View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10209_low_2 (Length: 520)
Name: NF10209_low_2
Description: NF10209
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10209_low_2 |
 |  |
|
| [»] scaffold0095 (1 HSPs) |
 |  |  |
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Alignment Details
Target: chr3 (Bit Score: 433; Significance: 0; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 433; E-Value: 0
Query Start/End: Original strand, 1 - 504
Target Start/End: Original strand, 45675659 - 45676163
Alignment:
| Q |
1 |
aagtagatttggtgtatctttggtttcctgtttgcaacacacaatagcacgtttgtacatttttcgatgtgttttgtcgtaattttcagaagcttcaaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||| ||||||||||| ||| |||||| |||||||| |
|
|
| T |
45675659 |
aagtagatttggtgtatctttggtttcccgtttgcaacacacaataacacgtttgtacacttttcgatttgttttgtcgtgattctcagaaacttcaaat |
45675758 |
T |
 |
| Q |
101 |
actaacttctacgctaacgtggttttttacggtgatttctatcaaattccgtttttcaaaagcaataccaaacagacacttggttttatttgtagaagag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45675759 |
actaacttctacgctaacgtggttttttaccgtgatttctatcaaactccgtttttcaaaagcaataccaaacagacacttggttttatttgtagaagag |
45675858 |
T |
 |
| Q |
201 |
cactgctatatgcagcgaacgtttttcatcccgaattgtcccgagatacaaatgtcaaaactatataggctggtcaaaattgaaagaagtttctt-agcg |
299 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
45675859 |
cactgctatatgcagcgaacgtttttaatcccgaattgtcccgagatacaaatgtcaaaattatataggctggtcaaacttgaaagaagtttcttaagcg |
45675958 |
T |
 |
| Q |
300 |
gaaatcaggggtgcacgtgcttatcataaccaatggttgtctgtcgctatgcttcacgaaactgtttctcgggataaacaacattttcctttgtataatt |
399 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
45675959 |
gaaatcagggatgcacgtgcttatcataaccaatggttgtctgtcgctatgcttcacgaagttgtttctcgggataaacaacattttcctttgtagaatt |
45676058 |
T |
 |
| Q |
400 |
gagtttgcgtgaagttaaatgaatgtttgggtttatttctagaaggacaaaaattgaaaatagattttggcaatgtcttagttagtcttcctcgtatgat |
499 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45676059 |
gagtttgcgtgaagttaaatgaatgtttgggtttatttctagaaggacaaaaattgaaaatagattttggcaatgtcttagttagtcttcctcgtatgat |
45676158 |
T |
 |
| Q |
500 |
tctag |
504 |
Q |
| |
|
||||| |
|
|
| T |
45676159 |
tctag |
45676163 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 194 - 391
Target Start/End: Original strand, 40714514 - 40714711
Alignment:
| Q |
194 |
agaagagcactgctatatgcagcgaacgtttttcatcccgaattgtcccgagatacaaatgtcaaaactatataggctggtcaaaattgaaagaagtttc |
293 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||||||||||||||| | |||||||||| |||| | | |||||| |||| |||||||||| | |||| |
|
|
| T |
40714514 |
agaagagcaccgctatatgcagcgaatgtttttcatcccgaattattccgagatacaggtgtccatcttttataggttggttaaaattgaaaacaatttc |
40714613 |
T |
 |
| Q |
294 |
ttagcggaaatcaggggtgcacgtgcttatcataaccaatggttgtctgtcgctatgcttcacgaaactgtttctcgggataaacaacattttccttt |
391 |
Q |
| |
|
||||||||| ||||||||| ||||||||| | |||||||||| || | ||||||||||||||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
40714614 |
ttagcggaattcaggggtgtgcgtgcttataacaaccaatggtagtttctcgctatgcttcacgaagctgtttctcgggataaacaacatttttcttt |
40714711 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 48847599 - 48847763
Alignment:
| Q |
19 |
tttggtttcctgtttgcaacacacaatagcacgtttgtacatttttcgatgtgtttt-gtcgtaattttcagaagcttcaaatactaacttctacgctaa |
117 |
Q |
| |
|
|||||||| | |||||||||| |||| |||| ||||| || |||| ||||| |||| | ||| ||||||| |||||||||||||||||||| |||||| |
|
|
| T |
48847599 |
tttggttttccgtttgcaacatacaaaagcatgtttgcacgttttccgatgcatttttgccgtgattttcacaagcttcaaatactaacttcctcgctaa |
48847698 |
T |
 |
| Q |
118 |
cgtggttttttacggtgatttcta-tcaaattccgtttttcaaaagcaataccaaacagacactt |
181 |
Q |
| |
|
||||||||||| | |||||||| | ||||| || |||||||||| || |||||||||||||||| |
|
|
| T |
48847699 |
cgtggttttttgccgtgatttccattcaaactctgtttttcaaacgctgtaccaaacagacactt |
48847763 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 622140 - 622020
Alignment:
| Q |
19 |
tttggtttcctgtttgcaacacacaatagcacgtttgtacatttttcgatgtgtttt-gtcgtaattttcagaagcttcaaatactaacttctacgctaa |
117 |
Q |
| |
|
||||||||||||||||||||| |||| ||||| |||| | || ||||||| ||||| | ||| ||||| | ||||| ||||||||| |||||||| ||| |
|
|
| T |
622140 |
tttggtttcctgtttgcaacatacaaaagcacatttgcatgttattcgatgcgtttttgccgtgatttttaaaagctccaaatactagcttctacgttaa |
622041 |
T |
 |
| Q |
118 |
cgtggttttttacggtgattt |
138 |
Q |
| |
|
||||||||||| | ||||||| |
|
|
| T |
622040 |
cgtggttttttgctgtgattt |
622020 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 173
Target Start/End: Complemental strand, 16118573 - 16118490
Alignment:
| Q |
90 |
aagcttcaaatactaacttctacgctaacgtggttttttacggtgatttctatcaaattccgtttttcaaaagcaataccaaac |
173 |
Q |
| |
|
||||| ||||||||| ||||||||||||||||||||||| |||||||| ||||||||| |||| |||| || ||||||||| |
|
|
| T |
16118573 |
aagctccaaatactagcttctacgctaacgtggttttttgtcgtgatttccatcaaattctattttgcaaacgctataccaaac |
16118490 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 128
Target Start/End: Original strand, 19322413 - 19322445
Alignment:
| Q |
96 |
caaatactaacttctacgctaacgtggtttttt |
128 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| |
|
|
| T |
19322413 |
caaatactaacttcttcgctaacgtggtttttt |
19322445 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 59; Significance: 9e-25; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 12 - 181
Target Start/End: Original strand, 41921941 - 41922111
Alignment:
| Q |
12 |
gtgtatctttggtttcctgtttgcaacacacaatagcacgtttgtacatttttcgatgtgtttt-gtcgtaattttcagaagcttcaaatactaacttct |
110 |
Q |
| |
|
|||||| |||| |||||| |||||||||||||| | |||||||| ||| ||| | ||| |||| | ||| ||| ||| ||||| ||||||||| ||||| |
|
|
| T |
41921941 |
gtgtatgtttgatttcctctttgcaacacacaaaaacacgtttgcacactttccaatgcatttttgccgtgattctcataagctccaaatactagcttct |
41922040 |
T |
 |
| Q |
111 |
acgctaacgtggttttttacggtgatttctatcaaattccgtttttcaaaagcaataccaaacagacactt |
181 |
Q |
| |
|
| | |||||||||||||| | ||||||||||||||| ||||||||||||| ||||| |||||| |||||| |
|
|
| T |
41922041 |
aggttaacgtggttttttgccgtgatttctatcaaactccgtttttcaaacgcaatgtcaaacaaacactt |
41922111 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 82 - 162
Target Start/End: Original strand, 49378850 - 49378930
Alignment:
| Q |
82 |
attttcagaagcttcaaatactaacttctacgctaacgtggttttttacggtgatttctatcaaattccgtttttcaaaag |
162 |
Q |
| |
|
||||||||||||| ||||| || ||||| ||| ||||||||||||||| ||||||| ||||||| |||||||| |||||| |
|
|
| T |
49378850 |
attttcagaagctctaaatattagcttcttcgccaacgtggttttttaccgtgatttttatcaaactccgttttgcaaaag |
49378930 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 49; Significance: 8e-19; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 19 - 146
Target Start/End: Complemental strand, 43292875 - 43292747
Alignment:
| Q |
19 |
tttggtttcctgtttgcaacacacaatagcacgtttgtacatttttcgatgtgttttgtc-gtaattttcagaagcttcaaatactaacttctacgctaa |
117 |
Q |
| |
|
|||||||||||||||||| ||||||| |||||||||| | |||| | | |||||| | || ||||||||||||| ||||||||||||| |||| ||| |
|
|
| T |
43292875 |
tttggtttcctgtttgcaccacacaaaagcacgtttgcatgttttcgggtatgtttttaccgtgattttcagaagctccaaatactaacttttacgttaa |
43292776 |
T |
 |
| Q |
118 |
cgtggttttttacggtgatttctatcaaa |
146 |
Q |
| |
|
| ||||||||||| |||||||| |||||| |
|
|
| T |
43292775 |
catggttttttaccgtgatttccatcaaa |
43292747 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 9607567 - 9607677
Alignment:
| Q |
19 |
tttggtttcctgtttgcaacacacaatagcacgtttgtacatttttcgatgtgtttt-gtcgtaattttcagaagcttcaaatactaacttctacgctaa |
117 |
Q |
| |
|
|||||||||| |||||| |||||||| |||||||||| | ||| || | ||||||| | ||||||||| ||||||| |||||||||||||| ||||| |
|
|
| T |
9607567 |
tttggtttcccgtttgcgacacacaaaagcacgtttgcatgtttctcaacgtgtttttgccgtaatttttagaagctctaaatactaacttctttgctaa |
9607666 |
T |
 |
| Q |
118 |
cgtggtttttt |
128 |
Q |
| |
|
||||||||||| |
|
|
| T |
9607667 |
cgtggtttttt |
9607677 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 31133661 - 31133541
Alignment:
| Q |
19 |
tttggtttcctgtttgcaacacacaatagcacgtttgtacatttttcgatgtgtttt-gtcgtaattttcagaagcttcaaatactaacttctacgctaa |
117 |
Q |
| |
|
|||| |||||||||||||| | | || | || ||||||| |||||||||| | |||| | ||| ||||| ||||| ||||| |||||| ||||||||||| |
|
|
| T |
31133661 |
tttgatttcctgtttgcaatataaaaaaacatgtttgtatatttttcgatttatttttgccgttatttttagaagtttcaagtactaatttctacgctaa |
31133562 |
T |
 |
| Q |
118 |
cgtggttttttacggtgattt |
138 |
Q |
| |
|
|||| |||||||| ||||||| |
|
|
| T |
31133561 |
cgtgtttttttaccgtgattt |
31133541 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 72 - 155
Target Start/End: Complemental strand, 2990658 - 2990575
Alignment:
| Q |
72 |
ttttgtcgtaattttcagaagcttcaaatactaacttctacgctaacgtggttttttacggtgatttctatcaaattccgtttt |
155 |
Q |
| |
|
||||||||| ||||||||||||| ||||||||||||||| | ||| ||||||||||| ||||||| |||||| ||||||| |
|
|
| T |
2990658 |
ttttgtcgtgattttcagaagctacaaatactaacttctttgttaatgtggttttttatcgtgattttcatcaaacaccgtttt |
2990575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 35998191 - 35998117
Alignment:
| Q |
72 |
ttttgtcgtaattttcagaagcttcaaatactaacttctacgctaacgtggttttttacggtgatttctatcaaa |
146 |
Q |
| |
|
||||||||| ||||| ||||||| ||||||||||||||| ||||||||| |||||| |||||||| |||||| |
|
|
| T |
35998191 |
ttttgtcgtgatttttagaagctccaaatactaacttcttcgctaacgtaattttttgtcgtgatttccatcaaa |
35998117 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 82 - 146
Target Start/End: Original strand, 8876291 - 8876355
Alignment:
| Q |
82 |
attttcagaagcttcaaatactaacttctacgctaacgtggttttttacggtgatttctatcaaa |
146 |
Q |
| |
|
|||||||||| ||| |||||||||||| ||||||||||||||| |||| ||||| || |||||| |
|
|
| T |
8876291 |
attttcagaaactttaaatactaacttttacgctaacgtggttgtttatcgtgatatccatcaaa |
8876355 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 88 - 126
Target Start/End: Original strand, 47852369 - 47852407
Alignment:
| Q |
88 |
agaagcttcaaatactaacttctacgctaacgtggtttt |
126 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
47852369 |
agaagcttcaaatactaacttctaaactaacgtggtttt |
47852407 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 44; Significance: 8e-16; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 12 - 174
Target Start/End: Complemental strand, 41146294 - 41146131
Alignment:
| Q |
12 |
gtgtatctttggtttcctgtttgcaacacacaatagcacgtttgtacatttttcgatgtgtttt-gtcgtaattttcagaagcttcaaatactaacttct |
110 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||| |||| ||| || ||| |||| |||| | ||| ||| ||| ||||| ||||||||| |||| |
|
|
| T |
41146294 |
gtgtatgtttggtttcccgtttgcaacacacaaaagcatacttgcacgctttccgatacatttttgccgtgattctcataagctccaaatactagtttct |
41146195 |
T |
 |
| Q |
111 |
acgctaacgtggttttttacggtgatttctatcaaattccgtttttcaaaagcaataccaaaca |
174 |
Q |
| |
|
||| |||||||||||||| | ||||||||||||||| |||||||| |||| |||| ||||||| |
|
|
| T |
41146194 |
acgttaacgtggttttttgccgtgatttctatcaaactccgttttgcaaacacaatgccaaaca |
41146131 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 11246946 - 11247106
Alignment:
| Q |
19 |
tttggtttcctgtttgcaacacacaatagcacgtttgtacatttttcgatgtg-ttttgtcgtaattttcagaagcttcaaatactaacttctacgctaa |
117 |
Q |
| |
|
|||||||| ||||||||||||||||| | ||| |||| || || | ||||| |||| |||| |||||||||||||||||||| || ||||| |||||| |
|
|
| T |
11246946 |
tttggttttctgtttgcaacacacaaaaacacttttgcacgattcccaatgtgtttttatcgtgattttcagaagcttcaaatattagcttctgcgctaa |
11247045 |
T |
 |
| Q |
118 |
cgtggttttttacggtgatttctatcaaattccgtttttcaaaagcaataccaaacagaca |
178 |
Q |
| |
|
|| ||||||| | ||||| || |||||| | |||||| |||| | | |||||||||||| |
|
|
| T |
11247046 |
agtagttttttgccgtgatctccatcaaacttcgttttgcaaacgtagcaccaaacagaca |
11247106 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 39396860 - 39396927
Alignment:
| Q |
72 |
ttttgtcgtaattttcagaagcttcaaatactaacttctacgctaacgtggttttttacggtgatttc |
139 |
Q |
| |
|
||||| ||| ||||||||||||| ||||||||| ||||| |||||||||||||||| | |||||||| |
|
|
| T |
39396860 |
ttttgccgtgattttcagaagctccaaatactagcttctttgctaacgtggttttttgccgtgatttc |
39396927 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 180
Target Start/End: Complemental strand, 32312960 - 32312798
Alignment:
| Q |
19 |
tttggtttcctgtttgcaacacacaatagcacgtttgtacatttttcgatgtgtttt-gtcgtaattttcagaagcttcaaatactaacttctacgctaa |
117 |
Q |
| |
|
|||||||||| ||| |||||| |||| |||| ||||| | ||| | ||||||||| | ||| |||| || ||||| || |||||| |||||||||||| |
|
|
| T |
32312960 |
tttggtttcccgttagcaacatacaaaagcatgtttgcatgctttccaatgtgtttttgccgtgatttccaaaagctccagatactagcttctacgctaa |
32312861 |
T |
 |
| Q |
118 |
cgtggttttttacggtgatttctatcaaattccgtttttcaaaagcaataccaaacagacact |
180 |
Q |
| |
|
| ||||||||| | |||||||| |||||| |||||||| |||| || ||||||| ||||||| |
|
|
| T |
32312860 |
catggttttttgccgtgatttccatcaaagtccgttttgcaaacgccgtaccaaatagacact |
32312798 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 5642645 - 5642554
Alignment:
| Q |
82 |
attttcagaagcttcaaatactaacttctacgctaacgtggttttttacggtgatttctatcaaattccgtttttcaaaagcaataccaaaca |
174 |
Q |
| |
|
|||| |||||| ||||||||||||||||||||||| |||| ||||| | ||||||| || ||| |||||||| |||| |||||||||||| |
|
|
| T |
5642645 |
atttccagaagtttcaaatactaacttctacgctagcgtgatttttgtc-gtgattttcattaaactccgttttacaaacccaataccaaaca |
5642554 |
T |
 |
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Target: scaffold0095 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0095
Description:
Target: scaffold0095; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 37941 - 37874
Alignment:
| Q |
72 |
ttttgtcgtaattttcagaagcttcaaatactaacttctacgctaacgtggttttttacggtgatttc |
139 |
Q |
| |
|
||||| ||| ||||||||||||| ||||||||| ||||| |||||||||||||||| | |||||||| |
|
|
| T |
37941 |
ttttgccgtgattttcagaagctccaaatactagcttctttgctaacgtggttttttgccgtgatttc |
37874 |
T |
 |
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Target: chr7 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 180
Target Start/End: Complemental strand, 10201504 - 10201341
Alignment:
| Q |
19 |
tttggtttcctgtttgcaacacacaatagcacgtttgtacatttttcgatgtgttttgtc-gtaattttcagaagcttcaaatactaacttctacgctaa |
117 |
Q |
| |
|
|||||||| | ||||||||||||||| | |||||||| || ||| ||||| |||| | || |||| || ||||| ||||||||| |||||||||||| |
|
|
| T |
10201504 |
tttggttttccgtttgcaacacacaaaatcacgtttgcacgctttctgatgtatttttgctgtgatttccaaaagctccaaatactagcttctacgctaa |
10201405 |
T |
 |
| Q |
118 |
cgtggttttttacggtgatttctatc-aaattccgtttttcaaaagcaataccaaacagacact |
180 |
Q |
| |
|
|||| |||||| |||||||| | | ||| ||| |||| |||| ||||||||||||| ||||| |
|
|
| T |
10201404 |
cgtgattttttgttgtgatttccaccaaaagtccattttgcaaatgcaataccaaacaaacact |
10201341 |
T |
 |
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Target: chr5 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 181
Target Start/End: Complemental strand, 15150882 - 15150773
Alignment:
| Q |
72 |
ttttgtcgtaattttcagaagcttcaaatactaacttctacgctaacgtggttttttacggtgatttctatcaaattccgtttttcaaaagcaataccaa |
171 |
Q |
| |
|
||||| |||||||| | ||| |||||||||||||||||| |||||||||||| ||| ||||||| |||||| | ||||||||| || |||||| |
|
|
| T |
15150882 |
ttttgccgtaatttctaaaagtttcaaatactaacttctatgctaacgtggttgtttgtcgtgattttcatcaaaccctatttttcaaacgctctaccaa |
15150783 |
T |
 |
| Q |
172 |
acagacactt |
181 |
Q |
| |
|
| |||||||| |
|
|
| T |
15150782 |
atagacactt |
15150773 |
T |
 |
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