41497540 agttaactaccgaggttttcctcggcaattaactgcagccggtttttgaattcttcggcagttaagtgtcgaggtggcaaaaacgtaaattactcgtgtg 41497441  T
Q  287 tctcagccctatgc 300  Q
     ||||||| |||||    
T  41497440 cctcagccttatgc 41497427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 26543529 - 26543464
Alignment:
Q  7 gtttggaggtggattttgttgctcttcttctgttacttcttgcaaagtgtagcacagtgtttgatttg 74  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||| |||||  ||||||||||||||    
T  26543529 gtttggatgtggattttgttgctcttcttctgttacctcttgcaaaatgtag--cagtgtttgatttg 26543464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 299
Target Start/End: Complemental strand, 19186805 - 19186703
Alignment:
Q  197 tgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagccct 296  Q
    ||||||||||||  | |||||||||||| || || ||||||| |||||||||| ||||||||   |  ||||||||||||||||| |||||||||||| |    
T  19186805 tgaggttttccttagcagttaactgcagccgctttttgaattgctcggcagtttactgccgatggggtaaaaacgtattttacttgtgtgtctcagcctt 19186706  T
Q  297 atg 299  Q
    |||    
T  19186705 atg 19186703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 28342596 - 28342478
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||   ||  ||||||||| |||||| ||||| ||||| |||||||| ||| ||||||||||||||   | ||||||||||  ||||||    
T  28342596 tcggcagttaactaccaagaatttcctcggcagttaattgcagccggtttttgaattcttcgacagttaactgccgaaggggcaaaaacgtaaattactt 28342497  T
Q  282 atgtgtctcagccctatgc 300  Q
    |||||||| |||| |||||    
T  28342496 atgtgtcttagccttatgc 28342478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 298
Target Start/End: Original strand, 12908429 - 12908545
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatga-caaaaacgtattttact 280  Q
    |||||||||||||||  ||||||||||||| |||||||||||| |  || ||||||| |||| |||||||||||||| ||||  ||||  |||||||||     
T  12908429 tcggcagttaactatcaaggttttcctcggcagttaactgcagccaatttttgaatttctcgacagttaactgccga-atgaggaaaattgtattttaca 12908527  T
Q  281 tatgtgtctcagccctat 298  Q
    | |||| |||||||||||    
T  12908528 tgtgtgcctcagccctat 12908545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 185 - 254
Target Start/End: Complemental strand, 17911243 - 17911174
Alignment:
Q  185 gcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactg 254  Q
    ||||||||||  ||||||||||||||||| |||||||||| ||||| | || ||||||||||||||||||    
T  17911243 gcagttaactgctgaggttttcctcggtaattaactgcagccggttttggacttcctcggcagttaactg 17911174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 41183224 - 41183300
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    ||||||||||||||  ||||||||||||||||||||||||||| ||||| |  ||||| ||||||||||| |||||||    
T  41183224 tcggcagttaactaccgaggttttcctcggtagttaactgcagccggtt-tcaaattcttcggcagttaattgccgag 41183300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 41500234 - 41500351
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  |||||||| ||||| |||||||||||| ||| | |||||||| | |  ||||||||||||||  | ||||| |||||||||||     
T  41500234 tcggcagttaactaccgaggtttttctcggcagttaactgcagccggattttgaattctttgatagttaactgccgagggggcaaaagcgtattttactc 41500333  T
Q  282 atgtgtctcagccctatg 299  Q
     ||| |||||||| ||||    
T  41500334 gtgtttctcagccatatg 41500351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 42177214 - 42177287
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    ||||||||||||||  || |||||||| |||||||||| |||| |||||  |||||||||||||||||||||||    
T  42177214 tcggcagttaactaccgaagttttcctaggtagttaacagcagccggtttatgaattcctcggcagttaactgc 42177287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 290
Target Start/End: Original strand, 41008928 - 41009035
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  || ||||||||||| |||||| ||||| ||||||   |||||||||||||||||||||||||  | ||||||||||  |||||     
T  41008928 tcggcagttaactaccgaagttttcctcggcagttaaatgcagccggttaca-aattcctcggcagttaactgccgaggaggcaaaaacgtaaattactc 41009026  T
Q  282 atgtgtctc 290  Q
     ||||||||    
T  41009027 gtgtgtctc 41009035  T

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Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 254
Target Start/End: Complemental strand, 43491182 - 43491110
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactg 254  Q
    ||||||||||||||   ||||||||||||  |||||| ||||| |||||||| ||||||||||||||||||||    
T  43491182 tcggcagttaactaccaaggttttcctcgacagttaattgcagccggttattaaattcctcggcagttaactg 43491110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 294
Target Start/End: Original strand, 43950263 - 43950353
Alignment:
Q  203 tttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagcc 294  Q
    ||||||||| |||||| ||||||||||| ||||||||| | ||||||||||||||||  | |||||| ||||||||||  ||| ||||||||    
T  43950263 tttcctcggcagttaattgcagtcggtt-ttgaattccacagcagttaactgccgagggggcaaaaatgtattttactcgtgtttctcagcc 43950353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 182 - 280
Target Start/End: Original strand, 45137433 - 45137531
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||||||| || |||||| |||| |||||||||||| ||  | || |||||||||||| ||||||||| ||  | ||||| |||||||||||    
T  45137433 tcggcagttaactatcgaagttttcatcggcagttaactgcagccgaatttttaattcctcggcaattaactgccaaggaggcaaaatcgtattttact 45137531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 14181838 - 14181895
Alignment:
Q  198 gaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    |||||||||| ||| |||||||||||| ||||| |||||||||| |||||||||||||    
T  14181838 gaggttttccacggcagttaactgcagacggtttttgaattccttggcagttaactgc 14181895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 24512240 - 24512123
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  ||||||||  |||| | ||||||||||  |||| || ||||||||  |||||||||| ||||  |  |||||||||||||||||    
T  24512240 tcggcagttaactaccgaggtttttttcggcaattaactgcagctggttttttaattcctcaacagttaactgtcgagggggtaaaaacgtattttactt 24512141  T
Q  282 atgtgtctcagccctatg 299  Q
     ||| |||||||| ||||    
T  24512140 gtgtttctcagccatatg 24512123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 43943762 - 43943689
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    ||||||||||||||  ||| |||||||||  |||||||||||| |||||||| |||||||||  ||||||||||    
T  43943762 tcggcagttaactaccgagtttttcctcgacagttaactgcagccggttattaaattcctcgagagttaactgc 43943689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 285
Target Start/End: Original strand, 8268748 - 8268852
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||||||   |||||||| |||| ||||||| ||||| || || ||| ||||||   |||||||||||||||  ||||||| |||||||||||    
T  8268748 ttcggcagttaactgccgaggtttttctcgatagttaattgcagccgatttttgcattccttaacagttaactgccgaggggacaaaatcgtattttact 8268847  T
Q  281 tatgt 285  Q
     ||||    
T  8268848 aatgt 8268852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 299
Target Start/End: Complemental strand, 12905597 - 12905505
Alignment:
Q  207 ctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagccctatg 299  Q
    ||||| |||||||||||| || || || |||| ||||||||||||||||||||  || |||| |||||||||||  ||| |||||||| ||||    
T  12905597 ctcggcagttaactgcagccgatttttcaatttctcggcagttaactgccgaggggaaaaaagcgtattttactcttgtttctcagccttatg 12905505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 24601712 - 24601636
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccga 258  Q
    ||||||||||||||  || | |||||||||||||||||||||| | ||| || ||||||||| ||||||||| ||||    
T  24601712 tcggcagttaactaccgaagatttcctcggtagttaactgcagccagtttttaaattcctcgacagttaactaccga 24601636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 24612402 - 24612478
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccga 258  Q
    ||||||||||||||  || | |||||||||||||||||||||| | ||| || ||||||||| ||||||||| ||||    
T  24612402 tcggcagttaactaccgaagatttcctcggtagttaactgcagccagtttttaaattcctcgacagttaactaccga 24612478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 43493310 - 43493374
Alignment:
Q  235 aattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagccctatg 299  Q
    |||||||  ||||||||||||||||  | |||||||||||||||||| |||||||||||| ||||    
T  43493310 aattccttagcagttaactgccgagggggcaaaaacgtattttacttgtgtgtctcagccttatg 43493374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 280
Target Start/End: Original strand, 82265 - 82359
Alignment:
Q  185 gcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||||||||||  |||||||||||||  |||||||||||| ||||| |  |||| |||| ||||||||| |||||   ||||||||||||||||||    
T  82265 gcagttaactacggaggttttcctcgacagttaactgcagccggtt-tcaaattactcgacagttaactaccgaggaaacaaaaacgtattttact 82359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 273
Target Start/End: Complemental strand, 435415 - 435325
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgta 273  Q
    |||||||| |||||| ||||||||||||||||||| ||||||| || || |  ||||| |||||||||||||||| ||  | ||||||||||    
T  435415 tcggcagtcaactatcgaggttttcctcggtagtttactgcagccgatt-tcaaattcatcggcagttaactgccaagggggcaaaaacgta 435325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 280
Target Start/End: Complemental strand, 1096649 - 1096570
Alignment:
Q  201 gttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||| |||||||||||| ||| | |  |||||||||||||||||| ||||||  | ||||| |||||||||||    
T  1096649 gttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaacagccgagggggcaaaatcgtattttact 1096570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 23786144 - 23786085
Alignment:
Q  235 aattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagcc 294  Q
    |||||||||||||||||||||||||  ||||||| | ||||||||| |||| ||||||||    
T  23786144 aattcctcggcagttaactgccgaggggacaaaatcatattttactaatgtttctcagcc 23786085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 280
Target Start/End: Complemental strand, 1149529 - 1149447
Alignment:
Q  198 gaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||||||||||||  ||||||||||| |||| | |  |||||||||||||||||||||||||    ||||| |||||||||||    
T  1149529 gaggttttcctcgacagttaactgcaatcggatttcaaattcctcggcagttaactgccgagggagcaaaatcgtattttact 1149447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 280
Target Start/End: Complemental strand, 2648190 - 2648092
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||||| |||||||  ||| |||||||||| |||||||| ||  | |||||||||||||||| ||  |||||| ||||| |  ||||||||||||||||    
T  2648190 tcggcaattaactaccgagattttcctcggcagttaactacatacagttattgaattcctcgacaagtaactgtcgagacggaaaaaacgtattttact 2648092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 280
Target Start/End: Original strand, 27276390 - 27276472
Alignment:
Q  198 gaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||||||||||||| |||||||||||| ||| | |  |||||||| ||||||||||||||||  |  |||| |||||||||||    
T  27276390 gaggttttcctcggcagttaactgcagccggatttcaaattcctcagcagttaactgccgagggggtaaaatcgtattttact 27276472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 3795410 - 3795333
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    |||||||||||||    ||||||||||||| |||||||||||| ||| | |  ||||||||| |||||||||||||||    
T  3795410 tcggcagttaacttccaaggttttcctcggcagttaactgcagccggatttcaaattcctcgacagttaactgccgag 3795333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 26543988 - 26544037
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggtt 230  Q
    |||||||||||||||  |||||||||||| |||||||||||||| |||||    
T  26543988 ttcggcagttaactaccgaggttttcctcagtagttaactgcagccggtt 26544037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 38945815 - 38945758
Alignment:
Q  202 ttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    |||||||||| |||||||||||| ||| | |  |||||||||||||||||||||||||    
T  38945815 ttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgag 38945758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 41004601 - 41004525
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    ||||||||||||||  || |||||  |||| |||||||||||| ||||||   |||||||||||||||||||||||||    
T  41004601 tcggcagttaactaccgaagtttttttcggcagttaactgcagccggttaca-aattcctcggcagttaactgccgag 41004525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 23347328 - 23347404
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccga 258  Q
    |||||||||| |||  ||||||||||||||||||||||||||| ||| | |  ||  | ||||||||||||||||||    
T  23347328 tcggcagttagctaccgaggttttcctcggtagttaactgcagccggatttctaaaacttcggcagttaactgccga 23347404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 40221129 - 40221177
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggt 229  Q
    ||||||||||||||   ||||||||||||||||||||||||||| ||||    
T  40221129 ttcggcagttaactgccgaggttttcctcggtagttaactgcagccggt 40221177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 45479827 - 45479911
Alignment:
Q  215 ttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagccctatg 299  Q
    |||||| |||||| || || |||| |||||||||||||||||||||   ||||| ||||||||||| |||| ||| |||| ||||    
T  45479827 ttaactacagtcgattttttaatttctcggcagttaactgccgagagagcaaaatcgtattttactcatgtttctgagccttatg 45479911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 3803564 - 3803619
Alignment:
Q  203 tttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccga 258  Q
    ||||||||| |||||||||||| ||| | |  ||||||||||||||||||||||||    
T  3803564 tttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 3803619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 44100733 - 44100772
Alignment:
Q  183 cggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||| |||||||||| |||||||||||||||    
T  44100733 cggcagttaactactgaggttttcttcggtagttaactgc 44100772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 17424205 - 17424163
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    ||||||||||||||  |||||||||||||| ||||||||||||    
T  17424205 tcggcagttaactaccgaggttttcctcggcagttaactgcag 17424163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 29397983 - 29397937
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcgg 228  Q
    |||||||||||||   |||||||||||||| ||||||||||||||||    
T  29397983 tcggcagttaactcccgaggttttcctcggcagttaactgcagtcgg 29397937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 41565393 - 41565351
Alignment:
Q  180 cttcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    |||||||||||||||   |||||||||||||||||||||||||    
T  41565393 cttcggcagttaactgccgaggttttcctcggtagttaactgc 41565351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 43618648 - 43618598
Alignment:
Q  180 cttcggcagttaactattgaggttttcctcggtagttaactgcagtcggtt 230  Q
    |||||| ||||||||   ||||||||||||||||||||||||||| |||||    
T  43618648 cttcggtagttaactgccgaggttttcctcggtagttaactgcagccggtt 43618598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 43982272 - 43982230
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    ||||||||||||||  |||||||||||||| ||||||||||||    
T  43982272 tcggcagttaactaccgaggttttcctcggcagttaactgcag 43982230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 2983472 - 2983431
Alignment:
Q  183 cggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    ||||||||||||   |||||||||||||||||||||||||||    
T  2983472 cggcagttaactgccgaggttttcctcggtagttaactgcag 2983431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 230
Target Start/End: Original strand, 7780356 - 7780385
Alignment:
Q  201 gttttcctcggtagttaactgcagtcggtt 230  Q
    ||||||||||||||||||||||||||||||    
T  7780356 gttttcctcggtagttaactgcagtcggtt 7780385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 258
Target Start/End: Original strand, 20951069 - 20951122
Alignment:
Q  205 tcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccga 258  Q
    ||||||| |||||||||||| ||| | |  ||||||||||||||||||||||||    
T  20951069 tcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 20951122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 300
Target Start/End: Original strand, 24607589 - 24607686
Alignment:
Q  203 tttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagccctatgc 300  Q
    ||||||||| |||||||||||| ||||| || || || ||||||||||||||| |||  |  |||||||||  |||| | |||| ||||||| |||||    
T  24607589 tttcctcggcagttaactgcagccggttttttaaatcttcggcagttaactgctgagggggaaaaaacgtaaattacctgtgtgcctcagccttatgc 24607686  T

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Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 34639314 - 34639391
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    |||||||||||||   || ||||||||| | |||||||||||| ||| | || |||| ||||||||||| ||||||||    
T  34639314 tcggcagttaactcccgatgttttcctcagcagttaactgcagccggatttttaatttctcggcagttacctgccgag 34639391  T

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Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 17426365 - 17426405
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    |||||||||||||| ||||||||||||||| | ||||||||    
T  17426365 tcggcagttaactactgaggttttcctcggcacttaactgc 17426405  T

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Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 22003401 - 22003441
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  22003401 tcggcagttaactaccgaggttttcctcggcagttaactgc 22003441  T

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Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 24754040 - 24754092
Alignment:
Q  198 gaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagtta 250  Q
    ||||||||||||||||||||||||||| ||  | |  ||||||||||||||||    
T  24754040 gaggttttcctcggtagttaactgcagccgaatttcaaattcctcggcagtta 24754092  T

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Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 25515808 - 25515856
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggtt 230  Q
    |||| |||||||||  || || |||||||||||||||||||||||||||    
T  25515808 tcggaagttaactaccgaagtcttcctcggtagttaactgcagtcggtt 25515856  T

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Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 28468714 - 28468674
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  28468714 tcggcagttaactaccgaggttttcctcggcagttaactgc 28468674  T

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Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 28477069 - 28477109
Alignment:
Q  184 ggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    ||||||||||||  |||||||||||||| ||||||||||||    
T  28477069 ggcagttaactaccgaggttttcctcggcagttaactgcag 28477109  T

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Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 40055433 - 40055373
Alignment:
Q  199 aggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    |||||||||||||||||||||||||| ||||| | |  |||||||  ||||||||| ||||    
T  40055433 aggttttcctcggtagttaactgcagccggttttagttttcctcgatagttaactgtcgag 40055373  T

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Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 230
Target Start/End: Original strand, 41566181 - 41566213
Alignment:
Q  198 gaggttttcctcggtagttaactgcagtcggtt 230  Q
    ||||||||||||||||||||| |||||||||||    
T  41566181 gaggttttcctcggtagttaattgcagtcggtt 41566213  T

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Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 43258733 - 43258809
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccga 258  Q
    ||||||||||||||   | |||||| ||||||||||||||||| ||||| ||  |  | ||||||||||||||||||    
T  43258733 tcggcagttaactaccaaagttttcttcggtagttaactgcagccggttttttcaaacttcggcagttaactgccga 43258809  T

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Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 43536175 - 43536127
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggtt 230  Q
    ||||||||||||||  |||||||||||||| |||||||||  |||||||    
T  43536175 tcggcagttaactaccgaggttttcctcggcagttaactgtcgtcggtt 43536127  T

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Target: chr6 (Bit Score: 62; Significance: 9e-27; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 12783957 - 12784074
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    |||||||||||||| ||||||||||||||  || ||||||||| |||||||||||||| ||||||||||||||||||   | ||||| ||||||||||||    
T  12783957 tcggcagttaactactgaggttttcctcgacagctaactgcagccggttattgaattcatcggcagttaactgccgatggggcaaaagcgtattttactt 12784056  T
Q  282 atgtgtctcagccctatg 299  Q
     |||| ||||||| ||||    
T  12784057 gtgtgcctcagccttatg 12784074  T

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Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 182 - 294
Target Start/End: Complemental strand, 23958963 - 23958851
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  |||||||||||||| | |||||||||| ||||| | ||||| ||||||||||||||||||||  ||||||||||||||||| ||    
T  23958963 tcggcagttaactaccgaggttttcctcggcatttaactgcagccggttttggaatttctcggcagttaactgccgaggggacaaaaacgtattttagtt 23958864  T
Q  282 atgtgtctcagcc 294  Q
      |||||||||||    
T  23958863 gggtgtctcagcc 23958851  T

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Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 13404631 - 13404750
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||||||||||||||   ||||||||| ||| ||||||||||||  ||||||||||||||||| ||||||||| |||||  | ||||  |||||||||||    
T  13404631 ttcggcagttaactaccaaggttttccacggcagttaactgcagcaggttattgaattcctcgacagttaactaccgagggggcaaacgcgtattttact 13404730  T
Q  281 tatgtgtctcagccctatgc 300  Q
    | |||| ||| ||| |||||    
T  13404731 tgtgtgcctcggccttatgc 13404750  T

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Target: chr6; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 299
Target Start/End: Original strand, 23986012 - 23986098
Alignment:
Q  213 agttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagccctatg 299  Q
    |||||||||||  ||||| ||||||| ||||||||||||||||| ||  | |||||||||||||||||| |||||||||||| ||||    
T  23986012 agttaactgcaaccggtttttgaatttctcggcagttaactgccaagggggcaaaaacgtattttacttgtgtgtctcagccttatg 23986098  T

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Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 31768826 - 31768749
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    ||||||||||||||  |||||||||||||| | |||||||||| ||| | || |||||||||||||||||||||||||    
T  31768826 tcggcagttaactaccgaggttttcctcggcaattaactgcagccggatttttaattcctcggcagttaactgccgag 31768749  T

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Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 28362734 - 28362804
Alignment:
Q  185 gcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    |||||||||||| |||||||||||||| |||||||||||| ||| | |  |||||||||||||||||||||    
T  28362734 gcagttaactatcgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgc 28362804  T

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Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 294
Target Start/End: Complemental strand, 18606117 - 18606006
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||| ||  |||||||||||||| |||||||||||| ||||  |  ||||||| ||||||||||| |||||  | |||||||||||||||||     
T  18606117 tcggcagttaagtaccgaggttttcctcggcagttaactgcagccggtg-tcaaattcctaggcagttaactaccgagggggcaaaaacgtattttactc 18606019  T
Q  282 atgtgtctcagcc 294  Q
     |||| |||||||    
T  18606018 gtgtgcctcagcc 18606006  T

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Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 32643523 - 32643598
Alignment:
Q  184 ggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    ||||||||||||  |||||||||||||  |||||||||||| ||| | || ||||||| |||||||||||||||||    
T  32643523 ggcagttaactaccgaggttttcctcgacagttaactgcagccggatttttaattccttggcagttaactgccgag 32643598  T

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Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 8193209 - 8193282
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    ||||||||||||| | || ||||||||||| |||||||||||| ||  | || |||||||||||||||||||||    
T  8193209 tcggcagttaactgtcgaagttttcctcggcagttaactgcagccgtgtttttaattcctcggcagttaactgc 8193282  T

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Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 294
Target Start/End: Original strand, 35021282 - 35021375
Alignment:
Q  201 gttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagcc 294  Q
    ||||||||||| |||||||||||| ||||| |||||||| || ||| ||||||||||||  | |||||  ||||||||||  ||| ||||||||    
T  35021282 gttttcctcggcagttaactgcagccggtttttgaattcttccgcatttaactgccgagggggcaaaagtgtattttactcgtgtttctcagcc 35021375  T

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Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 9048148 - 9048072
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccga 258  Q
    ||||||||||||||  || |||||||||||||||||||||||| ||||| ||  |  | ||||||||||||||||||    
T  9048148 tcggcagttaactaccgaagttttcctcggtagttaactgcagccggttttttcaaacttcggcagttaactgccga 9048072  T

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Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 294
Target Start/End: Complemental strand, 7537245 - 7537159
Alignment:
Q  208 tcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagcc 294  Q
    ||||||||||||||||| ||||| || ||||||||| || ||||||||||||  | ||||||||||  |||||  |||| |||||||    
T  7537245 tcggtagttaactgcagccggttttttaattcctcgacaattaactgccgagggggcaaaaacgtaaattactcgtgtgcctcagcc 7537159  T

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Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 299
Target Start/End: Complemental strand, 13479768 - 13479682
Alignment:
Q  213 agttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagccctatg 299  Q
    ||||||||||||  |||| ||||||||| || ||||||||| |||||  | ||||| |||||||||||| |||| ||||||| ||||    
T  13479768 agttaactgcagctggtttttgaattccccgacagttaactaccgagggggcaaaagcgtattttacttgtgtgcctcagccttatg 13479682  T

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Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 273
Target Start/End: Complemental strand, 7361258 - 7361173
Alignment:
Q  188 gttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgta 273  Q
    ||||||||  |||| ||||||||| |||||||||||| ||||| || || ||||| |||||||| ||||||   ||||||||||||    
T  7361258 gttaactaccgaggatttcctcggcagttaactgcagccggtttttaaaatcctcagcagttaattgccgacgggacaaaaacgta 7361173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 31146446 - 31146373
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    ||||||||||||||  || ||||||||||  |||||||||||| ||| | |  |||||||||||||||||||||    
T  31146446 tcggcagttaactaccgatgttttcctcgacagttaactgcagccggatttcaaattcctcggcagttaactgc 31146373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 280
Target Start/End: Complemental strand, 2051098 - 2051004
Alignment:
Q  185 gcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatga-caaaaacgtattttact 280  Q
    |||| ||||||  |||||||||||||| |||||||||||  ||||| |  ||||| |||||||||||||||||| | || |||||||||||||||||    
T  2051098 gcagataactaccgaggttttcctcggcagttaactgcaaccggtt-tcaaattcatcggcagttaactgccga-aggagcaaaaacgtattttact 2051004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 9049084 - 9049132
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggtt 230  Q
    ||||||||||||||  || |||||||||||||||||||||||| |||||    
T  9049084 tcggcagttaactaccgaagttttcctcggtagttaactgcagccggtt 9049132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 281
Target Start/End: Complemental strand, 34801555 - 34801511
Alignment:
Q  237 ttcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    |||||| ||||||||||||||||  ||||||||||||||||||||    
T  34801555 ttcctcagcagttaactgccgaggagacaaaaacgtattttactt 34801511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 277
Target Start/End: Complemental strand, 16192842 - 16192747
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtatttt 277  Q
    |||||||||||||   |||| ||||||||  | |||||||||| || || || |||| |||| |||||||||||||||  | ||||||||||||||    
T  16192842 tcggcagttaactgccgaggctttcctcgacacttaactgcagccgatttttaaattactcgacagttaactgccgagggggcaaaaacgtatttt 16192747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 300
Target Start/End: Complemental strand, 29286283 - 29286184
Alignment:
Q  201 gttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagccctatgc 300  Q
    ||||||||||| |||||||||||  |||||  | | ||||||||||||||||| |||||  | ||||||||||  |||||| |||| |||| || |||||    
T  29286283 gttttcctcggcagttaactgcaaccggtttcttatttcctcggcagttaactaccgagggggcaaaaacgtaaattacttgtgtgcctcaaccttatgc 29286184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 260
Target Start/End: Complemental strand, 33052610 - 33052532
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgaga 260  Q
    |||| ||||||||| | ||| |||| |||||||||||||||||| ||||| ||   ||||||| ||||||||||||||||    
T  33052610 ttcgacagttaactgtcgagatttttctcggtagttaactgcagacggtt-ttattttcctcgacagttaactgccgaga 33052532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 6204900 - 6204858
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    ||||||||||||||  |||||||||||||| ||||||||||||    
T  6204900 tcggcagttaactaccgaggttttcctcggcagttaactgcag 6204858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 11691867 - 11691825
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    ||||||||||||||  |||||||||||||| ||||||||||||    
T  11691867 tcggcagttaactaccgaggttttcctcggcagttaactgcag 11691825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 13401528 - 13401482
Alignment:
Q  213 agttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    |||||||||||| || || || |||||||||||||||||||||||||    
T  13401528 agttaactgcagccgattttttaattcctcggcagttaactgccgag 13401482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 18351641 - 18351683
Alignment:
Q  180 cttcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||||  |||||||||||||| ||||||||||    
T  18351641 cttcggcagttaactaccgaggttttcctcggcagttaactgc 18351683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 22305181 - 22305139
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    ||||||||||||||  |||||||||||||| ||||||||||||    
T  22305181 tcggcagttaactaccgaggttttcctcggcagttaactgcag 22305139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 13388708 - 13388785
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    ||||||||||||||  |||||||||||||  |||||||||||| ||  | |  |||| |||||||||||||| |||||    
T  13388708 tcggcagttaactaccgaggttttcctcgacagttaactgcagccgaatttgaaatttctcggcagttaactaccgag 13388785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 18347094 - 18347037
Alignment:
Q  202 ttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    |||||||||| |||||||||||| ||| | |   ||||||||||||||||||||||||    
T  18347094 ttttcctcggcagttaactgcagccggatttcagattcctcggcagttaactgccgag 18347037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 258
Target Start/End: Original strand, 25141098 - 25141155
Alignment:
Q  201 gttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccga 258  Q
    ||||||||||| ||||||||| ||  |||  |||||||||||| ||||||||||||||    
T  25141098 gttttcctcggcagttaactgtagctggtatttgaattcctcgacagttaactgccga 25141155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 259
Target Start/End: Complemental strand, 29065789 - 29065736
Alignment:
Q  206 cctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    |||| |||||||||||||| ||| | |  |||||||||||||||||||||||||    
T  29065789 cctcagtagttaactgcagccggatttctaattcctcggcagttaactgccgag 29065736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 259
Target Start/End: Complemental strand, 29074802 - 29074749
Alignment:
Q  206 cctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    |||| |||||||||||||| ||| | |  |||||||||||||||||||||||||    
T  29074802 cctcagtagttaactgcagccggatttctaattcctcggcagttaactgccgag 29074749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 259
Target Start/End: Complemental strand, 29079566 - 29079513
Alignment:
Q  206 cctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    |||| |||||||||||||| ||| | |  |||||||||||||||||||||||||    
T  29079566 cctcagtagttaactgcagccggatttctaattcctcggcagttaactgccgag 29079513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 259
Target Start/End: Complemental strand, 29107375 - 29107322
Alignment:
Q  206 cctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    |||| |||||||||||||| ||| | |  |||||||||||||||||||||||||    
T  29107375 cctcagtagttaactgcagccggatttctaattcctcggcagttaactgccgag 29107322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 3380843 - 3380803
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    |||| |||||||| | |||||||||||||||||||||||||    
T  3380843 tcggtagttaactgtcgaggttttcctcggtagttaactgc 3380803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 13382702 - 13382662
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  13382702 tcggcagttaactaccgaggttttcctcggcagttaactgc 13382662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 258
Target Start/End: Complemental strand, 18001270 - 18001211
Alignment:
Q  198 gaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccga 258  Q
    ||||||||| |||| |||||||||||| ||||| || ||||||||  ||||||||||||||    
T  18001270 gaggttttcttcggcagttaactgcagccggtt-tttaattcctcaacagttaactgccga 18001211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 24085279 - 24085231
Alignment:
Q  205 tcctcggtagttaactgcagtcggttattgaattcctcggcagttaact 253  Q
    ||||||||||||||||||||||||||    | |||||||||||||||||    
T  24085279 tcctcggtagttaactgcagtcggtttcgtatttcctcggcagttaact 24085231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 26712121 - 26712081
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  26712121 tcggcagttaactaccgaggttttcctcggcagttaactgc 26712081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 28249958 - 28249918
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  28249958 tcggcagttaactaccgaggttttcctcggcagttaactgc 28249918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 184 - 281
Target Start/End: Complemental strand, 48314744 - 48314648
Alignment:
Q  184 ggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||| ||  ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||  | |||||| |||||||||||    
T  48314744 ggcagttaagtaccgaggttttcgtcggtagttaactgcagccggttattgaattcctcggcagttaactgccgag-gggcaaaaatgtattttactt 48314648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 19044366 - 19044249
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  || ||||||||||| | |||||||||||||||| |  |||||||||||| ||||||||||||   ||||||||||||||||||     
T  19044366 tcggcagttaactaccgaagttttcctcggcaattaactgcagtcggtt-tcaaattcctcggcaattaactgccgagtgaacaaaaacgtattttactc 19044268  T
Q  282 atgtgtctcagccctatgc 300  Q
    ||||| ||||||| |||||    
T  19044267 atgtgcctcagccttatgc 19044249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 182 - 300
Target Start/End: Original strand, 20710270 - 20710387
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  || ||||||||||| | |||||||||||||||| |  |||||||||||| ||||||||||||   ||||||||||||||||||     
T  20710270 tcggcagttaactaccgaagttttcctcggcaattaactgcagtcggtt-tcaaattcctcggcaattaactgccgagtgaacaaaaacgtattttactc 20710368  T
Q  282 atgtgtctcagccctatgc 300  Q
    ||||| ||||||| |||||    
T  20710369 atgtgcctcagccttatgc 20710387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 46860585 - 46860467
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||||||   ||||||| ||||  ||||||||||||||||||| || ||||||||| |||||||||||||||  | ||||| |||||||||||    
T  46860585 ttcggcagttaactgccgaggtttgcctcaatagttaactgcagtcggtttttcaattcctcgacagttaactgccgagggggcaaaagcgtattttact 46860486  T
Q  281 tatgtgtctcagccctatg 299  Q
    | |||| ||||||| ||||    
T  46860485 tgtgtgcctcagccttatg 46860467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 47060999 - 47060883
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  |||||||||||||| |||||||| ||| || || |||||||||||| |||||||||||||||  | ||||||||||||||||||    
T  47060999 tcggcagttaactaccgaggttttcctcggcagttaactacagccgatt-ttgaattcctcgacagttaactgccgagggggcaaaaacgtattttactt 47060901  T
Q  282 atgtgtctcagccctatg 299  Q
     | || ||||||| ||||    
T  47060900 gtatgcctcagccttatg 47060883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 37340375 - 37340271
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  |||||||| ||||| |||||||||||  ||||| |||||||||||| |||||||||| |||   ||||||||||||||||| ||    
T  37340375 tcggcagttaactaccgaggtttttctcggcagttaactgcaaccggtttttgaattcctcgacagttaactgtcgaagagacaaaaacgtattttattt 37340276  T
Q  282 atgtg 286  Q
    |||||    
T  37340275 atgtg 37340271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 180 - 300
Target Start/End: Original strand, 46863342 - 46863462
Alignment:
Q  180 cttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttac 279  Q
    ||||||||||||||||  ||| ||||| |  | |||||||||||| ||||| || |||| |||||||||||||||||||   | ||||||||||||||||    
T  46863342 cttcggcagttaactacagagattttcgttcgcagttaactgcagccggtttttcaatttctcggcagttaactgccgatggggcaaaaacgtattttac 46863441  T
Q  280 ttatgtgtctcagccctatgc 300  Q
    || |||||||||||| |||||    
T  46863442 ttgtgtgtctcagccttatgc 46863462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 208 - 291
Target Start/End: Complemental strand, 21185666 - 21185583
Alignment:
Q  208 tcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctca 291  Q
    |||| |||||||| ||| |||||||||||||| |||||||||||||||||||  | ||||| ||||||||||||||||||||||    
T  21185666 tcggcagttaactacagccggttattgaattcttcggcagttaactgccgaggaggcaaaatcgtattttacttatgtgtctca 21185583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 182 - 300
Target Start/End: Original strand, 28980172 - 28980291
Alignment:
Q  182 tcggcagttaactattgaggttttcct-cggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||||||  ||||||||||| ||| |||||||||||  ||| |||||||||| ||||||| ||||||| |||  | |||||||||||||||||    
T  28980172 tcggcagttaactaccgaggttttccttcggcagttaactgcatccggatattgaattcttcggcagctaactgctgagggggcaaaaacgtattttact 28980271  T
Q  281 tatgtgtctcagccctatgc 300  Q
      |||||||||||| |||||    
T  28980272 cgtgtgtctcagccttatgc 28980291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 299
Target Start/End: Original strand, 9494822 - 9494923
Alignment:
Q  198 gaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagcccta 297  Q
    |||||||||||||| |||||||||||| ||||| || |||||||||||||||||||||||||  | || | || |||||||||| |||| ||||||| ||    
T  9494822 gaggttttcctcggcagttaactgcagccggttttttaattcctcggcagttaactgccgagggggcatatacctattttacttgtgtgcctcagcctta 9494921  T
Q  298 tg 299  Q
    ||    
T  9494922 tg 9494923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 300
Target Start/End: Original strand, 41049196 - 41049306
Alignment:
Q  189 ttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtc 288  Q
    |||||||  |||||||||||||| |||||||||||| || ||||||||||| ||| ||||||||| |||| |  |||||| |||||||||||||||||      
T  41049196 ttaactaccgaggttttcctcggcagttaactgcagccgattattgaattcttcgacagttaactaccga-agaacaaaagcgtattttacttatgtgca 41049294  T
Q  289 tcagccctatgc 300  Q
    |||||| |||||    
T  41049295 tcagccttatgc 41049306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 182 - 280
Target Start/End: Original strand, 30355239 - 30355337
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||||||  |||||||||||||| |||||||||||| || || |||||||| || ||| ||||||||||||  | ||||| |||||||||||    
T  30355239 tcggcagttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcttcagcaattaactgccgagggggcaaaagcgtattttact 30355337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 185 - 299
Target Start/End: Complemental strand, 36392195 - 36392081
Alignment:
Q  185 gcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatg 284  Q
    |||||||||| |||||||||||||||| ||||||| |||  || || |||||||||||  |||||||||| ||||  | |||||||||||||||||| ||    
T  36392195 gcagttaacttttgaggttttcctcggcagttaaccgcaaccgatttttgaattcctcaacagttaactgtcgagggggcaaaaacgtattttacttgtg 36392096  T
Q  285 tgtctcagccctatg 299  Q
    || || |||| ||||    
T  36392095 tgcctaagccttatg 36392081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 294
Target Start/End: Complemental strand, 42682067 - 42681955
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||| ||  |||||||||||||| ||||||||||||  |||| ||||||| |||  | ||||||| |||||  |||||||| | |||||||||    
T  42682067 tcggcagttaattaccgaggttttcctcggcagttaactgcagctggtttttgaatttctcaaccgttaactaccgaggagacaaaaatgcattttactt 42681968  T
Q  282 atgtgtctcagcc 294  Q
    ||||| |||||||    
T  42681967 atgtgcctcagcc 42681955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 203 - 294
Target Start/End: Original strand, 27453615 - 27453706
Alignment:
Q  203 tttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagcc 294  Q
    ||||||||| |||||||||||| ||| | || |||||||||||||||||||||||||  | ||||  |||||||||||||||| ||| ||||    
T  27453615 tttcctcggcagttaactgcagccggatttttaattcctcggcagttaactgccgagggggcaaagtcgtattttacttatgtttctaagcc 27453706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 254
Target Start/End: Complemental strand, 42499482 - 42499410
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactg 254  Q
    ||||||||||||||  |||||||||||||| |||||||||||||||| | |  |||||||||||| |||||||    
T  42499482 tcggcagttaactaccgaggttttcctcggcagttaactgcagtcggatttcaaattcctcggcaattaactg 42499410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 294
Target Start/End: Complemental strand, 47776405 - 47776293
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||| ||  |||||||||||||| |||||||||||| | | | || |||| ||||||||||||||| ||||  | ||||| |||||||||||     
T  47776405 tcggcagttaattaccgaggttttcctcggcagttaactgcagccagatttttaatttctcggcagttaactgtcgagggggcaaaatcgtattttactc 47776306  T
Q  282 atgtgtctcagcc 294  Q
     ||| ||||||||    
T  47776305 gtgtttctcagcc 47776293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 10225842 - 10225960
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||| ||||||||   ||| ||||||||||||||||||| |||||  || ||| |||| ||| |||||||||| ||||  | ||||||| |||||||||    
T  10225842 ttcggtagttaactgccgagattttcctcggtagttaacttcagtcaatttttgcattcatcgacagttaactgtcgaggaggcaaaaacatattttact 10225941  T
Q  281 tatgtgtctcagccctatg 299  Q
    ||||||  |||||| ||||    
T  10225942 tatgtgcttcagccttatg 10225960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 21188423 - 21188472
Alignment:
Q  205 tcctcggtagttaactgcagtcggttattgaattcctcggcagttaactg 254  Q
    ||||||| |||||||||||| ||||| |||||||||||||||||||||||    
T  21188423 tcctcggcagttaactgcagccggtttttgaattcctcggcagttaactg 21188472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 260
Target Start/End: Original strand, 40166781 - 40166838
Alignment:
Q  203 tttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgaga 260  Q
    ||||| ||| ||||||||||||||||||  ||||||||||| ||||||||||||||||    
T  40166781 tttccgcggcagttaactgcagtcggtttctgaattcctcgacagttaactgccgaga 40166838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 48316296 - 48316377
Alignment:
Q  218 actgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagccctatg 299  Q
    ||||||| ||||||||||| || |||||||||||||| | ||  | ||||||| |||||||||| |||||||||||| ||||    
T  48316296 actgcagccggttattgaagtcttcggcagttaactgtcaagggggcaaaaacttattttacttgtgtgtctcagccttatg 48316377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 7975438 - 7975503
Alignment:
Q  7 gtttggaggtggattttgttgctcttcttctgttacttcttgcaaagtgtagcacagtgtttgatttg 74  Q
    ||||||| |||||||||||||||||| ||||||||| |||||||||  ||||  ||||||||||||||    
T  7975438 gtttggatgtggattttgttgctcttattctgttacctcttgcaaaacgtag--cagtgtttgatttg 7975503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 17838723 - 17838647
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccga 258  Q
    ||||||||||||||| ||||||||||||||||||| ||||||| ||| | |  ||  | ||||||||||||||||||    
T  17838723 tcggcagttaactatcgaggttttcctcggtagtttactgcagccggatttctaaaacttcggcagttaactgccga 17838647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 17840890 - 17840966
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccga 258  Q
    ||||||||||||||  |||||||||||||| |||||||||||||||| | |  ||  | ||||||||||||||||||    
T  17840890 tcggcagttaactaccgaggttttcctcggcagttaactgcagtcggatttctaaaacttcggcagttaactgccga 17840966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 300
Target Start/End: Complemental strand, 34622566 - 34622454
Alignment:
Q  188 gttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgt 287  Q
    ||||||||  |||| ||||||||  ||||||||||||||||||  | |||||||| ||||||||||| | ||  | ||||||||||  |||||| ||||     
T  34622566 gttaactaccgaggatttcctcgacagttaactgcagtcggtttcttaattcctctgcagttaactgtcaagggggcaaaaacgtaaattacttgtgtgc 34622467  T
Q  288 ctcagccctatgc 300  Q
    ||||||| |||||    
T  34622466 ctcagccttatgc 34622454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 41047850 - 41047747
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  || ||||||||||| |||||||| ||  || ||||| ||||| || |||||||||| |||||| | |||||| |||||||| ||    
T  41047850 tcggcagttaactaccgaagttttcctcggcagttaactacacccgattattaaattcttctgcagttaactaccgagaag-caaaaatgtattttattt 41047752  T
Q  282 atgtg 286  Q
    |||||    
T  41047751 atgtg 41047747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 226 - 294
Target Start/End: Complemental strand, 48269709 - 48269642
Alignment:
Q  226 cggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagcc 294  Q
    |||||||||||||| |||||||||||||||||||| |  |||||| |||||||||| |||| |||||||    
T  48269709 cggttattgaattcttcggcagttaactgccgaga-gggaaaaacatattttacttgtgtgcctcagcc 48269642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 20353930 - 20353973
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagt 225  Q
    |||||||||||||| |||||||||||||| ||||||||||||||    
T  20353930 tcggcagttaactactgaggttttcctcgatagttaactgcagt 20353973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 280
Target Start/End: Original strand, 36186492 - 36186570
Alignment:
Q  201 gttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||| |||||||||||  ||||| | ||||||||||||| ||||||||||||  | ||||| |||||||||||    
T  36186492 gttttcctcggcagttaactgcaaccggtt-tcgaattcctcggcatttaactgccgagggggcaaaagcgtattttact 36186570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 42025089 - 42025156
Alignment:
Q  186 cagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaact 253  Q
    ||||||||||  || ||||| ||| ||||||||||||| ||||||  |||||||||||||||||||||    
T  42025089 cagttaactaccgaagtttttctctgtagttaactgcaatcggtttatgaattcctcggcagttaact 42025156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 40587734 - 40587688
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcgg 228  Q
    |||||||||||||| ||||||||||||||  ||||||||||||||||    
T  40587734 tcggcagttaactactgaggttttcctcgacagttaactgcagtcgg 40587688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 618745 - 618802
Alignment:
Q  202 ttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    |||||||||| |||||||||||| ||| | |  |||||||||||||||||||||||||    
T  618745 ttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgag 618802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 10705321 - 10705204
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    |||||||||||||    ||||||| ||||| |||||||||||| || || || |||| ||||||||||||||||| ||  |  ||||| |||||||||||    
T  10705321 tcggcagttaactcccaaggtttttctcggcagttaactgcagccgattttttaatttctcggcagttaactgccaaggggggaaaaatgtattttactt 10705222  T
Q  282 atgtgtctcagccctatg 299  Q
     |||| || |||| ||||    
T  10705221 gtgtgccttagccttatg 10705204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 36394938 - 36395011
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    |||| |||||||||  |||||||||||||| | |||| |||||||||||  ||||||| |||||| ||||||||    
T  36394938 tcggtagttaactaccgaggttttcctcggcacttaattgcagtcggtttgtgaattcttcggcaattaactgc 36395011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 280
Target Start/End: Complemental strand, 39460605 - 39460528
Alignment:
Q  203 tttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||| | |||||||||||| ||| | || |||||||||||| | ||||||||||| || |||| |||||||||||    
T  39460605 tttcctcagcagttaactgcagccggatttttaattcctcggcaatcaactgccgagaggataaaatcgtattttact 39460528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 30791008 - 30791048
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||||||||||||||    
T  30791008 tcggcagttaactaccgaggttttcctcggtagttaactgc 30791048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 300
Target Start/End: Original strand, 34623386 - 34623498
Alignment:
Q  188 gttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgt 287  Q
    ||||||||  |||| ||||||||| |||||||||||| || |   | ||||||||||||||||||||||||   | ||||||||||  |||||  |||||    
T  34623386 gttaactaccgaggatttcctcggcagttaactgcagccgatctcttaattcctcggcagttaactgccgatgaggcaaaaacgtaaattactcgtgtgt 34623485  T
Q  288 ctcagccctatgc 300  Q
    |||| || |||||    
T  34623486 ctcaaccttatgc 34623498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 300
Target Start/End: Original strand, 42684221 - 42684281
Alignment:
Q  240 ctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagccctatgc 300  Q
    |||| ||||||||||||||    ||||||||||||||||||| |||||||||||| |||||    
T  42684221 ctcgacagttaactgccgatggaacaaaaacgtattttacttgtgtgtctcagccttatgc 42684281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 294
Target Start/End: Complemental strand, 45361702 - 45361610
Alignment:
Q  202 ttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctcagcc 294  Q
    |||| ||||| |||||||||||| ||| | || ||||||||| |||||||||||||||    ||||||| ||||||||| |||| ||| ||||    
T  45361702 tttttctcggcagttaactgcagccggatttttaattcctcgtcagttaactgccgagggagcaaaaacatattttactcatgtttcttagcc 45361610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 9367724 - 9367766
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcag 224  Q
    ||||||||||||||  |||||||||||||| ||||||||||||    
T  9367724 tcggcagttaactaccgaggttttcctcggcagttaactgcag 9367766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 28112852 - 28112806
Alignment:
Q  245 cagttaactgccgagatgacaaaaacgtattttacttatgtgtctca 291  Q
    |||||||||||||||| | ||||| |||||||||||| |||||||||    
T  28112852 cagttaactgccgagagggcaaaagcgtattttacttgtgtgtctca 28112806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 259
Target Start/End: Original strand, 34742411 - 34742472
Alignment:
Q  198 gaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    |||||||||||||| |||||||||||||| | | |  ||||||||| || ||||||||||||    
T  34742411 gaggttttcctcggcagttaactgcagtcagatttctaattcctcgacaattaactgccgag 34742472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 35606862 - 35606817
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcg 227  Q
    ||||||||||||||  |||||||||||||| |||||||||| ||||    
T  35606862 tcggcagttaactaccgaggttttcctcggcagttaactgccgtcg 35606817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 40142661 - 40142734
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    ||||||||||| ||  || |||||| ||||||||||||||||  |||||  ||||||||||| || ||||||||    
T  40142661 tcggcagttaattacagaagttttcttcggtagttaactgcaaccggtttatgaattcctcgacaattaactgc 40142734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 15070428 - 15070388
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  15070428 tcggcagttaactaccgaggttttcctcggcagttaactgc 15070388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 18105446 - 18105406
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  18105446 tcggcagttaactaccgaggttttcctcggcagttaactgc 18105406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 22640683 - 22640738
Alignment:
Q  198 gaggttttcctcggtagttaactgcagtcggttattgaa-ttcctcggcagttaact 253  Q
    |||||||| ||||||||||||||||||| |||| ||||| ||||||| |||||||||    
T  22640683 gaggtttttctcggtagttaactgcagttggtt-ttgaacttcctcgacagttaact 22640738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 256
Target Start/End: Complemental strand, 29592618 - 29592542
Alignment:
Q  180 cttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgcc 256  Q
    ||||| ||||||||||  || |||||| |||| |||||| ||||||||| | |  ||||||||| ||||||||||||    
T  29592618 cttcgacagttaactaccgaagttttcatcggcagttaattgcagtcggatttcaaattcctcgacagttaactgcc 29592542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 230
Target Start/End: Original strand, 31324822 - 31324854
Alignment:
Q  198 gaggttttcctcggtagttaactgcagtcggtt 230  Q
    ||||||||||||||||||||||| |||||||||    
T  31324822 gaggttttcctcggtagttaactacagtcggtt 31324854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 36781449 - 36781493
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtc 226  Q
    |||||||||||||   |||||||||||||| ||||||||||||||    
T  36781449 tcggcagttaactgccgaggttttcctcgggagttaactgcagtc 36781493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 45763458 - 45763414
Alignment:
Q  177 ttccttcggcagttaactattgaggttttcctcggtagttaactg 221  Q
    |||| |||||||||||||| |||||  ||||||||||||||||||    
T  45763458 ttccctcggcagttaactactgaggaattcctcggtagttaactg 45763414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 45767861 - 45767901
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  45767861 tcggcagttaactaccgaggttttcctcggcagttaactgc 45767901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 3951 - 3850
Alignment:
Q  189 ttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtc 288  Q
    |||||||  |||||||||||||| |||||||||||| || || |||||||||||| |||||||||||||||  ||||||||  |||||||||| |||| |    
T  3951 ttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcctcgacagttaactgccgaggggacaaaaa-atattttacttgtgtgcc 3853  T
Q  289 tca 291  Q
    |||    
T  3852 tca 3850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 280
Target Start/End: Original strand, 17351 - 17449
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||||||  |||| ||||||||| |||||||||||| ||| | |  |||||||||||||||||||||||||  |  |||| |||||||||||    
T  17351 tcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggtaaaatcgtattttact 17449  T

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Target: scaffold0341; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 259
Target Start/End: Original strand, 18055 - 18134
Alignment:
Q  180 cttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaa-ttcctcggcagttaactgccgag 259  Q
    ||||||||||||||| | ||||||||| ||||||||||||||||| ||||| |||||    ||||||||||||||||||||    
T  18055 cttcggcagttaactgtcgaggttttcttcggtagttaactgcagccggtt-ttgaaccgtctcggcagttaactgccgag 18134  T

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Target: scaffold0340 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 300
Target Start/End: Original strand, 1181 - 1298
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    |||||||||||||   |||||||||||||| |||||| ||| | ||||| |  |||||||||||||||||||||||||  ||||||||||||  |||||     
T  1181 tcggcagttaacttccgaggttttcctcggcagttaattgctgccggtt-tcaaattcctcggcagttaactgccgaggggacaaaaacgtaaattactc 1279  T
Q  282 atgtgtctcagccctatgc 300  Q
     |||| ||||||| |||||    
T  1280 gtgtgcctcagccttatgc 1298  T

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Target: scaffold1500 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 759 - 832
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    ||||||||||||||  || |||||||| |||||||||| |||| |||||  |||||||||||||||||||||||    
T  759 tcggcagttaactaccgaagttttcctaggtagttaacagcagccggtttatgaattcctcggcagttaactgc 832  T

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Target: scaffold0794 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 5344 - 5268
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    ||||||||||||||  ||||||||||||||||||||||||||| ||||| |  ||||| ||||||||||| |||||||    
T  5344 tcggcagttaactaccgaggttttcctcggtagttaactgcagccggtt-tcaaattcttcggcagttaattgccgag 5268  T

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Target: scaffold0012 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 203 - 280
Target Start/End: Complemental strand, 232600 - 232523
Alignment:
Q  203 tttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||| |||||||||||||||| | || ||||||||| |||||||||||||||  || |||| |||||||||||    
T  232600 tttcctcggcagttaactgcagtcggatttttaattcctcgacagttaactgccgaggggataaaatcgtattttact 232523  T

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Target: scaffold0361 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 4400 - 4477
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    ||||||||||||||  |||| ||||||||||| |||||||||| |||   |  |||||||||||||||||||||||||    
T  4400 tcggcagttaactaccgaggatttcctcggtatttaactgcagccggagttcaaattcctcggcagttaactgccgag 4477  T

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Target: scaffold0360 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 7304 - 7413
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttactt 281  Q
    ||||||||||||||  |||||||| ||||| |||| | ||||| ||||| ||||||||||| ||| ||||||| | ||  | ||||||| |||||||||     
T  7304 tcggcagttaactaccgaggtttttctcggcagttgattgcagccggtttttgaattcctcagcaattaactgtcaaggaggcaaaaacatattttactc 7403  T
Q  282 atgtgtctca 291  Q
    ||||| ||||    
T  7404 atgtgcctca 7413  T

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Target: scaffold0116 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 15955 - 16032
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    |||| |||||||||  |||||||||||||| ||||||||||||  || | |  |||||||||||||||||||||||||    
T  15955 tcggaagttaactaccgaggttttcctcggcagttaactgcagctggatttcaaattcctcggcagttaactgccgag 16032  T

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Target: scaffold0116; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 280
Target Start/End: Complemental strand, 11353 - 11276
Alignment:
Q  203 tttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||| |||||||||||| |||   |  |||||||||||||||||||||||||  |  |||| |||||||||||    
T  11353 tttcctcggaagttaactgcagccggaattcaaattcctcggcagttaactgccgagggggtaaaatcgtattttact 11276  T

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Target: scaffold0494 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 280
Target Start/End: Complemental strand, 904 - 806
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    ||||||||||||||  |||||||||||||| |||||||| ||| ||  | |  ||||||| |||||||||||||||||  |  |||| |||||||||||    
T  904 tcggcagttaactaccgaggttttcctcggcagttaactacagccgaatttcaaattcctaggcagttaactgccgagggggtaaaatcgtattttact 806  T

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Target: scaffold0494; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 5404 - 5364
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  5404 tcggcagttaactaccgaggttttcctcggcagttaactgc 5364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 247
Target Start/End: Original strand, 1676 - 1722
Alignment:
Q  201 gttttcctcggtagttaactgcagtcggttattgaattcctcggcag 247  Q
    ||||||||| | |||||||||||||||||| ||||||||||||||||    
T  1676 gttttcctcagcagttaactgcagtcggtttttgaattcctcggcag 1722  T

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Target: scaffold0219 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 20112 - 20185
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgc 255  Q
    |||||||| |||||  |||| ||||||||  ||||||||| || || || ||||||||||||||||||||||||    
T  20112 tcggcagtaaactaccgaggatttcctcgacagttaactgtagccgatttttgaattcctcggcagttaactgc 20185  T

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Target: scaffold0219; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 15754 - 15704
Alignment:
Q  204 ttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactg 254  Q
    |||||||| |||||||||||  ||||| |||||||||||| ||||||||||    
T  15754 ttcctcggcagttaactgcaaccggtttttgaattcctcgacagttaactg 15704  T

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Target: scaffold0201 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 22476 - 22399
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    ||||||||||||||  ||| |||||||| | |||||||||||| ||  | |  |||||||||||||||||||||||||    
T  22476 tcggcagttaactaccgagattttcctcagcagttaactgcagccgaatttcaaattcctcggcagttaactgccgag 22399  T

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Target: scaffold1379 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 280
Target Start/End: Original strand, 450 - 532
Alignment:
Q  198 gaggttttcctcggtagttaactgcagtcgg-ttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttact 280  Q
    |||||||||||||  |||||||||||| ||| ||||| ||||| |||||||||||||||||||    ||||| |||||||||||    
T  450 gaggttttcctcgacagttaactgcagccggattatt-aattcttcggcagttaactgccgagggagcaaaatcgtattttact 532  T

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Target: scaffold0388 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 291
Target Start/End: Original strand, 11741 - 11819
Alignment:
Q  213 agttaactgcagtcggttattgaattcctcggcagttaactgccgagatgacaaaaacgtattttacttatgtgtctca 291  Q
    |||||||||||| ||||| |||||||| || |||||||||||||||   | |||||  ||||||||||| ||| |||||    
T  11741 agttaactgcagccggtttttgaattcttcagcagttaactgccgaaggggcaaaagtgtattttacttgtgtatctca 11819  T

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Target: scaffold0260 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 11833 - 11775
Alignment:
Q  202 ttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgaga 260  Q
    |||||||||| |||||||||||| ||| | |  |||||||||| |||||||||||||||    
T  11833 ttttcctcggcagttaactgcagccggatttcaaattcctcggtagttaactgccgaga 11775  T

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Target: scaffold0057 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 23226 - 23296
Alignment:
Q  181 ttcggcagttaactattgaggttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaa 251  Q
    |||||||||||| |||  |  ||||||||||||||||||||||| || || || ||||||||| |||||||    
T  23226 ttcggcagttaattatcaatattttcctcggtagttaactgcagccgatttttaaattcctcgacagttaa 23296  T

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Target: scaffold0744 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 423 - 463
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  423 tcggcagttaactaccgaggttttcctcggcagttaactgc 463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 7491 - 7451
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||||||| ||||||    
T  7491 tcggcagttaactaccgaggttttcctcggtagtcaactgc 7451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 230
Target Start/End: Original strand, 12960 - 12992
Alignment:
Q  198 gaggttttcctcggtagttaactgcagtcggtt 230  Q
    ||||||||||||||||||||||||||| |||||    
T  12960 gaggttttcctcggtagttaactgcagccggtt 12992  T

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Target: scaffold0092 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 54638 - 54590
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgcagtcggtt 230  Q
    ||||||||||||| | || ||||||||||| |||||||||||| |||||    
T  54638 tcggcagttaactgtcgatgttttcctcggcagttaactgcagccggtt 54590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 50120 - 50080
Alignment:
Q  182 tcggcagttaactattgaggttttcctcggtagttaactgc 222  Q
    ||||||||||||||  |||||||||||||| ||||||||||    
T  50120 tcggcagttaactaccgaggttttcctcggcagttaactgc 50080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 134333 - 134388
Alignment:
Q  201 gttttcctcggtagttaactgcagtcggttattgaattcctcggcagttaactgccgag 259  Q
    |||||||||||||||||||||||| ||||| |  |||   |||||||||||||||||||    
T  134333 gttttcctcggtagttaactgcagccggttctataat---tcggcagttaactgccgag 134388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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