View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10210_high_9 (Length: 237)
Name: NF10210_high_9
Description: NF10210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10210_high_9 |
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Alignment Details
Target: chr3 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 46228167 - 46228320
Alignment:
| Q |
1 |
tgtatacattgcacactcttccatacgtcttc--------atctacattttattaccagcaatgtctattttgtttcttgcctttccttccattcccacg |
92 |
Q |
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| T |
46228167 |
tgtatacattgcacactcttccatacgtcttcatgacttcatctacattttattaccagcaatgtctattttgtttcttgcctttccttccattcccacg |
46228266 |
T |
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| Q |
93 |
cagaagccagctcactttccattatcaatatttatgatcgtttaaccttatata |
146 |
Q |
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| T |
46228267 |
cagaagccagctcactttccattatcaatatttatgatcgtttaaccttatata |
46228320 |
T |
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