View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10208_low_8 (Length: 307)
Name: NF10208_low_8
Description: NF10208
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10208_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 18 - 295
Target Start/End: Original strand, 50326916 - 50327195
Alignment:
| Q |
18 |
ttgtgaaaccttaatgtgcaataaatttttctaatagttttaacgttgttgctcaagaataattagtcgtgggttagatgtgtttattccatagttttta |
117 |
Q |
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| T |
50326916 |
ttgtgaaaccttaatgtgcaataaatttttctaatagttttaacgttgttactcaagaataattagtcgtgggttagatgtgtttatacaatagttttta |
50327015 |
T |
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| Q |
118 |
ttctgtttgaattatcatgatatttactaagttttcacagcgagtattttttaacgagtataaaaagcccaaggaaaagaaaagactgcaaagctaaatg |
217 |
Q |
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| T |
50327016 |
ttctgtttgaattatcatgatatttacaaagttttcacagcgagtattttttaac-agtataaaaagcccaaggaaaagaaaagactgcaaagctaaatg |
50327114 |
T |
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| Q |
218 |
aacacttcaatgtatgcaagtactagatatgtcatcaaagatgata--ctctcgtttcaaaacaacggag-attttgttca |
295 |
Q |
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||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |
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| T |
50327115 |
aacacttgattgtatgcaagtactagatatgtcatcaaagatgatactctctcgtttcaaaacaacggagcattttgttca |
50327195 |
T |
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