View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10209_low_5 (Length: 367)
Name: NF10209_low_5
Description: NF10209
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10209_low_5 |
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Alignment Details
Target: chr3 (Bit Score: 309; Significance: 1e-174; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 11 - 355
Target Start/End: Original strand, 45675330 - 45675674
Alignment:
| Q |
11 |
gttggacaaacaagttcagaggaatccatgggaccagacacaggggccatttcgtaatcatctactatgtagtgaactcactcggtgcttatctctatat |
110 |
Q |
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| T |
45675330 |
gttggacaaacaagttcagaggaatccatgtgaccagacacaggggccatttcgtaatcatctactatgaagtgaactcactcggtgcttatctctatat |
45675429 |
T |
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| Q |
111 |
ttccccttcccaaagattttgtactgtgttttctcttattctcaattgaagaaaggagtatgtaaaaactttaatatttcatctaatgtaaatgtgagta |
210 |
Q |
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| T |
45675430 |
ttccctttcccaaagattttgtactgtgttttctcttattctcaattgaagaaaggagtatgtacgtactttaatatttcatctaatgtaaatgtgagta |
45675529 |
T |
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| Q |
211 |
ttttaatttaattttacatactccatggctagtaccatatgctgcttgagtgtatgtttcgttcactttgaagggatcaaaatcgacggtagagatgtta |
310 |
Q |
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| T |
45675530 |
tcttaatttaattttacattctccatggctagtaccatatgctgcttgagtgtatgtttcgttcactttgaagggatcaaaatcgacggtagaaatgtta |
45675629 |
T |
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| Q |
311 |
tattgattttgatgtgtttgattgttttaaagtagatttggtgta |
355 |
Q |
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| T |
45675630 |
tattgattttgatgtgtttgattgttttaaagtagatttggtgta |
45675674 |
T |
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